<?xml version="1.0" encoding="UTF-8"?>
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 xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEL0</accession>
    <name>A0ABV2AEL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Crooked neck-like protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">CRNKL1_1</name>
        <name evidence="9" type="ORF">MHBO_000147</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the crooked-neck family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055430">
        <property type="entry name" value="HAT_Syf1_CNRKL1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045075">
        <property type="entry name" value="Syf1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246:SF3">
        <property type="entry name" value="CROOKED NECK-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23231">
        <property type="entry name" value="HAT_Syf1_CNRKL1_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Pre-mRNA-splicing factor Syf1/CRNKL1-like C-terminal HAT-repeats" evidence="8">
        <location>
            <begin position="6"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="domain" description="Pre-mRNA-splicing factor Syf1/CRNKL1-like C-terminal HAT-repeats" evidence="8">
        <location>
            <begin position="240"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="196"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="594" mass="69889" checksum="36E1469BBA16CF60" modified="2025-10-08" version="1">MEEKLKNIDKSRQIFERWMKWNPPPSAWESYIKLEMRCGGNLKNRTARARKIWTKFCAARPSVDSFLKWAKFESKFGQLEHARAAFASALEMLGEKAFDVHFFSEFAALEARAGETEKARKIYRFALEKLQMSQAAAAELFANFDKFEKQRGSRKDVDDLVFQKRRFEIENKLKERPQDYDAWFDLIKLFESNADSPYSNQSPKNKSHIISEKSPKNKSQKISEQFSDEEEKSREKIKLEAIEIYERAVAAVPPADEKRLWSRYIFVWIRYAIFCELKLNDLERARAVYRKALRVVPHEKFTFAKLWLLAAQFEIRFSRARKSEAVLAGTRKMLGEAIGRCPKLKLFRGYIEIETKLFAIKRCRKLYEAMLRFAPENCEAWHSYAAMESALGEIDRARAIYELGVNQDALDMPERLWAHYVDFEVDLTKNELNNINEKNEISELFERLLKKTKNIKVWLNFAETFRKLGDLAKTRSVFGRADEWFKSEGAVSNIPRAELLRKWLDFERNELGNLQKFGDGMVRADTNKQRERVEELERKQPREVRRRKALIDPARNEAGHEDYVDYIFPDAKDAQTANLKLLSMAHKWKKSKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEM2</accession>
    <name>A0ABV2AEM2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">UTP-monosaccharide-1-phosphate uridylyltransferase</fullName>
            <ecNumber evidence="6">2.7.7.64</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000157</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a monosaccharide 1-phosphate + UTP + H(+) = a UDP-monosaccharide + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:13205"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:140358"/>
            <dbReference type="ChEBI" id="CHEBI:140359"/>
            <dbReference type="EC" id="2.7.7.64"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the USP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.64" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000020">
        <property type="protein sequence ID" value="MES1918146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039741">
        <property type="entry name" value="UDP-sugar_pyrophosphorylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002618">
        <property type="entry name" value="UDPGP_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11952">
        <property type="entry name" value="UDP- GLUCOSE PYROPHOSPHORYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11952:SF9">
        <property type="entry name" value="UDP-SUGAR PYROPHOSPHORYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01704">
        <property type="entry name" value="UDPGP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00038047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00039080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="621" mass="69957" checksum="8F6F6ACA562F5D77" modified="2025-10-08" version="1">MVEKIKSLIDYQNLNDTERKMIKVLEKSAQTHLFEGWKNGEDELLKKQFLEQCAHLNNVHDGGLEGYYNKCRELLSKSAKGENLLRGWVPSVPKSHMVEFASEKFSRLEKMGLEVLGKTAFVLVAGGLGERLGYSGIKLNLCCNLLNEDSFFAMYAKYILAYQKHAREKNDPSLTLPLAIMTSDDTHSKTIEMLNKNNYFGLSRDQVTLLKQEKVPAVTNLKAEFSRRSKYRIETKPHGHGDVHSLLYKSVLRKWQRSGIENVLFFQDTNILVFKALPCLAGNSLEQSIDVNFMVLPRKPGEAVGSICRLKKADGKTMTCNVEYNEFESLLQKTGVKDHKNKNGFSSFPGNANVFILKMDKYLETLAKTDGKMPEYINPKYANKEKSIFKSAARIECAMSDYSMLLESDDNVGCTLFERWMSFSAAKNNMADAIAKKRLVNFSESAASAEADLYLANRRYLRQCGCDIEVTAGTKIFNGLESSDGAMVLLEPSFGCIFEEIKKRFESPQKVSVTKRSSLLLCGNVQIRKLVLDGSLSIASRKTGDGIDNAVIEDLSVSNEGYVFEEARDCDPEEIILRGYKLSKKANCDMLVDEGRTYKNTNKLFVTIDNRKCQIILITSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP8</accession>
    <name>A0ABV2AEP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000174</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000022">
        <property type="protein sequence ID" value="MES1918163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="495" mass="56880" checksum="B0E3CFAC8A6CEFA6" modified="2025-10-08" version="1">MEIPPVTKTGKANLKYLKEQFADFSGHHFVVYYNYLNAKNCIMEVAIFNNNPYLLVNGICSVKLIRYIKHFGTTFYIPKIRGFSNFNEIHNRVTLWYDVCKGGTLIDHLSAFNDENQFDKLWYSLQSLIKCFSDKEIVLDSLKIVDFGFDASGNLCLTNLTAITEIRDDNAAMKNDLNLMRMLTKILELNPKLNTRIKNIIDGFQYFIDHNHNTAVFLNCSDPPLPTLNVEKYTKYVLGCSFGYELDLGLWKIVDQLKSLEYSNISQNLDSTNRMVEYNGEIFFVSSDNSNLNTEIVSLVLNELNPYLTLSGYSFNERKELCLWHKFPKGGKLTSQNLARADVTTLKKIILCMAELILIFSQQNIFVENLSIGDFCVHQDGYLCFYSVSKLYTSTNIGRLATFEKLSMALSSLKNPLKTFLGMLRLGRKLIYFCKYIKNIMLLGQKLNLVKGIDMKHLKTGKMEVFKEVKDCYNDISKKPSTVKVSISDIKYLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AES8</accession>
    <name>A0ABV2AES8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="entry name" value="Collagenase (Catalytic Domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6832" checksum="8AB7F50625177AAF" modified="2025-10-08" version="1">MYPGIYDNEQITSTIIITRCNFGQVLGTAIIGSLCKKNSVSIVKDSDLFDITLMHEVFLYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEV8</accession>
    <name>A0ABV2AEV8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Origin recognition complex subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ORC1</name>
        <name evidence="5" type="ORF">MHBO_000221</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">ORC is composed of six subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the ORC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050311">
        <property type="entry name" value="ORC1/CDC6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10763">
        <property type="entry name" value="CELL DIVISION CONTROL PROTEIN 6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10763:SF23">
        <property type="entry name" value="ORIGIN RECOGNITION COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU365058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="14498" checksum="12E64BE85C58FADA" modified="2025-10-08" version="1">MAKSKINRIAKKSSLAKLSASYKFGKLVCRESEIQKLDAILKNALSMKFSSGSGLCFFAVIMVRLDISGMPGTGKTTVVSYVINGLGKMATKGDLPNFLYINVNAMKLMSPSQIYMTILLYLNKTGKRCLGTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF07</accession>
    <name>A0ABV2AF07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DnaJ-related protein scj1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SCJ1_2</name>
        <name evidence="2" type="ORF">MHBO_005278</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050817">
        <property type="entry name" value="DjlA_DnaK_co-chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24074">
        <property type="entry name" value="CO-CHAPERONE PROTEIN DJLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="7"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13934" checksum="C9132FE1966EBFD3" modified="2025-10-08" version="1">MVESINSYYDVLKVSRSATKSEIKDGYKKLMLLYHPDKSPNCENAKILKIIEAFSILNDDQKRKEYNASLKMAENKNLKNLRFSQNLENSERMKFEQICRFFIFRILKRKFLDVVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF27</accession>
    <name>A0ABV2AF27_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MCM DNA helicase complex subunit mcm6</fullName>
            <ecNumber evidence="3">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">MCM6_2</name>
        <name evidence="3" type="ORF">MHBO_000267</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000036">
        <property type="protein sequence ID" value="MES1918280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041562">
        <property type="entry name" value="MCM_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF43">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17855">
        <property type="entry name" value="MCM_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM AAA-lid" evidence="2">
        <location>
            <begin position="46"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="183"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="235" mass="26190" checksum="1B441078F4E90E5E" modified="2025-10-08" version="1">MSRFDLFFVVTDTCDDDSDYGMARHILARHRGAPAALSAPYGPAALANYIRYARSIRPAFPSAAMKLVVQSYCALRQSDSGGAKAAYRITVRQLESLIRLSEALARAELKDKVANAIEGAGEACPRGGEAAAQVDHPGAFRRRGAGRGRRRHLHERFCFHAKWQGARCPSSSSRRSRICWSTTSGERRNWPQSGEGSPSRSWWSGTWSTKRTRAIWAGRTRSRRRWRPPEPLSTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM9</accession>
    <name>A0ABV2AFM9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Exosome complex component CSL4 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000249</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000033">
        <property type="protein sequence ID" value="MES1918254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039771">
        <property type="entry name" value="Csl4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019495">
        <property type="entry name" value="EXOSC1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12686">
        <property type="entry name" value="3'-5' EXORIBONUCLEASE CSL4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12686:SF8">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT CSL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10447">
        <property type="entry name" value="EXOSC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0271">Exosome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exosome complex component CSL4 C-terminal" evidence="4">
        <location>
            <begin position="99"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="20897" checksum="8641E3684806CF99" modified="2025-10-08" version="1">MADAKIVFPGQKLGTTTNFGAGKNTVQSQKHYVVATHVGQATLFKNKNNKTFIKVTTKGPSPIIPTKDDLVIGQIRKISSTNAILAISICNNKKCVNSLYGSIRMPDVRKRDSENVKIYKSFRPGDVVKAVVMSRGNQKYFYLSTAREELGVLVGMDEQGKVLERIGNELVDSAGNAVVGRKIAILHCDDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP9</accession>
    <name>A0ABV2AFP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000071">
        <property type="protein sequence ID" value="MES1918491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="26257" checksum="615539FF37429544" modified="2025-10-08" version="1">MGSEDRFKVFGIPFDNIDNFANSEILSVKAIFDMALILFEKNYGENDLAKFFEREKNLEKMAFLSQTGFTNLLFSFLQNESVLIRKQAIQIFTNSVQLLKILANIRRKFGKSELAENSLIDKMNVILSKELNLDNERILVLEIQKMAAFFDLGEKANLVLQNRQIENCVVNFLLGILTLPFKNIWATAKNTLISMFRNLNFKTEKRGKRRFIEFGNKLFKISFDQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV5</accession>
    <name>A0ABV2AFV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MMS19 nucleotide excision repair protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MMS19</name>
        <name evidence="4" type="ORF">MHBO_000506</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into apoproteins specifically involved in DNA metabolism and genomic integrity. In the CIA complex, MMS19 acts as an adapter between early-acting CIA components and a subset of cellular target iron-sulfur proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the MET18/MMS19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000082">
        <property type="protein sequence ID" value="MES1918551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039920">
        <property type="entry name" value="MMS19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029240">
        <property type="entry name" value="MMS19_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12891">
        <property type="entry name" value="DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12891:SF0">
        <property type="entry name" value="MMS19 NUCLEOTIDE EXCISION REPAIR PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14500">
        <property type="entry name" value="MMS19_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MMS19 N-terminal" evidence="3">
        <location>
            <begin position="68"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="11"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="601" mass="69528" checksum="6E841D53A2BC7A21" modified="2025-10-08" version="1">MLTPKKLKMSLETNSENNKMSPKITKNTKSGNKILTEIIEKISVCFEEIRNLNREKISDKPFLFEKSSLIEKIKNISFSNADNTTLINFFSEHVNEINVGNFVLSITKSFLNFGHFDQKNIQSLLKMLSKINLAVILRSGRQDLYTILSILLKSHFELNWDKNELITIYMTTMEEETDPSCLLKSFECFKLVIKTCKNSISEKTKKDLFSLIDRYFPINYQSENEDENLKTNLIKAFRECLTCDPLFVSLSFDFFCEKLCSLQNLEECNESALILTIFLQKYSYFVTKKFLRIAFDSFLETFKDDLSNEELQILCLNGIKIVAKKFFGISIFKSKSEFDIEKEISDLFQVLKMNKDSSSPEVTILIQIAESCSEANNIIMKQGWDELKRIFYTKEVHFPRLEGFMQVFYGAIDSNFANLAKTKILADNEKDICELFRSGLIGASPDVRALSLATLFKLSQIFSETFPKSNFFENQNIVTMATSLMLKDEAVSVKRQAAKSLLEMTAYHFSKNENNIRKDISYVKPEIWPFLVEKITTQQNCDETTTKVIEEFLQNSSNLHWSIYDTIFDSFIKTCLDFRYKENQMFVSKIFAVFAGITVSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG20</accession>
    <name>A0ABV2AG20_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transcription factor CBF/NF-Y/archaeal histone domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000577</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NFYB/HAP3 subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000098">
        <property type="protein sequence ID" value="MES1918636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003958">
        <property type="entry name" value="CBFA_NFYB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027113">
        <property type="entry name" value="Transc_fact_NFYB/HAP3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11064">
        <property type="entry name" value="CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11064:SF9">
        <property type="entry name" value="NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00808">
        <property type="entry name" value="CBFD_NFYB_HMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00615">
        <property type="entry name" value="CCAATSUBUNTA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Transcription factor CBF/NF-Y/archaeal histone" evidence="5">
        <location>
            <begin position="2"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8971" checksum="F502AE26D4BCDD0C" modified="2025-10-08" version="1">MLQGYASEFINFVTSDAVARTIREKRRTLTGEDILYSMRCLMFSDYIVPMEIYRNKIKYVVDFQKKIDAEAEDMSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN0</accession>
    <name>A0ABV2AGN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000738</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000136">
        <property type="protein sequence ID" value="MES1918840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10516" checksum="AC174621ED663043" modified="2025-10-08" version="1">MMHGQQIGNDVGTTLRTKVDVGVAEVESLAVDGAHGHTKVVVVREFDRRSDDGLFPFVQFFASFENQSDLVYKLVPFGDDQIVRENAVQQIVFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN2</accession>
    <name>A0ABV2AGN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000742</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000138">
        <property type="protein sequence ID" value="MES1918845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="127"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19511" checksum="E0FF0CE90E2E196F" modified="2025-10-08" version="1">MSSMITAEGILNSAFDFIFPDNVVLQPGRYRWEITCASLHALILRSTENRIEAGGFFLERNGSRKTAFDLYNGEPFFSLIMEARSLRQKNFNSKLRRSLDLTHSQMENCDTYVFERFAVERSMGSFVERIKNVNKEFEEIIMNLKKMCKVLLNRKLFIELGFLRLSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT8</accession>
    <name>A0ABV2AGT8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000552</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000093">
        <property type="protein sequence ID" value="MES1918608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="25311" checksum="422702ADFF2F96DE" modified="2025-10-08" version="1">MLEKCPSLDLSNTNIITRGCDLTRQIHSGKVCHLICSTAPFENLYLSQVTIHCIEGTWQQLRSDIERYFPFDFHSLRCSGRPRVAIAGFGKSCCGLPYLEHGKFTGNGCVEQAAHGERCSFSCSEHLTASPTNTEECPVEEGVIECLNGQWQQPFCIDPQTTREVSCAQTKISPCAIQKEVQCSGKKVSACETAKNNVVALNRQCAAKKICNAKKVQSICQAKKMKSGLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH82</accession>
    <name>A0ABV2AH82_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000841</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000165">
        <property type="protein sequence ID" value="MES1918957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="entry name" value="Chorismate lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="Chorismate lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="22501" checksum="C06885C1C1F1CEC1" modified="2025-10-08" version="1">MSYAKENINLPSLEDPNLVQTADLIWNSDFFKNMESFLENGASEINKSIEPVQIISKEEIPTELSKLLVNKDYMTSTLSLFYNSKINIEKIKKTEENDILKRSVKLNNGKECLALGFIKILLNNLGSENVRHQVVGETAPFGTILKDHGFKYGYRERIYIKLPKKDSLFKTDLFGRATIMEGNGVVVATVAEILPYYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF7</accession>
    <name>A0ABV2AHF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gtf2a2p</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gtf2a2</name>
        <name evidence="2" type="ORF">MHBO_000964</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000198">
        <property type="protein sequence ID" value="MES1919097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10014">
        <property type="entry name" value="TFIIA_gamma_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.190">
        <property type="entry name" value="Transcription factor IIA gamma subunit, alpha-helical domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009083">
        <property type="entry name" value="TFIIA_a-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003194">
        <property type="entry name" value="TFIIA_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015871">
        <property type="entry name" value="TFIIA_gsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015872">
        <property type="entry name" value="TFIIA_gsu_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10966">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02268">
        <property type="entry name" value="TFIIA_gamma_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47396">
        <property type="entry name" value="Transcription factor IIA (TFIIA), alpha-helical domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription initiation factor IIA gamma subunit N-terminal" evidence="1">
        <location>
            <begin position="8"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11979" checksum="6708438DBA639D64" modified="2025-10-08" version="1">MNNFSNSNIFRKSSIGKCLEETLSLMNRKEELPEDVNSLILSHFEKSISFHLKNSAKLPFVDSIGGLKHYQRCDNDWKLQLENAEFVTEGGEIVRSSKIDVFGVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI9</accession>
    <name>A0ABV2AHI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000209">
        <property type="protein sequence ID" value="MES1919146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="40189" checksum="BEC80DA811640C22" modified="2025-10-08" version="1" fragment="single">MVFSRRSLALNYLSTQTNKRSFSDIKKAINAAVATGISVYHPLIETAKLVLLEMVCAEKVEMIEKTKDHMKVKNVYDSLKTNYKKQITRPHFPKSKKVIAFLSTIKAHWNRLKNASEIAMLSEAKKALKFENKKKVDELIRRIEQEPNEKFTKVLSSLKSFKTDLVKVERRQRAERRKTNEQIVKDILLGIIADKCGAERKTKATNRFYVKGNSETVLGDDCEQQENVGNVEDGREGENKKSDYKNIEQTSGDKRFFCYNSSGKKHFGDGERDRNFKEAVKKTYAKNFRKDRQIRNSLPQTLASKEASSALNSTFPAASKSCYRKNALRNIDKNRVYMRRTCTFGKKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK9</accession>
    <name>A0ABV2AHK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000657</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000116">
        <property type="protein sequence ID" value="MES1918742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="23516" checksum="6A710D1AEC2FEAC4" modified="2025-10-08" version="1">MLKMLLMKRFVGAGKKVMINNRKKLHFRLFSKKSLKSILKSPKQTTKRNLSKSEISGIRKSIVWYLIVLLWLAYFRLVLVETNFYEFALTYLAEKRVEKIQISDKAAFVLIKKESDLSQDEILSNLRKVKNIFDEKIHKERKIFYKRGSFVHKPLRLQGKYHVSFKIDDKQSFQKYMNYLQNAIFDKNEDKIVVEDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ8</accession>
    <name>A0ABV2AHQ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001063</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000224">
        <property type="protein sequence ID" value="MES1919200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="21619" checksum="16A085DF2F11FD5C" modified="2025-10-08" version="1">MRSLSFYKNINLNSLELHFIGQTTKSKKFPVYISIRLFENLRANSESSRKNHYFLIKQKRFHIVLKIFDLKTSNKHVLVRFSDAKKFFFFRVDTTRVDKFNFTDFYEPGKVYELKLFVNGSKKLVMYFVLPLSIIVIVALIVTILVVLTSKYKRKSFILYEKNKSDLETKEYLIDLIKFKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR6</accession>
    <name>A0ABV2AHR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001078</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000228">
        <property type="protein sequence ID" value="MES1919217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046160866" evidence="1">
        <location>
            <begin position="19"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16210" checksum="1BC2D03AC730C0EF" modified="2025-10-08" version="1">MSMFFLLANLLQFAPYLAQTKSNHCKVEIDDRIYKNTIKTRFWLKTGTFLYLACRFSQTKVVFRCEEIDFKPTLTKTSECPYPICEKIGNAVSYECTDGDCEKKVSKEFDVNFNHTLIIPRIAKIACKPNGTVKMEYSYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV3</accession>
    <name>A0ABV2AHV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000240">
        <property type="protein sequence ID" value="MES1919256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sushi" evidence="2">
        <location>
            <begin position="12"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9266" checksum="8EF2DE514C93B33F" modified="2025-10-08" version="1">MNGDFLEWVGKSECELIEDECPELEDGFWGSVKIKSYSLGSVLELSCNKGYSLTLEPADCILNLENNAIWNPDKASICSSFRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY5</accession>
    <name>A0ABV2AHY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">DHX33_1</name>
        <name evidence="6" type="ORF">MHBO_001134</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000244">
        <property type="protein sequence ID" value="MES1919275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011709">
        <property type="entry name" value="DEAD-box_helicase_OB_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF118">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07717">
        <property type="entry name" value="OB_NTP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box helicase OB fold" evidence="5">
        <location>
            <begin position="61"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16883" checksum="084FDDBFC6DC5BDA" modified="2025-10-08" version="1">MLTMIEIFEEFERQRESKNWCYKNCINRKMILKAKKIRKQLRQYINCKKSQNDNEKDENAVRKSLSTGFFVNIAILKSDKSYKTLINNQTVKIHPSSVFHGRKPECVLFSELIKTKICYIKNLTLFDRKWLTEVAPFYFES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI96</accession>
    <name>A0ABV2AI96_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">mRNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">NPL3</name>
        <name evidence="5" type="ORF">MHBO_001235</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000276">
        <property type="protein sequence ID" value="MES1919396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050374">
        <property type="entry name" value="RRT5_SRSF_SR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23003">
        <property type="entry name" value="RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="4"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="74"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="240"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="77"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="240"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="267"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="283"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="341"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="372" mass="44762" checksum="AD24C9DF37644BEB" modified="2025-10-08" version="1">MTNNRIFIGNISSRTTKKDLFNNFEEFGEILRCDLKDKFAFIDYDSSKNCQDAIDRMHRTDLLGRQIIVEMSHGNKQRSDGFRGGYRDEYRRNDHDDRRDRDRHHDDRRSRHYDDRRDRDRHYDDRRSRHYDDRRDRDRHYDDRRERSRHYDDRRERHYDRKSHYESDSRNFKVKTSNLTSRVSWQDLKDFARDNIGPSVARTNVWSTRSGNFGVIELTDRGDYDYALKQLQNKEIDGQKVEFSEFTREDEDERRNEGDRHPRRGISRSARMSESKSSGRSRSRSESSKRSNDRSDRRSFPSEAEEKSEDNKSGNENDNSENENNDKNKNGQIENNDQIENGEKKNENGEKRSRSKSEENENVKKLKESNEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA8</accession>
    <name>A0ABV2AIA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001243</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000279">
        <property type="protein sequence ID" value="MES1919405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045217207" evidence="1">
        <location>
            <begin position="24"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21304" checksum="B9868C4EC24FDDC2" modified="2025-10-08" version="1">MAKSFTKMIICYFVLFLASFVLPSKHVFEKMAIEGFPESLDFEPMRKSPENEEEQSAISYSLEFEGSPGHSVFFVLGRREDLNDGVICASKELKEILPLADSKMKIITIDLENGYKKIEGKYVIEEDSLYTFIFVSCEKENFLYKESKPITVSGQVSLRGPYGFLPPHKQRLVNMVYNIFNILLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB8</accession>
    <name>A0ABV2AIB8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001258</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bZIP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000283">
        <property type="protein sequence ID" value="MES1919420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47416:SF8">
        <property type="entry name" value="BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR E-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47416">
        <property type="entry name" value="BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="8">
        <location>
            <begin position="6"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="17072" checksum="6871208331EBEF5E" modified="2025-10-08" version="1">MKSSADEKERKRLERNRLAARASREKHKKYVQELETESGKMRTSIFILQKKIDELRYENAMLARRVMNQGQQRFCLQCREGVSRDGDEGQNNHLAEQQYYERLDMHSQMFRARSTVNERGYGNVYKNMNVGQSYLSDEMFQDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK1</accession>
    <name>A0ABV2AIK1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NAD(P)H-hydrate epimerase</fullName>
            <ecNumber evidence="3">5.1.99.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001282</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6R)-NADHX = (6S)-NADHX</text>
            <dbReference type="Rhea" id="RHEA:32215"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:64075"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(6R)-NADPHX = (6S)-NADPHX</text>
            <dbReference type="Rhea" id="RHEA:32227"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:64077"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.99.6" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000292">
        <property type="protein sequence ID" value="MES1919452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10260">
        <property type="entry name" value="YjeF N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004443">
        <property type="entry name" value="YjeF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036652">
        <property type="entry name" value="YjeF_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032976">
        <property type="entry name" value="YJEFN_prot_NAXE-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13232">
        <property type="entry name" value="NAD(P)H-HYDRATE EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13232:SF10">
        <property type="entry name" value="NAD(P)H-HYDRATE EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03853">
        <property type="entry name" value="YjeF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64153">
        <property type="entry name" value="YjeF N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51385">
        <property type="entry name" value="YJEF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0630">Potassium</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YjeF N-terminal" evidence="10">
        <location>
            <begin position="9"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="10886" checksum="83F39FE84AB220A6" modified="2025-10-08" version="1">MQYLTQELSKQLDLKLFKIGFSIEQLMELAGLSVASAIFRHFKTKNSPKKVLFVCGPGNNGGDGLVASRHLSNFKTFRPSIYYPKPNLERKDFAVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIL3</accession>
    <name>A0ABV2AIL3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Non-canonical E2 ubiquitin-conjugating enzyme C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001334</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000313">
        <property type="protein sequence ID" value="MES1919516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018553">
        <property type="entry name" value="E2_Ub-conjug_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057668">
        <property type="entry name" value="E2_Ub-conjug_enz_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31560">
        <property type="entry name" value="UPF0652 PROTEIN C16A11.03C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31560:SF0">
        <property type="entry name" value="UPF0652 PROTEIN C22H10.08"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09418">
        <property type="entry name" value="DUF2009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Non-canonical E2 ubiquitin-conjugating enzyme C-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25870" checksum="344B442C132C68D1" modified="2025-10-08" version="1">MEKRFSLAIRYGVEGTRLTHDHRKQYCFVKQTLLLWREILNNFFKLWHFAEKDMLSGNPYELTDTGQGLQRIQRCNNVGREMRQILAKVKNKVSSWVGSSVIHLGDHNVPNSFIFIDKYSQISRILNPVVLTIERINEISDNKPLSRYIKKQFGSAENLKMDILTDFFRHAFDGSGADNFYDAGSCIDGRLTSLWNWGQNIAKKPFYPIFLLTGFSSFDGDWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIM3</accession>
    <name>A0ABV2AIM3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RCC1-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001192</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000261">
        <property type="protein sequence ID" value="MES1919344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058923">
        <property type="entry name" value="RCC1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF408">
        <property type="entry name" value="OS09G0560450 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25390">
        <property type="entry name" value="WD40_RLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00633">
        <property type="entry name" value="RCCNDNSATION"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00626">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="24"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="domain" description="RCC1-like" evidence="3">
        <location>
            <begin position="26"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="76"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="127"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="181"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="238"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="295" mass="32002" checksum="C1A371FDAA7C6745" modified="2025-10-08" version="1" fragment="single">MLKFRCFRRMNGFKNYRSFANSKTNLYLWGSGKSGSLGNGHSDDVPVPMKLEMPKNERFESISFGSLHTALLTKSGKVFTAGSNLNGQLGIGGTSEKVEAFQEVKNIEKITSIACGEKHTLALDIKGQAFSWGFGGSLFSAGALGTGQKQSHDTPTRVKQPEPFHSIAAGSLHSLALSKTGKVYAWGSSERGALGVLGSQSFFLSGLLSPTSIDYFARHKIERIFARSKVSAALTDDGKLFMWGSNDKHQLGVESVNVEIQSCENVPVHIEVDSEKYKLTIQKLGLSAKKCMAIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ1</accession>
    <name>A0ABV2AIQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">U6 snRNA binding, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">TTC31</name>
        <name evidence="9" type="ORF">MHBO_001360</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000323">
        <property type="protein sequence ID" value="MES1919549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039171">
        <property type="entry name" value="Cwc2/Slt11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048995">
        <property type="entry name" value="STL11/RBM22-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14089">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR RBM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14089:SF6">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR RBM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21369">
        <property type="entry name" value="STL11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="8">
        <location>
            <begin position="164"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="7">
        <location>
            <begin position="235"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="6">
        <location>
            <begin position="164"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="381" mass="43045" checksum="59537E4C85FF3A0B" modified="2025-10-08" version="1">MGDDKIDFPILCETCLGDNPFLRMVLKLKLKTRTDFGQSCKICDRPFTIYRWRPGVKARFKKTQICRTCAQLKNVCQTCVLDLQFGLPVQVRDKAMAETAKIDIPVNVPNRDFQFENLESKMEAGGAAAALGLPEGSNPYSKASAFLSSLSRKRPYYTRNLPHLCSFFQKGECKRGSDCPYRHERDEYPEELRNQNIKNRFYGVDDPVAKKLLRARRGDDNERSDIEPPTDKNITTIFVGGVDGSTEENDLSKMLKKYGEITKIALKPDKGCGFVTFGNREDAEEAIEKLNGQLIIGDTKYKINWSKTTNNQNIEPTYNFAMPPGMKSLPKSYYDPIEKRKVNMPNPPQGISIPGDDNFSYPSMNPLNYAASIGHNDNSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR7</accession>
    <name>A0ABV2AIR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001127</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000243">
        <property type="protein sequence ID" value="MES1919268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12431" checksum="ED2BFE17C60DF3CF" modified="2025-10-08" version="1">MIPVRATEKKCRGTENYCAIFAETEGRTCKEYCEAKNTMCIASFNEINDSCREKGEDTKCASKTDDQICFCHLDFLTLFPRKKEVLKEKMIDKIIDKIFASLALTDRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ02</accession>
    <name>A0ABV2AJ02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DiGeorge syndrome critical region protein 14</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">DGCR14</name>
        <name evidence="5" type="ORF">MHBO_001450</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ESS2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000357">
        <property type="protein sequence ID" value="MES1919655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019148">
        <property type="entry name" value="Nuclear_protein_DGCR14_ESS-2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12940">
        <property type="entry name" value="ES-2 PROTEIN - RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12940:SF0">
        <property type="entry name" value="SPLICING FACTOR ESS-2 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09751">
        <property type="entry name" value="Es2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="279"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="279"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="355" mass="39841" checksum="A4BA15A801A2DAE5" modified="2025-10-08" version="1">MDDENGIKILTDDEYAEQMNRIIKRDYFPYQETLRRKNDLLKELQNSSAVYENNDKILTPTPTPILPKIDKDENAVSAKNKSLDDFARSNASSDELAFQKIVAKNNRELAAKFWWVENNSSVRGQTLALPSAGRKLFLEAKKNAPDWTENKSVARNSDEEPMQVSRKNHLMFMSSEPAAIEEGFVKAKKASFRSENTRFKTPTARENSESKIDRIEQNGTPSVGGFRLVESTPQIEPSAGNVSPLVTWGSIQNTPLRLEDEDDLESKRVFKMFEKSRKEKAHHSLAKKIKKARNGRNGTPLSTPGKFAGVSMSPFGGLSPAGMRMLQMTGRGGRSVGEDLRKSYGHTPFTPKIKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ46</accession>
    <name>A0ABV2AJ46_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA replication complex GINS protein PSF2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001467</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="5">Component of the GINS complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the GINS2/PSF2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000364">
        <property type="protein sequence ID" value="MES1919678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd11712">
        <property type="entry name" value="GINS_A_psf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd21694">
        <property type="entry name" value="GINS_B_Psf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.5.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021151">
        <property type="entry name" value="GINS_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036224">
        <property type="entry name" value="GINS_bundle-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007257">
        <property type="entry name" value="GINS_Psf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056784">
        <property type="entry name" value="PSF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12772">
        <property type="entry name" value="DNA REPLICATION COMPLEX GINS PROTEIN PSF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12772:SF0">
        <property type="entry name" value="DNA REPLICATION COMPLEX GINS PROTEIN PSF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25005">
        <property type="entry name" value="PSF2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05916">
        <property type="entry name" value="Sld5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028998">
        <property type="entry name" value="GINS_Psf2_subgr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158573">
        <property type="entry name" value="GINS helical bundle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160059">
        <property type="entry name" value="PriA/YqbF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA replication complex GINS protein PSF2 N-terminal" evidence="7">
        <location>
            <begin position="12"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="GINS subunit" evidence="6">
        <location>
            <begin position="75"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR028998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF05916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF25005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21950" checksum="97A2D944596B8CC2" modified="2025-10-08" version="1">MNRNKVEEEQFTVKEIEFFAGDTPIMIIPLFNGDKLDFISNEYGPFRVNVPTEVPLWLGMKLKKQQKCRIIAPNWFSEKLLVEKLQSEREKTSEFAEIHWHYIEITKILFQNAQDDIENAEKVRSLIKSIEETREEKIRLGLKAVDHSTTFIAVNNISCMELNRIRFYASKILDEFKKFQDAIKSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI5</accession>
    <name>A0ABV2AJI5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fumarate lyase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001591</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000414">
        <property type="protein sequence ID" value="MES1919832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.200.10">
        <property type="entry name" value="Fumarase/aspartase (Central domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="entry name" value="Fumarase/aspartase (N-terminal domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047136">
        <property type="entry name" value="PurB_bact"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43411">
        <property type="entry name" value="ADENYLOSUCCINATE LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43411:SF1">
        <property type="entry name" value="ADENYLOSUCCINATE LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="L-aspartase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fumarate lyase N-terminal" evidence="1">
        <location>
            <begin position="40"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="290" mass="33660" checksum="BA61AD9ECC056CFA" modified="2025-10-08" version="1" fragment="single">MTAIFLKFCNNNFNKLQKICRFRRSFSTVHPLLAISPIDGRYRNKTEKLSKIFSEFGLIRNRVFTEIKWIKKLSTLSKTNEQIPVLSKNGENELKNIAENFSLKDAEEVKLIETKIKHDVKAVEYYLRNKFCKSEFLKPFDQYIHLFCTSEDITNVSYALSLKESREILIDRKSVILAQLEEMAFKYKDLAMISRTHGQAASPTTLGKEIAVFANRLNKQLSIFKKIPISAKFNGAVGNFNAHRLSMPNVDWINFTKEFIENDLELNCTYLTTQIEPNDMVSVYLDCLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS4</accession>
    <name>A0ABV2AJS4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000447">
        <property type="protein sequence ID" value="MES1919931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00030">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="32862" checksum="E4B85FE3925DA7A0" modified="2025-10-08" version="1">MVESHYLISAYIKKGSDLKFKDDRKGNPFCQFEVTGLRKLTEMRLRTSNPVWNERLDIVTDTKPKSALLVCKDFVDTKNHLEVGRAVIALDTLLHDGVDELTIPINRLDVAGTIEGKGEIGLNLNFKRIPSNRHHHFSWTHLLHFDIENIEDLPLYARCIEKGSELVLRVKFGIQQFATQFFDNTESGLDSSGFLFVDDESMRRDDLEFKLVIRRDETEHLIGQGRLAVEALFSDFEEQLKNKVVLTEKLKVGVNLQLAMLQATRNLKIFVISSLWVKFLFEDSPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK68</accession>
    <name>A0ABV2AK68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000502">
        <property type="protein sequence ID" value="MES1920076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="138"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="264"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="166"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="188"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="264"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="391" mass="44589" checksum="AA3A3544CC7980D8" modified="2025-10-08" version="1">MDFKSNKIQKSPEKPENKPSVFMRLSKLNAENPKMPPPPPPLIKVISNIPFLPPPPKIPIEGKSNFASLKKSNLDSNFDSNFTPNKKSNFNFTPNKIDSNFNFPQNKKSNFETNFVPPPLKISLPLKHIPQKQILLKTKKMRLPPETQQIPLPPPKPEALPNQKTPKTENRKTQPDDIKTVTENTPKRPPKKVLKKRGRPRKKPLLQKEYTPKDLKHTQNSPISITPLSAALQAHSGDSPKIEDLSNKNFILSDSNMCIDQLDDKAEQSEDRSDFGKPKRGFLQPTALSRPQRNRYYESKKPNIGKDHQIDIDSLPFPKNCDGLIKKWRKNHDSASKNGQLKILIREKLLSKFAILENENGIEDNVFEEDFTGKLMWKSGALEEAEGDFYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA1</accession>
    <name>A0ABV2AKA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001819</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic RPA49/POLR1E RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000513">
        <property type="protein sequence ID" value="MES1920101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009668">
        <property type="entry name" value="RNA_pol-assoc_fac_A49-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14440">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06870">
        <property type="entry name" value="RNA_pol_I_A49"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="28778" checksum="F44DC12FC15D92DE" modified="2025-10-08" version="1">MQKFLKKSISKIDGNEDDKYEEKVRRSFTYLPKYNMNAESDEAIFDFSDLLPENFDQNFAVKKISKILEKKAENCGLDEYPSFLREIMSFKDIKSDKAPILLYLKYLIRAFKLHRNEKEIFKFIGCPNNVGRKLIDRFKLGRDSDIKHRKKLFCHILVISMFLVEFKMNLREFDCLKKDLSLNNLAYFRSAIKISGFTENIVEVTDDQNDRSKIVISVKRPLYIWDSFSKPTFKRTRKKINF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA7</accession>
    <name>A0ABV2AKA7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">fructose-bisphosphatase</fullName>
            <ecNumber evidence="2">3.1.3.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001573</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FBPase class 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.11" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000406">
        <property type="protein sequence ID" value="MES1919808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00354">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.540.10">
        <property type="entry name" value="Fructose-1,6-Bisphosphatase, subunit A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000146">
        <property type="entry name" value="FBPase_class-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033391">
        <property type="entry name" value="FBPase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028343">
        <property type="entry name" value="FBPtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556:SF41">
        <property type="entry name" value="FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556">
        <property type="entry name" value="FRUCTOSE-1,6-BISPHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00316">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000904">
        <property type="entry name" value="FBPtase_SBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00115">
        <property type="entry name" value="F16BPHPHTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56655">
        <property type="entry name" value="Carbohydrate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Fructose-1-6-bisphosphatase class I N-terminal" evidence="5">
        <location>
            <begin position="9"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="29214" checksum="47E967437E7999B6" modified="2025-10-08" version="1">MQNPKSNPMTLTRWIIENQRKYAPSASGDLSILLTSIQLACKSISNNCNKAGIFNLYGTTGEMNESNDIVKKLDIVSNDIMINSLKFTGKTAIMASEENENVIHVEEGLRGKYAISFDPLDGSSNIDVNISVGTIFGIFECGQDGEPTEKSLLKKGRELVAAGYCMYGAATIMVISIGRGVEGFTLDNTMGEFVLTHPNMRIPEKSKRIYSVNEGNSANWDGAVSKFVKECHHPEVELIFFMDSRYNFLLLLIVFDLILRTCSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC6</accession>
    <name>A0ABV2AKC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001841</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000521">
        <property type="protein sequence ID" value="MES1920125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.20">
        <property type="entry name" value="ATP-grasp fold, B domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15871" checksum="0E56416A79EA24AA" modified="2025-10-08" version="1">MPFVEFAKYFKKNKNNERNLCFIEKQIVVALKRLVFNVFKENSEELKLKKYENYNFDLLGADFLITQDGEIFLLEVQYKPGLSFRKGSIGEGNKLLLREYFDILLKVRKNRILRKNGDDWVFPKYKKFLMIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL0</accession>
    <name>A0ABV2AKL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nuclear cap-binding protein subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">NCBP1</name>
        <name evidence="1" type="ORF">MHBO_001572</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000406">
        <property type="protein sequence ID" value="MES1919807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="7103" checksum="FFBB25278CAF0C6C" modified="2025-10-08" version="1">MNAIDKNEEFSRQDRIKALIVRFGEKSSVPLRVNVEMLSKALSKDLEQYKDFIVDILFQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX3</accession>
    <name>A0ABV2AKX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002008</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000611">
        <property type="protein sequence ID" value="MES1920326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="442"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="644"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="644" mass="76706" checksum="E1EF013FBD3B378A" modified="2025-10-08" version="1" fragment="single">LNNTGMCECQNIITKIEKIIKSKVKISSFLKNQTENISSKCEIEKCQLNFFKLIPKIIDPYFSLFANLKEMRNLDIFLKFVEKIFSPIENVSKESKNNFVQHFTNLSHIIAKIHWSLIKLNMNRELNNFSAEQIEDQLANFCQRIFSKFGKCSNFVEKWLQSQKTVELQPISIAFVLLVFLNRFPGKIYENRKILQICYNAMYLNSSFNHTYSVNNEIAKFTNLAKYENLPNFLIFWLDILFGITDFDQNLSERIFFATIFLKIYQKMDFCQQKQFVESLFAVAIKFSKTIRKDKYTKIMWIMSKIPNLALLNSNKLYKNFAFENNIFLRYNLSIFPKLAKFDLKFGDFSPIFANLMDEMTDYYLFKSDLVKKILNCNSLTIFRNRYNQKEMEKIFSVLKVLVIWQFRHNFKTKNIRLFEKLSKKCLNLAIFFEKDAKFRKIFFMLIVVCCFCIPLYTNHYFRNLRNLMVENIHSENIYLIYIKYFIPQIAIIPKLDKPNLKNGENSVISSFMINQNLFLFFSTTKIKNSEKIITELASFRQFLEKREKIESENLTKIRSFSKNDMKKALTDYESVNLRNELANFSNKNVKRENSILGIKSNLENFFRKENLDSLIVEMRTDKKDFSNFNQNLEFEEICFDKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL08</accession>
    <name>A0ABV2AL08_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002047</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000634">
        <property type="protein sequence ID" value="MES1920370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00180">
        <property type="entry name" value="PKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="33"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="36146" checksum="5723E33080C657EA" modified="2025-10-08" version="1">MESWIEHLHITSEELKNATCSWHENCEKSINDYEAVDVICKTATSTILKVKNKDEIYAVKCIDTTNDMRKFRAEVEVNNLSVLAGHENIVKCLHVFDTENHSLIFKELLMGDASDYKGEKDLNFYSVLGATVAEVLRFMHTKQIVYVDLKAENLMFDFTGKLKLCDFDLSYRTNIEYRIKLIKRGSRVSAAPEQSFGKCTNQTDWYCFGMTLWELLRGKTPNADFYGDDFWSDINENKADFFIFFDGFWGKVARLINKCLKNEPEKRLHLDDDKVFRQIKLFQNITEENIKKFQDDIVCGLLRKFLFLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM0</accession>
    <name>A0ABV2ALM0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002226</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000741">
        <property type="protein sequence ID" value="MES1920567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="122" mass="14996" checksum="C421267E717CCA00" modified="2025-10-08" version="1">MIMNNSTKYNILPNKKAPELTVQEKRTKFKIAARRFKEKRLRDIEKYENKIKTQLKKQKILNEQLKSIHCDSNYRYWVFSYKYDEMLTQAKYYRMQSIYLEKCIDEKISKTKKSCKSQNKKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX4</accession>
    <name>A0ABV2ALX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Threalose-6-phosphate phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">TPS2</name>
        <name evidence="1" type="ORF">MHBO_002320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000797">
        <property type="protein sequence ID" value="MES1920671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001830">
        <property type="entry name" value="Glyco_trans_20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003337">
        <property type="entry name" value="Trehalose_PPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788:SF106">
        <property type="entry name" value="BCDNA.GH08860"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788">
        <property type="entry name" value="TREHALOSE-6-PHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02358">
        <property type="entry name" value="Trehalose_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="24918" checksum="C7CC17F5655752E9" modified="2025-10-08" version="1" fragment="single">MENIFTNIPALLLAENGYYLKDNKRTKNWTKTQEMHLTWMDSAEKMVYYFVKRTPGSFIERLETSIYWYYAGCVGAFSEKQARDLIRNLQMGPLINTPTEVIHDQLNKFVKVQLIALNKSYAVKISLSYFHVLSKYEKDEKLSEQKFEFKSSSWIEHVFRNNGQKIIYAYEEIKKYNFILFVGNNFELEKDDYYLFNKKSTSKKNPLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ7</accession>
    <name>A0ABV2ALZ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nuclear migration protein nudC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Nuclear distribution protein C homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002303</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nudC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000787">
        <property type="protein sequence ID" value="MES1920652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007052">
        <property type="entry name" value="CS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037898">
        <property type="entry name" value="NudC_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025934">
        <property type="entry name" value="NudC_N_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12356:SF3">
        <property type="entry name" value="NUCLEAR MIGRATION PROTEIN NUDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12356">
        <property type="entry name" value="NUCLEAR MOVEMENT PROTEIN NUDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04969">
        <property type="entry name" value="CS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14050">
        <property type="entry name" value="Nudc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="HSP20-like chaperones"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NudC N-terminal" evidence="9">
        <location>
            <begin position="21"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="CS" evidence="8">
        <location>
            <begin position="102"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="64"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="74"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF14050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17261" checksum="4D647C0E27182C0C" modified="2025-10-08" version="1" fragment="single">MVSVENMSIDLLEQIYNDTKSNDKTTAFLEKVFGFLKNKTDFYDKKDNQKILLKLFDKTNDTKICNSKSRPKKPKTEKPKKIENNKEIGEVPPIGNGGKTDKYIWTQTLSETAVSLTFPKETRAKNLTVELQKSRLLVKLKNKEDFAIID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM50</accession>
    <name>A0ABV2AM50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Receptor expression-enhancing protein 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">REEP5</name>
        <name evidence="3" type="ORF">MHBO_002377</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000833">
        <property type="protein sequence ID" value="MES1920736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004345">
        <property type="entry name" value="TB2_DP1_HVA22"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03134">
        <property type="entry name" value="TB2_DP1_HVA22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0675">Receptor</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="174"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="27445" checksum="98A25C7D15929DBC" modified="2025-10-08" version="1">MKFFKRSKKKKKNSASEYFSDNDSEKSVSLKKRLSNIFKTKKPEKSSSFAQNPPSKQPKTTITSFQTKNTPSESTTERNHSHFHPNPAKIDFNQINSDENPFLRKPSSPNHDIANRKNLANLDSDKTKQNLANLNKTKFGQNIETLNFLNSLSKHYKWSVLVARKAKTGDTRSIVIICSFLSCILIFMGCLQPFIHALSACAYPAYMSFKALKTETQEDDRKWLVYWTVYGIIRITESF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM90</accession>
    <name>A0ABV2AM90_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002223</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000738">
        <property type="protein sequence ID" value="MES1920564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047458114" description="Secreted protein" evidence="1">
        <location>
            <begin position="25"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="92" mass="10525" checksum="CF6C9AA6DE8E4386" modified="2025-10-08" version="1">MLAIKILCFYFSIIALFQQTLVFGECDSNVGPVGSPECVLLTPYYHKYQWATCLTNSYIQTVSKGNANCRDHHATYCFYQCMMELYEIADGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB1</accession>
    <name>A0ABV2AMB1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Eukaryotic translation initiation factor 6</fullName>
            <shortName evidence="3">eIF-6</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">EIF6</name>
        <name evidence="5" type="ORF">MHBO_002453</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer. Associates with the 60S ribosomal subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
            <location evidence="3">Nucleolus</location>
        </subcellularLocation>
        <text evidence="3">Shuttles between cytoplasm and nucleus/nucleolus.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the eIF-6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000890">
        <property type="protein sequence ID" value="MES1920820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00527">
        <property type="entry name" value="IF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.75.10.10">
        <property type="entry name" value="L-arginine/glycine Amidinotransferase, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00032">
        <property type="entry name" value="eIF_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002769">
        <property type="entry name" value="eIF6"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00323">
        <property type="entry name" value="eIF-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10784">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01912">
        <property type="entry name" value="eIF-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006413">
        <property type="entry name" value="IF-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00654">
        <property type="entry name" value="eIF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55909">
        <property type="entry name" value="Pentein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3 5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="212"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="25834" checksum="7AE37ED0C7E6EFC6" modified="2025-10-08" version="1">MATKLSFENTDDIGVYALLSNAYCLVGQGSCENFYSAFDAELSSHVPVIRCTIAGIRTVGSLAVGNKNGLLLPNSIADSELAHLRNSLPDSVVVRRIPERYNALGNVVVSNDHIALLHPGASKETEETISDTLGVEVFRQSVAGSELVGSYCDLSNLGALMHPATTSEEQEELRARLQVPVVAGTINRGTTPISSGLIVNDWDLRLTFSAPSAAEAPPRPKCAPSKAFSDLRKASRKRLSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU6</accession>
    <name>A0ABV2AMU6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Serine/threonine-protein kinase Sgk1</fullName>
            <ecNumber evidence="6">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SGK1</name>
        <name evidence="6" type="ORF">MHBO_002567</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000985">
        <property type="protein sequence ID" value="MES1920967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="13017" checksum="16A91629A2A62DDB" modified="2025-10-08" version="1">MNNIDQPLVFKNIVDEDCKKLLKKLLNPEQKRRLGYNQHDYEELKKQDFFKGIDWCDVENKRVASIYKPCFCLNKIVTFKLFVIKGEQDLFEPAEMLLFGFGEYYLYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX0</accession>
    <name>A0ABV2AMX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002619</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001021">
        <property type="protein sequence ID" value="MES1921015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8149" checksum="08BF61DD7A168635" modified="2025-10-08" version="1" fragment="single">MAYSCPPSFDSLEYINACPVDERQWKERAKMKNCSKYPQTCFKPLQYHCLLNPYGNESVEVCAPKTRLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMZ0</accession>
    <name>A0ABV2AMZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sec1 domain containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SCFD1</name>
        <name evidence="2" type="ORF">MHBO_002632</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the STXBP/unc-18/SEC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001040">
        <property type="protein sequence ID" value="MES1921031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2060">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043154">
        <property type="entry name" value="Sec-1-like_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001619">
        <property type="entry name" value="Sec1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027482">
        <property type="entry name" value="Sec1-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036045">
        <property type="entry name" value="Sec1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11679">
        <property type="entry name" value="VESICLE PROTEIN SORTING-ASSOCIATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00995">
        <property type="entry name" value="Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56815">
        <property type="entry name" value="Sec1/munc18-like (SM) proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="307" mass="35605" checksum="0E26882B0BD7C5CB" modified="2025-10-08" version="1">MSEKSSLLDVQKKSIKRMLNLNKNGKSDKIWKVLIIDITGREIISPLFNLNEIRSFGVTLLLLSNSKKEAVSDAISIYFVEPNKENIDNILNDLMEDLYREYYLNFVSSISKEMLSYLAKKSLELGVSDKIKSVYDQFSHFQCLEKRLFSLSIKNSFSKMIKNDQNLAKRIVNGLFDIFVTIKEVPIIKAAKGSMAENIGRKLAEKIRSRSERNEDLFPKKKFGFSFKRTLLILVDRQIDISTMLHHTSTYQALVHDLLNYQNHQVSLEREDFLKNQKTNSTTFELNENDHFWIENKGLPFMDVASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN23</accession>
    <name>A0ABV2AN23_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002660</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001059">
        <property type="protein sequence ID" value="MES1921062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46620">
        <property type="entry name" value="J DOMAIN-CONTAINING PROTEIN SPF31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46620:SF1">
        <property type="entry name" value="J DOMAIN-CONTAINING PROTEIN SPF31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="35"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="161"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="200"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="200"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="219"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="28594" checksum="2058B6C44BF5D2FD" modified="2025-10-08" version="1">MAEKDEEVLDDFFSEIGDIEQNNEIDRIIKAMTLDPINILDIPYHSTSSEIRRRYKKLSLKVHPDKVPESKKELAKEAFFKLGKAYKDLLDDEKRKDLNEIVNFAKKFLEKKYSSAKKKSITDFTGEKDKDLKREVAKILIDRAWKNRMIKKMSEKYDERAAKEREEWKNDQKEKSDHQRKWVEDRSKRVNSWKKFKANVKKTSRRKVVKGVGHRVKSKKQENGKDENKIKFKKFNRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN82</accession>
    <name>A0ABV2AN82_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002418</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000861">
        <property type="protein sequence ID" value="MES1920782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044632">
        <property type="entry name" value="DNAJC25-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44176">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44176:SF1">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="23094" checksum="F012866EC65426CC" modified="2025-10-08" version="1">MRERYDEVVRIKARMFVPKENPIFVAFLILLVLIGFRYYYEGYQHRNKRRRLLENEAVRRRIKKKMLSEGKKLRIRNNTLHDDISDLMLIEAVKELNIKVPGGFKGRPSIYEVVVSVPSIPGSWAHRVYYGIRWMVKYELLHQQFDDSDKEYLTFKALGLTEKDWKQLSEEEKNRYLQRDLWKRKNIAKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN94</accession>
    <name>A0ABV2AN94_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002716</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001104">
        <property type="protein sequence ID" value="MES1921136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="27244" checksum="63F3DC18D8B41B5C" modified="2025-10-08" version="1">MQKSESKIKDLKLKNEKLNLEMASILNKEKESNKKIDVLLNKCDVMTRKYRNFAIKCVNLTADKNKKEIEISNLTNKISLIKKMTNKDEIKNYSSSDICNMKIELEHYKVLILLHLFKRKKYSVLYSIFGKKIQSLETVYMYFAMFVLTKQYRLVYENALFVKKHLILRRAGRYIYKRYSLFLYEINFLSIRLVSFLFTMASFEAFGFRIFFCFLWFREAYLIKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANF8</accession>
    <name>A0ABV2ANF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002767</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001149">
        <property type="protein sequence ID" value="MES1921201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="200" mass="23386" checksum="6AD535B1A1984E74" modified="2025-10-08" version="1" fragment="single">ENLFSEHNLEQDNYLKSVADVNGFVHEEDVRSHYALSSYNLSGDTLCRLATTMGSLQVEGYYMRAKNYWWKYIRYPLNYQEYRILCQQTNLRNRPIEYNENSLIKKSEESQVGFRSMRFANFVQNLFPKKPKLPLTVKVGLKSTTVFGNDGNEKSNNAKKYAIKIVSSEELKAEQEKVRSKISNRILAMREKHRALGRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG5</accession>
    <name>A0ABV2ANG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002753</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001134">
        <property type="protein sequence ID" value="MES1921185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12269" checksum="BFB1BD3128619305" modified="2025-10-08" version="1" fragment="single">MVEVFNNSNDNFVVEKSSTSSNFIDEKEYLKLEKRIKDLKSTLLDKDLENVVDIISDPFGGVSLKSKKDFYIGETVFEESPLMAYTSNGFCIFCRSYHPVHREDGID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM6</accession>
    <name>A0ABV2ANM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002598</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001003">
        <property type="protein sequence ID" value="MES1920993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19260" checksum="0D803CD692CF1E5A" modified="2025-10-08" version="1">MVVTNNKKRKRVSFAVKESVELKKETFLEKTANFQKLQSKNLFVSNYGLLASKDKTSLDLYKNLIISNEYEMVKKQTETDEKLKSKSKKMEVKINSAKNGKKKDLKKGETDLSVKLFNNKKSDILSSLNSDYKKIIPAEFRKSAQQIALENQRVVKPQWFICLRFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANQ1</accession>
    <name>A0ABV2ANQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002826</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001208">
        <property type="protein sequence ID" value="MES1921273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1120.30">
        <property type="entry name" value="POLO box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036947">
        <property type="entry name" value="POLO_box_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82615">
        <property type="entry name" value="Polo-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14658" checksum="191D776FC86CDAFA" modified="2025-10-08" version="1">MNWFKTSKAKVFVFSNSVFQILFNDKTEIIATSPCCLAEKKQKFSLCEKHCSAVSELERRFELYVEKVVVTFTKKNGDKETCLLSEATSSENNVLKQRALYLKEVVKKVTKTVPRLVLLERMRALDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX1</accession>
    <name>A0ABV2ANX1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleolar complex-associated protein 3 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002907</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001289">
        <property type="protein sequence ID" value="MES1921373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011501">
        <property type="entry name" value="Noc3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016903">
        <property type="entry name" value="Nucleolar_cplx-assoc_3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14428">
        <property type="entry name" value="NUCLEOLAR COMPLEX PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14428:SF5">
        <property type="entry name" value="NUCLEOLAR COMPLEX PROTEIN 3 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07540">
        <property type="entry name" value="NOC3p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleolar complex-associated protein 3 N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25737" checksum="E884D998B6556318" modified="2025-10-08" version="1" fragment="single">MSILCLTQVFRDISPSYPVVRDTDDSKSSKRLSKSIMERRLLEDSILRHYKNFVFFLISNVQKPKSKSQKNKSSGNISKTSIYSLCSLIDSLYSFNFSEKIAKSLISRMSAEKNRPYLAKLISDTLSNLAKRGEKVSLIVTKTILSKLNKKSFKNSKQSFNQIKVICAFKSRKTVFDEESHFSKNYKNDCRLVQQNVLKFLIALIQHNFFNKEESLVVITHLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP93</accession>
    <name>A0ABV2AP93_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">IrrE N-terminal-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002834</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001215">
        <property type="protein sequence ID" value="MES1921284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="105" mass="12387" checksum="3534FFE17E3EF387" modified="2025-10-08" version="1">MNNKGRLKIGFNKYEIIEVKDLIRDKNNRGEINRNNYTILLDSNCEPIVKTETLFHEITHCILDQMDNEELGLDEHFVELLSKQILYFILENKGFVERVMGDDNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APA5</accession>
    <name>A0ABV2APA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002889</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001269">
        <property type="protein sequence ID" value="MES1921354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13876" checksum="DB5387486D93F802" modified="2025-10-08" version="1">MSFGYLYVRCENGKILNEWNVELDKNKKDLFCDNDNVLENFKSCKRPRFKNVVVLNGNNVEYERSNAKFAARCYGDKTSKNFMVQCVGDEWVFVFDEGVFGEEEMTKHCEMATSQNVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL1</accession>
    <name>A0ABV2APL1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001317">
        <property type="protein sequence ID" value="MES1921404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013954">
        <property type="entry name" value="PNK3P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12083">
        <property type="entry name" value="BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12083:SF9">
        <property type="entry name" value="BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08645">
        <property type="entry name" value="PNK3P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17447" checksum="6F7F9CD8E11243E6" modified="2025-10-08" version="1">MPIDRTNSFYVGDAAGRIKNWRKGKNADFSVSDRKFAANLNVKFFTPEEFFLDEPATDKWSWGSPDPREFLDKCPKSKFSNEKFDIENCAKKCDFVILCGPQGSGKSTFCKTYFKDFSLISTEEFRTHSRCVTEAKSFEFKFRIGQIENSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP6</accession>
    <name>A0ABV2APP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Calcium-binding protein 39-like</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CAB39L</name>
        <name evidence="3" type="ORF">MHBO_002853</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Mo25 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001231">
        <property type="protein sequence ID" value="MES1921307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013878">
        <property type="entry name" value="Mo25"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10182">
        <property type="entry name" value="CALCIUM-BINDING PROTEIN 39-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10182:SF3">
        <property type="entry name" value="PROTEIN MO25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08569">
        <property type="entry name" value="Mo25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="14"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="330" mass="39027" checksum="95CE8B4BC5C07AAE" modified="2025-10-08" version="1">MPFLLVKKRPKELCKKLVKLIDSLEERIAEDEESQIALQKTNEKVLEILATMKTMIYGDEENDPKMADVKRFRDELTDPNTKLFIFLLKKFHLLGITQQNELTKIANFYLHRARQNNFVEYIMENQVVVDILTEGISNDVSSTYYSSMTGECIKHKDLAELFLSPERLHRFFDYAGNVKTDLAMEGFKNLRLLLTVHKKIISSFLKQNFDLIFKHNFSNLLKSENYFTVTKTLILLYDILISYENKQVLAKYMNELPLLIQIMELLRSKQLNLQNSAYNIFKLFLGNDKKSEEIERVLYNNKTVLEDFLKRFENDGLIFLFLIFFDNFFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX5</accession>
    <name>A0ABV2APX5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003033</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001427">
        <property type="protein sequence ID" value="MES1921506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12212" checksum="9C4E26987B3AA39C" modified="2025-10-08" version="1">MEKAKLLSLKTMATVMKNDDGVFSLRTVKNGGLVLFGVDNLAEKYANVKFSIDVGASSNLLPTLDSWSKETTCSFTMDKEDLKTTALVGSFIRANNEKCSFSAKVNYSAIDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ3</accession>
    <name>A0ABV2APZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA damage-binding protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DDB1</name>
        <name evidence="2" type="ORF">MHBO_003004</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001382">
        <property type="protein sequence ID" value="MES1921473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050358">
        <property type="entry name" value="RSE1/DDB1/CFT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004871">
        <property type="entry name" value="RSE1/DDB1/CPSF1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10644">
        <property type="entry name" value="DNA REPAIR/RNA PROCESSING CPSF FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03178">
        <property type="entry name" value="CPSF_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23875" checksum="0957CDC123B7663E" modified="2025-10-08" version="1">MRSITLLGHDTETLHKLASDCRMSFVTDTEFLDKDNFVTADRHGNLRYIKRDVDSSKRLLPDLATKGRFHLGSKITIMDRTSADFNPIEDHNRKRIIFFGTAEGEFGVVFKVDSDDLSKIKKLQNVLSNNYSNFHSLLKHMRYREFFDRTNEKVQMENFLDGNLLNIFEDLDKNSQKDVALKSDCPLKDIFRTLKQLDDEFSVNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ31</accession>
    <name>A0ABV2AQ31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">E3 ubiquitin-protein ligase</fullName>
            <ecNumber evidence="1">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003324</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the E3 ubiquitin-protein ligase UBR1-like family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001770">
        <property type="protein sequence ID" value="MES1921792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044046">
        <property type="entry name" value="E3_ligase_UBR-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039164">
        <property type="entry name" value="UBR1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21497:SF24">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE UBR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21497">
        <property type="entry name" value="UBIQUITIN LIGASE E3 ALPHA-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18995">
        <property type="entry name" value="PRT6_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="E3 ubiquitin-protein ligase UBR-like C-terminal" evidence="2">
        <location>
            <begin position="29"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU366018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="300" mass="35015" checksum="BA8BDB0C80B9E2C3" modified="2025-10-08" version="1">MSNFIKIISNNMDPDENHSALHKWKDQLIETNFTTEPFEILLNCILSLKSKNDGTVEAMNLCWRLLTVQLLIKTIAIQNEKSLFPEKTDSNNYLKLQNLSKWRDFLNSEAKIYETETTKNRTEKEKMFKMSEDRILAQYKAILNKTIKLSIFNALPFIENIAERFIRRTALLFVVLGFINEKDFFLEYKKLENIFKLPSMEKMLQTDFSDILAIFLETKNSQNTFNLNNKLKFDQIFFAVKPSLIRLPKDYNHLFQLAFDAICENCNTNPQKPALCLLCGKVVCVASKCCRTEEKVLFIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI0</accession>
    <name>A0ABV2AQI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rho-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003448</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001941">
        <property type="protein sequence ID" value="MES1921920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16930" checksum="B17FCA4E473B6D6F" modified="2025-10-08" version="1" fragment="single">KKIPEKGKAVLKHMAVFLTNLAQNEKITKMDLSNLAIVFTPTLTRIETTKDISKMMLINDHLQTFVVYLLLYYENQKSELAVPPPIPKKGMRRLISVLKSEDESAQEDMTIEDFIVSGKMDESLRKMEVSADENDELCHLEEDNTELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM6</accession>
    <name>A0ABV2AQM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003504</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002018">
        <property type="protein sequence ID" value="MES1921978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="20369" checksum="BDAF04E1FFBCF00A" modified="2025-10-08" version="1" fragment="single">MISFSKRLFCSTQRFRVVKKRKGLPKLVDNLRPKKPLNPRLKKDITNVTPELDHQFKEDMEMFKSKIEDYKKSNNYAEFLDEFIKVLEKAKFQKENKLKFKKTSRYGYFVSENLSKSTMKKLSEEYKQFSDVKKEELDHKTSQYNEKKMAEFERFRRSGEFSELEMEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX1</accession>
    <name>A0ABV2AQX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pre-mRNA-splicing factor ATP-dependent RNA helicase dhx16</fullName>
            <ecNumber evidence="3">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DHX16</name>
        <name evidence="3" type="ORF">MHBO_003584</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010002164">
        <property type="protein sequence ID" value="MES1922065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011709">
        <property type="entry name" value="DEAD-box_helicase_OB_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07717">
        <property type="entry name" value="OB_NTP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box helicase OB fold" evidence="2">
        <location>
            <begin position="33"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15495" checksum="A763275A30C91D47" modified="2025-10-08" version="1">MRRARDVKEQLEELMKRVEIELKFGQNDFISIAKTIVSGFFFNTALLGKTGNYKTFKFRQTVTIHPSSCLREEMPKWVVFNEFVLTTKKFIRTVIKIDPKWLLEVAPHIYRKEDLEIEKKMPKLKKSAVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM5</accession>
    <name>A0ABV2ARM5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">37S ribosomal protein S25, mitochondrial</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_003621</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATPase d subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002223">
        <property type="protein sequence ID" value="MES1922106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008689">
        <property type="entry name" value="ATP_synth_F0_dsu_mt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036228">
        <property type="entry name" value="ATP_synth_F0_dsu_sf_mt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05873">
        <property type="entry name" value="Mt_ATP-synt_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161065">
        <property type="entry name" value="ATP synthase D chain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0138">CF(0)</keyword>
    <keyword evidence="5" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="307"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="311"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1922106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="330" mass="38514" checksum="BC34DBC45873FA79" modified="2025-10-08" version="1">MFANRSSKILNKTKRLTVTTFKKAKLTTRTVNNVTLPAIDWDDWIKQYPSFARKKALEFKKHCENIETDCDFDPVQIDKIDWDYWRNTIKTPGIVEAIKAEFDATDNSDYGAYYFDHLTDKARNEILSDHSRHSEEAKSIGPDLIRKGVRTTLQNDIKQKIRSGAEMSEKSSLLLEELYKDLEQIDININRSYRRSKDEELAELPDFARETEENLAGGGFGNGYNTYPDDYSRENAMLLEQENRYDKECAENSLRAFDRSIDDYLQLLLKMGFQVEKEEYIDQKFAEWQKEINRLREYCKTTRSIESVDPETGKEMTQEKERLVKVPGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN8</accession>
    <name>A0ABV2ARN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Histone H4-like TAF Taf6, SAGA complex subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">taf6</name>
        <name evidence="7" type="ORF">MHBO_003635</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TAF6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002248">
        <property type="protein sequence ID" value="MES1922121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.770">
        <property type="entry name" value="TAF6, C-terminal HEAT repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037796">
        <property type="entry name" value="TAF6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011442">
        <property type="entry name" value="TAF6_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046344">
        <property type="entry name" value="TAF6_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10221">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10221:SF9">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07571">
        <property type="entry name" value="TAF6_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TAF6 C-terminal HEAT repeat" evidence="6">
        <location>
            <begin position="164"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="28501" checksum="99BADD5CCE63EE2A" modified="2025-10-08" version="1" fragment="single">MSNLLFNEYHFITKKLLDAKTKIDQNNKELLSERIHNQFSELLKTSNDLAQIENRENIEIFDIKMALKSLNRNNLFLQENSFLTENISKDSLKNGEILMTSKEFEGHLSVEKPRSRCLNIHWLSIDGIEPQTVYNASNPKKLLNSKFRLNDEQKEIVLIKKKNSILTKEMERYFKEIIKNLNSDDKKIRKIAFRALSSDKGLEPLTPFFIQHVSKKISKNNDDIDSLKESLRLLSTIIFSDRAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV5</accession>
    <name>A0ABV2ARV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphoglycerate mutase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003913</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002725">
        <property type="protein sequence ID" value="MES1922400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050275">
        <property type="entry name" value="PGM_Phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48100">
        <property type="entry name" value="BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48100:SF1">
        <property type="entry name" value="HISTIDINE PHOSPHATASE FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="217" mass="25075" checksum="5D273C13FDFAB4F1" modified="2025-10-08" version="1" fragment="single">GICQSLYLQHELLKRDFWGENKIDLIVTSPYKRAILTALAISRPKDFAVSCNFPVGQLTKSPGLILATQRYALSKVGVRFPVAEVLKWPISDIVDDKKFDLLGLTKHQKIPLIVNPLVSEIRRNNGDIGSKPAKLRETFSKIRFNRLKENWWRDKKQKNFKESVTEVNERTKNFVDWILTRKEKNILIVTHSLFIKALTGSRKLRNCEILCANINKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY6</accession>
    <name>A0ABV2ARY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003938</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002776">
        <property type="protein sequence ID" value="MES1922427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="168" mass="20446" checksum="F63B9FBAA52E830E" modified="2025-10-08" version="1">MSYENPSIDLVCPEKKDEYQNFSQSIKDVRSIFEKYKELKYIGVEPILKIEAKKKKPKRNTIFTFWQKRIFYLFDDAFLWKTPTSNNSPCAIVPHFCIVKIEKFGYTQLHVKPLKTRIFEIKFKNQDERDKWYEQLVKRVCESKNARNEIFNGNYLRDNYWKVKLFYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ7</accession>
    <name>A0ABV2ARZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003962</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002837">
        <property type="protein sequence ID" value="MES1922446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13202" checksum="076738456E6AB7D0" modified="2025-10-08" version="1">MDDLSTKIEKNGNFKPRRTREFYRRTQGPQYLCDLPDRIKFSHLFFGTNETDHVNAHSHDSNFYSELEFLTSPLRKKGPVDDWSVKEIALFEIGIFLNRKNFSTIQKMVWN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA7</accession>
    <name>A0ABV2ASA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004066</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003073">
        <property type="protein sequence ID" value="MES1922551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="18723" checksum="9881ED421BAFF115" modified="2025-10-08" version="1">MGADLLPLPGQYRLLQKTNPRLEAHLQQSAFALRQVASVERAQVSVPCQRLRHQRQMARVDGDAVDVEDGADLLDDGEAACFDAVGAQHCDDVVAADGVDVDEVLRFIESDEVDAFGLNARLELVLLEPRFEDVAVFDSGGGAQFECRRQFADRLLLNFLTILVFFTNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE1</accession>
    <name>A0ABV2ASE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004092</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003125">
        <property type="protein sequence ID" value="MES1922577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10414" checksum="03B26107000DCA80" modified="2025-10-08" version="1" fragment="single">VLVEREDEFEEPYVENPEEAVYYNHLTTAKDISVTDLLNVIRRKEANKNEGFKNEYKVDLFSISITLLRELKIHNHRMYMHVFDKAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM9</accession>
    <name>A0ABV2ASM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004166</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003323">
        <property type="protein sequence ID" value="MES1922647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="18157" checksum="1832D63E38E77C94" modified="2025-10-08" version="1">MIKPKKILSKRIYETETTSLVGGETLQIPRVANFEWCPASSFLAFRCDPDNERRVKLGTLAVPSLQQRIASIYHGNPRLRISWDCDRLVSDVHTYTHKNRPKHVSFDFFDYKQSFGAKNAHFALTEKILHILKAGRTEEFPMLFYFQKIIDQKFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS6</accession>
    <name>A0ABV2ASS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004253</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003524">
        <property type="protein sequence ID" value="MES1922730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd11660">
        <property type="entry name" value="SANT_TRF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.470.10">
        <property type="entry name" value="Chromosomal protein MC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008674">
        <property type="entry name" value="MC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036620">
        <property type="entry name" value="MC1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052450">
        <property type="entry name" value="TRBD-Containing_Protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46734:SF1">
        <property type="entry name" value="TELOMERIC REPEAT-BINDING FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46734">
        <property type="entry name" value="TELOMERIC REPEAT-BINDING FACTOR 1 TERF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05854">
        <property type="entry name" value="MC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102875">
        <property type="entry name" value="Chromosomal protein MC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="3">
        <location>
            <begin position="41"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23470" checksum="D64624AF1EDFF4F0" modified="2025-10-08" version="1" fragment="single">FGHGKWARILQFFEFDDRTAVDLKDKWRNLQKPSSTVKVPKGRRTRLPYSESECQMLQSGVRTFGHNWVAILRAFPFHSDRTPVDLKDKWRNLQIKSGKISPPPKKQRRFLLLDSDNTIFMNVYPRDAALKAAARGCDYIKLLQIGTPRIHVFAGERSVVQRYIGRQKGSVWKGRVLKLGMERATVEQLKVAKARFAQQFGLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST3</accession>
    <name>A0ABV2AST3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004252</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003523">
        <property type="protein sequence ID" value="MES1922729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="106"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="67"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="23176" checksum="C1393C107DE58160" modified="2025-10-08" version="1" fragment="single">MEKPKSLPNLSKSSLIEDDDPFAELIKAFPPKSSRFSVLAISPPRKNSESRPKLKHQQTEMQKIADERKLHKMIKKAEKNLNNLKVETEENQNSFYRSAENLRIATKDGEQPNFNRNGKLQNNENISQKNSDVTKNGDLGSFGKHFDKNELVFMSDLDKNRLFWIEEQLDKLEKERNAIFQRVDDRKQKMTDEKVQRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW9</accession>
    <name>A0ABV2ASW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_004011</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Tim17/Tim22/Tim23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002956">
        <property type="protein sequence ID" value="MES1922493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10485:SF0">
        <property type="entry name" value="AT05822P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10485">
        <property type="entry name" value="MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02466">
        <property type="entry name" value="Tim17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0811">Translocation</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1922493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="13872" checksum="0A0873550FC9F92D" modified="2025-10-08" version="1">MESIPCPDRLIDDCGGAFIMGAVGSGIWNYFKGYRNTPKNKRKWFSKMRGSFQAIRQNAPRTGGAFAIWGFTFSAFDCFISKQRKKEDPWNAIMSGALTGGVLSIKRLSKLNIKRADGQWSPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ4</accession>
    <name>A0ABV2ASZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Dynein heavy chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004071</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003086">
        <property type="protein sequence ID" value="MES1922556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103:SF2">
        <property type="entry name" value="MIDASIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103">
        <property type="entry name" value="MIDASIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="75" mass="8541" checksum="A144756D42D6DF4F" modified="2025-10-08" version="1">MKIEKMLIEKTKLNKFGLKSITLTPKMMRLFNLVLAAIQNNEPVLLVGGPGNSKTTICQVYKICLQCSFYIFLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT26</accession>
    <name>A0ABV2AT26_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004257</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003542">
        <property type="protein sequence ID" value="MES1922734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="20975" checksum="8FB99B0DD330EE74" modified="2025-10-08" version="1">MPCGELGKGLGSLSLDPTVNQVSGSAARGGEGATKALASMELTRHTQLRLWSEKPADTSSVVTFWWAKVSPDGGTYTKIDDSESQFTVKGGTKALLVRMRPFTIELENGDRLALRASADKVDGAFIESTSQKLPMVLVSDTVKELTERDQNVDYLMKHANEVEFVDAGVPISDPENYKLQIDIKTGQTKIVNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT29</accession>
    <name>A0ABV2AT29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nucleotide pyrophosphohydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004322</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003748">
        <property type="protein sequence ID" value="MES1922797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd11542">
        <property type="entry name" value="NTP-PPase_u5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1080">
        <property type="entry name" value="MazG-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101386">
        <property type="entry name" value="all-alpha NTP pyrophosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="106" mass="12398" checksum="428374185B3A03DE" modified="2025-10-08" version="1">MNLNELTKEIHDNALAHGWWDEPRSFGEIIALCHSELSESLEADRNGEELMWYHEDGKPDGKAVEMADCIIRILDWAGNECVNMDYVIKQKHEYNKTRPYKNGKKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT30</accession>
    <name>A0ABV2AT30_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Rad21/Rec8-like protein N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004051</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003048">
        <property type="protein sequence ID" value="MES1922537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039781">
        <property type="entry name" value="Rad21/Rec8-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006910">
        <property type="entry name" value="Rad21_Rec8_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12585:SF69">
        <property type="entry name" value="FI11703P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12585">
        <property type="entry name" value="SCC1 / RAD21 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04825">
        <property type="entry name" value="Rad21_Rec8_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rad21/Rec8-like protein N-terminal" evidence="4">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17112" checksum="AC2CC27A599F5547" modified="2025-10-08" version="1" fragment="single">MFYAKTMLGAKDTNLSKAWLAAHLNGTHKLRKNEIQKTNVSETATTLMTEDLSMALRILSQLLLGVTRIYARQVDYLYYDSANALLVLKNKPSQTRPSKRKSTKLANARNLAKKLSMAGKIRPSRSPDDEVIMRGSQQKMVRNEEISISAQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD6</accession>
    <name>A0ABV2ATD6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004176</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003344">
        <property type="protein sequence ID" value="MES1922658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="138"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="27489" checksum="C80D6E495BF3B4A9" modified="2025-10-08" version="1" fragment="single">MELENLKKLLVQQKFSLKKAERIYHSRFEKDSGKSQRYFDSFQTKNFNFNINTGESSKKTLLKRKDVDRRDGKIKVELPKYRKNGIEKRKIDDKAKYRMPDNRRRRIRINLPDEESLKKPRKMPKLSPAMEKRNQMFMNHLKNHIKEAKKELKIERKSEKMRNREELTKRIDEAITKDREEFKDEYRRKKQEKARNFMLCKKFDLEETEWKIAKIMKTKIVFIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ8</accession>
    <name>A0ABV2ATJ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Glutamate--tRNA ligase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_004494</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004174">
        <property type="protein sequence ID" value="MES1922962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1160.10">
        <property type="entry name" value="Glutamyl-trna Synthetase, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050132">
        <property type="entry name" value="Gln/Glu-tRNA_Ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020059">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_codon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020061">
        <property type="entry name" value="Glu_tRNA_lig_a-bdl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_bL25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097:SF5">
        <property type="entry name" value="GLUTAMATE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097">
        <property type="entry name" value="GLUTAMINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03950">
        <property type="entry name" value="tRNA-synt_1c_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="Ribosomal protein L25-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic" evidence="8">
        <location>
            <begin position="5"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="Glutamyl/glutaminyl-tRNA synthetase class Ib anti-codon binding" evidence="9">
        <location>
            <begin position="88"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="194" mass="22624" checksum="B820F46B80E2AE64" modified="2025-10-08" version="1">MPKVKTFSRVNFVNTVLSKRLLNTFVQERTVTGWDDPRFPTVRGILRRGLTVSALRDLIMELGFSLNENLMEWDRLWSINKRVLDPVAPRFTAIESDRKFLIEIFADAHKIEQNGNFLDGICVRSVPLHPKKAGGEKKVIRIGRRVFVERIDAENLKKGEEITLIEWGNVQIDEIDLDKNRNFVVLKKHFFLFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL1</accession>
    <name>A0ABV2ATL1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rho-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004539</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004314">
        <property type="protein sequence ID" value="MES1923005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="14882" checksum="A05A1F301912BA80" modified="2025-10-08" version="1" fragment="single">SFDKSSFEKIDQKITLVLQECLDTDKAFPSDTEAKNVLYLLARFLKYLPEPLFPLKYLYTQNKPGTVTELLNEAILKIDEVRRVNLMHILVTLKNIVAGKQSGFRANVVARFVYPIFRVKPTAQKFNSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU5</accession>
    <name>A0ABV2ATU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004582</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004472">
        <property type="protein sequence ID" value="MES1923049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8679" checksum="974F5575DDDB2CDB" modified="2025-10-08" version="1">MFDCFKNNGINFMTSTNSTTVHQRWVKGRVPSPNESENVKKFLAIHNYPVYQLEKVPDDALLLQGCIHTSTSSMNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU08</accession>
    <name>A0ABV2AU08_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004708</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004944">
        <property type="protein sequence ID" value="MES1923163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16032" checksum="23CB2B212E81CACA" modified="2025-10-08" version="1">MCAEHTPIVSLIYPMKAVILENMSESVHDSNLVRDVKQAIRNDLIKRYSEEDTADFLLLRAALDPRFKGLPRLEPDKRDEIYSNIESRVILLGKEPVKVSTYLSFHLTRFSIHICVKVKKLKFSFCFMIFEKRGQSVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU14</accession>
    <name>A0ABV2AU14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004446</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004030">
        <property type="protein sequence ID" value="MES1922916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="27856" checksum="E2ABB00D25E2CD09" modified="2025-10-08" version="1" fragment="single">MQFVKSLKKYFGVIPKFLIVLRINDNDYITKEISPPDVRFSKNNDCSPRAISFHPDKQRLFLHATTNPINKIPELRAAEMINLSSYHDRLVKNFDERNDNISLARKLGIKIDADLKNIPGPPLYWPDAFPFTDLNVVEEFLSSVQKELDYHPDSNKTKPLKDVQKLLSEMSILINLGRKSPRVTNTVNELRANVNGKEVEDGLMMVEYMNDGYENEVKAAVKFVPIHLIDVSNGFGDLQYSIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU82</accession>
    <name>A0ABV2AU82_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005154">
        <property type="protein sequence ID" value="MES1923221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16620" checksum="3B20684C31FB0BC9" modified="2025-10-08" version="1" fragment="single">LLFNPTNSVTREGKMEVYITNVSVTACANSSPNVINEIKNAIGFANKFAEENLAFRLNVLQYTTLEKEDQSTPDNKDCNSTDRGELNAFLEGVKTKNMANGMLYMFITTFDNEDHAKRKGKVDETESPILLAVHKDEIIGKNILKSVLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA0</accession>
    <name>A0ABV2AUA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005321">
        <property type="protein sequence ID" value="MES1923255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17181" checksum="BB15597EB3FADE9B" modified="2025-10-08" version="1">MDLKKDQKMDLEKDQKMDSKNESSDYESSSESSKRKVSRCANCFLEKSLSQITKVNGENICADCFDDYVKNLDPEEKSRREEIVERLKRQGAKDFTTGSIKAHEIKCAMCGELSPLSSMTKYEMQNYCSNCLSKITQKKNRGVYKFTPLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD4</accession>
    <name>A0ABV2AUD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005388">
        <property type="protein sequence ID" value="MES1923269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="18696" checksum="8869CA85D87A2956" modified="2025-10-08" version="1" fragment="single">DSDKRGYDMFVLSEEIKEKSKVPLSDEQIKIRILEQLRYSDIDTLNNHILDYHSDLEQLCRYPERFDTQQLTHDFMEAFEYAHRRAPELENANDSISADTVMQEIFDKFNKIFKEPFTSLLRDQEDSRLEMRDLLKLYAIKYVYKTNPKDDPLGLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP1</accession>
    <name>A0ABV2AUP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004957</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005962">
        <property type="protein sequence ID" value="MES1923391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18942" checksum="A045907211F8F758" modified="2025-10-08" version="1" fragment="single">KRKLREDLLDKIQLLKWFCKHQNEFSKITICLEDLQKNFFDALRSAFNYERRLHSFDVKYYNLFEDLYLSYYDDYENARIKCDLLVDEHGDLENKLELLLSIEEIEKSTEVQKKLILNGKNIQTLKQQINSLGILLKSMENDNEAERIRLKIPGFALF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ1</accession>
    <name>A0ABV2AUQ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SLC12A transporter C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004947</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005933">
        <property type="protein sequence ID" value="MES1923383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018491">
        <property type="entry name" value="SLC12_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03522">
        <property type="entry name" value="SLC12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLC12A transporter C-terminal" evidence="1">
        <location>
            <begin position="66"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="14846" checksum="4FD9ADF3428A1900" modified="2025-10-08" version="1">MEIVHKNSRAKSTFTMGSLLWKLRIPAKVVPVEVTMNSKAISEESLFLYSKCVGKKLNQIVLDFETVSILCLGDKISELSKEAFMTFVTLPVAKMGLPWREYLGILEVLSFRSKRLCFVRGNQENVLTSEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU2</accession>
    <name>A0ABV2AUU2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005006</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006188">
        <property type="protein sequence ID" value="MES1923434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="133"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="15532" checksum="88056F5270D46AFB" modified="2025-10-08" version="1">MDRSGVPLNPSVNQVNEEAAYQLMASSTYVVMDRSSVPLNPSVNQVIEEEEAADQPMASSTNRNKDLKPRKTSKKPRKALNIFSRLGKNVARKLNSTKADKGTENATDTVADENAYMDNGDQVNGEDAYEPMSFSSNSTNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW8</accession>
    <name>A0ABV2AUW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005024</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006257">
        <property type="protein sequence ID" value="MES1923451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12364" checksum="E1CD506651E0E309" modified="2025-10-08" version="1" fragment="single">NCLWGTSCMYPFSIILQRKDFLNTYCLELEMVKTCRTRYRYCGQGIHIYLPVPSSLLTPIFTLSLYSSILPSFFLCFPILLFPSSLPLSSSLLSLLPFPCTLSAQKYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ2</accession>
    <name>A0ABV2AUZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004806</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005356">
        <property type="protein sequence ID" value="MES1923261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="13688" checksum="A80E78D89A5FC86C" modified="2025-10-08" version="1">MLKEMAKDDNFDVSSDDENKLFEQNNNRDKNYFGNQYDNRNQFEHRNRFDNRKEFENRNEFENRNEYKKRNEFAEKGFDEDSESDEEIIRLKLQIMKKREELKNRERNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV29</accession>
    <name>A0ABV2AV29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF5824 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005093</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006579">
        <property type="protein sequence ID" value="MES1923511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043862">
        <property type="entry name" value="DUF5824"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19141">
        <property type="entry name" value="DUF5824"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5824" evidence="1">
        <location>
            <begin position="7"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="9644" checksum="03B5BD64C4C608A0" modified="2025-10-08" version="1" fragment="single">LQQPNSKKDISKLTGISMSILDAVYYRGMGAYKTNRGAVRPSVKSPQQWAMARIYSFSVGGKTRQTADADLWAKHLKNKKLNSKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV47</accession>
    <name>A0ABV2AV47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005127</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006751">
        <property type="protein sequence ID" value="MES1923539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8356" checksum="026AA4BA93934341" modified="2025-10-08" version="1" fragment="single">RRLEARGVFEKQLERVHINDSGFEVDRLHGKSETESVCFTEGRDVDAQFMDNIEWVSADFDEFVFCLELKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV96</accession>
    <name>A0ABV2AV96_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005181</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007000">
        <property type="protein sequence ID" value="MES1923585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7422" checksum="0C23979ED4459358" modified="2025-10-08" version="1" fragment="single">GMTSVFISKFFPCFSLDRIKIIEWIPDNYIPVSQVRPDAVEASQLSHARMYVFTGCHEENQTPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AED6</accession>
    <name>A0ABV2AED6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid permease/ SLC12A domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000073</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000009">
        <property type="protein sequence ID" value="MES1918047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004841">
        <property type="entry name" value="AA-permease/SLC12A_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004842">
        <property type="entry name" value="SLC12A_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827:SF72">
        <property type="entry name" value="GH08340P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00324">
        <property type="entry name" value="AA_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006060">
        <property type="entry name" value="AA_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="62"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="226"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="260"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="316"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="365"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="390"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid permease/ SLC12A" evidence="6">
        <location>
            <begin position="35"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="452" mass="48566" checksum="9E53A9B9290C7254" modified="2025-10-08" version="1">MTTSKEKTEEPGCCCLFDCIVGYCKKTKFGTWDGVYLSCLLSMFGVIMFLRLGYIIGEAGVWQTWIIEFISAIVVFVTTLSMSALCTNGEVRHGGAYYLISRSLGPEIGGSIGILFTIGNSIAVSMHILGFAEPMVNQIGKIVTNSEKNDLRVYGTILLFVLLIFAFIGVGWMIKIQFLIAFVLIAAIICFFVGCFITIDLNYLIVSVGNGAFMENFNSAYTEGTSFVTIFGVFFPAMTGIMAGANLSGDLINPSNSIPTGTLTSVITAWAVYMAMSTIIADSTLRGDPSICSSEYPSTGLCYNLIMEKIAVPGEIIYAGVYAATLSSALAALIGAPRILTTVANDKLLSILNIFAIKRNNGEPLFAYIPAALISFGCIMIASINTIATVVTITYLITYALINFACFQSLKTNVKSVIDLSVNLLETSKSELGLSYTRNSNDNSGETIASST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEI7</accession>
    <name>A0ABV2AEI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ADP catabolic process</fullName>
            <ecNumber evidence="7">3.6.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">NUDT9</name>
        <name evidence="7" type="ORF">MHBO_000113</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.13" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047631">
        <property type="term" value="F:ADP-ribose diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039309">
        <property type="entry name" value="BT1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03092">
        <property type="entry name" value="BT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="60"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="89"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="15827" checksum="C535523DD7DEBA52" modified="2025-10-08" version="1">MIFRKNKLLGISDQLMFITSNEVFWNLARAFSNIGIVMLISKKRGDDMQVSFVSTFESMGYAYAGALGIILTDFLKVDGDARPCRFQNYWIMSLVGSCILPATTLLFMFWVIPRFKIPGDDGKEESEISRNSKSSANFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEI8</accession>
    <name>A0ABV2AEI8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18942" checksum="52B1410B338FF3BC" modified="2025-10-08" version="1">MVFVNYKNPIRIKIHELSKMEHEPFAVDKKGMADITEKFANSKNMTEKKKILEHLKYAHNFNATQIENFISNIYFYKGPFAEKVLFAFQKNVFKLFSEYEQSLKEAEQLFAEHREAPAGNFFFSPGNIVEKGFNETGKLARNCDSFAAELKRELRIHFKRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEU1</accession>
    <name>A0ABV2AEU1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000016</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000003">
        <property type="protein sequence ID" value="MES1917979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="87"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="226"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1917979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="281" mass="32507" checksum="7697520A3CEB477C" modified="2025-10-08" version="1">MLIIIILLITMSSSQENKCEVPFLYGGKIVSTGNNTYELSCYPFFYSLIVGKILDGNETKIEFKCIDNELVNDEIPLDSVRCALDPFTLLLTILLSIVFILVMSMFCYCLGSFIWKKRNILYHRNPARYPLRDITSMNNENIFNTELENTQSTNVDYIENLTIRSVNENQQESLRQHLNGICSQNSNIRNQRLNVLTENLTDRENVIDENFRNERQISVSNGCEHITRERESSNTYETESHEEGGNENNDSNVRISGRREIFPDYPPPTYEESVLVILFNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFA6</accession>
    <name>A0ABV2AFA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">CRISPR-associated protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CAS1</name>
        <name evidence="5" type="ORF">MHBO_000335</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the terpene cyclase/mutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000047">
        <property type="protein sequence ID" value="MES1918357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032696">
        <property type="entry name" value="SQ_cyclase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018333">
        <property type="entry name" value="Squalene_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002365">
        <property type="entry name" value="Terpene_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01787">
        <property type="entry name" value="squalene_cyclas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764:SF20">
        <property type="entry name" value="LANOSTEROL SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764">
        <property type="entry name" value="TERPENE CYCLASE/MUTASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13243">
        <property type="entry name" value="SQHop_cyclase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01074">
        <property type="entry name" value="TERPENE_SYNTHASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Squalene cyclase C-terminal" evidence="4">
        <location>
            <begin position="20"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="39805" checksum="196227BDCB2A8133" modified="2025-10-08" version="1">MWDYVWIAEDGMKMQGYNGSQLWDTAFAVMAILKHPNGIEFSAAIRKAYDYIKKTQVDDDVPYRKNFFRHRSKDMWPFSTKSHGWPISDCTSHALESVLLAHEKNVVAPKDRIPDERLKGAAKAIIAFQNEDGGYPTYEPKRGSSFLEYLNPAATFGKIMVDYSYVELTSSAVCALCLYAKTTEDELADGIRVAVGKAVKYIKSEQREDGSWYGSWGICFTYAIFFAVRALVAAGERNCREINKATQFLLGKQREDGGWGESYKSAETKEYVQLSSQVVNTSWALIALMEAGCEDVEAIERGIDLLMSRQTADGDWEQEQISGVFNANCMITYTSYRNVFPVWALSLYAEKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL7</accession>
    <name>A0ABV2AFL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000449</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="31591" checksum="BDC323D5D51636C1" modified="2025-10-08" version="1">MEFKLPQKICGEPRQSILIRTNEDKAKFKNKPITFGSNAVCVKPNAKSTRNRFMLPDDTDYYNSQIDDSSDYEDSTDDKEQILKPLAIKKAFQTNQTAWHLTRLPFEEFLGQISGELNNVLSSKYILLKKYIIDSKTNIKNSESKKYDKNVAVGAWDKIPAFNRLNFGPGAKLDPTLPGRANVGKFYSAEKSGRCVGIEKPKIEDDKELKLELGAKICELEKKLKDSDEMFQTLKNYELLQRKFLGSTEENHKKNTRILGAMNLALFMLSFAIIGCAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS5</accession>
    <name>A0ABV2AFS5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000081">
        <property type="protein sequence ID" value="MES1918545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.530">
        <property type="entry name" value="MyTH4 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000857">
        <property type="entry name" value="MyTH4_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038185">
        <property type="entry name" value="MyTH4_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036020">
        <property type="entry name" value="WW_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45876">
        <property type="entry name" value="FI04035P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45876:SF8">
        <property type="entry name" value="FI04035P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00784">
        <property type="entry name" value="MyTH4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00397">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00456">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51045">
        <property type="entry name" value="WW domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51016">
        <property type="entry name" value="MYTH4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01159">
        <property type="entry name" value="WW_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MyTH4" evidence="3">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="191"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="159"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="227" mass="26123" checksum="CB28343F67B1D3A0" modified="2025-10-08" version="1" fragment="single">LKECFEMEKLRNEFYLQLIKQLTNNPNQGSVKKGNDLMILGLNTFGPGSNFENHLYYYILKHAPVSDKQRFLIALQTIMLEPKKLGKIPDGVLFDDIVGGKNVLQPQFTDKVPPGAPSWQDLLNSWDEQDDDEDEIMFTATRQNLKARKTSKMVTMPKNTTLNKPVEPKEKVGGWGMGNKKSQTIEPKIDRTYSGPWVEYMDNESGYPYYYNTETEETTWEKPAEMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG81</accession>
    <name>A0ABV2AG81_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">uroporphyrinogen decarboxylase</fullName>
            <ecNumber evidence="3">4.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000621</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the uroporphyrinogen decarboxylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.37" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000108">
        <property type="protein sequence ID" value="MES1918696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00717">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00218">
        <property type="entry name" value="URO_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038071">
        <property type="entry name" value="UROD/MetE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006361">
        <property type="entry name" value="Uroporphyrinogen_deCO2ase_HemE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000257">
        <property type="entry name" value="Uroporphyrinogen_deCOase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01464">
        <property type="entry name" value="hemE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21091">
        <property type="entry name" value="METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21091:SF169">
        <property type="entry name" value="UROPORPHYRINOGEN DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01208">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51726">
        <property type="entry name" value="UROD/MetE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00907">
        <property type="entry name" value="UROD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Uroporphyrinogen decarboxylase (URO-D)" evidence="7">
        <location>
            <begin position="141"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS00907"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="354" mass="39981" checksum="161DF4A2351968A4" modified="2025-10-08" version="1">MPEIEESLFVKAALGKEITKFPIFIHRQAGRYLPEYRKTKGKKNFFQLCKDPETVCELTLQPIKKFDLDAAIIFSDILVIPQAIGFEVNMVPQIGPLFKEKVTIENFPETNFRIDLRQKLSYVYEAIKLTRSKLKPDLPLIGFTGGPWTLMSYMVEGKSSKNCVSAKKWLFRCPEKAKLLLNRLTSLIVNHLLLQMEAGCQVLEVFETLAGHLGPKEFRNFVLPCLSRIVSELRAEMGNLGMGAVPIVLFPKGANHSLKEVSETGCDVIAIDWTISVNEARKIVGDDVTLMGNLDPAVLYGDEETIKKETKEMLTSLKNKRFIANLGHGMLPDMDFEAVRIFVDEVHSVKIDKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ8</accession>
    <name>A0ABV2AGJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000541</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000091">
        <property type="protein sequence ID" value="MES1918594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011387">
        <property type="entry name" value="TIF2A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13227">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13227:SF0">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0853">WD repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="34325" checksum="749CBFA18BDA10D0" modified="2025-10-08" version="1">MSIPQTILIREEAKYSFSPANKSGPALKPFLEGQTTRKIVLSRDSSLIGVIDNFSIYIYKSATFEKIYSFKLVTAERCEKIESDNKKLEEMITKIQLNNSPNTDAIMYKRRIEREYIQEIDISPNNRFLVSLNKFQNAEEPNLTIRDIVHDKIIFALIMKNFNTENWPFFKWLDFEGKSIFCYNEKNKLLFFNADDAPEKTTIFEPFLVFDASATEGESANKNTSFLLKSFSMSASNGRIALFLKSKNKECLSKVTVYNFPKFCYFIFKVFRDRLEAKDCQLEALSLVGKKMGILY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM2</accession>
    <name>A0ABV2AGM2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">CorA metal ion transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MNR2</name>
        <name evidence="7" type="ORF">MHBO_000722</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000132">
        <property type="protein sequence ID" value="MES1918820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12829">
        <property type="entry name" value="Alr1p-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.20">
        <property type="entry name" value="CorA soluble domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.340">
        <property type="entry name" value="Magnesium transport protein CorA, transmembrane region"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044089">
        <property type="entry name" value="Alr1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045861">
        <property type="entry name" value="CorA_cytoplasmic_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045863">
        <property type="entry name" value="CorA_TM1_TM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002523">
        <property type="entry name" value="MgTranspt_CorA/ZnTranspt_ZntB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21535">
        <property type="entry name" value="MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21535:SF51">
        <property type="entry name" value="MANGANESE RESISTANCE PROTEIN MNR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01544">
        <property type="entry name" value="CorA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143865">
        <property type="entry name" value="CorA soluble domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144083">
        <property type="entry name" value="Magnesium transport protein CorA, transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="481"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="518"/>
            <end position="538"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="544" mass="62247" checksum="53F37DF9D7B1D828" modified="2025-10-08" version="1">MRKPNKEKPNKTKELICVRIAKMGVGFIEVGPKDNLSTVRAIISGTFDDVQKEMLTASFNFLYNGFIISKRQEEKLIPVEFLKLSRRLTSDGKRPHRILEVRPKMKDLDLAKLTYSTEDKSDNEMSSLIHEPYVSPNLSNKNIGGVHFSNEPEHKEDMHLELPPTVLSRAHDRKHLKIKASSSDSFTVSNLSGEKRTRRSRLDSNRCRKRMTLIGYPYGSKATSLEYIESIDQSATEPFWLDIQAASHLEIERIGKVFGVHPLTVEDISLRDSREKLEIFSQYLLVIFYSEHFIMQRDAVENPISLLLFSNFIISFHNDEEKSIEHLISKITKLETISIRSPSWVCYAILDSVVDDLIPVADKVLNEIILVEEIGHTFGAEDHNEFLARVSKTRRNITMLRQRLWPKQNMLSNMISKTYRNFLRDVSLPYFRDCQEHISKMINSLEIQHENLNNIQSMFLAKVSLEVAESSHKLDNVAKRFGSFATIMLPLTFVTGLLGMNVTVPFQTSIADRDPHAIAFYVVLLVMVICGAGASFILRKKGLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM5</accession>
    <name>A0ABV2AGM5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 4L</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000701</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000127">
        <property type="protein sequence ID" value="MES1918797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="117" mass="13385" checksum="918279FB7DB4BACB" modified="2025-10-08" version="1">MSLTVFFASIFIDGKTIANKSANLGFIGSIFLIVMLIRLFYALENSIRKFTFLVIFLDFSLIVVHFLFAFKAQLNFDVVFAIKEIYFVSTLTALAIIYIIEFNNEEKINVGIETAEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM6</accession>
    <name>A0ABV2AGM6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000673</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000120">
        <property type="protein sequence ID" value="MES1918762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050629">
        <property type="entry name" value="STE20/SPS1-PAK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48012:SF26">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE DDB_G0283821-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48012">
        <property type="entry name" value="STERILE20-LIKE KINASE, ISOFORM B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="785" mass="90050" checksum="1968780022435F3F" modified="2025-10-08" version="1">MQKFGGSFEEHLVAKYIFKVLNGLNYLHKEGVIHRDIKAANILSTKDGNMKLADFGVATKLGKESKSNHLVGSPYWMAPEAVEISENMTSACDIWSLGCTTIELLTGKPPYFELSQMQAIFRIVEDECPPLPKKMSQDLEDFLKCCFHKIPKKRATALQLLQHHWIVKNNKDENKGMTKTVFSKISWGNYVEKSKSSFSNNLETNKLLEKYEDTENDEILDIETSFNTKSQEAQIVSKEKSLTEKDNCFEDIPFESINKELKLEKELNLRDAKISFGKLSINLDETEFCDVMEEINDYFKEKNIIKQIVNEELIEENAIKMIRCAINNIYSYSSNIAFLGFVEQVAEISRKTFFRLCLLGLPQFICSVTSKTGNFKVKKSTLDIIETYFIPTETANGNLRDMFISNGGIEIFSNYFNGDFSLYEVLMARATNCVFEVIEESKKLKIAHCQILSENGFYHKLAFYLSKLANSRTPDIIYKISILFRHASQCDNAVRKILCEEIVLKCFILFLKRPEERIMLCGLSCLKNLTKCPILFTNIKESGLMANLITMLSHPNEEVQKEVFKVVYDIIKIQSWLQEAAASMFIVPALIRFVESDGPLKEMAFSLICKMAFAGPISREHLRKNMAVELYLLMLKIPHWSSIAIDSLAKLVACETKNEICFREKNNFDKITEHLEKSAVKTFEKSVHSIYKLSNASNLFRELASQDQNFLQIIEKRLNEISDVQSKLSVMKIFRCILDKEFLSIDAKSNMNKILNGLTFSKRVIVSDFAKKLLEQFFDNNTVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ4</accession>
    <name>A0ABV2AGQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000394</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="10026" checksum="584F6BC6B4924AB3" modified="2025-10-08" version="1">MSSTFPRASPSCVKLTGVAVPDQTGVGAAGVIVPPRSMFSVARSWAERIITSGSGVYFSARRCSFGLLVCCPASGMLSQSCRVNEASCFLSSLKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW4</accession>
    <name>A0ABV2AGW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000748</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000139">
        <property type="protein sequence ID" value="MES1918852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046671289" evidence="2">
        <location>
            <begin position="19"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="27253" checksum="D331259D6E681C60" modified="2025-10-08" version="1">MSLVFYFVFATIAKSFIAEECDVPNPAFVSTRTTGNGSKITKKKVGTGYYFVETISYFDLIHIDDSLVRKSRVSCDVSGQWNFLLVNFSSELSKQDIFSPDSFIRNNRTFKVKYPASIYDYNSHDYCLILLPRNSFLVAPKTGMFETTSGRVAYLGKSSFIGKCYPGYVVKNTDARIVSFSIECNKGEPDKVVECVWKKNIKYRLPKGEFWNQSFILTLLTLDAFGFLFGFSYRIFLAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH91</accession>
    <name>A0ABV2AH91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">F-actin-capping protein subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000907</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterodimer of an alpha and a beta subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Cytoplasm</location>
            <location evidence="1 7">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the F-actin-capping protein beta subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000182">
        <property type="protein sequence ID" value="MES1919030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.210">
        <property type="entry name" value="F-actin capping protein, beta subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037282">
        <property type="entry name" value="CapZ_alpha/beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042276">
        <property type="entry name" value="CapZ_alpha/beta_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001698">
        <property type="entry name" value="CAPZB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043175">
        <property type="entry name" value="CAPZB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019771">
        <property type="entry name" value="F-actin_capping_bsu_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10619">
        <property type="entry name" value="F-ACTIN-CAPPING PROTEIN SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10619:SF0">
        <property type="entry name" value="F-ACTIN-CAPPING PROTEIN SUBUNIT BETA ISOFORMS 1 AND 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01115">
        <property type="entry name" value="F_actin_cap_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00192">
        <property type="entry name" value="FACTINCAPB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90096">
        <property type="entry name" value="Subunits of heterodimeric actin filament capping protein Capz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00231">
        <property type="entry name" value="F_ACTIN_CAPPING_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0117">Actin capping</keyword>
    <keyword evidence="5 7" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="4 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="30645" checksum="49AF81275E7705A1" modified="2025-10-08" version="1">MSNDKIVRAMNIIKRMPPKHVEKVLKAMINIAPDISEELLQYVDQPLKIVEGDSGRPFVICDFNRDGDSYRSPHSNKYHPPPNDFKPYYPPKRLREMEVSANAIFDQYRHLYYQGGVSSVYFWDLGDKKGFASCWLVHKMIDGERDLDSGYWDSIHVFEVLPKGAHEHIYQLTTTVMVEVAQRTEEMGPGTISGSKSRQLERVCEAKDDGDHIANLGSMLEDNELDLRNAIQTIYIQKTREVIGSMLTFEHDYGTGDMLGDAIKKAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC9</accession>
    <name>A0ABV2AHC9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">3'(2'),5'-bisphosphate nucleotidase 1</fullName>
            <ecNumber evidence="10">3.1.3.57</ecNumber>
            <ecNumber evidence="2">3.1.3.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">3'-phosphoadenosine 5'-phosphate phosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Bisphosphate 3'-nucleotidase 1</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Inositol-polyphosphate 1-phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">BPNT1</name>
        <name evidence="13" type="ORF">MHBO_000601</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>1D-myo-inositol 1,3,4-trisphosphate + H2O = 1D-myo-inositol 3,4-bisphosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:70319"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58414"/>
            <dbReference type="ChEBI" id="CHEBI:83241"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8">
            <dbReference type="Rhea" id="RHEA:70320"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15553"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58282"/>
            <dbReference type="ChEBI" id="CHEBI:58469"/>
            <dbReference type="EC" id="3.1.3.57"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="9">
            <dbReference type="Rhea" id="RHEA:15554"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the inositol monophosphatase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.57" evidence="10"/>
    <dbReference type="EC" id="3.1.3.7" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000103">
        <property type="protein sequence ID" value="MES1918667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008441">
        <property type="term" value="F:3'(2'),5'-bisphosphate nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.540.10">
        <property type="entry name" value="Fructose-1,6-Bisphosphatase, subunit A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050725">
        <property type="entry name" value="CysQ/Inositol_MonoPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020583">
        <property type="entry name" value="Inositol_monoP_metal-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020550">
        <property type="entry name" value="Inositol_monophosphatase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43028">
        <property type="entry name" value="3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43028:SF5">
        <property type="entry name" value="3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56655">
        <property type="entry name" value="Carbohydrate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00629">
        <property type="entry name" value="IMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00630">
        <property type="entry name" value="IMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0452">Lithium</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00040342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00041815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00044465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00044478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00044519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00044544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00044554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="316" mass="35033" checksum="D4BD5ECC254AE4D4" modified="2025-10-08" version="1">MNIINKKNNGLTNNAIKIPKIKLSRLISTCISLAHQAGNEIRKVHSQTNYKIREKGTPQKSSFDDPQTEADIRAQYIIQNSLNILYPSLKVIGEEGLTKPFEKPPCFVPPRNDIFSAKIEEEMSVKNIVVWVDPLDGTSEFIKGNVSAVTVLIGISFFGKPIAGVIAQPFSDLKNGEFLMIWGVNTAKQKIVSSNFGNVVDTRKKANLDNLLITKSHLDDEYRTYLRGLGKRELIKMGGCGSKMISLLKKEANGYVFPIQGTKKWDTCAPQAILEAAGGIFTKPNGENIEYSDENVENEEGFIATLDGEHAQFVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT2</accession>
    <name>A0ABV2AHT2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000720</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000131">
        <property type="protein sequence ID" value="MES1918817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15481:SF0">
        <property type="entry name" value="LD23870P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15481">
        <property type="entry name" value="RIBONUCLEIC ACID BINDING PROTEIN S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="12"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="93"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="116"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22226" checksum="DF8EC29C5C4C8BE0" modified="2025-10-08" version="1">MDKKVKRTKKPTAIRIRNVSRNVTEAHLKEIFSIWGKPSKIIVPIDKKVQIALGYAIVEFDASTPADAALRAMDEGEIDGKKVIISFVEKKSSLSEKRGSAAKPKNSQKTKTEKSSRKRSRRSPSPKRRKRSPSPQKRIRSPSPQKRIRSPSPQKRTRYRKNKSPSLPKKQKDEQVKYRGGKTKRRSYSSTSSDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT3</accession>
    <name>A0ABV2AHT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000918</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000186">
        <property type="protein sequence ID" value="MES1919044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="546" mass="62065" checksum="7196C88501B9A467" modified="2025-10-08" version="1">MDKTDIELQLEQIGSYKTSLLYNSGVKPSSDSVIDIVHYIRKLPLISFKQPSVIYTEIKFYDESDLKPTALAGYQNAILNFENNLMPKALDLYQCAQFFEHLIVNRKKNENKIKMALSETNEHLDKIKEFTEDLITTCWSQTIPQIPDAQDVLNKYRFLDNEDDSENFTVRTAQPKINTQNFGTHNIAKQTIRFSNPMSLCIDLFSIFSEYRSFTANSVPKYILFPSDSPDVAPSLDTNSLFGRGARVFCPKRPLDVKQMLCSGSNATRKSISLFKYVFLLEIVNSGNLKMSAPSIDCGNTKNNKMNKNCLATSTAVPRAISRLKESEFLLHKKISNGVDQIEEKVNSLVERLSALMSRTEKDSAQKQLVVECTTECERMKANLNLLKSSGAVETASNEVVSDRCEQLVYGPKVWCEMGAQNEAFREGMSNELKVFVERNLSGEDKEVRELRLFVENKISLEREIGEKEKNAESEVKAAFDALLSLNERMNNPEITVGELEDLKTVLLFLERVHNDIEEEASLKIEKVFELSFENGYAVEMEKRVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV6</accession>
    <name>A0ABV2AHV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000897</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000180">
        <property type="protein sequence ID" value="MES1919019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019164">
        <property type="entry name" value="TMEM147"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09767">
        <property type="entry name" value="DUF2053"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="170"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22560" checksum="00383E5C8EE52D84" modified="2025-10-08" version="1">MAAFHFLNHLIVFYLVIQFTHSLFKMRSSEILLFEFRNMIFYSFAILLKGFVTASFIDPISLPYMFVVKDFIVHVLNFLNYFAVKSILKRSEYLGAPDKKLRILATSTSIFLTEYLVYHLLDVYVIAIKTEFKVEALYLNAAGILRYILSILKVYVVWEHLYSRRRNSTTYNSLITLSLVLYFGDTLFYRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI46</accession>
    <name>A0ABV2AI46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001202</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000264">
        <property type="protein sequence ID" value="MES1919355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047340074" evidence="2">
        <location>
            <begin position="17"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="228"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="31211" checksum="A65F184511C0FFDA" modified="2025-10-08" version="1">MLFVIYLSVFLNICQNIKIVNNYKQFTPKSQMTVQSFINCREIGQNFKLKSKIVIPKFCGIDPNSVKMQVKLAERYLLHSLNIIVMFCVEEMDLGVNACTPGCDHQNIRNKILKTIQNGEYILVAMVSQSCFNNTRTVSKSNFCKKSGFFMFKHGEKFDLTLAYDFAYVLRMEESNYKAAKRNLEQPGIDTFFLSERSSFEICIMLKSILKEDLELKRDCLTIEKEEFLFLRNLLLFISCFLIFLSLKKLIPIFYKKLKKGYNKKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI72</accession>
    <name>A0ABV2AI72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001003</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000208">
        <property type="protein sequence ID" value="MES1919139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17474" checksum="5A4626ED41A8FD93" modified="2025-10-08" version="1">MGTLYTKIWTILDSKNKIADFCKNLCPLNKENGFNVDLIESGLNATVYCQNKKFVKIGNKFFDSVELKCYMGINYVDLKRAKKIDCEKLDLTKCTNFSKESILDYHYECNIGNNGQIKKLNFQCTEMFINKIINIDWKEKVLTACRSFIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII3</accession>
    <name>A0ABV2AII3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">60S ribosomal protein L13</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPL13</name>
        <name evidence="5" type="ORF">MHBO_001313</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000307">
        <property type="protein sequence ID" value="MES1919490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00499">
        <property type="entry name" value="Ribosomal_eL13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001380">
        <property type="entry name" value="Ribosomal_eL13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11722">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11722:SF0">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN EL13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01294">
        <property type="entry name" value="Ribosomal_L13e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="184"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="24907" checksum="4E746B67AC4B9B37" modified="2025-10-08" version="1">MVKHNNMIQNQHFRKDWQRYVRTWFDQPAKKKKRRLLRIAKAKKMGPRPLHSLRPIVRCPTIRYNSKLRLGRGFTLDELKAAKLNPRYAQTVGISVDHRRRNKDENEMKRNVDRLLQYKEKLIVRPIGKKDRSKYNKEIRETTQILDKMVVPFVVEKVQLSYKTSSEVEKLRENGSVYTQLRKALKENKSKGRRKKRQQEKEAKKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII5</accession>
    <name>A0ABV2AII5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001296</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000300">
        <property type="protein sequence ID" value="MES1919468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF302">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-5 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00275">
        <property type="entry name" value="G_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0807">Transducer</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12684" checksum="2A6DB48A40CA5927" modified="2025-10-08" version="1">MDESINLFEDISNSTWFSESIIVLFFNKKDLFEKKIGSTPITTFFKDYCGDPKSVSESINHIRKVFLNSSQHPEEIYTHVTTATDSKNIDVVFNAVKDTILKTNLKRGGFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII7</accession>
    <name>A0ABV2AII7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lipin-3</fullName>
            <ecNumber evidence="3">3.1.3.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">LPIN3</name>
        <name evidence="3" type="ORF">MHBO_001168</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.4" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000254">
        <property type="protein sequence ID" value="MES1919314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008195">
        <property type="term" value="F:phosphatidate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026058">
        <property type="entry name" value="LIPIN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031703">
        <property type="entry name" value="Lipin_mid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007651">
        <property type="entry name" value="Lipin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12181">
        <property type="entry name" value="LIPIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12181:SF12">
        <property type="entry name" value="PHOSPHATIDATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16876">
        <property type="entry name" value="Lipin_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04571">
        <property type="entry name" value="Lipin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipin N-terminal" evidence="1">
        <location>
            <begin position="11"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="Lipin middle" evidence="2">
        <location>
            <begin position="171"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="31975" checksum="7C28A11B13ED1CC9" modified="2025-10-08" version="1">MTNMFSNAVWTVGKAVRNMASSVLDWNTSTFSGAVDIIVVRHRTENGFIYKCTPFHVKFGILQVLKSSERVVNIEINGQPSPLKMKLSKNGFAYFADEEDWYCESVEEDVVSENSESSGKTKENKENNLRRVKSLTDIVKIKREKDYPKSIEHANKYSNQIEDRLQISKLQLSLCGEDLNLGENRRLPISECKLLFEKSKIKIDDFLENPKIVFNEKLAVLFGNQVYPGSAFVPFVIGAMTFGSDKFGFLFASFTNYVDRLYINRLKYFFANNVLMFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ88</accession>
    <name>A0ABV2AJ88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001364</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000324">
        <property type="protein sequence ID" value="MES1919554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45994">
        <property type="entry name" value="FI21225P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45994:SF1">
        <property type="entry name" value="FI21225P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="181"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="331" mass="36929" checksum="7D43A338AD220111" modified="2025-10-08" version="1">MSSGDYDNLLSENSETEELGKAIRKGLEKNKKDFFESVSENAGTAEQIETLREKLIATKIAISVSSICHKTSFIKLEQNSEQKKDFYENRNSKNEDKSLLSNSKFSNFALAQTLILILHNLAVPQLSRGALAQQGGVSALLSLWRNCKNEKLSRLSANGISKLICSTNPNLLKFKQSFECARAIISTLENAEHELEQFEALRALTNIASVGEEERSRLIENGVWERAKEGLFCENFRVQRSAIELMANLLLCEKGLQKMADSPAELKIFELFCKSDDFKSQSAAVRVLAFVGYQKPLLIKNGGLDKSVFERMAESEDGSVRGFAKEVAELI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC7</accession>
    <name>A0ABV2AJC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Actin, cytoplasmic A3a</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ACTA3A</name>
        <name evidence="4" type="ORF">MHBO_001190</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the actin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000260">
        <property type="protein sequence ID" value="MES1919342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10224">
        <property type="entry name" value="ASKHA_NBD_actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020902">
        <property type="entry name" value="Actin/actin-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004001">
        <property type="entry name" value="Actin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00022">
        <property type="entry name" value="Actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00190">
        <property type="entry name" value="ACTIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00268">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00406">
        <property type="entry name" value="ACTINS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00432">
        <property type="entry name" value="ACTINS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01132">
        <property type="entry name" value="ACTINS_ACT_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="392" mass="43827" checksum="F36A0590A7CE3E84" modified="2025-10-08" version="1">MRISKVKLEQTTKLNIQKPNQSIALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPKHQGIMVGMGQKDAYVGDEAQSKRGILALKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVGIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILCESGYSFTTTAEREIVRDIKETLCYVTLDFETELEKSNDSSEIDRNYELPDGRTLTIGNARFRVPEVLFQPNLIGNESEGIHKLAYNSIQKCDVDIRRDLYSNTVLSGGTTMYPRLDERVQKEIAALAPSTISVKVIAPPERKYSVWIGGSILSSLTTFQQMWVTKSEYDESGPSIVHRKCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC8</accession>
    <name>A0ABV2AJC8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_001557</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000401">
        <property type="protein sequence ID" value="MES1919791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05144">
        <property type="entry name" value="RIO2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030484">
        <property type="entry name" value="Rio2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015285">
        <property type="entry name" value="RIO2_wHTH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018934">
        <property type="entry name" value="RIO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000687">
        <property type="entry name" value="RIO_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45852">
        <property type="entry name" value="SER/THR-PROTEIN KINASE RIO2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45852:SF1">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE RIO2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01163">
        <property type="entry name" value="RIO1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09202">
        <property type="entry name" value="Rio2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00090">
        <property type="entry name" value="RIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RIO kinase" evidence="13">
        <location>
            <begin position="64"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1919791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="310" mass="36133" checksum="143AE79EE684746C" modified="2025-10-08" version="1">MKLDISNFKFLANADFRVLTSIEMGMKNHHLVQFDLIQKISKLSPSATTKSLKTVHKYKLVVHEAKKCDGYRLTFLGYDFLAINALTKRKSVEKIGSQIGVGKESDVFKVTNERNEIMVLKLHRLGRISFRTIKDNRDYLGKRSNANWLYCSRLAATKEYEYLKVLHEKDFPVPRPIDCSRHCVLMDYFEGIPLNNLKTIYDADIYYKALNGVLFRMRDFGYIHCDFNEFNVLVSPKMIEKGLKEEKRIELLKEMGEKSYNNNLFEELGLLVIDFPQMVSSSHENADDLFGRDETCIKTFFMKRFGLEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJD9</accession>
    <name>A0ABV2AJD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001566</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000404">
        <property type="protein sequence ID" value="MES1919801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9048" checksum="86AEF8169139C584" modified="2025-10-08" version="1">MENNDFEHLNGISDFEKTKFYYKTKMADFSNKDQLQKNKESLLISSVFTNRNSAEDEAVLKNSEKTIIAFIDEIADFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ7</accession>
    <name>A0ABV2AJQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">26S proteasome non-ATPase regulatory subunit 11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PSMD11</name>
        <name evidence="2" type="ORF">MHBO_001652</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000439">
        <property type="protein sequence ID" value="MES1919907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050871">
        <property type="entry name" value="26S_Proteasome/COP9_Components"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040773">
        <property type="entry name" value="Rpn6_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10678">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18055">
        <property type="entry name" value="RPN6_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="26S proteasome regulatory subunit Rpn6 N-terminal" evidence="1">
        <location>
            <begin position="24"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21338" checksum="A655D3EEF0F72E51" modified="2025-10-08" version="1" fragment="single">MDIDTKSNIKSLAINKEFERAIALKDKIEALQILRILVLRQDDTDIAPVEIKEKAIEKIASLYLQTKNEKKLPSILKDFSQFFASVSKAKTAKIVRNLLNTISKNSENAEMQLSFCDESIKWCQREKRSFLRQKIEARKAELLLEGRRYRDALAILRRLTSEAKQVDDKLYLIEVSLLDSQAHSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS7</accession>
    <name>A0ABV2AJS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Negative regulation of wound healing</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cls-3</name>
        <name evidence="1" type="ORF">MHBO_001663</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000443">
        <property type="protein sequence ID" value="MES1919920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11771" checksum="84DA57D0A0663597" modified="2025-10-08" version="1" fragment="single">MSVIDQIIVRRKVNVSRDQLYLLKNVLIVQIYDLRSIVVKEVCKLVNNLSKTIPEQISPFFGAYLNALFSRVYNSIRAIRDPCTDSVRTLVRNIADTRCVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK02</accession>
    <name>A0ABV2AK02_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RRP12 HEAT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001388</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000331">
        <property type="protein sequence ID" value="MES1919582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012978">
        <property type="entry name" value="HEAT_RRP12"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08161">
        <property type="entry name" value="RRP12_HEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RRP12 HEAT" evidence="1">
        <location>
            <begin position="200"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="406" mass="46655" checksum="C06A6FEA98AF9955" modified="2025-10-08" version="1" fragment="single">MTSKFENVLLSTINDNLETRKSSKKELLDFIKSDSSININKLVFGFYNSFLSTTENTKRKSIALNTILSLLWIFDEETILKILDKIAEQIKNNDNPIAAIGCYKGIVDCVDNFDHFSEFAPILAKSLANFLILLMPDTTEIDLKNAEELKAFCFSLKSVLAITEKSPIEEKEQFLKSIVNSFFVFLGHCTNRKILVVLSDFLAFLFSLPNLTEQNLQNFAEEVLESFDKPITIPHALKISNSILSQNPKNANFSQNTKFAIEELIKKVALVYKSDLSNKNFVIQKLAKNNLVEALRSFGVELFLKALPVQTEERKWILKMLKSTKFSHGLQFFFDDLYSLLLSENNKIIKLDFTTNFERFGQSLAKNNLIFAVFECLPNFCENPNDICRFEDFMKILKNLYEFYVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK34</accession>
    <name>A0ABV2AK34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001767</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000487">
        <property type="protein sequence ID" value="MES1920041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047340075" evidence="1">
        <location>
            <begin position="22"/>
            <end position="986"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="986" mass="107710" checksum="E1D3812FFE1DA00C" modified="2025-10-08" version="1">MNSNHSFLILIYALLLKLIDSNCVVSIGSTVDAYSFPSMVPRIDNSVIYDRELALYNCKDQGQYMLNYDGNNEDAPYFLGICLNGKMMSTANSSLFITENIDCDPVPNFDGCILDYTSSDIEIIPDYEPNNTIKNNHSLIAKCIGPGDWFPLQIKCQSGTINFFDAKNNNIGEAGAKDLCERAGSACDTEDARPLINLVNTTPRKILRDDTLASSCYETQTSLDIVCRNGGFVIRNIDNSELSLNVQNVVEICLSSGGGPSSCLIDIGNNVKVLSVPSREERAHETGVNLGDQLIYVCDTPNFVLDDVYNNGMQLNTVQIECTDSGLVGPDGPIKAGLDCVQAACRGFCLWSELPVMLQVDAGDESDAETFLQNAQLPAHCFGAEWYDLTVECTGTFWSVKDNGIDVTNSLSDVCYRAKRGCNLRNVALLGIDSGTLPEKIPHGQVVDIDCFGGGGNIRLVCDETELKLNNENLPNAIANFSNIAKHCEYAFPGPYQCTIEIGTGVKVYVAETGEERTNESHVHLGDHFVYTCDTQNYLLDNVFGDSTRLGHVEVVCTANGLTSYGRQVHAGLNCISAPAVICLTSDLPDQLNVPLPDKRVTGFVHGDVLEGFCGEADWHPIELECGNNLWDVSVNGAAVSNLLILCAQVTGGCPTSQIEQLAMFQNIAEYELDSSELTGTCFGSYNQIVFTCRNGRFQVHIDDQSSEDASFENVASLCGFNYAGSSQCTIEVGPGVHVYAIPSNEVRTNLTPVQFGDSFMYTCDQEDHVLSDVFSDGSTRGYIEVVCSFAGLIGSSRLVKPGVDCVHATPTTRCLSSALPSYLEYDKQENVNTFISGDFFGANCSGSGNWYNFSVRCNDGQWEFFKNGEVVSPTTAEETCNLARNSCAVSKAKQFAMFSEPAQGRILENTQISANCIDDEERDLQLRCVENEFEFKARNLTWRQVSFADIAAHCGFVYAEHSEIEAEPNNENVEANSVRIGLDEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK59</accession>
    <name>A0ABV2AK59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SNF2</name>
        <name evidence="4" type="ORF">MHBO_001614</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000424">
        <property type="protein sequence ID" value="MES1919859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bromo" evidence="3">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="11138" checksum="7F322C6D5BA74A7C" modified="2025-10-08" version="1">MHLDLIKSKIDECRYADVREFTDDCQLIAQNARAYNKNFPSAIESVENLMAVGQAALEKVALKHFTRNTNLWKNWTRAHEGRRYSRSRNFAKNSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH1</accession>
    <name>A0ABV2AKH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000535">
        <property type="protein sequence ID" value="MES1920164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="39263" checksum="4178721DF0AA9E9B" modified="2025-10-08" version="1">MSFKRRRIPFFRKIAHLNYAQVCYYLQDYPLQRYKFTLRHLCSADRLDCDQPKSRIGKVPENVAEFLETEREKAKIVDSCRASDIALAALRHAQMRENLFKFVCSRKRFLEGGDEKNYHDLNFYRDEFRMSEKSALLSYDRIILSFLGELYRCHLRVSLIRKATKRAMRKRLRIFNFLVGFFCLKKRIPKFSNAKDFSREQRKFRVALMGNRLLEEVAKTELLKRKLENVLKRYFLALRLSLSFHRKFISRLVWAGHVDRIERSRNLREKKLRGLIEVEEETFLKPYLSGFPKYVRKIKPDVFNTTDDFNIMKTFPNDLWGFFRSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKK8</accession>
    <name>A0ABV2AKK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001672</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000446">
        <property type="protein sequence ID" value="MES1919928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5981" checksum="46388810D5A304A0" modified="2025-10-08" version="1">MEFAKKLKLPVECPLLNAFFINCLKFNKHNLLLEHWDKFKTPGNFFNNKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP0</accession>
    <name>A0ABV2AKP0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">60S ribosomal protein L27</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001927</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL27 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000564">
        <property type="protein sequence ID" value="MES1920236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06090">
        <property type="entry name" value="KOW_RPL27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001141">
        <property type="entry name" value="Ribosomal_eL27"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041991">
        <property type="entry name" value="Ribosomal_eL27_KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038655">
        <property type="entry name" value="Ribosomal_eL27_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10497">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01777">
        <property type="entry name" value="Ribosomal_L27e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="143" mass="16462" checksum="DB57EA0342C2905C" modified="2025-10-08" version="1">MGKLNRKNKIIILLKGRHAGKKAVIIKSFDEGTTERPFPHCLVAGIERYPRKVTKGMKREDILKKSKVKAFFRYVNVSHVIITRYNVDINLSELTSYDFSDPSARADNRKRIGDLLTKRYLTASAKDKKVSDGNDFLFKKLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX6</accession>
    <name>A0ABV2AKX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Proteasome activator PA28 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001774</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PA28 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000492">
        <property type="protein sequence ID" value="MES1920048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.180">
        <property type="entry name" value="Proteasome activator pa28, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003186">
        <property type="entry name" value="PA28_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036997">
        <property type="entry name" value="PA28_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009077">
        <property type="entry name" value="Proteasome_activ_PA28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036252">
        <property type="entry name" value="Proteasome_activ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10660:SF2">
        <property type="entry name" value="LD45860P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10660">
        <property type="entry name" value="PROTEASOME REGULATOR PA28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02252">
        <property type="entry name" value="PA28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47216">
        <property type="entry name" value="Proteasome activator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasome activator PA28 C-terminal" evidence="4">
        <location>
            <begin position="74"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="15"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="38"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="26046" checksum="2ABD74088344E230" modified="2025-10-08" version="1" fragment="single">NFEKNQLTTEEILQGLPDFAKSQSSKNDSNGEEELEETGTKRKNSEEENGEFKKLLKTNSPAFEKMLVRQQSYVGCNTWISRLVKDLKSECLFFIKMVGSLKLWIQLNIPKIEDGNNFGVTIQEEIVTELASKENHAFNIMEEMMKYYSERARIVKRILKYPKFEDFKNALVEHDDRAFIMFRMDFLDMRNYYITLLDVIKKNYEKIKKPRGNGSSYHSMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY2</accession>
    <name>A0ABV2AKY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Mitochondrial GTPase 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001984</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Mitochondrion inner membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000596">
        <property type="protein sequence ID" value="MES1920300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016478">
        <property type="entry name" value="GTPase_MTG1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45782">
        <property type="entry name" value="MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45782:SF4">
        <property type="entry name" value="MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006230">
        <property type="entry name" value="MG442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G" evidence="4">
        <location>
            <begin position="108"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR006230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="281" mass="32851" checksum="10D2803FC3CA3F62" modified="2025-10-08" version="1">MSKYKWFPGHMTKYLREINQSQIKKSHVILYLRDSRLMETSRNKVLENVIKDKKILNIFTKSDLINLRSKDVPEDSYFYSRFEDNKNLIDFIKKYSDEKFISTFTVMTIIGLPNVGKSTIINSLKTRHNFYNKAKTSDVPCFTQNIDPYVVSRDPNIVLYDTPGIFPPVEQDFLSALKFSLVGTIDNKNIFFDDLSLARAIFLILNTVNCIKPLENTIASKLNWSNFEHFMRRLQRRRNLNKERAIIWLIGKYRKGAIGKFALDNPKLDSALLENKNFILS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL50</accession>
    <name>A0ABV2AL50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001839</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000520">
        <property type="protein sequence ID" value="MES1920123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15900" checksum="F89378DCA9D92F35" modified="2025-10-08" version="1">MSDKSEKSHQWSWLDDLDAPQWTDLANVSTKIEKPYNENSELFKTPQKSNFGVSSFAQSVDESATINKSNLFQIVAAEENAFVAAKEVPIRKYETTIRKYPKSEKGCTVYGTSIFRKIKNKKIFKVGEGDFTGAQIVCFGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF4</accession>
    <name>A0ABV2ALF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002173</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000711">
        <property type="protein sequence ID" value="MES1920508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051706">
        <property type="entry name" value="Glycosyltransferase_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32385:SF15">
        <property type="entry name" value="INOSITOL PHOSPHOCERAMIDE MANNOSYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32385">
        <property type="entry name" value="MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15488" checksum="C733FEF5A2C15F65" modified="2025-10-08" version="1">MQLTDPFGLTNAFMAVSPKHQFFHFLIEEVVNSDVGYLFPYPSIMFSTGPMFLNRAYWRYFYRRQIIVMPQKYFLTILKKTRGSTWHRWDARVVMFFYNSWRLLAVSIIFAIFFVYLLVVCCFSRIGAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ5</accession>
    <name>A0ABV2ALQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001933</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000567">
        <property type="protein sequence ID" value="MES1920242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8730" checksum="BEB2C8788BDC94B8" modified="2025-10-08" version="1">MNIALFLWVKFIDEITPIDFLCSKNEAADILRGVEKENKELQKVKAKQKVIVQSNKKVNSFDIMFPNGSENDKNES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR2</accession>
    <name>A0ABV2ALR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002092</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000662">
        <property type="protein sequence ID" value="MES1920424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="374"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="418" mass="47837" checksum="D6F93F1766399FC8" modified="2025-10-08" version="1">MIFILFNIVMSAICPKPKVFFKEIDISSQTKFVCHLNNSSVQTVCDMESQLPYFFENKSVSKRIYCYKDFSGTLFIVPDVVKAYRACTRIDFLPRGNFLTAKFGHCSQIFPDLYYGYCLLLEHRSKYVYNNSRNRGLWNFLCEDGVWKLINASTIPDNLFCKRTQLKSTEETTKPHFCQQSFAFESLFYTFLDERTQKSSKITPLDTLKCAYKGKSPTAIVESIVKNETARGCRKPLVLPQKYAVFVVYDDCLVSDDLERVLSKCVATLSTGFVFANRKPEQTLLCGEDGISPRVLRVIREPLSDGCKVNAIENGSYIYGCSKEIERGICKYKCAANFYTAANIRYGVIVCTRKGAKYLFDSTPSCDNQQILQFLWIVTGISGFLFVWIVLYGLYFKEKCCFKPKIAEETKVLSLEFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS3</accession>
    <name>A0ABV2ALS3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002276</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000773">
        <property type="protein sequence ID" value="MES1920623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00403">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023674">
        <property type="entry name" value="Ribosomal_uL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028364">
        <property type="entry name" value="Ribosomal_uL1/biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016095">
        <property type="entry name" value="Ribosomal_uL1_3-a/b-sand"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36427">
        <property type="entry name" value="54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36427:SF3">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL1M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00687">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56808">
        <property type="entry name" value="Ribosomal protein L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="292" mass="33276" checksum="D935BFAFAF77A7DA" modified="2025-10-08" version="1">MIKIRNGFYKEKPKLRKIMQKFPRFIKLNAENENSAKPKFGPQINLEQRKFLNKKFPLKKMHLVDAVKYARRLAPNKGESLEVPNFNFCQFLQIKYILNLDPRNSNQIIRAGILLTHDHGIKKNVAVLCAEDEVEIALKANPIVAGSQKTIDYLNDEENLKKVNFVVATAKGMGLLPPIARKLGMSGKIPNRNMKTLVLDDNLEETIKNATSKLVTFHTKRLSIASFAVGTFSMCDQKLTDNIKKASEKILQLKPEKVSKKKYIKNVYLKSTFGRSIRVFSGFPPFIQISNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS5</accession>
    <name>A0ABV2ALS5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002277</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000773">
        <property type="protein sequence ID" value="MES1920625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="63"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14255" checksum="93C40FD5277CE28B" modified="2025-10-08" version="1">MKLRTRKQIRENEEKIYLLRNRKIHVDKKKMSGKNVPVAALKIRSQNELLSSKGKERLHKKTPLKETNEKVKPPKFSKKLNLSQNKNFERKSKKLRERSFERDILGTSIAIPLCDVIDSFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA8</accession>
    <name>A0ABV2AMA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002404</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000851">
        <property type="protein sequence ID" value="MES1920765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051272">
        <property type="entry name" value="RIO-type_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45723">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE RIO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="108"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="163"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="21856" checksum="6BA78751EE4329B5" modified="2025-10-08" version="1">MNFFNFFSKKEVKLLDIEEIFNYVLSGDTCGNFTAKFFECKQQSENEDSKLLKRINGKNVFTNKNYDSDNLSTVLSTMKLTSLFDIDESNMFKPETKQLTSHLVAEGEYSSSRLSDGNSELSEYSSAEPQTQSSGNKKHIKSKEEIKANRKENKKAVKEEKRQKRQKKVPKKVKKRKEKLTKMRKNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMC1</accession>
    <name>A0ABV2AMC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002117</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000678">
        <property type="protein sequence ID" value="MES1920452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="8124" checksum="789422E8702EF886" modified="2025-10-08" version="1" fragment="single">KDANSCTVICNRICCCYEKEEENEIYYLKYIFCPVCTELDPEDDKLLVRNLLSNYLCCCCYDSFYLYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AML4</accession>
    <name>A0ABV2AML4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002286</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000779">
        <property type="protein sequence ID" value="MES1920633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010405">
        <property type="entry name" value="COBRA1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13503:SF3">
        <property type="entry name" value="NEGATIVE ELONGATION FACTOR B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13503">
        <property type="entry name" value="NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06209">
        <property type="entry name" value="COBRA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="31958" checksum="7FD1859AF89F3F48" modified="2025-10-08" version="1" fragment="single">MANFRDIIFAVIENLDKLPEKFAKKLVKCQNVILPLTVKKKIWEIDEKSFDREINRILKIYCDSANSNYKKIYHKKFVFPKSRRKVNTNLQILVETIKNSQILSSKLIYNLEQIYFKNFDRLVMTLRFDAIMGLNDNGQQNLQKIDYCYNFIRCIDDCITENRADSSHLDNLKNVVLSVPEDKNLVAKMAAVASNPLLRSFLCKAILHRINVVVSKQQLPKKDLALIFFSQLLLFSLENKNIIKEEISVYPKVIFYQISLFLTDLIKFSKTNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMQ8</accession>
    <name>A0ABV2AMQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phosphatidylserine decarboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002558</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000977">
        <property type="protein sequence ID" value="MES1920957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003817">
        <property type="entry name" value="PS_Dcarbxylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02666">
        <property type="entry name" value="PS_Dcarbxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="59" mass="6774" checksum="6DE83A846398905A" modified="2025-10-08" version="1">MKFKKGQVHGEFRFGGSTILLLFEKGRVELDDDLLKKTMVDDPMEVYLRMGTRIGEAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS3</accession>
    <name>A0ABV2AMS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002548</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000973">
        <property type="protein sequence ID" value="MES1920943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15256" checksum="AA90383FC34C2565" modified="2025-10-08" version="1" fragment="single">THSVKYGTIPSSEQFSTFQNPSLNRPFYPDLNQINKDYQQTSQQNYKNQIGAPLCYPGNGVQCQQRPNNNANYLGNFQNQNTPSQYQLLSENNRYNNYQSTHQDQWGNQIKHSNDANNGYFQYNGKDDYQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS8</accession>
    <name>A0ABV2AMS8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">tRNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002398</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>tRNA(Met) + L-methionine + ATP = L-methionyl-tRNA(Met) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:13481"/>
            <dbReference type="Rhea" id="RHEA-COMP:9667"/>
            <dbReference type="Rhea" id="RHEA-COMP:9698"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78530"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.10"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000848">
        <property type="protein sequence ID" value="MES1920759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.730.10">
        <property type="entry name" value="Isoleucyl-tRNA Synthetase, Domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041872">
        <property type="entry name" value="Anticodon_Met"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023458">
        <property type="entry name" value="Met-tRNA_ligase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002547">
        <property type="entry name" value="tRNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45765">
        <property type="entry name" value="METHIONINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45765:SF1">
        <property type="entry name" value="METHIONINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19303">
        <property type="entry name" value="Anticodon_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01588">
        <property type="entry name" value="tRNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50886">
        <property type="entry name" value="TRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 4" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="TRNA-binding" evidence="5">
        <location>
            <begin position="128"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00047364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="225" mass="25936" checksum="1D22E9D261B55563" modified="2025-10-08" version="1" fragment="single">MESVKLNAGIREAMAISGMANMYFHHEEPWKTIKSEEKDKIDRTELALNICFQLVHLLCGVLAPFIPKICESIEKQANFKKFCLKTEKFEISNKFDCHKINKPEILIQKIQNETIKNLKNKYKGIETISFPLDLVVGKIEEITEHAEDDDLWIIKVNLGNEYSKMTVSDLRKYIKAEEILMKKIIFLNNIKKTKIKGISSHGKIVCVTNNKRTIPLITTKKIGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN10</accession>
    <name>A0ABV2AN10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002653</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001055">
        <property type="protein sequence ID" value="MES1921055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045768374" evidence="2">
        <location>
            <begin position="19"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26184" checksum="A789DE5B81A76B19" modified="2025-10-08" version="1">MISIFCLIFLQLAKLAQENNLDLCQKSFYKLKTKKISGKCPKLTNFANVKGILIKIDENCFSDIKKVNSTCNIECQGDYVTMGKIECVAFNKDAIWDFSSVKCSSVCKTTPFVLNANKNSLKKCTNIPNNRYCEVKCDEKVFIGTFPLCRKGKWVNNKGFCGNRKIFTSEIFLFEFFNCLFVFSCVLTGVVSIVLVAVCKKSDNKHPLLSTRLDFILENESYQHEIFVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE4</accession>
    <name>A0ABV2ANE4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ENTH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002728</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001113">
        <property type="protein sequence ID" value="MES1921153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03571">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013809">
        <property type="entry name" value="ENTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008942">
        <property type="entry name" value="ENTH_VHS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12276:SF45">
        <property type="entry name" value="CLATHRIN INTERACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12276">
        <property type="entry name" value="EPSIN/ENT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01417">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00273">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48464">
        <property type="entry name" value="ENTH/VHS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50942">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ENTH" evidence="2">
        <location>
            <begin position="26"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="158"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="167"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="22697" checksum="705128FB713C145A" modified="2025-10-08" version="1" fragment="single">MDTAADVGKSVLRWASSALTDARYKVEGMYGTEIERKTKEATSNESWGSSGTLKNEIARATFDYGESYDQIMTIIWERLEANSWRVVFKTLTLLDHLIRNGSKRVIDECRIQIYRIRLLNNFFKTDEDGIDRGKTIRALAKRICQMLDDNRVLRRARDKTQQQNRQFSASAPATSFSSSPNANFSDYRSSFFSDYRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH9</accession>
    <name>A0ABV2ANH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein fam50a</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">FAM50A</name>
        <name evidence="3" type="ORF">MHBO_002766</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001146">
        <property type="protein sequence ID" value="MES1921200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007005">
        <property type="entry name" value="XAP5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12722:SF0">
        <property type="entry name" value="PROTEIN FAM50A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12722">
        <property type="entry name" value="XAP-5 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="120"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="84"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="24738" checksum="9A991DDBC2C737ED" modified="2025-10-08" version="1">MAHFKGSEEDFNREREGMNIRMRQQFEFEEIKKKLKEESNRGLVTLNQQFSKADLTSVDNFKSETIGLVSADEFRRKRKKLLQNNQSEKKIDEKKTNFKNKIEEENRLLKNKIKNTLSFDPFQSEDEPTATNSKKLNFKKKKSLKNPNVDTSFLPDKERDKRDAELRSKLKRKWIEKQELIKNEKIEIIYVYWDGSGHRKKITVIFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI1</accession>
    <name>A0ABV2ANI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Kelch domain-containing protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">KLHDC3</name>
        <name evidence="2" type="ORF">MHBO_002785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001167">
        <property type="protein sequence ID" value="MES1921225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.80">
        <property type="entry name" value="Kelch-type beta propeller"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015915">
        <property type="entry name" value="Kelch-typ_b-propeller"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117281">
        <property type="entry name" value="Kelch motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="15896" checksum="F3D4E285FB28E29B" modified="2025-10-08" version="1" fragment="single">MKIRTKQKNYSTPRKRDEKGKVARRVKSIEKGKFEPDEIADKIADQIADKISSRNVTAQHINQFLPKRPSSDVLIKNHLVQNTMTWNAETVSGKPPSARNCHSATVIGKKMFLTGGYGDHSNKETFIELIDLDLRSFFPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI3</accession>
    <name>A0ABV2ANI3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002764</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001144">
        <property type="protein sequence ID" value="MES1921198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058913">
        <property type="entry name" value="Integrase_dom_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24764">
        <property type="entry name" value="rva_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase core" evidence="1">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF24764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13703" checksum="00540D85C1F6A9E8" modified="2025-10-08" version="1">MLELLQNMWNNHKLRTERNRSPLQLFMMGLQTVGNTTILGKEYFENFDEISASSYDIDGEEENDQLDEEEENIVVPPTLHDQQQFQEILNSINTEDVGLWNEEVYISLRNHVKSTLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT1</accession>
    <name>A0ABV2ANT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002651</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001054">
        <property type="protein sequence ID" value="MES1921053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1390">
        <property type="entry name" value="ROC domain from the Parkinson's disease-associated leucine-rich repeat kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="83" mass="9125" checksum="B942B50BAD888CFF" modified="2025-10-08" version="1">MEVLNWGKDGIERFTAYLNFGKEPVYHTSGMIVGCAGAGKTTLINRLQDCSLGEILKVKTTKGIEVHPAIFKVNNKQLQGITM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV4</accession>
    <name>A0ABV2ANV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-directed RNA polymerase III subunit rpc25</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPC25</name>
        <name evidence="5" type="ORF">MHBO_002873</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001252">
        <property type="protein sequence ID" value="MES1921333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.120">
        <property type="entry name" value="RNA polymerase Rpb7-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036898">
        <property type="entry name" value="RNA_pol_Rpb7-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045113">
        <property type="entry name" value="Rpb7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005576">
        <property type="entry name" value="Rpb7-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12709">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II, III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12709:SF1">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03876">
        <property type="entry name" value="SHS2_Rpb7-N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88798">
        <property type="entry name" value="N-terminal, heterodimerisation domain of RBP7 (RpoE)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="RNA polymerase Rpb7-like N-terminal" evidence="4">
        <location>
            <begin position="8"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14302" checksum="947C8640F28A81F8" modified="2025-10-08" version="1">MFKEVVFKDIIFIEPKYFGQNHLETIKDIINIKFLNKVIKDVGLCTSIRSINDIGAPHILKGTGREQVTVIFSLIVFSPFPGEVLVGTVDYADRSGLIISVDFFKNIFVAADQIPVPNNLFLDIKMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP48</accession>
    <name>A0ABV2AP48_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HAT C-terminal dimerisation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001364">
        <property type="protein sequence ID" value="MES1921456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="70" mass="8197" checksum="A4DD10921B0CB2E0" modified="2025-10-08" version="1">MKELFWEMCRFQLSFASSTAVEKRFFSRLSSSCNPSNRKAVNSCESCWLQPLRKVILKTKIGLFFRLTLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK8</accession>
    <name>A0ABV2APK8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003134</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001537">
        <property type="protein sequence ID" value="MES1921604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050236">
        <property type="entry name" value="Ser_Thr_kinase_AGC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24356">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24356:SF1">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE GREATWALL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="1"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="23719" checksum="A758FFEA0A9008D6" modified="2025-10-08" version="1">MQYYPNGSLGKFAKSSFKNEIFYKPIFAQIINGLEALHKKRFAHLDIKPGNILIDSNFRIGLTDFGLSEIVEDVKELQIKGSPMFMAPEILKGRISLEADLWSLGVTMYMCITGSRPFDFKNAFVNKKLDLRAVYSAITSDIKYPPMSEQCEDLMRKLMKTSKEERLGAGKDGFEKLKRHPFFNGIDWNTPFESNPTLTPTTKALLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM2</accession>
    <name>A0ABV2APM2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rho-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003146</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001559">
        <property type="protein sequence ID" value="MES1921619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00159">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45808">
        <property type="entry name" value="RHO GTPASE-ACTIVATING PROTEIN 68F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45808:SF2">
        <property type="entry name" value="RHO GTPASE-ACTIVATING PROTEIN 68F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00324">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="1">
        <location>
            <begin position="42"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="32070" checksum="4FF533DD7B9BC463" modified="2025-10-08" version="1" fragment="single">SENRKSKDFIKIGKLNLAKISQSHLFDEIVSTQIITKNSKSIQIDSNEKSSEDYINSKSIQDFEKLKRIFIQKNCHKTEGIFRKSPNLQKLERILRDIKKGNISIQNFDSPHLVASSIKIWLNSIAFKDRKKQFRQFIRRQLPKNFKLFGNLDSEFIDVDHFYVNFEKIISSIGFERKHVLVSLLELLNAVKCNKKLNKMDSKSLGILFAPVFFSFEDLAGKKNKIPTAIKITENFIENYPFFPKMGHLEKKDQIFSNIQKNKVSKLKMKFEKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ7</accession>
    <name>A0ABV2APQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003177</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001584">
        <property type="protein sequence ID" value="MES1921648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045885994" evidence="1">
        <location>
            <begin position="21"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="28157" checksum="AFA3075BAEB7E4B4" modified="2025-10-08" version="1">MYTKMVLNAVALLFFSQITADPLPTCSGSLFPSHVRITGDDLTPLDSRVVEHGEELILQCAAPNKSLVVQGSSYRYPYLNIACHGGQFLIMFINKPFKPITTFDCVDDRPQDGCAVNLLEHDFELREKLGVRKYYIQKSIEIMCKMDSRRRPFYVDAICDGPNWIVLLQKDGQTFNDFCLSVSSSCRLSQLPNILSYDGEENEQILGGDEIEVNCKVGTQKAIVKCDRMEFKMNSIVLTERMAANICSAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ94</accession>
    <name>A0ABV2AQ94_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003153</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001565">
        <property type="protein sequence ID" value="MES1921626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052462">
        <property type="entry name" value="SLIRP/GR-RBP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48027">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="49"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="187"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="9"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="34"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="202"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26285" checksum="1E94427BE29493A5" modified="2025-10-08" version="1" fragment="single">MSTSPQFTEKTKTDDNPNEEENKKTTETTPTKPVENQQNNQTDENIEDRKLFIGGVSRDTTLEEFRHFFMTISKGKVIEPIMPVNQLTGNTRGFGFVGFQDKSDYDNIVQLSRSNQLIIKGKNVEAKPASEKPKRKNLQRSHFPNYASRPPYNYWSGFGRFGANPNMYGGEMEQNMNPYQYGAPPYMPARNVGQNGGFEKGPNQYPQQQSQYNPAAGQYADYRQNNNRNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE7</accession>
    <name>A0ABV2AQE7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003109</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001500">
        <property type="protein sequence ID" value="MES1921577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="356" mass="40985" checksum="6CA0A9A29DCD3ED2" modified="2025-10-08" version="1">MIDLRVSLKTKDNDTIKPLETVQNNLGTIKFVFNVEKIGIWELETISKTSKILKHPFLSDKVYAFSSETSGDKSVFSHYGHKLNLKPIKLSTSSSFDNITLNLTLRDEFGNRINEDRCMKLKMEPNNFINFKTKSIKSGNHSLTCGIFLSGTVSKKHKIQLYSTDKEGNILRFPPFFVYINAGDLHPGKISMDLEEHKMAYVDIAIDPRDCHGNKYKKLMSKKISIEETCDATNFTKKNPILNFREIGGYKVRHFLQFSGVSCRVRLINLIIADKENGEDIVSKRLQLKKENFGKGYFFRTFIEASLKEELLIIRKPIVLEIKIDEETLVEYFIFKKNELSHRKSIAESLGVDWSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG9</accession>
    <name>A0ABV2AQG9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein S3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003449</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001941">
        <property type="protein sequence ID" value="MES1921921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="67" mass="8293" checksum="D0058AB2EE6B85BE" modified="2025-10-08" version="1">MVEEAINFWESQKIIKRTIKKVIFSTPKKKQKIEKRLEKKFESLAKNIIEERDFFRLINVKEEQYFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL0</accession>
    <name>A0ABV2AQL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003488</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001997">
        <property type="protein sequence ID" value="MES1921963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10159" checksum="3043A6CF43D6C2AC" modified="2025-10-08" version="1">MAAVPTLLATMYATLAPYPCFSKPHDYPMVSYPQTPGVLAPPVSVVQVAPYPPFLSVSIQTSIYSPLLNVQGLIKVMIKMLIVQDSCNVQEYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR38</accession>
    <name>A0ABV2AR38_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chromosome transmission fidelity protein 8</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">CHTF8</name>
        <name evidence="1" type="ORF">MHBO_003658</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002273">
        <property type="protein sequence ID" value="MES1922143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11995" checksum="0FDAE85A65D0F5E3" modified="2025-10-08" version="1">MRIFELKMGDVQKSEFCLFDFQGEFRIPNMDIDKLHLGKCNYIENGKIELRTNSLKINGQIERLKKPFLVLKRDSDKNLKIEAVLTEKYVFKKRPVFVLDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR58</accession>
    <name>A0ABV2AR58_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003671</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002300">
        <property type="protein sequence ID" value="MES1922155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="47"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="65"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="28200" checksum="DA8AD3CADF267C5C" modified="2025-10-08" version="1">MFIMFENDDAEIFNRNNDMVYDRTVDGWMSEELMKANAREQQWKTLANASAKKSKNSKKSKKSNNWKSSNNAKTANNPKPSNETSAYKPHSWICTGKHDEQIVERQEATIAFKPHLWMITANNAQTTKPKKNDAESQTDRDVQEMLESGYTDAHYQLNFDTDDEEEEEEDWEAESQVVDLDAGVTIRQRRDSMGEDWVTESDRTIEEFRLDMRTLDMRLRMRGIEPRYPQHPRSVKPLRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA5</accession>
    <name>A0ABV2ARA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001965">
        <property type="protein sequence ID" value="MES1921938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15246" checksum="0C64E33EE7A1842B" modified="2025-10-08" version="1">MGSELLLQRVPELGLVLSIPLRALRFRPRARQKLGQQLFDRKAVGPVRATVGRDAAGVEPLSAEETGGSDDGSEQRCGRLLSDECRFRLKRKTLFVASGRASALRGRDEIAPDDCADFADADGKGALFEQNGRDFRFRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF0</accession>
    <name>A0ABV2ARF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003742</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002440">
        <property type="protein sequence ID" value="MES1922234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14720" checksum="644FB92676A8FFE9" modified="2025-10-08" version="1">MYISLKGYGAFYISLLEKSDSITTTTGDSHLVKDIDEEAKMEHLHGFVDIGLKLKHLSKTPYKSKRDREQIIADIKGIAYTLKKVSMTNMMTLEFSIINFPYFSSNSPLSLAYDVYMSTDSMCISMFYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL4</accession>
    <name>A0ABV2ARL4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">26S proteasome regulatory subunit RPN2 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003797</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002526">
        <property type="protein sequence ID" value="MES1922287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040623">
        <property type="entry name" value="RPN2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943:SF2">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18004">
        <property type="entry name" value="RPN2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="26S proteasome regulatory subunit RPN2 C-terminal" evidence="3">
        <location>
            <begin position="112"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="196"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="211"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="223"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="247"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="330" mass="36443" checksum="103C599877184447" modified="2025-10-08" version="1">MAKSLVFAQTTSSQKSRVEEHIQEISKYIKNTSSGDFPSFSKSGAILSMGLLTLGGNNCTVSMLSDNGHKSLFGGDNGNIIRPVAVAGVLLFMQSWHWYPFNHFLSLAVKPTAFIGITSALKMPKHFRLFCRNAQNYEFPEFKLEEEKKKTEASEVTLSISEKSKLERYRRRSKNKKSGLLQKSSAIASTKKLGDDTVASSKAVPSPGAVSSTGEETTASSSNAKPSTDAVSSTREEAMKKNGIASADKKDEKEKSKEEETALKVEKALKNCVLKNPCRITIKQRKEVGEFVQQRYRTIKKGFGVILLKDNCPKDPEDLATNKYIHGKNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL8</accession>
    <name>A0ABV2ARL8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003638</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002250">
        <property type="protein sequence ID" value="MES1922124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022374">
        <property type="entry name" value="EttA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43858:SF1">
        <property type="entry name" value="ABC TRANSPORTER-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43858">
        <property type="entry name" value="ENERGY-DEPENDENT TRANSLATIONAL THROTTLE PROTEIN ETTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="9"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11711" checksum="F412ABACCDBF8FB5" modified="2025-10-08" version="1" fragment="single">FNFRGRDQSKLVGDLSGGEKNRVGLAKVLLNNCNVLLLDEPSNDLDIITLTALESSLKSFGGCVVCISHDRYFLNKICTHIIEVRSDGRVRLFNGNYDFYKKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP4</accession>
    <name>A0ABV2ARP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003847</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002613">
        <property type="protein sequence ID" value="MES1922340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17784" checksum="D8D2E35AF175E1CE" modified="2025-10-08" version="1" fragment="single">MLSKKSAGPIKTAFSTSNIFGDPIYNEPDEMAIKKMKQFFLPCDVDDLVYSDFENSESDFPPKKTTSKKIFRAGKKSLRHFKGRITRREMEEQWRKGNKNYLLCAGCRRFVRRTSKRYHVHICAGSNNGTLAFLNPEGQISQIYTFKESNRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR4</accession>
    <name>A0ABV2ARR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002674">
        <property type="protein sequence ID" value="MES1922368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17691" checksum="BBC9C1574E8112C5" modified="2025-10-08" version="1" fragment="single">IYWFGYIIKSWKNCGMLVTKKFGDACTSFGIGLLNNIENTNKKDCDSFLMSSVGTMNSIEILRHFIDKNSRQCEKLNNLLRYHEEDSEIKEICEILNSLLKTGEQDKIAIFKNSIWANLELINQKSLKKFGTNQISIMRNFDDFSAISKWSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV0</accession>
    <name>A0ABV2ARV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">proton-translocating NAD(P)(+) transhydrogenase</fullName>
            <ecNumber evidence="2">7.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_003697</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>NAD(+) + NADPH + H(+)(in) = NADH + NADP(+) + H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010002352">
        <property type="protein sequence ID" value="MES1922181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007698">
        <property type="entry name" value="AlaDH/PNT_NAD(H)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024605">
        <property type="entry name" value="NADP_transhyd_a_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160">
        <property type="entry name" value="NAD(P) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160:SF19">
        <property type="entry name" value="PROTON-TRANSLOCATING NAD(P)(+) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01262">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12769">
        <property type="entry name" value="PNTB_4TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01002">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-1278">Translocase</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="214"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="266"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="293"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="domain" description="Alanine dehydrogenase/pyridine nucleotide transhydrogenase NAD(H)-binding" evidence="13">
        <location>
            <begin position="1"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1922181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="315" mass="32233" checksum="44F60BCD8A3C4C7D" modified="2025-10-08" version="1" fragment="single">MGAIVRGFDTRAAAREQIESLGGKFLTVNIEESGEGAGGYGKSMSAAFLAAEHDLFRKQAKEVDVIISTALIPGKAAPKLILEDMVASMKPGSVIVDLAAEAGGNCELTQPGKTIRKHGVTIIGKTDFPSKMAGQSSTFYSNNIAGLFLHMTSGDAFAPDMADTITRGAAVLENGVLCWPAPPPKMPPPPKPAAKPKSLSAEKPDLFLATRSKALFSAGAMGALLLGGFAGSSLGGTLSTFALACYLGNQVVWGVTPALHTPLMSVTNAISGITAVGGLVLVGGGYLPGTLPQVFASAAVLLSAINIFGGFRVTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY9</accession>
    <name>A0ABV2ARY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003958</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002822">
        <property type="protein sequence ID" value="MES1922443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03221">
        <property type="entry name" value="ABCF_EF-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050611">
        <property type="entry name" value="ABCF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211:SF14">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211">
        <property type="entry name" value="ATP-BINDING TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="56"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="ABC-transporter extension" evidence="5">
        <location>
            <begin position="164"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="198" mass="22850" checksum="3B7A2CF851BE79A1" modified="2025-10-08" version="1" fragment="single">MPSSDKTVLETVLLSDKERTDLLSEEKSLIDLQKRISGGISESPKTEMSLKDINERLRLIYDRLEYIDAASATTRAATILSGLEFSAETQNEPTNNLSGGWRMRVSLACALFAEPDLLLLDEPTNHLDFPAVEWLKNYLNEYKKTLVIVSHVRKFLNDVCTDIIHIEDRKLKYYKGDYDTFERVRKEQRKQAKTAYDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS88</accession>
    <name>A0ABV2AS88_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">proteasome endopeptidase complex</fullName>
            <ecNumber evidence="3">3.4.25.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_004055</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Cleavage of peptide bonds with very broad specificity.</text>
            <dbReference type="EC" id="3.4.25.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010003058">
        <property type="protein sequence ID" value="MES1922540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000243">
        <property type="entry name" value="Pept_T1A_subB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF3">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00141">
        <property type="entry name" value="PROTEASOME"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-0647">Proteasome</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0888">Threonine protease</keyword>
    <keyword evidence="9" id="KW-0865">Zymogen</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10968" checksum="BC1E46DDE31D8B8C" modified="2025-10-08" version="1" fragment="single">GPKLYFVDDEGSRLENDIFSCGSGSTHAYGVVDTGRKEDMNEDEAIELAKRSIYHATHRDPYSGGVVRVFVISKNGHRTGYSADMNDLHELYDNKVNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS94</accession>
    <name>A0ABV2AS94_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">SB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004045</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endosome</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003028">
        <property type="protein sequence ID" value="MES1922532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037202">
        <property type="entry name" value="ESCRT_assembly_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017916">
        <property type="entry name" value="SB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09454">
        <property type="entry name" value="Vps23_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140111">
        <property type="entry name" value="Endosomal sorting complex assembly domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51312">
        <property type="entry name" value="SB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0967">Endosome</keyword>
    <keyword evidence="4 5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="SB" evidence="6">
        <location>
            <begin position="42"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12622" checksum="0F201B2EA877B2CC" modified="2025-10-08" version="1">MRFRQAKIAEKISRLELSVGTAKDFDGRLKNIEAHDFAENSDFLSKKLLRYISIDRSITDTLSVLRKIVDQGDFDVAVYMKNIGKIFKTQFKVRHAIISIIKMKSEQNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC7</accession>
    <name>A0ABV2ASC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004091</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003123">
        <property type="protein sequence ID" value="MES1922576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="63"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10442" checksum="18FC7E68259C345F" modified="2025-10-08" version="1">MELKVEIAKQHQCSKNSVDIIDECSYVPHLNQMSVECLSFPIAVVLHEENRSATDLPSAMHSVITTDPDITNPNEEDTRIKMSCGHAISTVYSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL6</accession>
    <name>A0ABV2ASL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Protein disulfide-isomerase</fullName>
            <ecNumber evidence="1">5.3.4.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">PDI1</name>
        <name evidence="1" type="ORF">MHBO_004184</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.4.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003369">
        <property type="protein sequence ID" value="MES1922666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003756">
        <property type="term" value="F:protein disulfide isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9562" checksum="73478E7BAA8B880F" modified="2025-10-08" version="1" fragment="single">KEEKYKFRGELNEKDINKFVGDFKNKKLEQFYRSSEAPKKNEGPIFEVVGSTFKDIALDEEHDVVLMYYLTVFSIQSSLQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP1</accession>
    <name>A0ABV2ASP1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Clp1 P-loop domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004208</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003420">
        <property type="protein sequence ID" value="MES1922686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045116">
        <property type="entry name" value="Clp1/Grc3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032319">
        <property type="entry name" value="CLP1_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12755">
        <property type="entry name" value="CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12755:SF6">
        <property type="entry name" value="POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16575">
        <property type="entry name" value="CLP1_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Clp1 P-loop" evidence="3">
        <location>
            <begin position="5"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25000" checksum="05543002F67141DD" modified="2025-10-08" version="1" fragment="single">LIVAGEPNSGKTSISKTLLNYLTRLKFRPILVDLAVDFNILGPPGSIGIKLIENIILPDEEIDSNSLIFSVGKDFLGNQKFQDYKKIIESIISTLKNLLSKSEKSKNKFFILTKLSSISGAADLSIFEEVYSSISSVSQNFLVIGLGLLSSRLSQKLPNSKIFKIQKSDAIFPLNSSSDKRRKNNFLAKGYLNGWQQKLLPSKKILRFGTFTVYKITENYLQPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU7</accession>
    <name>A0ABV2ASU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Serine/threonine protein kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003978</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002882">
        <property type="protein sequence ID" value="MES1922463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000961">
        <property type="entry name" value="AGC-kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017892">
        <property type="entry name" value="Pkinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00433">
        <property type="entry name" value="Pkinase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00133">
        <property type="entry name" value="S_TK_X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51285">
        <property type="entry name" value="AGC_KINASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="AGC-kinase C-terminal" evidence="8">
        <location>
            <begin position="160"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="221" mass="25610" checksum="5B02F896C8162FBE" modified="2025-10-08" version="1" fragment="single">KEFIIAQTLLALGHLHKNGVFYRDLKPENILLDEHGYICLTDFGLSKIFDQIEDNEASTFCGTPEYLAPEIIERQNYTKSVDWWSLGILVYETMVGYPPFYNKDTNEMYKMIQSAEVKYPKFLSKVAKDLISRLVEKDPKNRLGSGPSDAEEIMSHEFFKDVNWEMMLKKKLRPPYVPATRKQTTDTSNFDAEFTMEPVADSFVSDMSLKNNHLDNFSYQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT99</accession>
    <name>A0ABV2AT99_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003221">
        <property type="protein sequence ID" value="MES1922612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="29879" checksum="FAF5B4960B999C0C" modified="2025-10-08" version="1">MVIEGYGRFKQSLVSHQVIGAYKAPTASTFKINGAAVGFVAPTVNTALVVDIELLDLRNPAGSGRNVIKHGSHVLVEVTLTAAATTQGLVWAEVQKALVERKKIWPNLDDEVIATLSGAADVDITFTTASSTTGVKSVKLLASTEGNRPSGLFTKTSLTEFSPVAYCVYTPGDEGENSGKWLEENVMMADPANIDYYGMRPGETPVLNGAYTSFYFRCKPWADGFQDMEHVSPIWNHTGYQKSFEFNVWVQQTGTIATSPSVKHDTIKAIEFFLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF9</accession>
    <name>A0ABV2ATF9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004192</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003384">
        <property type="protein sequence ID" value="MES1922672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.900.10">
        <property type="entry name" value="Dbl homology (DH) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035899">
        <property type="entry name" value="DBL_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000219">
        <property type="entry name" value="DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051092">
        <property type="entry name" value="FYVE_RhoGEF_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673">
        <property type="entry name" value="FACIOGENITAL DYSPLASIA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673:SF159">
        <property type="entry name" value="LD03170P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00621">
        <property type="entry name" value="RhoGEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48065">
        <property type="entry name" value="DBL homology domain (DH-domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50010">
        <property type="entry name" value="DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DH" evidence="1">
        <location>
            <begin position="6"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11824" checksum="E78A50CBEB786B5C" modified="2025-10-08" version="1" fragment="single">EERKSKQVKVAREIVDTEVKYVEKLGFLHYIFYLRAKAMIEIGKEVMSEKEINEIFMNISDIYALNKNMCNALVELRYKGEDEMIKGISRILLQFTPFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH8</accession>
    <name>A0ABV2ATH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004259</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003545">
        <property type="protein sequence ID" value="MES1922736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23236">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23236:SF92">
        <property type="entry name" value="POLYADENYLATE-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="88"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="167"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="174"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24357" checksum="43A453861B4C9A71" modified="2025-10-08" version="1">MKQIAQAGDDAQGTTLSKLDLESAKVFESMDKRDKDMGTLLDKYKKLYQKKRQMLVIQKSIAKQFSLSMRTAQHINESLLEDPTRDKNSVHVTNLPGTVTVESLRTHFEGCGKVVRATIPLNRAGRSKGYAFVEFEAEEAVEEALKMSGGEIEERVVLIHRKRKNIPGMGSKSWRSHRRAGRRGRPRGRRRFSRGRNRFRGRTGRNSLLRGRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK5</accession>
    <name>A0ABV2ATK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004514</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004241">
        <property type="protein sequence ID" value="MES1922982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6616" checksum="707BBE8E35406194" modified="2025-10-08" version="1" fragment="single">PSSHPDPHGNREAHKTPFYERVKEIKLLRMRSSKNEQKAMNIDENIKTKLVNLDSSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK8</accession>
    <name>A0ABV2ATK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004534</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004299">
        <property type="protein sequence ID" value="MES1923001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16543" checksum="A11B2CD83A119C4E" modified="2025-10-08" version="1">MAVSENESSGNDLETAPFLKLDIPKHVRSEFLTTFANKLEFQCVQPLEPSTLLKLESCPKLRGEILSMNPLMVKFSGVDLTEEAMAQKPNYVNDITFKFAGRGKHGQYIEDYTKIRRETYKSSSLSPQRTRYQSCRIFVRDQQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN5</accession>
    <name>A0ABV2ATN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004404">
        <property type="protein sequence ID" value="MES1923026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="11960" checksum="704B1E7A6D722144" modified="2025-10-08" version="1" fragment="single">MTETEEDELEFSEIPLEFESEEKSDNSSWTESEIDLSDNENSEQETDKESQSGMPRKATAETGSKIDGETSEVPDSTSEAEETENDYPFEETEPFNLKKLPQHACA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN7</accession>
    <name>A0ABV2ATN7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004414">
        <property type="protein sequence ID" value="MES1923031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24240" checksum="E5FFDCF70B8F966A" modified="2025-10-08" version="1">MTPEEEINTGTSSKKATETVSMDPEKFLSGSSMYILTGCIGLFVLFFCIYVIVSVYKKIIHVRTSRSHIVQQLQKDDLNYTALHTRLEIQPHVAHFNQHRNSVSYFSPVFDDDINYEEIDIYNSADESSILESYQLPSEFNNDLNPHTHLSHADDSYLTPVADAYLTPVDDAYSTPVKDVYLTPVEDVYLTPVKDAHVSLVEDARHVYIDVIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV4</accession>
    <name>A0ABV2ATV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004644</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004688">
        <property type="protein sequence ID" value="MES1923103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12831" checksum="5F4B683E414B1183" modified="2025-10-08" version="1" fragment="single">RTDITTNTEYDHDLAVAMGTAKTHKSVKIKKQKAPVQQENIFERYIKKLEKAGYKVTAPKINDEKSDINKKTLAEQIPPKINSHKGESSLFCKNYNQTKKSKVYDRKDLYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX1</accession>
    <name>A0ABV2ATX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Mitosis inhibitor protein kinase wee1</fullName>
            <ecNumber evidence="8">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">WEE1</name>
        <name evidence="8" type="ORF">MHBO_004659</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. GCN2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010004744">
        <property type="protein sequence ID" value="MES1923118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050339">
        <property type="entry name" value="CC_SR_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11042">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0652">Protein synthesis inhibitor</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00037982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="24570" checksum="622517955D6453F8" modified="2025-10-08" version="1" fragment="single">LAAWMENSDMYHLTPLLNSTLNDWPRCDNLKLGAIPASKLETGIWRVLQDLSSALEHIRSKGFVHVDVKPSNVLVRRGATLVWDRFLLNDFGQARPLDGTKAVKARGLGEWRYRPPEILERTASLRHDGEAVDKIESNYDIYSLGLVVLDILVGTILPLKALEKIREGNIDDFLGETKWSSKLKRLVAEMMSFEALKRPTSAEIVKKCENGILGKFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU03</accession>
    <name>A0ABV2AU03_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Splicing factor 3B subunit 3</fullName>
            <ecNumber evidence="2">1.17.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SF3B3_1</name>
        <name evidence="2" type="ORF">MHBO_004381</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.1.9" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003891">
        <property type="protein sequence ID" value="MES1922852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008863">
        <property type="term" value="F:formate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050358">
        <property type="entry name" value="RSE1/DDB1/CFT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004871">
        <property type="entry name" value="RSE1/DDB1/CPSF1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10644">
        <property type="entry name" value="DNA REPAIR/RNA PROCESSING CPSF FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03178">
        <property type="entry name" value="CPSF_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 C-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19356" checksum="72C5D7E47973311B" modified="2025-10-08" version="1">MFEGDKFGNFIIHRLRGEEEDKLKTSLNIPYGGYLNSAGIKLIDSAHYYVGETITSLEKCVLNPGGAEVIIYSTIFGGIGVFYPLKNREDVDFFVHLETHMRQNAPPIAGRRHIDFRSSYFPVKNCVDGDLCEQFGSMSRDVQKHITSEMVMKDPNTIKKRIEILRSHII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU21</accession>
    <name>A0ABV2AU21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004721</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004998">
        <property type="protein sequence ID" value="MES1923178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6730" checksum="6C865FD132BFFEA0" modified="2025-10-08" version="1">MRSRAKITKLERKAQSFFSQTIELNTFQEEVKGYYQCVAVSVAGEGASKEIQVNTTEGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA1</accession>
    <name>A0ABV2AUA1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Histone deacetylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004774</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005209">
        <property type="protein sequence ID" value="MES1923232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="entry name" value="Histone deacetylase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003084">
        <property type="entry name" value="HDAC_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625:SF10">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01271">
        <property type="entry name" value="HISDACETLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="Arginase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="102" mass="12113" checksum="4D5886A38AB8A88E" modified="2025-10-08" version="1">MPEISKRRVGYYYDDTIGNYYYGPGHPMKPNRVRLANVLVEKYDLYDKMNVIKPFALPGDEMVRFHDPDYIDFLENVTSFNQKEYEKATFEFLGKVLFIKVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC8</accession>
    <name>A0ABV2AUC8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Calponin-homology (CH) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004809</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005363">
        <property type="protein sequence ID" value="MES1923265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.10">
        <property type="entry name" value="Calponin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001589">
        <property type="entry name" value="Actinin_actin-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001715">
        <property type="entry name" value="CH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036872">
        <property type="entry name" value="CH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044801">
        <property type="entry name" value="Filamin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38537:SF16">
        <property type="entry name" value="CALPONIN-HOMOLOGY (CH) DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38537">
        <property type="entry name" value="JITTERBUG, ISOFORM N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00307">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00033">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47576">
        <property type="entry name" value="Calponin-homology domain, CH-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00019">
        <property type="entry name" value="ACTININ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50021">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Calponin-homology (CH)" evidence="3">
        <location>
            <begin position="13"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="16220" checksum="5DFEE61D63A48244" modified="2025-10-08" version="1" fragment="single">MPELKSVSRKWIDVQERTFRNWCNSKLKNHPKNIKIEEKLDKVFHDGLNLIYLIETLDETSFPYDYFKTPRFQLHCHENLSLSLKHLKRSKIKLVNIDYSDIYDGNLKLILGLLWQMIKTFDLLKNSDPMQGYSTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG6</accession>
    <name>A0ABV2AUG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004869</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005593">
        <property type="protein sequence ID" value="MES1923313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7722" checksum="95A6B5FB852BC837" modified="2025-10-08" version="1" fragment="single">KVEVMLVIVSFCMHINREQPSNLLSEEITLDFVKKHTTIIYDSEYGCYGCGRNELAYYKIKNFLNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH7</accession>
    <name>A0ABV2AUH7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Citrate synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004619</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004576">
        <property type="protein sequence ID" value="MES1923081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="entry name" value="Citrate Synthase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739">
        <property type="entry name" value="CITRATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739:SF8">
        <property type="entry name" value="CITRATE SYNTHASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="Citrate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="172" mass="19954" checksum="40D873F9B9FD8005" modified="2025-10-08" version="1" fragment="single">MFSNKKIMASSFLKYHPRLISIRNGETLLLRKMRKIVPKQREYFKKWKTENGHKILNKNLVVSQSLGMKGIIGMISETSMLEPNEGIRYRGLNIKKVCEVLPKISEYPESAKNVLQPLPEGVIWLFLTGKLPTEKEVRSISEDLMKRSQLPELTKRLIDSYPKEMHPMVQLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS7</accession>
    <name>A0ABV2AUS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004982</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006092">
        <property type="protein sequence ID" value="MES1923415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14719" checksum="B0E4A026297B0199" modified="2025-10-08" version="1" fragment="single">PDDYKQQCEELRLKIEQLSRESREREFGLKNETQNVQHQKRMEIEGLKSTIERIRLDNKQYKDVEGQLNGANRKILDLDGQKSNITNERDRLKSELKEVRGRLKDLEKQTDKLKLQQPTNGGGGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY9</accession>
    <name>A0ABV2AUY9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004755</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005118">
        <property type="protein sequence ID" value="MES1923212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021229">
        <property type="entry name" value="DUF2800"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10926">
        <property type="entry name" value="DUF2800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="21911" checksum="90E47DC4257ADA22" modified="2025-10-08" version="1" fragment="single">PAGEAALKPGGHFAAGSWCKWCKHKRNCNVFSTWKNGEAETGFGPLEILKPEKPAVIEFPPLSELTDAQIGKYLYAIELLQPVKKLLIEEAVSRAQLSEEPVVIPNHAFTKTSPHRKWKKGAEETLEMVLGEDTIYDRKLKSPAKLETRIGKKNKHIVADLSEKPEGKLTLAPAKTTRYIVDPKATAAEGFSVVVAKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC4</accession>
    <name>A0ABV2AVC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004891</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005669">
        <property type="protein sequence ID" value="MES1923333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006461">
        <property type="entry name" value="PLAC_motif_containing"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01571">
        <property type="entry name" value="A_thal_Cys_rich"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15907">
        <property type="entry name" value="DUF614 FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04749">
        <property type="entry name" value="PLAC8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="13432" checksum="E81EA652D72E28D5" modified="2025-10-08" version="1">MLGTGISNNLNQKQNQFLAGGGNNWKFGLYSCCGDILSCCCACYIPCFVQGKTYALLNESDSSTKYTCAFFLADVLGCGLCATCYLRGKVRESRDIDGNGCGDFCSSLFCGPCVMVQAYRELKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVZ2</accession>
    <name>A0ABV2AVZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006976">
        <property type="protein sequence ID" value="MES1923579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10644" checksum="8290B0B22D20BC85" modified="2025-10-08" version="1">MLERDAYIWLTAHLSHKGVAISPQVTYHLGACKYIADFVLKRDNVELIIDMKSKATVTPLFKIKKSLMKVHIDKVVNVVYSVQELAKLTAAVFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEE8</accession>
    <name>A0ABV2AEE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000114</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Folate-biopterin transporter (TC 2.A.71) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039309">
        <property type="entry name" value="BT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31585">
        <property type="entry name" value="FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31585:SF51">
        <property type="entry name" value="TRANSPORTER, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03092">
        <property type="entry name" value="BT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="161"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="337" mass="38555" checksum="D101B64B2DFAD268" modified="2025-10-08" version="1">MQKLVRFLNSPWRFFRDVKKVYGGKYLVYQFCAYCLVIGFLFKSTRFNVYPYMKKHGSTSNEIQFYSMIMKVPFNLQPAIGLLADIYPLFGYYKRFYVLIASLLGTLALLVLSFVNLGKTMLVFPFLMLFNFAHIATVLLLSNTKYIQIANSVPNFKRHMVSLAMGLRFTGSLAGNYVGYFVTKHDPINVFRIGSVFSFSIILPVLLGFIPEEKVSNPKIEREKLSKVLFSPAEKSNVFARDDNGRLDDRADSDLLVREHSGSGSVQRRGRHCALRGDLQADRPRHGEDLRVRLHPKRDSRGLFLRQERLAAGKRPVLLRGAQLFDKLSVHDEPVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEM5</accession>
    <name>A0ABV2AEM5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">P-type ATPase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000164</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006544">
        <property type="entry name" value="P-type_TPase_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45630">
        <property type="entry name" value="CATION-TRANSPORTING ATPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45630:SF7">
        <property type="entry name" value="ENDOPLASMIC RETICULUM TRANSMEMBRANE HELIX TRANSLOCASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00002">
        <property type="entry name" value="C1.7:_P-type_atpase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01229">
        <property type="entry name" value="COF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-1278">Translocase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="519" mass="57848" checksum="BC0CD8F7236204C8" modified="2025-10-08" version="1">MVVPTELPMVLSLSVNNALLSLSKKKVFCSEGHRLPAAGSLRYCCFDKTGTLTNDQYELAGVASLPHKKEEETLKQLALSSRKTQLVVAGCHSLSVLEDDRLSGDSLEIAAFESLDAQMSRSGLIHLKNVFNCEATLRIVRRFPFTSEEKKMSCVVELKTRRSSETFYVVKGASERVKELLETVPRDYDSTCANLSKLGYRVIATALKRMKPSKNLRLSSRNLDSDCEFSGFLAFSSQMRDQTFDTIFSLRRSAHKTVMITGDSAFTANHVARRCGICDKGIATLTKNAGSLNWTYLNDDSQIADLNLSAIKRKDLEYDLSITGEAFALLQSELEKTELDALVKHFSVFARMSPSQKEGVLKSLKRSDEFVLMCGDGTNDASALKQAHIGVALCESGSNRLNSEVAKPSPAKQSALFDDSDDYLVDMNVASVASPFTIRFGKLEGVLDIIKEGRRTLAVNTQMYQILALNCLVYTALFRFCFHQKLPISSRNQNERQTSHRGRIGRNFFVPFRFFSKML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEZ8</accession>
    <name>A0ABV2AEZ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000264</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001660">
        <property type="entry name" value="SAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00536">
        <property type="entry name" value="SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00454">
        <property type="entry name" value="SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47769">
        <property type="entry name" value="SAM/Pointed domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50105">
        <property type="entry name" value="SAM_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAM" evidence="2">
        <location>
            <begin position="9"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="76"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="117"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="127"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="24625" checksum="0DFFBD78873D952A" modified="2025-10-08" version="1">MSSKSPEKWDVEEVKKWMMSLSFAEEYSAIFSENDIDGALLRELDEEILREELNIKNKLHRKKLLIEIEKLFNRDGSDAMSASEEEPEKKNKEKRKGLPYLAKVKRKMPKKQSSSESEFKESEPEKKSKKSSKKKSKKATPTTKEKRVLRKGEKLCPECDTSLKKDIVMCGKCDYVFPESTATRFKATNYFKSFAKNPNYNDRKKLFSKEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF31</accession>
    <name>A0ABV2AF31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Mitochondrial distribution and morphology protein 35</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000283</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRIAP1/MDM35 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007918">
        <property type="entry name" value="MDM35_apoptosis"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46403">
        <property type="entry name" value="TP53-REGULATED INHIBITOR OF APOPTOSIS 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46403:SF1">
        <property type="entry name" value="TP53-REGULATED INHIBITOR OF APOPTOSIS 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05254">
        <property type="entry name" value="UPF0203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="73" mass="8544" checksum="2BD31FA364C1B66B" modified="2025-10-08" version="1">MAEGKDQCSVCPKLKEVYENCYRKWLSDSFLKGKATQIGCEEEYSRYQKCIKDFMLTDKSLKEELAKSEKGEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF58</accession>
    <name>A0ABV2AF58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000297</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000040">
        <property type="protein sequence ID" value="MES1918310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16449">
        <property type="entry name" value="RING-HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018957">
        <property type="entry name" value="Znf_C3HC4_RING-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00097">
        <property type="entry name" value="zf-C3HC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="21"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="277" mass="32099" checksum="76B2E9A0CF21E349" modified="2025-10-08" version="1">MKKLNLRLDEMDNNSNIVDPCPICLDQYKTPSRGIKNGQAECALKPCFHSLCFRCLLNTFVHSSQQCPICKGTIVAIYIFFDPACVLPVEGLRSLISPFRHGIFRGQKHLVNARTREILPNANIVYRRFSKTLMHSLRKKVYVDFKPTKSLIYSVRTVRPPSSFAKLAFLEKKKISKFVSRELETLTGSTDTEILVDYILTLLNRFSVNSADFAKYIEKIFGNRKYSILFSKELETFLRFRCERIQEFDEVLLARYFLSKYCSKKNFVDLTKTAIII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ9</accession>
    <name>A0ABV2AFJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000068">
        <property type="protein sequence ID" value="MES1918470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19828" checksum="9DCCA8AB3151F0D4" modified="2025-10-08" version="1">MHLSIDVDKIAENRQVLIICLDPFLDFVISDDKDELLYFKGEVLIKCVGEQIFFVDLFKRKNRKIKNLKCVEDLKPFIGQQEIKDQCVNEALESSIVLYSGIEPDFYENGLRLTGRCGLDDLNFPEYIQIKCQNGRYIYSGENGLIDNISSYCTRFYRINDTKQHCYITI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP0</accession>
    <name>A0ABV2AFP0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein SDA1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SDAD1</name>
        <name evidence="4" type="ORF">MHBO_000480</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for 60S pre-ribosomal subunits export to the cytoplasm.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the SDA1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027312">
        <property type="entry name" value="Sda1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012977">
        <property type="entry name" value="SDA1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12730">
        <property type="entry name" value="HSDA/SDA1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12730:SF0">
        <property type="entry name" value="PROTEIN SDA1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08158">
        <property type="entry name" value="SDA1_HEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="SDA1 N-terminal" evidence="3">
        <location>
            <begin position="4"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="177"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="425"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="461"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="183"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="425"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="464"/>
            <end position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="497" mass="56784" checksum="53B95D8B63CE4AF4" modified="2025-10-08" version="1">MQTTTPEIRLSIAKSAIFLHNKNIFNNFAYFQKIFDLFNITDKALKSLIFSHLTNYLRNNKTGFKLSGFTKFLTTQTSSDNPSLAKKSLSIIAKLYIQDSSAQWRNAHIANIIANCCFSRFSPLTKNAAKFLLGEFNAFSSKQILDRKIAKERFSEQRKSLSISQKVNKRKIKRSKKLKKLKTKSEKLSKMDENLTDSENNPKTNNNNNVDFGPIRSLNDPLSFSEKLFKKLKNCRDGFEMKILLMKLLSRVLSCHCLMLPGFLSFLQRYLQPHQKNVSAVLSALAQSIHSGVEKEELEPVLAVLAHNFVTDRSDVAVMTIGLNTIREICSRQPMAMDKTMLADLCQYKTSHSKPVAMAAKGLLSLYRQVNPALLSKKNRGRICVSKEVDVVQSDSSDNSEEDKITPEFPVEKKDLEIGIKNKKDRQKLKESHKKAKKAAGATNEDKKRFKNFKLTKYSEAVRTKSRRSQAQKRKIAGKHSKRLKLKIHRKFKRKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU3</accession>
    <name>A0ABV2AFU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Survival of motor neuron-related-splicing factor 30</fullName>
            <ecNumber evidence="5">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SMNDC1</name>
        <name evidence="5" type="ORF">MHBO_000514</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000084">
        <property type="protein sequence ID" value="MES1918561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd20379">
        <property type="entry name" value="Tudor_dTUD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04508">
        <property type="entry name" value="Tudor_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002999">
        <property type="entry name" value="Tudor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46297">
        <property type="entry name" value="ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00333">
        <property type="entry name" value="TUDOR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63748">
        <property type="entry name" value="Tudor/PWWP/MBT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50304">
        <property type="entry name" value="TUDOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Tudor" evidence="4">
        <location>
            <begin position="89"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="197"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="225"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="28200" checksum="008D1313EBC45216" modified="2025-10-08" version="1">MSEENFPQRLKEHKTQLRSVEKLLQKDPANQTLADLQKDLINVIAATEKFIKTKSLKAARNASSEADKKLDASPEKKAIPREWGVYKNDWKAGERCQVMYTDRRWYMAEISEIDAENTASLILLDNGNEHAAPCKRLRTYVPMLREDVQKDSDVKAIWEFDGLFYDSKVVALNEDGTFQVLFEKYNHKDNVRLEDIQPKPKKQQRKTAISFRDEDGHKSSMSRRTCCRTRKTRNSWRRGSASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU9</accession>
    <name>A0ABV2AFU9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glutathione synthetase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000143</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005615">
        <property type="entry name" value="Glutathione_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014709">
        <property type="entry name" value="Glutathione_synthase_C_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11130">
        <property type="entry name" value="GLUTATHIONE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11130:SF0">
        <property type="entry name" value="GLUTATHIONE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03917">
        <property type="entry name" value="GSH_synth_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56059">
        <property type="entry name" value="Glutathione synthetase ATP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="159" mass="17800" checksum="13B4E5764F79580E" modified="2025-10-08" version="1">MIETSNCLKAPTVGYQLAGCKRLQQAFSRPGVLSKYLNAAEADILAKYFNESHNFEGENKAQIIDKILADPVEWLLKPQREGGGNIIEGENMCKILREDKELKGLIAMKKIWPVESSTVFSKNGVIFGARSVSEVGVFGTFLRHFNIFVFSLPKMARRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG86</accession>
    <name>A0ABV2AG86_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000368</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000055">
        <property type="protein sequence ID" value="MES1918398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004179">
        <property type="entry name" value="Sec63-dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24075">
        <property type="entry name" value="SEC63 DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24075:SF0">
        <property type="entry name" value="TRANSLOCATION PROTEIN SEC63 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02889">
        <property type="entry name" value="Sec63"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00973">
        <property type="entry name" value="Sec63"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158702">
        <property type="entry name" value="Sec63 N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="10">
        <location>
            <begin position="1"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="513" mass="59461" checksum="38C5551F95A234B3" modified="2025-10-08" version="1">MSQIKKKYYQLSLKYHPDKIQKGKLNVETEKKYILIKKAYQTLTDPVARENFKHHGHPDGRQGISITIGLPSFLTSNENEKLILFVYVASLIFLIVSVYFWWKKASKFNSNGVNNDTISILTMEIKQSSLPQNFLESLSLCSEFRKLEIPDQKKFDELFKYCRNKLRLSKHNYLPSINYSWSLLVSHLFINEIPETFKKDQIFVLTTLEKILTSLMNEMVATDFWARQLIMKKGMKMDTINEINNLKIPFVPIKSLIILRQHLSQKLRFGGDGLEQIPHVDSRMAKFLHKNKISSFFKFLDSFGEISLGQNSIAQQKIKMPTKTLLGFLKNLNEAKIKDINCFIEAVPHIDIKTAIDGGNEILEGEKFSLNISLRRLSRQGSLDFTEVKEEIKKLSSVGANKIKAKGGPNVDTENNKIPKGKTKVKKQKIKTLKMRQQAHCPFFPTKKFENWTVVVQKRGQNSFEAIKTISFDRENFNWKLEILPEENGRFVYDITVYSDCYVDLKFRSIISF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGE4</accession>
    <name>A0ABV2AGE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000652</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000115">
        <property type="protein sequence ID" value="MES1918736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20302" checksum="2435E5193187E255" modified="2025-10-08" version="1">MALLADNLYIIVQYSKDEFVGKPSYSQTILSFLRIYHFVKNINLLCIDCCANNKILNILNEEKFKNENNSILEEKMDNSLKFGQTNSDILISSLMKILCKINKRANEDAQNQIILFTETDFSNFSYFARCKMTSCFQTAIELKNAKIDIVLFPNRNNVLEVPRYVKEVFKNKKGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG8</accession>
    <name>A0ABV2AGG8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">tRNA(m1A58)-methyltransferase subunit TRM6</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">TRMT6</name>
        <name evidence="7" type="ORF">MHBO_000693</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TRM6/GCD10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000125">
        <property type="protein sequence ID" value="MES1918785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017423">
        <property type="entry name" value="TRM6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12945">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12945:SF0">
        <property type="entry name" value="TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04189">
        <property type="entry name" value="Gcd10p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0819">tRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="331" mass="37512" checksum="1D2A465866734CE8" modified="2025-10-08" version="1">MLKNMDKTNRIGSGDYVIIEYLNGHKIVKKIENGKNIKIFKKKVKCDFLIDTEYNLQYLIDDAGSILLDTKPGNYESLADNNDNNENSEIGDNKKVKLTDGERFKIEKTAKKRLLKKRKSFSVAKTNAVNLVNSLSPRSILFLRDDSLAKILTLANLNYKSTVIVYDHSEGFVTGALCQRTSGKVVSVLRCSEKSNSKRKFSNCNFNKFNFEKCPNVRFIRKGFDDLDENDIDGDFDSFVALFNAKDDFNAIAKKIILENLRPNGHFVFYSQFFEVLSQLAKMITGEEMGINLRLSSSLLMEHSMEKDRTRPINVSAGSSGFVLSGIFIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY2</accession>
    <name>A0ABV2AGY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">BRCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000822</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000159">
        <property type="protein sequence ID" value="MES1918935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BRCT" evidence="1">
        <location>
            <begin position="5"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="235" mass="27745" checksum="971E35289C8711DD" modified="2025-10-08" version="1">MPKKIKLSKLTFTIDDDDSLSKKAISAIVTKFNGKISPRLSKTTNFLITTKNQIKKNKRNVQKASKLKIKCIPVEALFMNNLMKQKQNDNFWEKDNNNVIRLYNGAESCFLKLNKNELTIQNKIKKKIIRKKLKFPNENLAEKSLFKNILECAKNNFCTFKPKKKIFEKSKSVDFKFDRKTSTQKSESVPKFFFKNYKKSPKQYEFMRQSEFKSEIAVNSKRKIDFYSPLFQIEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY9</accession>
    <name>A0ABV2AGY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SUI1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000163">
        <property type="protein sequence ID" value="MES1918951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.780.10">
        <property type="entry name" value="SUI1-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050318">
        <property type="entry name" value="DENR/SUI1_TIF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048517">
        <property type="entry name" value="DENR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001950">
        <property type="entry name" value="SUI1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036877">
        <property type="entry name" value="SUI1_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12789:SF0">
        <property type="entry name" value="DENSITY-REGULATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12789">
        <property type="entry name" value="DENSITY-REGULATED PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21023">
        <property type="entry name" value="DENR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01253">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55159">
        <property type="entry name" value="eIF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50296">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SUI1" evidence="1">
        <location>
            <begin position="49"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16885" checksum="360A76FFF2F9DFB2" modified="2025-10-08" version="1">MSEEAFPKSIQYCRICTLPVEYCKNGENPQQCEKAKWKKPEDQNFPTEILIQISRRKYNKEAMLVSGLLEAPGVDKSKLSKSLKKLLNCGINVTEGKLLIQAVKQRELVEYLVGELKVPARKIFYAGIKSKKKPVFSKMGKMVNVFDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH07</accession>
    <name>A0ABV2AH07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cleavage polyadenylation factor subunit fip1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">FIP1</name>
        <name evidence="7" type="ORF">MHBO_000862</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FIP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000170">
        <property type="protein sequence ID" value="MES1918978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007854">
        <property type="entry name" value="Fip1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044976">
        <property type="entry name" value="FIPS5/FIPS3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36884">
        <property type="entry name" value="FIP1[III]-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36884:SF6">
        <property type="entry name" value="FIP1[III]-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05182">
        <property type="entry name" value="Fip1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pre-mRNA polyadenylation factor Fip1" evidence="6">
        <location>
            <begin position="15"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="62"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="93"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007459"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF05182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="12327" checksum="7DB01E56FE3F8315" modified="2025-10-08" version="1">MASAENKKLYPSIYDLDIDSLSEKPWRKSGSDLSDYFNYGFNEESWRAYCARQVQMRVELKLEHNNKSRKRSRSRRSESYDSYSDENNAKNIIKPRYKKSKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH71</accession>
    <name>A0ABV2AH71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000883</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000176">
        <property type="protein sequence ID" value="MES1919003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12053" checksum="472052EE2B935E1F" modified="2025-10-08" version="1">MNGNMNIWIALILLCLILLMVLLKKVAFSFKKDAALIFVKKVIVIFFSILTIALSIIGLYLYIKLINLIVGKKSIINSIKNIFGKYASISENVIDISNFAKFYCCIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ0</accession>
    <name>A0ABV2AHJ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DUF423 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000946</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000193">
        <property type="protein sequence ID" value="MES1919077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006696">
        <property type="entry name" value="DUF423"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43461">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43461:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04241">
        <property type="entry name" value="DUF423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045807343" description="DUF423 domain-containing protein" evidence="6">
        <location>
            <begin position="22"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="121" mass="13437" checksum="B532F3EBC51E7AE7" modified="2025-10-08" version="1">MFGNKWLKLAGFNGASSLVLASLGAHSLNQKTKNPDFKRLWKKAQYYHSSHAIAMLAVTAMQRLIKPSALFFANSFFLLGTVIFAGGLYYKAYTGNEALWLKAMPYGQVLLLLGWLSLVFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ7</accession>
    <name>A0ABV2AHJ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="6">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">DBP4_1</name>
        <name evidence="9" type="ORF">MHBO_000804</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="6">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000153">
        <property type="protein sequence ID" value="MES1918914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd17941">
        <property type="entry name" value="DEADc_DDX10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="8">
        <location>
            <begin position="49"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="80"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="49"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="29236" checksum="DAD955133F97EE55" modified="2025-10-08" version="1">MALVEQNNQKSAKNTQAAHTNLSDRVISEAPPCAAALKLNPALVYQTKKHFSQLPISPKTLKGLHSGGFAKMTDIQKQAIPHALAGRDVLGAAKTGSGKTLAFLIPILENLYRHHWSSEQGLGALVISPTRELSLQIFQVLRAIGGNHSFSACLAIGGLSKGNAMNREKNLISRINILICTPGRLLQHMNETADFSCDNLRMLVLDEADRLLEMGFEREIKAILDNLPPVRQTLLFSATQNLNIVRSLANLSLVSPELVAVLFSNFAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL7</accession>
    <name>A0ABV2AHL7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">TLC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000815</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000156">
        <property type="protein sequence ID" value="MES1918929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016439">
        <property type="entry name" value="Lag1/Lac1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006634">
        <property type="entry name" value="TLC-dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12560:SF0">
        <property type="entry name" value="LD18904P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12560">
        <property type="entry name" value="LONGEVITY ASSURANCE FACTOR 1 LAG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03798">
        <property type="entry name" value="TRAM_LAG1_CLN8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005225">
        <property type="entry name" value="LAG1_LAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00724">
        <property type="entry name" value="TLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50922">
        <property type="entry name" value="TLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="118"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="201"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="TLC" evidence="7">
        <location>
            <begin position="68"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="285" mass="33463" checksum="B831BC6E061E4A2C" modified="2025-10-08" version="1">MFNLLTKPLKWALNPFARKFHGSSALIKDSPVININVLAAVSVILLTARYYFSKISVMKNENLKKIDNKEKTVENLWYSIYYSITTPIGFAICLKKNLYWPIENNLLDVPEAHFPPEIKYFVVFQLSFYISSLVYMVTREKRRKDFCQMVLHHINTIALIHYSVFYGFREIGVLILNVHDITDFFLYTAKYLNGVKNKLKNVCFVAFAVSYFLLRIVYYPIIAYHLHLFLSRADFLCFGEILIGSFMLSVLVVLHVYWFSLILKIVWRIFSGNDQIRDIRSDDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR2</accession>
    <name>A0ABV2AHR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001072</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000227">
        <property type="protein sequence ID" value="MES1919211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15735" checksum="66FF58E4FAD18D63" modified="2025-10-08" version="1">MDANGNKQRLELWNLNTKKISETVSSDKGNLEYPKYEKLNKHKISETIKKIYKFQNSGDSGNSKFSQELDTTFQSLLKLTVSKPLDSVDSSLVLDTILLKAFNNNVEKASNTSEHIRNQIDDYFFKAITMLKFSFRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW9</accession>
    <name>A0ABV2AHW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001130</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000243">
        <property type="protein sequence ID" value="MES1919271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006876">
        <property type="entry name" value="LMBR1-like_membr_prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31652">
        <property type="entry name" value="LIMR FAMILY PROTEIN DDB_G0283707-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31652:SF0">
        <property type="entry name" value="LIMR FAMILY PROTEIN DDB_G0283707-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04791">
        <property type="entry name" value="LMBR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="81"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="159"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="330" mass="36210" checksum="924AF32F9E354CCB" modified="2025-10-08" version="1">MNGNDISLIITICVFPFLLLVCAALFVTRFSHPDDDTGIAPKLIAIVLMAFAFTTTIAVPASGANGSGATDISDDVLFQTFSGVTVALVVLVAPFSIFFFNAIFVKYGGDNLSKRIVKSLVGTSVCLAVYLVVLLPIFFSASDRSLSLLEYAIAVMDFIAWFPFCVLLGIGLVALPATLFCYWKYRPSPMQREDYDACRKALGARARQLYASGQEVLKRFCSPKQPRRHELLLAAKFGQHLRGSGQSRQGGLLEPAGVLPVQRRQPDLAVGAPRPLRLLCSDERVLGRGHRSGRVGLRAAPRGLDRDHRLRRDNRFPFSPKTASTSFRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI18</accession>
    <name>A0ABV2AI18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000998</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000207">
        <property type="protein sequence ID" value="MES1919134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20119" checksum="3F963C2CFC84850D" modified="2025-10-08" version="1">MPKTVLTALAQNLLKRPKANLKSACSKRPFTAKFENDLSRMNANSFSATKINKRLSFLIQKFAQNNETATSNSSLKSIGFQVQNLNYDRKRHQIDLVWDNDPRTAAKAAKKIVAAAKPRLSNFVGNNMSFFRTPALKMTHKSDEKLGGFNKQNFECLMNGFAKELNKESRKAETEDNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW6</accession>
    <name>A0ABV2AIW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000338">
        <property type="protein sequence ID" value="MES1919605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="170"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="173"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="211"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="25862" checksum="54E503643338ED15" modified="2025-10-08" version="1">MSFVTRNEKDLKSIFLNDVDDPTQLTFDSDGTDYFLYSTENPNKFHVKFEPKSNSSGKSIKIYNKGALVSGCPFSVAKKYPDFEVDENNNLITFTDIENPNLIQLQSSRKLDYDIFEDKKEPSKFHLQFKNQGNIKAKVNITYDGHILNKAPINIGKNELIEPGKLLMSSMDENNKQKPDLHSNKDTGSDKNNKLGRLINVHNQEKPSAPKLQSTRTNNGKLLYSGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ13</accession>
    <name>A0ABV2AJ13_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Kringle domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001096</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000236">
        <property type="protein sequence ID" value="MES1919237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00108">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.20.10">
        <property type="entry name" value="Plasminogen Kringle 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000001">
        <property type="entry name" value="Kringle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013806">
        <property type="entry name" value="Kringle-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038178">
        <property type="entry name" value="Kringle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050759">
        <property type="entry name" value="Serine_protease_kringle"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261:SF7">
        <property type="entry name" value="KRINGLE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261">
        <property type="entry name" value="PLASMINOGEN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00051">
        <property type="entry name" value="Kringle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00018">
        <property type="entry name" value="KRINGLE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00130">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57440">
        <property type="entry name" value="Kringle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50070">
        <property type="entry name" value="KRINGLE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0420">Kringle</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046239193" description="Kringle domain-containing protein" evidence="4">
        <location>
            <begin position="19"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="526"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="domain" description="Kringle" evidence="5">
        <location>
            <begin position="143"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="563" mass="65502" checksum="C23DB9B826EA5854" modified="2025-10-08" version="1">MDIFLIFLIFGMMRPFQARPQYTLKDFDSFPYMYGQPDSASKAFQTCQRYRKRLCHKPELERYYKTGRYGCKHFWAYHPDLSMVLSTAILNKNNKCLKTFDYTGIVPMFQHVYYSGYVYYCAIERGPYDGLDLYLPICKDCEGTGKEYKGTLSKTAKGYKCQNWDKLYPQKHTFKLAAFDQNFCRNPDERSKPFCLVDDDKAKEKWDYCDLNCKPYGNFDYCKISFFSEKYFRGKRCDFSVGRAEFKLFSIDGKNCLHNVVVKSIELKGQFCIGHISNYAQMVKNKAIENFRPTVLKGFVLYDTSAQVLLKRYNSFFDYINNHDQYYTLCTPAQVDEAANEIKDESKDRVGRTNVFTKHGKLFMEYSYGMQSSSKLKGSWCCENKNITIPRRIVSIDKAEKECESQSYKTTFLVRGKEITYNIRKRMATFAELQVNVVEYGLELNTFCLVKLSEYPRHIIATNGKVHFVRNTGQVCCVDKDCFPLNYPCSIDSDCCTLKCVNALCFDENAPQDDRNSGKLEGKIPAWLRTLIFFGFLFAFSCCIRCCCPERRLISGSTIPHDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ51</accession>
    <name>A0ABV2AJ51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">ABC-2 type transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001498</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000378">
        <property type="protein sequence ID" value="MES1919716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC2_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050352">
        <property type="entry name" value="ABCG_transporters"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041">
        <property type="entry name" value="ABC TRANSPORTER G FAMILY MEMBER 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041:SF139">
        <property type="entry name" value="PROTEIN SCARLET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="36"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="107"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="184"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="domain" description="ABC-2 type transporter transmembrane" evidence="8">
        <location>
            <begin position="2"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="223"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28491" checksum="B134B57A0C3BE955" modified="2025-10-08" version="1">MIINQSAGPLFETVSVFFLVKQIFLREYNAGMYSSLTYYLCTFIVTGLLQPLYTLIFCGIIYPMVGLRPGAQYFFMLYLALLLCKYCALSLAFLIGTTFSKIQYSQIISPIILYILILFGGLYINLNNINDVLKSIQYIDFVRYAYQILVNNEFVGQTYQCIASNCPVSGQQIVDELGLGVKTLAIPIIAIISITIILSICAAIMIKIRIPKFKQLKPIQNNSDKDLSVKESPSEKYLDIEESSKEEQRINV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ68</accession>
    <name>A0ABV2AJ68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Transmembrane emp24 domain-containing protein 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">TMED10_1</name>
        <name evidence="12" type="ORF">MHBO_001256</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Endomembrane system</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 8">Membrane</location>
            <topology evidence="1 8">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the EMP24/GP25L family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000283">
        <property type="protein sequence ID" value="MES1919418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015720">
        <property type="entry name" value="Emp24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009038">
        <property type="entry name" value="GOLD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036598">
        <property type="entry name" value="GOLD_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22811">
        <property type="entry name" value="TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01105">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01190">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101576">
        <property type="entry name" value="Supernatant protein factor (SPF), C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50866">
        <property type="entry name" value="GOLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0732">Signal</keyword>
    <keyword evidence="3 8 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045139006" evidence="10">
        <location>
            <begin position="20"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="GOLD" evidence="11">
        <location>
            <begin position="30"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="24607" checksum="B1D1E7DEBD735CC4" modified="2025-10-08" version="1">MMLSQIIFVFLSLFQIVLNLDLVLWGKNPRTCISEHFKKDQDIDIEYATINAAQFDKGDLYFTVTDPKRYPIYANVNIVGGFKSTAEQKGDYQFCFSATSLSSKNSNKQMEITIEILQEDIVVKKELEKFAKEEKEMAPIIRELKAIEQKIDRAYFDMRKLRQSMISINSYNNSANFRVKLLGIVSVLVLCALSFLQLRFLRRFFRKKKII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE5</accession>
    <name>A0ABV2AJE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cullin-3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CUL3</name>
        <name evidence="5" type="ORF">MHBO_001414</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2 3">Belongs to the cullin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000341">
        <property type="protein sequence ID" value="MES1919614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1310.10">
        <property type="entry name" value="Cullin Repeats"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.130">
        <property type="entry name" value="Cullin, Chain C, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045093">
        <property type="entry name" value="Cullin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059120">
        <property type="entry name" value="Cullin-like_AB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016158">
        <property type="entry name" value="Cullin_homology"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036317">
        <property type="entry name" value="Cullin_homology_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001373">
        <property type="entry name" value="Cullin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016159">
        <property type="entry name" value="Cullin_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11932">
        <property type="entry name" value="CULLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00888">
        <property type="entry name" value="Cullin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26557">
        <property type="entry name" value="Cullin_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75632">
        <property type="entry name" value="Cullin homology domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74788">
        <property type="entry name" value="Cullin repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50069">
        <property type="entry name" value="CULLIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cullin family profile" evidence="4">
        <location>
            <begin position="357"/>
            <end position="584"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="627" mass="74898" checksum="3620EF966F1464FF" modified="2025-10-08" version="1" fragment="single">LKDKADQLIEKIKDGMLGQIDRIKLIELYRHTYDLVHHKHGERLYKNIQNFLEIRAKEITSKIKKIDEKENDLLSSFTTIWKKYSDFIKRASDILLYLDYRFCRERDEQTISETCIKSFYNQFDRIDNFIEKLSDSIIENCFSTHKDEYVVKEAINAIEAIDKHNKKQFYEKYFEPKFLERTRTNYNQILGEMFSELNYSNFLIKIDQIKASSMKGKMFISDKTRNKVATIITEISNNLCEKIIADRKKGLLYFIENNLIGEIKLFYKNCQSSKLVFEKALNVNREYFNSESGRIRLYGETIRKIDNENDFESTKQYLGKIIRFQEKMDLVNKNSAIEKKFWFSYETEKDENFILNFCRYYDHLIENRLISTQSDLAKYKIPLMLMLIKDKNELEKEFNKNLRNRFYRNKSLNIEENKNCSKMEKLILKPINEMKLFLIENGIRSNINDHIRNLKNYPVLSKSLNEKIQKNFGIKMSLFVVKNFNWKDLEDKYENVILPNELENIFKEAQKFYKSREHRKAITFLPIKNNFEIADSQNFVLKCDLGQMLIMLLFNEYEQIDFETLLVKTGLTETEAINSIELINRKSGNLILIMSENGKKWSELVDDKKRGIVVDRKKTLLRLNEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ8</accession>
    <name>A0ABV2AJQ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001664</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000444">
        <property type="protein sequence ID" value="MES1919921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="102"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="190"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="30986" checksum="CF68A82B7AC345B7" modified="2025-10-08" version="1">MAEKKARTMEIELKKLLSETNLELQKTKIDIEKEIRRAEKMEEGKKMAEKKARTMEIELKKLLSEKEQELKTAHLNKEQMRIELEKELERIKLAKEKVERRAEYEEKTAEEKNRDEETKSDGKIKKEQKEKIERKIEDINLFLQLRLFFSFFISLESELQSEGSRNLNEEAKPEKTKVDDFLKSMELKNLHVCRRLVDRLLEEVQNYQREMAENADTVFLVALDDNGVDKKCNEQNLKNLKETIETEINIKTETPTKIFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU6</accession>
    <name>A0ABV2AJU6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001518</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000384">
        <property type="protein sequence ID" value="MES1919739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="97" mass="11189" checksum="8ACF2D1B95B1CA62" modified="2025-10-08" version="1">MNFIKLVFSFFFSIASIFFIAASVMNPYFFKIESNGTKFIAGILGFSQKIKIQFSGFTKYEGNYQFCLDHCDKVFFSNSSCKKDGATLITYCWLLQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU9</accession>
    <name>A0ABV2AJU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001677</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000447">
        <property type="protein sequence ID" value="MES1919933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12282" checksum="B9A4C80794FBCACD" modified="2025-10-08" version="1" fragment="single">ITPVNSFGEKNEPQSVDVSGIISLIFVKISNEEEFEYCSPTDPFFAITLIYSEEIVKLRVAECLLEAQILKIKEVSSSNTFRRIKVDILKNHKNECIRFPIKTFMPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD6</accession>
    <name>A0ABV2AKD6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RGS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001848</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000527">
        <property type="protein sequence ID" value="MES1920134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07440">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845:SF192">
        <property type="entry name" value="DOUBLE HIT, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845">
        <property type="entry name" value="REGULATOR OF G PROTEIN SIGNALING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00615">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01301">
        <property type="entry name" value="RGSPROTEIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00315">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RGS" evidence="1">
        <location>
            <begin position="41"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="19012" checksum="95DAE6BBF5612188" modified="2025-10-08" version="1">MLFLYANGFMIDGHMFVSYFMIAILTFNKSSQGKLIDNNQLFDRMLTDKNLLQKYYKFLVKEFSAENLSFLQTIAVYKRQYESSKKKHLFDTIFSNFIKKNSRFELNLSDRTKKQIFFAVEKNLADKNVFNKAETEIKDMLRNDSFRRFYLENKMDFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF7</accession>
    <name>A0ABV2AKF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001523</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000387">
        <property type="protein sequence ID" value="MES1919747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="346" mass="40221" checksum="6DC7D5EDE5B3EAAC" modified="2025-10-08" version="1">MTQGYFFSCLLGKEVVVVDLENDARISRFAGPAVSTNVVKIGDYFLEIFFTAVRSPKYVSSMESDQSYIFHLIHERNFLYSDLPIRIVANQMSVVDENRGRSDVEIEFEKNDYAFINKVKLFVEQCPFMYDKYEEKKSGNSVVWSFKEYKGPKVMLNDSLKDKQKLDILKSLLTVLLESQRNCLYLVKKIPPANMLLDTENNLKVHWICFSSKKSDQIGFALASLESMRMMGDDIDRRIDAVKNFIEQHGFTADIFDQDFLSETYPMNLNGWKMLTVMSGSSVYFYDKTGPSVYRLKEDNLTNFEIWHSPYIVNLTTDGKVPPLNEIVHQETFGRYKIYFLKHSTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKM7</accession>
    <name>A0ABV2AKM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001912</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000555">
        <property type="protein sequence ID" value="MES1920221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="149"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="29515" checksum="839C2C6455703447" modified="2025-10-08" version="1">MKNSALKKLGPPLRVKTDVDSFGELNSAKKTTTQLFQKNKEISIKDYSQKRNYDASEKRRDRSLENNKNEIILKTPILSQPKSALKLITNKLEKSKMPLKSIKTTNRKIDFEQNLKNSRERAKSPNYFNRKKVNFLKLETEIRIKKPVNKLSPQKEARASASVAQPTSSTGRSKKRSRERSMTLQTLMGISSRNIVKKTFENGKTIFVFVVRGQNYVAKTQIGIGGYSCVYRVIIFKLKFRIFVFGYFSFNDQIDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL06</accession>
    <name>A0ABV2AL06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Activator of Hsp90 ATPase homologue 1/2-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002034</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AHA1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000628">
        <property type="protein sequence ID" value="MES1920356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013538">
        <property type="entry name" value="ASHA1/2-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08327">
        <property type="entry name" value="AHSA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Activator of Hsp90 ATPase homologue 1/2-like C-terminal" evidence="2">
        <location>
            <begin position="14"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15361" checksum="C02DD3B009CCF402" modified="2025-10-08" version="1">MSKSTAYLELVFECNADDVFKAISTEEILRSFVGFGCSVDFKNGGKFSLYDGSVTGTFLSIKKNKQIVQKWRISSWPEKKSSTAKITFDGDSDGVCTVTVEHSDLPTDFSPDMAKSWWENQMFKPMSMACGFRFGED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL11</accession>
    <name>A0ABV2AL11_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002037</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000629">
        <property type="protein sequence ID" value="MES1920359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33828:SF2">
        <property type="entry name" value="NUCLEOLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33828">
        <property type="entry name" value="OS05G0596200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="24895" checksum="8878526F99D0099A" modified="2025-10-08" version="1">MQKEEKREKEILNKSKNEETKKLNKSKSKVTKKMKIAKKSKIEESNKEKKSKNKKLKKLKNEKLKKPKNEKSKKSKKPKNEKFEKSKKSKKPKNEKLEKSKKLKKPKNEKLEKSKIIKNEKLKKSKIIKNEKSKKQNKIEKKTNNIIKKPKFQKPGQRFKEPDQNDSLLIFYGSLRKQIPESKMAEKWLLTHGCLPENEAKNVFERLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC6</accession>
    <name>A0ABV2ALC6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001975</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000589">
        <property type="protein sequence ID" value="MES1920289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03213">
        <property type="entry name" value="ABCG_EPDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC2_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043926">
        <property type="entry name" value="ABCG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050352">
        <property type="entry name" value="ABCG_transporters"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041">
        <property type="entry name" value="ABC TRANSPORTER G FAMILY MEMBER 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041:SF139">
        <property type="entry name" value="PROTEIN SCARLET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19055">
        <property type="entry name" value="ABC2_membrane_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="355"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="385"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="426"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="465"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="495"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="579"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="21"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="629" mass="71470" checksum="2FF2CC0C51F7965B" modified="2025-10-08" version="1">MESSNNSNKSEIEHSSNQIRLKFENINYSLKKGNKRQVLKNCSGVALPGRLLTIIGTSGAGKSSLMNILSGRLRTNRNVEVTGDIKLNGSSKYSSEAFKQNTAYVLQEDLVFETLSVAETFDLSATLRLPSDMSAERKKRRIESIISNLGLERCRNSMVGGKEIRGVSGGERKRVCIGNELIINPSLFFLDEPTSGLDSYTALKIVKLLVNLARTGRTIIVTLHQPSSEMFANFDDLLVMSAGRVVYNGSAQRSMAVFAKLGSQVPVNSNPSDHYLSVVQVEKDKDLEKIDYFADNYLGYLKEEIDNDEDGQRKSLLEKPLTAEKIKKPGLMAQIYYLTIKRAVKNYIRTPSLTYLRAITTLFFSIICGILFYKLEFDQAGTNARLGSIFFILVNLLLNSVLNVVLQFPLEKKVVLNEVSNGMYTILPYFISKFLVELPINIIVALVYQLIVYFMIGFENTVKQFFIMFLVLILWMQIGYFIGMLIGVVAPTSELAVPLVSLTFTPAMLFSGFFINASQIKIWLRWATFVNYFRYILDMLFYNELNNNIRKYKVCILNECRFLTGKEVLSTIDRDDIKFWLWFGIGVIFMLFFAIITYVILLFKTNVNFGKPLYYHKSSIPTEEKKEEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF3</accession>
    <name>A0ABV2ALF3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001919</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the endoribonuclease YbeY family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000560">
        <property type="protein sequence ID" value="MES1920228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.30">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00009">
        <property type="entry name" value="Endoribonucl_YbeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023091">
        <property type="entry name" value="MetalPrtase_cat_dom_sf_prd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002036">
        <property type="entry name" value="YbeY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020549">
        <property type="entry name" value="YbeY_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00043">
        <property type="entry name" value="rRNA maturation RNase YbeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46986">
        <property type="entry name" value="ENDORIBONUCLEASE YBEY, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46986:SF1">
        <property type="entry name" value="ENDORIBONUCLEASE YBEY, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02130">
        <property type="entry name" value="YbeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55486">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01306">
        <property type="entry name" value="UPF0054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19678" checksum="AA613102019BB124" modified="2025-10-08" version="1">MSCRLFKHEKFSNMRSSFFRENAKEILFFLNLKKCSFNLSLILNDEMKYLNNLFRQKDKATDILSFRSQFDATESKSPKQFLCQKQLGDIYIAPFYFKQKLGLNPNCNLENCALKVENYMRLLIVHGFLHLVGWDHSDEMETMENIVLERCKIKSPKHRLFGGLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG6</accession>
    <name>A0ABV2ALG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002158</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000703">
        <property type="protein sequence ID" value="MES1920494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="136"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="136"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="169"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="198"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="216"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="538" mass="62183" checksum="863C54B770F63D0A" modified="2025-10-08" version="1">MLSYYWRRLSVNMWLHRTINKNTKKHVKFRSTIDKNYLLNELSNASCYNHCYSKEPVRFSATGGAAEGGLSSVLQKHENFLFNTNPPNPPSFLTPIEKLRKDPKNSHEINLGVPREIEIVHGIFLNLANAFFKQENDKTENSSPKNRVESADKIFQSENSIIQIPSKPKVTEENENFAKNDANENSKTLTETRKNKVDLNNLQTRKNEESQTIGNDKQKSSEQLKTNKIEQTETDDQKQKEILKFYTNFINSEKLDLAKQNPQKSFWDEVFGVYFGIGADYSENLESFAARRSISNGAQEETSAMRRLVLNSDWYYFLRLLHKLLVSLDKLRVGVYNSVGDDGMIRDILQMAKDGPKKIFEEQSQVKSKELFCQSLVLFFKTLKAAEILISDKTSLRLMSLCKSYVRCLVTLNRKKVYMNDKEDPEISTGLKSVRKLFMKRCADMNSKETLIYLESNINQHKMCFGYLKEPETPEKMFEQNSPKQKEERISIDQKQPEINTAPQMRQNLNVFSRMSINQSKETNPFLISTPVSPSENV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI0</accession>
    <name>A0ABV2ALI0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002137</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000688">
        <property type="protein sequence ID" value="MES1920472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="17869" checksum="E50C10D81D456BB2" modified="2025-10-08" version="1">MSNGGLLKPEKGKSSLDPILNPTIPKSDHIDFESIFEVVKKAAIRFVPEVESNFKRKSTLAVEQVFETAKKSFALDETTEKSLLNFNTLFRETLDIKGLLDVTFEISKLANQYQPAFKADFETIRGLVSSSDNSAAIEHCVKVLEGVTNLDNLQICDIVST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL0</accession>
    <name>A0ABV2ALL0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002212</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000731">
        <property type="protein sequence ID" value="MES1920551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022803">
        <property type="entry name" value="Ribosomal_uL5_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55282">
        <property type="entry name" value="RL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="228" mass="26617" checksum="25D10BC22188DE3E" modified="2025-10-08" version="1">MASSFQKRLAKQCDFVTSHLVTRPDFCYHRDNVVLPTMWDMFQYRDYMKVPQILRVVVSIPAHKSSFVKSRTDIYAAMVACRLFTDSKPSLIERRISEAGKKGRKIMRIAMVQSIVAGDKALLVLEKLATKVFPNKERFHGFKDSFESNGKHFNYQFDLNTLSGLDELEYEAETFKRIDKIRVGIHTSAKSYLEAFQLLRLYQVPIVMEDPFLKFKRRISKRTNTENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN1</accession>
    <name>A0ABV2ALN1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001986</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000597">
        <property type="protein sequence ID" value="MES1920303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="334"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="341"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="443" mass="48276" checksum="A5683A2C7AC9D64D" modified="2025-10-08" version="1">MDDDSKSNSSLQNAPFVFGDSKNLAETNKIFDSKKGEIDIFGGLKTKKEEKAKNEISQNKNLDIFGNTKNEASSSNNIFGEKKKSDKSAADFFGTTDEDTHKKNNKLLFGDGNSKTESTFGIGNNNQNFGLFSNNNKTESTFGIDKNNKMESTIGIDKNNKLFGNTFDTGNNKMESTFGTDNNKKTKNSFGVGSNNQIFSNTFGNNKNENAFGSGSTFGNNKIESAFGNNKNESTFGNNKNESIFGSGSTFGNNKNDSTFSSGSAFDNNKNESTFGNNKNEITFGNNKNEITFGINKNESTFGNAFKSGENKSLFGNLGNNKPNFNQSSFGNFGDHNPFGTSNSTGNNNNISANNTENDIFGSNFNKSASNIGDKRNIFAVNSDKFGGNKMFGNSKKEEEIDAFKPSVTIGDDFESSFSNTNGEKKSRKIIRGVRGLHQRGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN7</accession>
    <name>A0ABV2ALN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Splicing factor cactin central domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002242</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000752">
        <property type="protein sequence ID" value="MES1920586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018816">
        <property type="entry name" value="Cactin_central"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21737">
        <property type="entry name" value="POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21737:SF4">
        <property type="entry name" value="SPLICING FACTOR CACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10312">
        <property type="entry name" value="Cactin_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Splicing factor cactin central" evidence="2">
        <location>
            <begin position="91"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="50"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="355" mass="42877" checksum="073B2B1459FDAFC6" modified="2025-10-08" version="1" fragment="single">MDSDRKLYFGHDLKNNRFGDTDLSTPFVWKKKWKKKNPKLKGKELKKMVKQKMRKREKSLEKEISEVKVLRKRRQQEKEAMDQMREDIQKQLERENYGILNQKEEQFHKEQVRERALIRIKDGRENTFDTIFKNVLFALNSVDFLLKHLEIDKLVEMISKRRKNKHLRKRLEKILFLDEPFKTIENEWNPETLKQIKNEVEEILELDENKEFWEIIEKTVKFFMSKNNFNQKELKKLLKNKNLTELTELEIETKTKIENAKNGESGEVLDFEYWGEMAETIRIFKFRHLLDRYHKKAVDVKNLMENSESVRESLPRKKKLIIKSKEIKIINEKAVEPNPVKPENGKALEYLKNVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY9</accession>
    <name>A0ABV2ALY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Tetratricopeptide repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002180</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000714">
        <property type="protein sequence ID" value="MES1920514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031101">
        <property type="entry name" value="Ctr9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14027">
        <property type="entry name" value="RNA POLYMERASE-ASSOCIATED PROTEIN CTR9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14027:SF2">
        <property type="entry name" value="RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="205"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="461"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="265"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="477"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="560" mass="64705" checksum="F4CA281788D0474C" modified="2025-10-08" version="1" fragment="single">WIQILKFNASLLNLDLGNYEQALKDLSSLKFDLDKSEEKNNFHKNLKTDVDLSIAMANQHIFEKNEKILAQNEKSPLEKFADENPKNTLCNLILANKHSKNPEKSLSFYENIFSYDKNNSFANIAAANLILSNRSPKNATNSDDKTINGTESSLKIYKNYLRRVLSNDGNVFGLISLGVILAKKGATKEALKFFLRYKDFDEAIPSLWENVGNCYAFQGAHGNAIVMYSKALSLLSKEGDDIETKVSKTNLEILLAREYYYSGSKSESKSLLENLIRKYDNLDKNNEKLIKNDVNAPKNLLEQNIYRAWYNLALLKEDSADEILMSPHKKRTVKKLENAILLIKGAKTIYEQNLDKILNFCPNFGDKEFIEKQKLSKKIKKCEQILSQMDQMLATMKLSAEEERIKIETSEMEYKKTKMEKAKMAKEMAKEKIEVLKRKNELARQSENRLKDIKQKWKQVEKEIKSSKKRKRGRNPKLAEQKSKKAKDVSDKEKNESEENMFKNYVEERSDGELDYIPTGERFDDHYIVDSDEEAPNIALEYYKSKNTTVTKKIIESDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ4</accession>
    <name>A0ABV2ALZ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002296</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000784">
        <property type="protein sequence ID" value="MES1920645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="18016" checksum="61E568DE0DF88F34" modified="2025-10-08" version="1">MNGTRALDSNTDSKIVYNGNKERHSFLQENISQIYASARLIEKSMLLDETFLDDYPPESRAKLSTSEFTNDKFETENIKIPSNIAAKITDNKINSVCGLAPFFPLAWFACDEKFVLWSFTERKFFCKKKTFPSFDRSRRSHQGGRNSRISKQKLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM69</accession>
    <name>A0ABV2AM69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002393</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000846">
        <property type="protein sequence ID" value="MES1920755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="6167" checksum="0DD6775D7809E841" modified="2025-10-08" version="1">MDDIFSRRYFKFEDIESVGFEAVFSDQEIEEDYFENWKMKKIDNGNPFRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA3</accession>
    <name>A0ABV2AMA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribonucleases P/MRP protein subunit pop1</fullName>
            <ecNumber evidence="2">3.1.26.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">POP1</name>
        <name evidence="2" type="ORF">MHBO_002439</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.5" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000873">
        <property type="protein sequence ID" value="MES1920803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039182">
        <property type="entry name" value="Pop1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009723">
        <property type="entry name" value="Pop1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22731">
        <property type="entry name" value="RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22731:SF3">
        <property type="entry name" value="RIBONUCLEASES P_MRP PROTEIN SUBUNIT POP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06978">
        <property type="entry name" value="POP1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pop1 N-terminal" evidence="1">
        <location>
            <begin position="124"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="560" mass="65424" checksum="1BDF21D56C3C05A4" modified="2025-10-08" version="1">MSENRKTSKEIKKEKLLKLRGEIDICKNKDFNLPETIDIETFAASRLKEIERLISQQKINKIGKSAHQTIPRHLRRRSMARNPHILPKSLRGKALKDYSEKDMKKIKRRKKRKRVTSSALKIRRNLNKQNNAIWMETHLWHAKRMHMATLWGYKIPISPTAKSDKFLQKASCNDVAIYDFSYKICYQINLSENPQIFVFLKNLGFLNFSDINQNSFDKQYSTVIKTDEYEIYKIETDLFLWAHPSLKQSLECKMKSNNVKFCQRIFSRFKIIGAKSISLIKTTFSDISNNFAKSDFLQNFKNDNIYHEQIDINSAEKKFLVLMAINIWQQKPEIKNNKTQNCENINEVDIILPNKISYSIWLNFIKNGGKVFGLKNYLSFCINKGKLEFPFNQPFSEIIKNFTTFLTPKKSPVKFLTKIGNLAKIENAKINNIKSFKKSKMQQILVNLAEFYNEKIINDGKTKDYIIVRIKMLKGNPDPGSKIVLRCFGDNNVHHFGKKQFDKLEINGIVYQKTNSIKNGCVYLIGILLKENLENMRNGQLTVLNKMSRNGYKGIYKMIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB5</accession>
    <name>A0ABV2AMB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Kinase</fullName>
            <ecNumber evidence="8">2.7.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002428</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12717"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57660"/>
            <dbReference type="ChEBI" id="CHEBI:57733"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.140"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>1D-myo-inositol 1,4,5-trisphosphate + 2 ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + 2 ADP + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:32359"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57733"/>
            <dbReference type="ChEBI" id="CHEBI:203600"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.151"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the inositol phosphokinase (IPK) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.-.-" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000866">
        <property type="protein sequence ID" value="MES1920793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.160">
        <property type="entry name" value="Inositol polyphosphate kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005522">
        <property type="entry name" value="IPK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038286">
        <property type="entry name" value="IPK_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12400">
        <property type="entry name" value="INOSITOL POLYPHOSPHATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12400:SF51">
        <property type="entry name" value="INOSITOL POLYPHOSPHATE MULTIKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03770">
        <property type="entry name" value="IPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56104">
        <property type="entry name" value="SAICAR synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00036164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00036525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="283" mass="32714" checksum="C7EE6348151F200E" modified="2025-10-08" version="1" fragment="single">MDNLEKIKEKLLKSPKIEFSDCCVFNQIAGHGAVDSRLTFLSYPKEGKEAHRYLLKPAFSRGQLDLKEAQFYNYLSTLNSDNVLKQFTPDYFGTAFVPQDRLVSQYFLKLENISTKSKIQCSMDVKIGTKTYSPDDTPQKIKQVKEKYVFQEEIAFRICGMKVFDLNNGALSQHKKSDWGRTVNPDNLINSLKLFFDCGLSKAEIKKIIEKFLFAAGKLKKYFEEQMEFGFRSSSLLLLYSRNEIRLKMVDFCHVQSASNKIDFGYLKGISNFIEKLEFIDVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMC4</accession>
    <name>A0ABV2AMC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ATP-binding cassette permease mdl1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MDL1</name>
        <name evidence="7" type="ORF">MHBO_002445</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000879">
        <property type="protein sequence ID" value="MES1920811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18573">
        <property type="entry name" value="ABC_6TM_ABCB10_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394:SF1">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394">
        <property type="entry name" value="ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="48"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="272"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="304"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="51"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="544" mass="60816" checksum="84C9691A5E1BB339" modified="2025-10-08" version="1" fragment="single">FFRRKTFFANGRRVFARIDHGRLFCTKQKHKQVNFEGVLKILKPHSGLLCIAFAGLGVSAAVTMALPAAFGYVIDNIEKKHSSEKRYKIFAGLGVMFLFGGLGVLTRIFFFNLASEKIIFSLRKKIMSNVLKKKIEFFENVRSGDIVTRLNSDVVIMGKSFAGENLSSGARKLVTLFGSFVLMIYISPKLTAATLVIPPLIFASSRIYGRLVKRITKLIQKELGNSTSIADESISNIQTVKIFNRQKFENEKYKEAIERVFKASKKAITNSSIYSSAVNVVGNSVLLSILVYGSHLCTIGEITVGTLTSFLFYSLYVGISGMGLVRCYTDFMRGIGASTRVFELINGEDLRRTSLRPENPFKEKPFDITFEKIKFSYPSRMDNVILNRIDLNFSHGKKYAIIGESGSGKSTIISLIIRFYRPLEGRILFGDKDINSLPASTSRNSVGVVTQTLQFFSGTVLENLCYGIDGECQSFKEMNEKYNAPVKVIEAAKTANAHYFIKLLPEQYHTKIGTNNALFSGGEKQRIAFARALLCDPPVFLFDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK5</accession>
    <name>A0ABV2AMK5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RecA family profile 1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000946">
        <property type="protein sequence ID" value="MES1920906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013632">
        <property type="entry name" value="Rad51_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46487">
        <property type="entry name" value="DNA REPAIR PROTEIN XRCC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46487:SF1">
        <property type="entry name" value="DNA REPAIR PROTEIN XRCC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08423">
        <property type="entry name" value="Rad51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RecA family profile 1" evidence="1">
        <location>
            <begin position="10"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="31398" checksum="0AB452AB08836983" modified="2025-10-08" version="1">MPLVTLDQLKFTPLSTGCDKINQFLGGGLKLVNFQILKGLTEITGEAGTGKTQFCLQCAISAILNNNSDEKVIYLHSEGKFPVFRLKNLIEAILKSDTTNISSLDKMADETEKILSRIEIIAFSDSNKLLQSVNTTIPFLAQTKKIVLVVIDSVTAIFSNIAKKSERSFMLLRMSEKLKTLSFERKVPFLVTNQVVDIFPGDLQFQESLQGSFLTSNRRVKPSMGLTWSHCVDRRIFFKKKSDIKVVLYREMEIGFASDTKLSKIEFCVYQNGVKAIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM1</accession>
    <name>A0ABV2AMM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Histone H3.3 type a</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">H3A</name>
        <name evidence="6" type="ORF">MHBO_002534</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the histone H3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000960">
        <property type="protein sequence ID" value="MES1920927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22911">
        <property type="entry name" value="HFD_H3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000164">
        <property type="entry name" value="Histone_H3/CENP-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45810:SF1">
        <property type="entry name" value="HISTONE H3-LIKE CENTROMERIC PROTEIN A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45810">
        <property type="entry name" value="HISTONE H3.2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00622">
        <property type="entry name" value="HISTONEH3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00428">
        <property type="entry name" value="H3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="5">
        <location>
            <begin position="8"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11464" checksum="F3DC15EBD567D364" modified="2025-10-08" version="1">MQKRRYRPGQKALKEIRYYQKSTDLLIRKLPFSRLVKQISDEISDDLRFQAKAVEALQEATEAYLVSLFEDAYLCSIHAGRVTLMPKDIYLARRLRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMQ3</accession>
    <name>A0ABV2AMQ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">AP complex subunit sigma</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002243</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the adaptor complexes small subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000753">
        <property type="protein sequence ID" value="MES1920587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016635">
        <property type="entry name" value="AP_complex_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022775">
        <property type="entry name" value="AP_mu_sigma_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000804">
        <property type="entry name" value="Clathrin_sm-chain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11753">
        <property type="entry name" value="ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01217">
        <property type="entry name" value="Clat_adaptor_s"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015588">
        <property type="entry name" value="AP_complex_sigma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00989">
        <property type="entry name" value="CLAT_ADAPTOR_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AP complex mu/sigma subunit" evidence="7">
        <location>
            <begin position="1"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR015588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21683" checksum="EAD663AA43F45A71" modified="2025-10-08" version="1">MIQCIYLTSRAGRIRLKRWYDPKLSSKDKRRFIKEVNNLVLSRDDKLCNFVDYRDLRVVYKRYASLYFVCITDYEDNELSTLETIHFFVELLDNYFGNVCELDIIYNVKSVSIKNKKAYNVLDEFILNGEVYETNKSLIIGTLLNMDSIDFENERSTKKMGLIQRKILSRKLNKIGKSLDDEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMQ6</accession>
    <name>A0ABV2AMQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002554</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000975">
        <property type="protein sequence ID" value="MES1920953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12611" checksum="18B9463E3917D308" modified="2025-10-08" version="1">MTEEFLFLVVNLRVVVELKDPELVGEFLQCLRIFNVPENSNLIKLGVNYLIGSVKRGKRFRKGGWVNTTNFYTKYHAAYCAIVGLADDKLFQFVKMIGKNSEWDFILND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN14</accession>
    <name>A0ABV2AN14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Zinc finger matrin-type protein 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ZMAT5</name>
        <name evidence="7" type="ORF">MHBO_002640</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001045">
        <property type="protein sequence ID" value="MES1921042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000690">
        <property type="entry name" value="Matrin/U1-C_Znf_C2H2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50171">
        <property type="entry name" value="ZF_MATRIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Matrin-type" evidence="6">
        <location>
            <begin position="6"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="18296" checksum="84572E4AB8B3B156" modified="2025-10-08" version="1">MGTEYYFCDYCYTKFPSTTKNRKQHFSSKNHKERRKKWYNQFLTEQDIKLIEQAFVRPQQCPKNTKNNCDDPYCLFRHGERYSIKEQVRKMWLIRQLQNSPNLAEWKPVLKFGQLPKKFIEFCRNVENEEILAILGRFDIEHFINSFFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN62</accession>
    <name>A0ABV2AN62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">U5 small nuclear ribonucleoprotein component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">EFTUD2</name>
        <name evidence="4" type="ORF">MHBO_002700</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001094">
        <property type="protein sequence ID" value="MES1921118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04090">
        <property type="entry name" value="EF2_II_snRNP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01683">
        <property type="entry name" value="EF2_IV_snRNP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.870">
        <property type="entry name" value="Elongation Factor G (Translational Gtpase), domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005517">
        <property type="entry name" value="Transl_elong_EFG/EF2_IV"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908:SF6">
        <property type="entry name" value="116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908">
        <property type="entry name" value="TRANSLATION ELONGATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03764">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00889">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="EF-G C-terminal domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <feature type="domain" description="Translation elongation factor EFG/EF2" evidence="3">
        <location>
            <begin position="218"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="381" mass="42959" checksum="5502AAF371D309D1" modified="2025-10-08" version="1" fragment="single">DCSEFDCFGRVFSGIVRRGDKVRVLREGYSLDDDEDMCVKTIDDIWIFQGRYRVAINQVTAGNWALFSGIDAGITKTATLTQVEGNEEACIFKPLKFNTLSTVKLAIEPLKPSELPKMLEALRHINNTYPLSHTKVEESGEHVIVGTGELYLDCIMHDMREKYSDIEIKVADPVVRFSETVLETSSIPCFAHTPNKQNKLMMICEPLDPKISAELENNLIDIDWEQKKLSDYMQKQHKWDILAARSIWAFGPDKNGPNVLIDDTLPGEVDKEKLATIKNSIIQGFQWGTREGPLCDEPIRNCKFKIVQAEISDNPLHRGGGQIIPTARRIAYSAFLLATPRLMEPIYFVEIQAPIDCIAAIYNILGLRRGFVISEKPKPGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH6</accession>
    <name>A0ABV2ANH6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002774</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001157">
        <property type="protein sequence ID" value="MES1921211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="472"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="472" mass="54103" checksum="A3A6C86F746227CB" modified="2025-10-08" version="1" fragment="single">MLKQLEKWPDHKNLQIERFGGKRQFLRLLKLLSAESLSSKEKSTVSAQSDIKSRTALEKTRLKLLQIFENEASSETKSTPIITKEIFNDEENLALAANSVLYCENGENDSLTMRRLISEECVVHFIQAANNPIPTISVSSPGSCPYKAFADKKGKLHIPGARALYITFDSRCSLSSDLMTFLKFYADEERTQLLSSNRGGKDGYVNRNYSSFVVQSNKCYYHFRSTADNNYWGYIFKVHPVDLRIDDSKAINCMNIELAFWMFNTLIPTRSDLIKIDENLLRLYDALAWYVSRAKRGSKLRGVQLLNRIARGFYYCPFDKTLSNGRIANLSEQVALILKKVFKTEKKSSKLISQLVQSFSELHSILKLVSTKTEKKTLDSPNTQNLEQIGKYFFTLKKAAVFKENEEVEDITESAKRYLKQYLNRVLVIPSTNNGRNKHLSEKQHGPGVVWRFWLDLGKMVLDQNSNCVVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN1</accession>
    <name>A0ABV2ANN1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002824</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001207">
        <property type="protein sequence ID" value="MES1921271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09601">
        <property type="entry name" value="M1_APN-Q_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3480.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.390.10">
        <property type="entry name" value="Neutral Protease Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024571">
        <property type="entry name" value="ERAP1-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034016">
        <property type="entry name" value="M1_APN-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001930">
        <property type="entry name" value="Peptidase_M1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050344">
        <property type="entry name" value="Peptidase_M1_aminopeptidases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014782">
        <property type="entry name" value="Peptidase_M1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027268">
        <property type="entry name" value="Peptidase_M4/M1_CTD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533">
        <property type="entry name" value="PROTEASE M1 ZINC METALLOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533:SF174">
        <property type="entry name" value="PUROMYCIN-SENSITIVE AMINOPEPTIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11838">
        <property type="entry name" value="ERAP1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01433">
        <property type="entry name" value="Peptidase_M1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00756">
        <property type="entry name" value="ALADIPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55486">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase M1 membrane alanine aminopeptidase" evidence="9">
        <location>
            <begin position="40"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ERAP1-like C-terminal" evidence="10">
        <location>
            <begin position="331"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF11838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="438" mass="50049" checksum="98FCA1FFDB449DB0" modified="2025-10-08" version="1">MSTYLLAWFIGEYAGKTVESENGVSVSIFAPKDKLKMGMWALSVAEKTLTFYEEYFGIKYPLKKLDMLAISDFVNGAMENWGLVTYRDRAIYCDETSSLAAKEYVTSVVAHELAHQWFGNLVTMEWWSQLWLNEGNATFMQSLANAAIYPQFDIWTSFAHEKLEMALSLDSKLSSHSVEIEIEKASQINEVFDVISYRKGASLLKMLHEYIGDKAFRAGMTKYLKHYSYRNADSDGLWKFLAKESEKDVSGFMELFTRRQGYPKIDIELVSIKGKKHTFRLRQSRFLTSGKTTEKTIWKVPIKIDVSGEKKWVYMHSEVMEVDFDIPEFKYILLNADATGFFRSKHSKALAEKLMANMGGFPAKDRFMIVSDCSALFTAGEKSAAEMLFLLESLENEENNVVWTAAIGAIEKMRCLLRGSSKESEERLDAFSISLKFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX7</accession>
    <name>A0ABV2ANX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002897</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001281">
        <property type="protein sequence ID" value="MES1921363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10333" checksum="CE30D3C1B28C5365" modified="2025-10-08" version="1">MDKFRFNVLVQNVYKLVAIFSRMFVPESKYMADFMYNRAIGTIFMQTHSPNAAISSADDRIAKRTWLEQDVIDFIRMIDEYPTRLEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY6</accession>
    <name>A0ABV2ANY6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002918</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001298">
        <property type="protein sequence ID" value="MES1921387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10736" checksum="DF06F5B9F29C4FCF" modified="2025-10-08" version="1">MFKMSKGRIMACVVVVATTVSTIGYFFVANSKSNKNNKKAKIDLFLLLEKAKAELNDPGNFESSKKIIYVLSNISKFHFYSIEDKCVFVQNCIKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP05</accession>
    <name>A0ABV2AP05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002949</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001333">
        <property type="protein sequence ID" value="MES1921418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="58"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16049" checksum="AEC4A6AF6139C16F" modified="2025-10-08" version="1">MKSARNFRSRSLNRSNINSSFVPNRNGSSLKFENIQEMSRNKNHPNNSFLCCNEKKELERLKLLSNKLKIKIDILQEKVETLTDLNKQQEISISNKNSQIESIKIENQKISQNKQNSINLLKKSLKNEQFNTKRNDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP57</accession>
    <name>A0ABV2AP57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002987</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001362">
        <property type="protein sequence ID" value="MES1921453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8388" checksum="778A8FA57551D70B" modified="2025-10-08" version="1">MAQKQIYVVNRAQKKENVMIQMEPHKDYIDNQMKMAQTPDYLSNQNSTDPGLGFYFPETRVATGIDVGMYISP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE7</accession>
    <name>A0ABV2APE7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001312">
        <property type="protein sequence ID" value="MES1921399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="257"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="36068" checksum="F7BDC26607E46FCB" modified="2025-10-08" version="1">MLISALLKIDLTFLNENTEFVKTVGTKDNVDFNQIEKNNENFDHKIIENNLFYASTSGHVENYNFKNKKNFSKIKFTVKEKIVAMRFTDVFGNPNIFEGFFHEIYAIVVTLKRVLVIKMNNIKQTKIAEKTIQNDGIYVDAELISKSLLNAIVVVDDKGIVTVLSLFKLHCIFTSKIDFKFEKLKIFKNGDITAINEKTMKIFSIFFNEKNVRKKGPLTQHSQNTEIDIKKFSKIDIKNDFVDFDNVSDKIVSGRFFQNFKVAIKGLKEQLAEAISQEQENAKKLSELAGKTKTTAEKAKEMSSLAERIKNKFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API2</accession>
    <name>A0ABV2API2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA topoisomerase</fullName>
            <ecNumber evidence="3">5.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003115</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the type IB topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001509">
        <property type="protein sequence ID" value="MES1921583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.15.10">
        <property type="entry name" value="Topoisomerase I, Chain A, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001631">
        <property type="entry name" value="TopoI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025834">
        <property type="entry name" value="TopoI_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014711">
        <property type="entry name" value="TopoI_cat_a-hlx-sub_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014727">
        <property type="entry name" value="TopoI_cat_a/b-sub_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013500">
        <property type="entry name" value="TopoI_cat_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013499">
        <property type="entry name" value="TopoI_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051062">
        <property type="entry name" value="Topoisomerase_IB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10290:SF3">
        <property type="entry name" value="DNA TOPOISOMERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10290">
        <property type="entry name" value="DNA TOPOISOMERASE I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14370">
        <property type="entry name" value="Topo_C_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01028">
        <property type="entry name" value="Topoisom_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00416">
        <property type="entry name" value="EUTPISMRASEI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00435">
        <property type="entry name" value="TOPEUc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="DNA breaking-rejoining enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52038">
        <property type="entry name" value="TOPO_IB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="DNA topoisomerase I eukaryotic-type" evidence="9">
        <location>
            <begin position="1"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="197"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="active site" description="O-(3'-phospho-DNA)-tyrosine intermediate" evidence="7">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="38063" checksum="BF58839D20CD1190" modified="2025-10-08" version="1">MKKYESARALKNKIDFVRKEYMKDLNSDDQSNRQRATAVWIIDKLAIRVGNEKDTSITADTVGVCTLRLEHIKFLDDNTIKLDFLGKDSIRYQNKTKIDRVVYKNLKYFCKNKISSDIIFDKLNTRIVNAYLSELSENLTAKVFRTFNASITLQNELAKEKVDKRKTIDQKKYFYDEANRQVAILCNHQKTVSKTFNASLQKQLDRLNEMKIKLKELKKEYKSVSDTTKETETTKKNAKRKRNPMVVKNMIKRLKVRIEKQGFNIKLKKSTKEIALGTSKINYMDPRISVAWCKRNEMPIEKIFQKALLDKFPWALSIDPNFEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR0</accession>
    <name>A0ABV2APR0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">peptide-methionine (S)-S-oxide reductase</fullName>
            <ecNumber evidence="2">1.8.4.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Peptide-methionine (S)-S-oxide reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Protein-methionine-S-oxide reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003178</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>L-methionyl-[protein] + [thioredoxin]-disulfide + H2O = L-methionyl-(S)-S-oxide-[protein] + [thioredoxin]-dithiol</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[thioredoxin]-disulfide + L-methionine + H2O = L-methionine (S)-S-oxide + [thioredoxin]-dithiol</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the MsrA Met sulfoxide reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001586">
        <property type="protein sequence ID" value="MES1921649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="entry name" value="Peptide methionine sulphoxide reductase MsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050162">
        <property type="entry name" value="MsrA_MetSO_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42799">
        <property type="entry name" value="MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42799:SF2">
        <property type="entry name" value="MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="Peptide methionine sulfoxide reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptide methionine sulphoxide reductase MsrA" evidence="8">
        <location>
            <begin position="10"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00030273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13837" checksum="637E92F69D375F88" modified="2025-10-08" version="1">MRQRSITNQKVVFDSEVVSFAELCELFFELHDPTTLNRQKNDIGSQYRSIAFYRNKEQKTEIKGIIEKISKSYRKPVVTEVKKMNKFWLAEDYHQKYLEKKGQSAKKGEDTCIKCYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR4</accession>
    <name>A0ABV2APR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001588">
        <property type="protein sequence ID" value="MES1921650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045924639" evidence="1">
        <location>
            <begin position="18"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8359" checksum="20204B434163A576" modified="2025-10-08" version="1">MFLPIILSFSLLPKVWRLKTDESKLSISGPTKLRRLANIFATCIWAKTDFGIFEKLLSFLDQITTTNSSFSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS5</accession>
    <name>A0ABV2APS5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001255">
        <property type="protein sequence ID" value="MES1921337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="7860" checksum="10454A753B8DE8DB" modified="2025-10-08" version="1" fragment="single">VVRNLNSNKSYSTAEVSLPNLAKAKEIADRLNGLIVNNEPVMLSVITERTNRENSHTKPVRVQLQKNAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ4</accession>
    <name>A0ABV2APZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SWIM-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003278</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001711">
        <property type="protein sequence ID" value="MES1921748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04434">
        <property type="entry name" value="SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="3">
        <location>
            <begin position="13"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="209"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="31670" checksum="663E69F02440AACD" modified="2025-10-08" version="1" fragment="single">CEKICSKISKTSFEVYSNRKIDQIRINEIVKGKPGNPQQCTCRFGKILKNLCTHKLATYLKTGTSLRKLPENYFGGNFYENSFETKNANFRNSFFRQQQNIKKGRPNFNTKQKNKQVKINQKRTNLNSKNRKNNFKDDQNLVKCHFEEKNQKGKFESFDKFIENNRKETNFRLNGKKNLAKNDQKIKNLDKNNQNLAKNNQKNKKNLDKSNQNLNKNNRNLAKKEEIIKMTKNNQNLVEKEEIIKMTKNNQNLVKNEEIIKVTKNNQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ04</accession>
    <name>A0ABV2AQ04_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GDP-mannose 4,6-dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003062</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.47" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001458">
        <property type="protein sequence ID" value="MES1921536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.25.10">
        <property type="entry name" value="UDP-galactose 4-epimerase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006368">
        <property type="entry name" value="GDP_Man_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43715:SF1">
        <property type="entry name" value="GDP-MANNOSE 4,6 DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43715">
        <property type="entry name" value="GDP-MANNOSE 4,6-DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-binding" evidence="5">
        <location>
            <begin position="1"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20812" checksum="99A12068A2441433" modified="2025-10-08" version="1">MFGDVTEEIQNENTRFRPQSPYGFVFQTKIIVTTTNNKAIAKVFAYWTAINFRESYGMHISNGILFNHESPRRGENFVTRKITMGVASIKLNLKKCIYLGNLDAKRDWGHAKDYVEAMYKILQQNQPSDYVIATGIVRSVRYFTEKAFSVVGIDICWRGEKLNEEGFDKKNKSFKICKNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ68</accession>
    <name>A0ABV2AQ68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001630">
        <property type="protein sequence ID" value="MES1921684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11442" checksum="3850F6016D79367B" modified="2025-10-08" version="1">MKTPQSSNCDQIQGLDGCGIAIKKSNWREVYTLRVQHSDASVNYRKTLVHRVQLHTLSMESHPVWSDITLREVQVRYRLDIFSINILLLRSIQEHLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQB6</accession>
    <name>A0ABV2AQB6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">valine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Valyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_003137</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.9" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001545">
        <property type="protein sequence ID" value="MES1921608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07962">
        <property type="entry name" value="Anticodon_Ia_Val"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.730.10">
        <property type="entry name" value="Isoleucyl-tRNA Synthetase, Domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033705">
        <property type="entry name" value="Anticodon_Ia_Val"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002303">
        <property type="entry name" value="Valyl-tRNA_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11946:SF109">
        <property type="entry name" value="VALINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11946">
        <property type="entry name" value="VALYL-TRNA SYNTHETASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding" evidence="10">
        <location>
            <begin position="24"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="236"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="311" mass="36201" checksum="DEB6C82F52F0CFED" modified="2025-10-08" version="1" fragment="single">LKENKEHLKTKLSKDLVKFLSLEDKWILTKLYNTEKQINQNFSTFDLNAAALRIYDFWLKELCDVYLELTKAIFYSENENKKYSSKVLFFVIERALKLFHPFMPFLTEELYQRLNLLTNFSQNLESIMLSQFPLPNEKFVFRETEEKMELAFLIVKSIRSSRMAFELGNKQLEKVFIKTAKNIKTLREAEQVISVLGKVANVEVVDSDFDDGTNFRDCSNDIVTSDITVHLQLSNMIDVDKQLEKMTKRKKKVEIQLEALEKKASVVCSDGAKKVPEKIKIEILEKVEDKKKELAKMAESCKKLAKIKSGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC0</accession>
    <name>A0ABV2AQC0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Eukaryotic translation initiation factor 4E</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic initiation factor 4E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001872">
        <property type="protein sequence ID" value="MES1921865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.760.10">
        <property type="entry name" value="RNA Cap, Translation Initiation Factor Eif4e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023398">
        <property type="entry name" value="TIF_eIF4e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001040">
        <property type="entry name" value="TIF_eIF_4E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960:SF18">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E HOMOLOGOUS PROTEIN, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01652">
        <property type="entry name" value="IF4E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55418">
        <property type="entry name" value="eIF4e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="154" mass="17934" checksum="675D6378404DA1C6" modified="2025-10-08" version="1">MNISNKNTDHKLSQKWSFWCIKSDSISFDDFGKNLLRIGSFDTVEDFWTIYTHIKNPDSIINNHDIFLFKENVKPMWEDPANEKGGHWTFMLKKNKRISECWEKLVMAVVGGQFESNGDLCGISLAMKKKDEVSFSIWHGDASNQVEKYLMRFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE8</accession>
    <name>A0ABV2AQE8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminopeptidase N-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001904">
        <property type="protein sequence ID" value="MES1921889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1730">
        <property type="entry name" value="tricorn interacting facor f3 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045357">
        <property type="entry name" value="Aminopeptidase_N-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042097">
        <property type="entry name" value="Aminopeptidase_N-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001930">
        <property type="entry name" value="Peptidase_M1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050344">
        <property type="entry name" value="Peptidase_M1_aminopeptidases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533">
        <property type="entry name" value="PROTEASE M1 ZINC METALLOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533:SF174">
        <property type="entry name" value="PUROMYCIN-SENSITIVE AMINOPEPTIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17900">
        <property type="entry name" value="Peptidase_M1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00756">
        <property type="entry name" value="ALADIPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63737">
        <property type="entry name" value="Leukotriene A4 hydrolase N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminopeptidase N-like N-terminal" evidence="1">
        <location>
            <begin position="23"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="23735" checksum="38A57F714E181262" modified="2025-10-08" version="1" fragment="single">MTVKILQALTKKSRILLPKNISPKHYNLSLTPNMTDFTFLGSVKIDLDVKEESDSIVFHAQDLDFKSILLRQKGLEKKIDVGKVSIDKKKTTAKIPVRVEKGVAKLDIKYSGEINDQMKGFYRSNYVKDGKTNFVGCTQFEAIDARRALPCWDEPSHKSTFELSIKVDKKYTVLSNTELVSETEGEDGLKESCFAVTPKMSTYLLAWFIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU2</accession>
    <name>A0ABV2AQU2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003319</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001762">
        <property type="protein sequence ID" value="MES1921788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22309" checksum="B5764EFCE495EAF0" modified="2025-10-08" version="1" fragment="single">MRFPKSALLALIVYMIIRSSQKFGFVIPFILFVLIIIVFVYFSNPKKSDNLDLIHLIDDISSSPNTINSNFPKWLTYKGHEKTHFLNYSFRVMWNPKLKNCFEKSVFPFIERKLEQKKISVVRLDLGTTSPIVKYINIGNTNCAQCGKHKCTRKKCEDLSCSIVVEIYFESDDAEIDVSTEYKTAKTNLCLTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR95</accession>
    <name>A0ABV2AR95_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Kinetochore protein Spc24</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003451</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the NDC80 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
            <location evidence="1">Centromere</location>
            <location evidence="1">Kinetochore</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the SPC24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001944">
        <property type="protein sequence ID" value="MES1921923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013252">
        <property type="entry name" value="Ndc80_Spc24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08286">
        <property type="entry name" value="Spc24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="1" id="KW-0137">Centromere</keyword>
    <keyword evidence="1" id="KW-0158">Chromosome</keyword>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0995">Kinetochore</keyword>
    <keyword evidence="1" id="KW-0498">Mitosis</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="48"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU368011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22781" checksum="34A32169995939AE" modified="2025-10-08" version="1">MSDLSLKQSIDLMRQIRLSLKDTSEFEEISERYLTAQKMSYINRYKHYEVLEKAIKRLQDENNQLKNNLNSKKIKKPSNQKIDLRKEKNNLIENIKNLKTQIENQKLTLSEYEQKTAEIDSETKKFKNYINKNVPTSINKLNLYDNIANIKLVEMNNDKHIHIIEKNGSTNSKILFDESGFEITQKLWNEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL2</accession>
    <name>A0ABV2ARL2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003818</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002566">
        <property type="protein sequence ID" value="MES1922311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="16"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="31708" checksum="19FCFA56CD16B8C4" modified="2025-10-08" version="1" fragment="single">SNTVVQTVKILKDFEKFHALLKILGENYYKGQILIFTDRQEAVDKLFTDLQKAGYYSLTLHGGMDQSDRDSMILDFKNKTRNILIATSIAARGLDVKDLNLVINYTVPNHYEDYIHRIGRTGRAGHRGYSISFITPEESRFAPDLLKALKLSKQSRIPQRLIDMAEEFKGKVERGEEKFTPSVRSSGSKGFKFDESEEFQQKLDRQRQEAVYGTSVDKNMTKDELLKRNAELANSTKRKNREKAQIVTALDKQSFYNQRLFQHLFNSLLKFCEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX3</accession>
    <name>A0ABV2ARX3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA-dependent RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003926</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RdRP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.48" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002753">
        <property type="protein sequence ID" value="MES1922415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007855">
        <property type="entry name" value="RDRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057596">
        <property type="entry name" value="RDRP_core"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079">
        <property type="entry name" value="RNA-DEPENDENT RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079:SF55">
        <property type="entry name" value="RNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05183">
        <property type="entry name" value="RdRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RDRP core" evidence="2">
        <location>
            <begin position="1"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="28618" checksum="711670745343B194" modified="2025-10-08" version="1" fragment="single">MIHQLGDFSLIPDTQKRSKRIGLLFSSLRIGFEIEHLQWEKIPDIKSNGFNFTDGCGFVSADIISKACKILEDNKKIVETMPSVIQVRFLGFKGILLLKKSLHNKIQFRESMLKFNVFEGKHDKNFLGIVNYSTPFHLTYLSLQSVMLLSALGVKDETFYDLQTDYFAKIGVLLESPLVAYNFCRLRDRELMRLIEKYGFSKVVINRLRVLRRKELERGIKKIKRASKNRLEAERLRIFVPKGRLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS10</accession>
    <name>A0ABV2AS10_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003749</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002456">
        <property type="protein sequence ID" value="MES1922241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="PPR" evidence="1">
        <location>
            <begin position="9"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="204" mass="24093" checksum="C4FDFA00A3783164" modified="2025-10-08" version="1">MCKSKIKPNVESYNSLLLATSQMGNLDVTIAVLELMDKHGIAKNFYSYQRMIQCIRKTLKTPNLSLEGRDTTKQERIDMAVQLFSEMNDKDLCDDRRKAEIITKEIFLVYQNSFALKRCLAFVENLNEDDNAELYQELCLRAFRKTLNCRKVEYCFEYLKKIKKLSLKEYVYFVKLRAQNLFHKFQGTEIFDVRDGETGRQNFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS42</accession>
    <name>A0ABV2AS42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004003</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002924">
        <property type="protein sequence ID" value="MES1922485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="11874" checksum="7EF3A38077DF9CA7" modified="2025-10-08" version="1">MLSAKKRKKNTQAATPLSPPAEERAFTWGLGNYLPDPPSSEDDASIDIHIQSLQREFRKTSADVNVEMVDQKMTLAFAQRGKLVVTDKLDFKNLIDISLGYSFVVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS44</accession>
    <name>A0ABV2AS44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Peptidase S54 rhomboid domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004001</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase S54 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002922">
        <property type="protein sequence ID" value="MES1922483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050925">
        <property type="entry name" value="Rhomboid_protease_S54"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43731:SF14">
        <property type="entry name" value="PRESENILIN-ASSOCIATED RHOMBOID-LIKE PROTEIN, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43731">
        <property type="entry name" value="RHOMBOID PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S54 rhomboid" evidence="8">
        <location>
            <begin position="119"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21564" checksum="0FF4825B4D57FC30" modified="2025-10-08" version="1">MRLTKFAKHFKNPNKFAPKFRKFGFFAKTSLFFGSAFILSDWIRNPFVEYSKFNNRFKNDEESKKIFFEHSAVPFLGAIIGINVFVHCFWQFSKIYKPLEKIMVKHFTLQSHVFARNPHTLITHMFSHHSVLHLLVNIVCLTSFSNVLLPAIGVSDFAKIYFGFGNFFDKNYVCVSELLNFVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS99</accession>
    <name>A0ABV2AS99_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003072">
        <property type="protein sequence ID" value="MES1922550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6502" checksum="CE0E8C460607D0D1" modified="2025-10-08" version="1">MYKAKLCQNSLLETGNECVSENNFRIFLSNGNVYSILNDICSDCINTIVHVTIMMILG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD1</accession>
    <name>A0ABV2ASD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ubiquitin-conjugating enzyme E2 N</fullName>
            <ecNumber evidence="6">2.3.2.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UBE2N</name>
        <name evidence="6" type="ORF">MHBO_004095</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.23" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010003143">
        <property type="protein sequence ID" value="MES1922581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061631">
        <property type="term" value="F:ubiquitin conjugating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24068">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="2 4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="5">
        <location>
            <begin position="2"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="3">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18888" checksum="91883989B82C5A83" modified="2025-10-08" version="1">MSLSKRIILELKKIQKEPSFISKLTIFKVPNFMLKQDKHNDRYFFLEMDGPIESPYHGYIFKLELFLPEGYPIKPPKIRFLTKIYHPNIDRIGRICLDILKDRWTPILQLRTVCLSISILLQNPNIEDPLSPEIAEKWKSNPEKAMKTATEWARIHAVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH8</accession>
    <name>A0ABV2ASH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003864</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002650">
        <property type="protein sequence ID" value="MES1922358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12638" checksum="A85B7103A57AADC2" modified="2025-10-08" version="1">MLKREKCDKKIDWWGVGLLGYFMASKKHPFLENNRLTNEEETIERIKKYNPIYPNHFTQNFIRLLSHLLKKNPEQRLSLERNNIEEIANCFRFLKGVNWDELDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI8</accession>
    <name>A0ABV2ASI8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">SLC1A2</name>
        <name evidence="7" type="ORF">MHBO_003919</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002738">
        <property type="protein sequence ID" value="MES1922406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050746">
        <property type="entry name" value="DAACS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958:SF63">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958">
        <property type="entry name" value="SODIUM/DICARBOXYLATE SYMPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="25"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="50"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14179" checksum="25CEB3AE2EFF6044" modified="2025-10-08" version="1">MNGSSLYYPITIIFISFMYKKSIDWGTQFLMCFITAFVTVGNAPIPSGSFVYLLLVGNAVGIHLPAEAVSLIFAVDPIMDRIITATNVCGDSFAVAIIEVLNKRLNKRRKVKENVENNEKSSTEKPEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN8</accession>
    <name>A0ABV2ASN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003357">
        <property type="protein sequence ID" value="MES1922662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="10"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="79"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25426" checksum="EB8088F57CC5B854" modified="2025-10-08" version="1">MGDSKEDRVVPSSTVSSDETSSLESISPERLTKKRKYSSSETDDITIVTDSSESHDERPKICRITSDVSDRSVDGVTTSGSELRSSSESPILDMEIPSKTSDWDDHVFPNLRIEVIPEVSAPYVVFSSYSDFLESQKHKRSKIIAMMNDYESLGERKIVLDCYKYAMEHIIDFEYEHIDHIPVHRVEELYESTKTLDKTLLRDWMKQSAGSDLKAGTKEKCKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT16</accession>
    <name>A0ABV2AT16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004052</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003050">
        <property type="protein sequence ID" value="MES1922538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23921" checksum="EF79896AFA3AB795" modified="2025-10-08" version="1" fragment="single">SVLAFDRLKENLVLVKNFEENKNLNYFWKLVPIRKKVTKEKIFFFDDIFLQSSTDNNEKILSVSDDGNISALKSPKNSIFCLTNPNFCYKSKIDFCERKSTLNKKLIDFAKPGEISQQKTDFVEEILYCLVGVLNGQFFNLKFIENNFNILFFDQKSESPKNGQIEKFYNILADAIFLKNFCSERSKTQYGQISKSFSGAIQLILF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT20</accession>
    <name>A0ABV2AT20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004347</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003817">
        <property type="protein sequence ID" value="MES1922821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="12815" checksum="305E80E38867AA40" modified="2025-10-08" version="1">MERDGQTNLQFQLTVPFGCVFKNPQDDIPIPCFLEVRMVVPKSSCSGQGISGIEKCGVSVKSTEWNMTQTLTIKHKNTLDYEITEKYYVFLNASAPSTTGKYWGNARLSGIEVSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT37</accession>
    <name>A0ABV2AT37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional adapter 2-alpha</fullName>
            <ecNumber evidence="3">1.13.11.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TADA2A</name>
        <name evidence="3" type="ORF">MHBO_004361</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.27" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010003843">
        <property type="protein sequence ID" value="MES1922833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003868">
        <property type="term" value="F:4-hydroxyphenylpyruvate dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055141">
        <property type="entry name" value="TADA2A_B-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12374:SF20">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTER 2-ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12374">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22941">
        <property type="entry name" value="TADA2A-like_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcriptional adapter 2-alpha/beta-like" evidence="2">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="120"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF22941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="27015" checksum="CC30226F7C159B63" modified="2025-10-08" version="1">MLSDMSFNDNDTEKERTLKLKVIAIYNKKLAERRERKEFLIKRGVHSVIPKNKRKLSPEEKEIHINMRPFARFHSAENHEKLVNGLCNELRIRKRIEELQNYRLNGIRTFAEITSLENQKNQKKTLKPQTTLTRKRGYSESNDSENKNFELDEVEESLCESLGLEKQDYTKIKEAIERETFIKGMIDKNDEEALITIKIHKTLQQMNFFISKDWDFKGERVKPKEKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL2</accession>
    <name>A0ABV2ATL2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004527</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004280">
        <property type="protein sequence ID" value="MES1922995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="10540" checksum="0DAA4FA3A9689F11" modified="2025-10-08" version="1">MVIILNSFYQNNQFGIDDAKQILYEEIKNIYSSKILQNENEFKKMLNFFNGENEIRKSIDKIEILELNVFHSSCRLLSKLFFENLIEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV1</accession>
    <name>A0ABV2ATV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004330</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003782">
        <property type="protein sequence ID" value="MES1922807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16250" checksum="594A3B585B104B2B" modified="2025-10-08" version="1">MIAGLGDMTGFMQSLDVFEKSKVLGKHFTFEWDFNLETHDPLHINWDPIPEIIAKQKEENSKGKLQIIFLGIVVLRDEESKKTWGINKAWWKPEIKSISNGESWTTLKSALECLDYKVEVDENLLITKVSNKLVDDSQIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW2</accession>
    <name>A0ABV2ATW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004082">
        <property type="protein sequence ID" value="MES1922934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="10075" checksum="90B2B8993EECF8DC" modified="2025-10-08" version="1">MLSGIRLLKKYIKLNKSNPEMNKVAITKLKKLAKEIKNPFFGKNIKEITKLMESNLIQNDKNLIKKDFENDDSFGDDLKELEIHRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY7</accession>
    <name>A0ABV2ATY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">T-complex protein 1 subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CCT2</name>
        <name evidence="7" type="ORF">MHBO_004633</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004634">
        <property type="protein sequence ID" value="MES1923094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00750">
        <property type="entry name" value="TCP1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00751">
        <property type="entry name" value="TCP1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00995">
        <property type="entry name" value="TCP1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="17005" checksum="ED6E9DC17002BC70" modified="2025-10-08" version="1" fragment="single">MMQQQGQLKPTILKESQGASEETGENARISKFVGATAVSDLIKTTLGPKGMDKILQSIDENGIPSKKVTVTNDGATILKSVNLDNAAAKVLVEISKTQDDDVGDGTTSVVVLAGELLKRAEQLIAQKVHPQIIMRGWRLAYNQAKSTLKNSAVLYKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI8</accession>
    <name>A0ABV2AUI8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004906</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005715">
        <property type="protein sequence ID" value="MES1923343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="20126" checksum="C54DE8CDA1F186A4" modified="2025-10-08" version="1" fragment="single">KATTSSYTATFNGYNSFNGEGFCNLNEVADGENDFTWYTSPFYDSYKEFGDTPVSFIGADGSASATGVATDLLNVGDLLATPTLVDMTTELNVDGSDIVEGNPYKYVKVGTGAKFNRGKAIISSLGSSYGIDEASTYSCGLDGNGKLTNYQILPGKFNTSAFLATVLETETCYFIQRDGMVIAKPGTKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN4</accession>
    <name>A0ABV2AUN4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glutaredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004686</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004875">
        <property type="protein sequence ID" value="MES1923141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="1">
        <location>
            <begin position="27"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8770" checksum="440196DA6E356B64" modified="2025-10-08" version="1">MGLREEVEEFLRSEPVILLLESNKNNKRVLDLIDSEGIVFEEFDVDQDEAIKNIFTEISKTANFPQRLAFTDFDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV9</accession>
    <name>A0ABV2AUV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004727</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005028">
        <property type="protein sequence ID" value="MES1923182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="17457" checksum="29AB4661F0D234D6" modified="2025-10-08" version="1">MSHDICSTLHKCNCQSITNFSKNICFRKNHKSNTCTITDMCIDISISSNHGCNGNSISYFGINICISSKHQCSTYSIANMCKDISHGDLCFFWRSKHNSQCWSITYFCHNISKSKHNCTSDSITDMSKDIPCTQHCCNRNSIPYFSKNIPCSNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX3</accession>
    <name>A0ABV2AUX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005034</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006299">
        <property type="protein sequence ID" value="MES1923460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14704" checksum="808AD2071B7BF557" modified="2025-10-08" version="1" fragment="single">MLRILKTIYGLDEDLLEKWRDDHEKDYISLLHLFEDLKKEMNAHTDEKKVFTANIPNSLYKIATQNGASNQTIKEHTKTVNGIVSTDGECEFGIEHTFLEEYFRKIEQKVLVEIENADEDLKNVNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY6</accession>
    <name>A0ABV2AUY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">peptidylprolyl isomerase</fullName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">PPIL4</name>
        <name evidence="9" type="ORF">MHBO_005056</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010006389">
        <property type="protein sequence ID" value="MES1923478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd12235">
        <property type="entry name" value="RRM_PPIL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035542">
        <property type="entry name" value="CRIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45843">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45843:SF1">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="RRM" evidence="8">
        <location>
            <begin position="63"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18321" checksum="4CA549BA83ACF8F4" modified="2025-10-08" version="1" fragment="single">SPKITYDKLDENYIPDDIDLSKTDNRSKAEIDRLKMTERAKADSTLLEVLRDIPHRDIRPDENTLFICKLNPVTTDEDLRTIFSQFGPVAGCEVVKDYKTGDSLQYAFVEFEKQSHCEMAFLKMNNVLLDDRRIKVDWSQSVAKQWERFEREGLANK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV19</accession>
    <name>A0ABV2AV19_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Mitochondrial carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_004787</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005257">
        <property type="protein sequence ID" value="MES1923242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45667">
        <property type="entry name" value="S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 8 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="120"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="59"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1923242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="151" mass="17097" checksum="6DD3E7DDAA4F48C9" modified="2025-10-08" version="1">MQLGMHKTTINAIFDIKRKNGFKGFYNGYWTTVLREIPFDAIQFITFEIMKNKMTNKNTNTVIFLPIGAISGVIAGFITNPIDVVKTRIMTQPFSSKDKNYISTPTKMAKLVYKNEGYRAFLGGAGVRVVWIGLGGGVFFYVNETCRRLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB0</accession>
    <name>A0ABV2AVB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005201</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007109">
        <property type="protein sequence ID" value="MES1923600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015505">
        <property type="entry name" value="Coronin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10856">
        <property type="entry name" value="CORONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10856:SF0">
        <property type="entry name" value="CORONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16300">
        <property type="entry name" value="WD40_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01167">
        <property type="entry name" value="DUF1900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10553" checksum="89403F724FB6A057" modified="2025-10-08" version="1" fragment="single">GKGDCGIRAFELSEQEGFCHFVTELKMMHPQKGVAVIPRRRLDTSKCEIFKALRLKSSSIEPVSIMVPRRNSVNVFQEDIYPDCISGKPAISID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE0</accession>
    <name>A0ABV2AVE0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Squalene epoxidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005257</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007378">
        <property type="protein sequence ID" value="MES1923640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013698">
        <property type="entry name" value="Squalene_epoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08491">
        <property type="entry name" value="SE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Squalene epoxidase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7028" checksum="D6326DD4242B466D" modified="2025-10-08" version="1" fragment="single">KVREQVNKFLTIRKKENATLNILATALHAVINAQNIDLVKAYIEYTKAGEYRIKGPMRLLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVJ5</accession>
    <name>A0ABV2AVJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004959</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005967">
        <property type="protein sequence ID" value="MES1923393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="18582" checksum="488AF2A66DB4EB46" modified="2025-10-08" version="1" fragment="single">YQKTGSGPSVHPSAVKVHIGTGDDYPADFTSETGEFSPHQDMTITGLNLAPKKVWVAVPNSMKSKVAGISANDGLPAQWASQRATINVESLKMSNRTGITEITAPIAAGSPETPLAVHFSNESQGGLKFFADAAAMNAFKAKFAVRCFQSVAYVTKGENDYPSLYAWTGKNPAGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVQ2</accession>
    <name>A0ABV2AVQ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006261">
        <property type="protein sequence ID" value="MES1923452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19137" checksum="1F9A978A4B8D1566" modified="2025-10-08" version="1">MLQNFYLAKNQHIKNDRGFEEHDIKLIQNPDLKDKELEEYLRTVLDSNRLNLQNIELNDKNVFLEGLEDWIFFKLFVEDKVNDTTITFYPGRGASSLAPEISSCIAYSKNYIIIVDNDKGGKNAKTHYESKECFSYTDIDKRIKMIADIVGDKSIKTTTSLLSAND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEB1</accession>
    <name>A0ABV2AEB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03999">
        <property type="entry name" value="MAP65_ASE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="194"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="121"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="204"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="25003" checksum="A041F05E9DF4CE47" modified="2025-10-08" version="1">MFTSMRIPQENRLQLLEETKFKSKKEEYSSLVKLHLKLEELATVSSKISRLMNRRASVIALRSKLDDKNPNRFKIPGRLIKEERIRNKVANLPKLTEQIKRLVGEFESVCGQDFLWKGKPLREIILEFERAEREAQERERVELEQRRIRRKSGGFKAAFGTPLKKRALKRPQSASVLKIHSKLRKNNDYKKIEKSVETKKHLKQISNTPISLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEH8</accession>
    <name>A0ABV2AEH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SDR family oxidoreductase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000112</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05325">
        <property type="entry name" value="carb_red_sniffer_like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051468">
        <property type="entry name" value="Fungal_SecMetab_SDRs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43544:SF7">
        <property type="entry name" value="NADB-LER2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43544">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE/REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="234" mass="25926" checksum="8BE4A788533B44B9" modified="2025-10-08" version="1">MTLTYFIAGASRGIGFEFVKQLLASSNVVIAGCRNTESLSDLKSKYPKNLHTLTLDVNSDSSIDNAYEDLNSKTKQNLKIDVFVHSAGVDDFTESVFDIKRKTARKVFETNSISPLMVSRKFLDMFNQPASKLIFITSLMSSISDNTHSSGVFYRMSKTALNMLAKCLSIDLKERGVTVLAIHPGWVQTDMGKKGGLPPLTPEQSVKSMINVISSLKPDQTGQFLSWKGDKVEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEW9</accession>
    <name>A0ABV2AEW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000244</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000032">
        <property type="protein sequence ID" value="MES1918246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16381" checksum="D5E50041C6874B00" modified="2025-10-08" version="1">MCLYNNKKTSFTVSVVTLDAYGKIKETHHVIKLNKGTSCDDTGYLEKDLFINICDIKKVCIQWDSFLFKNGEFVLEIDNLLLKRGMYYDSFDSIEERIVENDEIAEEVDYEFEVISPQSTSKSCQLVDNMANMRNICQVYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF10</accession>
    <name>A0ABV2AF10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000258</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000034">
        <property type="protein sequence ID" value="MES1918267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19895" checksum="D6F3AE7963CF41C9" modified="2025-10-08" version="1">MSYGMPWSIRDPSLIEQFFQKYKKFVQRNDSTLNYERLSIVEKGIKSCVDLRFESDKLKEEMVHIAETINLNFSSILSVSEKFSGYQVIQKLGYCRSQVSALLLYVKGLGNRIRVEEQACFKVKAVFEFEKNVDSRLSFTKFEELQKVSEFSQIRGNFYDGFQFVRREN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF34</accession>
    <name>A0ABV2AF34_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mitochondrial inner membrane protease ATP23</fullName>
            <ecNumber evidence="6">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000261</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the peptidase M76 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019165">
        <property type="entry name" value="Peptidase_M76_ATP23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21711">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21711:SF0">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEASE ATP23 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09768">
        <property type="entry name" value="Peptidase_M76"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2 6" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11877" checksum="0ADBDA4107373937" modified="2025-10-08" version="1">MPSETNEKSFKTNLRHELIHAYDTAKGADFKNAYHLLCSELRANSLAGNCLSIKDGVKIENCIVERSLRSVFTAFPEITSVNQIEDFSEIKLRCLKRFGDDFEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF50</accession>
    <name>A0ABV2AF50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000273</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000037">
        <property type="protein sequence ID" value="MES1918286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="454" mass="53458" checksum="57DB992F2DD2E0D1" modified="2025-10-08" version="1">MSTRINNKISLNSQKHLRKSQKKRKLSQEFIFSFSQENIEEDKENMATQKFNKISIDKTQKRNALEDVTNIQNEEISLCRSLDFWFDSDKTNTKTENKFTQNLKNDDLLQVLETDLIPKSNVKISTETNILKLLKYCPQSENRFITNCFEKFHSKNDKTKLKSAMTHWSYRPKITHKNKDNLEDNVLKEWINSLISAYNYQKFSAKATSIYLMSENRTLLFKKCQNQKSATVVLNSVGTLIKQKLKEENIKFFDFRQNCEKENLKNRDLDNFEQNGGKIKRKNFFQTDEKLDLECAVIKGKTDVHSIFDLLLNFTKALFFDLPQIYCNFPFANAKFESLKRKITKTVLKTNKTRYTLQLDGICFPENLAEIAKIIKREDKKSSIKIKSTPFPKSENLNIAILDNFTDPKYEQILTKFDLQKNEVENFIKNGFSKNFAQNRFSEFIEFGERKINF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ0</accession>
    <name>A0ABV2AFJ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein FRA10AC1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019129">
        <property type="entry name" value="Folate-sensitive_fs_Fra10Ac1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09725">
        <property type="entry name" value="Fra10Ac1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="129" mass="15470" checksum="CCDADB63638DCCBB" modified="2025-10-08" version="1">MSKKRKKVTEIDSVKKAYKFLRSDSDDTENEEGWEDRLAKKYEEKLFKEFALIDLKYYKLGKFGLRWRIKKEVLEGKGQFICGNKKCNKKKNLSSFEMNFKYKENNKKQSALVKVRLCKDCSEKLNYKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ5</accession>
    <name>A0ABV2AFJ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000430</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000066">
        <property type="protein sequence ID" value="MES1918465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PROTON/GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865:SF7">
        <property type="entry name" value="PROTON_GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="22136" checksum="8E08F7BF5FA68A34" modified="2025-10-08" version="1">MFGLLGSIYLNFINMIALLLVIILMIENTMRLTGLKNSKAFVITTMVVFIVTSTLANVASVLVVDFGINIMGDLKTSVTDANNAKYGQLHKIISNLVSNILPSNFFGALIKNNMLASMIYSVVFGYFITKFKSKKSFSTIASLVILIKDSMESMIKIVVFSTPVCMFSMICAQIAMLNNLEIFLHVKNFILVFLTGYFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ1</accession>
    <name>A0ABV2AFQ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000462</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000072">
        <property type="protein sequence ID" value="MES1918498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="76" mass="9167" checksum="9DF7AC95DB3CBA8E" modified="2025-10-08" version="1" fragment="single">PFQNSVYEDAHWYTPLRIKNTSKNIIGIFPRNRLFQKLFNNRLYLSKTFFSRLPFNPIADDFPIPKFIKLMSEIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR3</accession>
    <name>A0ABV2AFR3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Exocyst complex component Sec6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000490</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus</location>
            <location evidence="1">trans-Golgi network</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VPS52 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000077">
        <property type="protein sequence ID" value="MES1918530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007258">
        <property type="entry name" value="Vps52"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048361">
        <property type="entry name" value="Vps52_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048319">
        <property type="entry name" value="Vps52_CC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14190">
        <property type="entry name" value="SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14190:SF7">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20655">
        <property type="entry name" value="Vps52_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04129">
        <property type="entry name" value="Vps52_CC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Vps52 coiled-coil" evidence="7">
        <location>
            <begin position="63"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="Vps52 C-terminal" evidence="8">
        <location>
            <begin position="238"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="64"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF20655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="635" mass="74474" checksum="4F9F9B3D9BA41F15" modified="2025-10-08" version="1">MAENNEKNQTDLNVNSIDDETLANFEVLAKENPVLYMDKETTDFLEKFKKGTIDIAGENHIANSKNYLTELDNLKNNINDIQTIALDFKEKINKIKDGIKKLQIDSFNLNEEIKKSKVCVKNSKSDKSGLRNFVNSIFVDTKTIHNICVSDIDENYIENILLLNKKLEKLVDESLIKSEAVKDMQKIVLELRDEAVLRIERFLNGKISRMGNQNVNVQINQQSLAKYSELVKFLNKWDKIKFENVKKNYVNTVQNKYRKIFSGFLDKIKIEKTEKLKLNFANRFSDFSAKERIKILGPFKTISSSRFIMKKDKYLIEEFFANINGLLLDLSLSEYNFIEKFFSVAELYSDIFKDIFDDIKKFFDRKIKLFDIFGVIICVRLNQQNLKWSENLKHLENFYWSLNDLLWPNVKNMFEEFVENSAEMFPRNEREAVSISTQLKMFIESVGALNEEHEDHILELWSEKLIDKTMVNWLNSNDENSKIAAIICSDKFINQINNQNDKIVIKLGKEIDSSLMRKSEIDLEKFKLFKEMDEKYGEFEKRALKSDQTKSAQTIKFLQKCVQNFSKEWQIFITTNHKNIEEQFSNSQALQNRAKSVLIRKLLKKYAKIEEIASHLKFDDISSLTKIKNECSKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW3</accession>
    <name>A0ABV2AFW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000087">
        <property type="protein sequence ID" value="MES1918574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357133" evidence="1">
        <location>
            <begin position="23"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="414" mass="47682" checksum="F55D074F487C88F1" modified="2025-10-08" version="1">MALILFLGQIFMFVCLITSCDESKIQRKKVFVSKGDNVTEAGSPFVIFIAFVNECGSAFKFKGETPDYIKIHPKIISKPDSAKITGHRLNYTKSGNFSVSFDFTKSGFYRMGVKIQVFDYSLDTAYNTFVTPGRADYKRIFVTKKVFLMEEGSVIRLKVSNCSQNLHNVFNVTMLDSHGNRVASKECNRLEIDTKWKSFENVTISPRKDSNANFVCCVSVCSSSSGLKTLKLWFHTKIGRKSIVDLKINFLPLKMYFYKSFAELKRNRNEYIEFDVRLRDKFGNPAENDMHMTFNVTEQCEDVIYSRSSVVQRLTVYREGPGRVVRFYSDFADRRCINHFIALRIRREDKMTAAFTKWRLSSFVVDRVNDHTMETLNFVGIPLYDSVKYTKIHFELDVGETKSGKGTVIKSTFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD3</accession>
    <name>A0ABV2AGD3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">ATP synthase gamma subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000492</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATPase gamma chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000078">
        <property type="protein sequence ID" value="MES1918534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.80">
        <property type="entry name" value="ATP synthase, gamma subunit, helix hairpin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035968">
        <property type="entry name" value="ATP_synth_F1_ATPase_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000131">
        <property type="entry name" value="ATP_synth_F1_gsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11693">
        <property type="entry name" value="ATP SYNTHASE GAMMA CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11693:SF22">
        <property type="entry name" value="ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00231">
        <property type="entry name" value="ATP-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00126">
        <property type="entry name" value="ATPASEGAMMA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52943">
        <property type="entry name" value="ATP synthase (F1-ATPase), gamma subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="7" id="KW-0139">CF(1)</keyword>
    <keyword evidence="4" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="307" mass="35499" checksum="2B2F4748CD01F2CE" modified="2025-10-08" version="1">MLSIRRKSTIRKLNGHINKYFGRNFAESVSQLRDRIAAIGKIKKVCETMRNISAARMPRLEQFCLSSRSFCDIIEPIWKNDKEFNDSNNNLFLIVSTNLGMCGNNNTSLGKHFKQYHIDNNIPEEQKTILLGSRGTNIIESTKFGKAVTIVKALHEMETFSIDCAFELTENLIFPQKFDRFVIFYNYMNSKLTFTTKKIIFPSFDIILKNKEHLDHYELPSSMEDIDHLRNLYEISIAVALYKAVSEGLAVEQLMRFNSMQSATKNIEDILIDMKRTYNSKRQEQITTEICEINAGRMAVMLAMEDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP8</accession>
    <name>A0ABV2AGP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000516</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000085">
        <property type="protein sequence ID" value="MES1918563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="68"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="19076" checksum="B7F10830986A6AF8" modified="2025-10-08" version="1">MDEEIKKAKSHFAENILKEEHVNISSGVKLYTKEVIDFATSNNFDPFKLVEKDLGKEIKLFIESALRVKALDQSLEEIKEEKAKIVENVRICEEKTRILELQIRERKVLAALRKAKKMGHEKENLDNWDEDQFEKFEKKWRLRFDYLDSKTALLPIWNYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH12</accession>
    <name>A0ABV2AH12_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphatidate cytidylyltransferase, mitochondrial</fullName>
            <ecNumber evidence="6">2.7.7.41</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18">CDP-diacylglycerol synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">MHBO_000664</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Lipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Phospholipid metabolism; CDP-diacylglycerol biosynthesis; CDP-diacylglycerol from sn-glycerol 3-phosphate: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TAM41 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="19">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.41" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000117">
        <property type="protein sequence ID" value="MES1918749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015222">
        <property type="entry name" value="Tam41"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13619">
        <property type="entry name" value="PHOSPHATIDATE CYTIDYLYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13619:SF0">
        <property type="entry name" value="PHOSPHATIDATE CYTIDYLYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09139">
        <property type="entry name" value="Tam41_Mmp37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="11" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="16" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="17" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00029893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="MES1918749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="19734" checksum="FFFD9D2DE5F3FE37" modified="2025-10-08" version="1">MCLKNLGDLRLYFAEDRKKTQLIANGSFQDFVHLYKKQICGYLKFLDSTNLSNLDKNLHVERKTKPSLNLSKNWPRKFRIIAEDKNLNLEEKRNLVLTKLAKTVRKSSFVQALSNFATCNFSDSHRYIDEKLNKYFSYHIQFYKKCFFYIWPFQIKNNSQNNKII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL3</accession>
    <name>A0ABV2AHL3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein ENHANCED DISEASE RESISTANCE 2 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001031</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000214">
        <property type="protein sequence ID" value="MES1919166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009769">
        <property type="entry name" value="EDR2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31558">
        <property type="entry name" value="CW14 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31558:SF3">
        <property type="entry name" value="CW14 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07059">
        <property type="entry name" value="EDR2_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein ENHANCED DISEASE RESISTANCE 2 C-terminal" evidence="1">
        <location>
            <begin position="24"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="Protein ENHANCED DISEASE RESISTANCE 2 C-terminal" evidence="1">
        <location>
            <begin position="145"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="351" mass="39993" checksum="83F3B620FFFD86C8" modified="2025-10-08" version="1">MKKIRHPGKYPLYDAENNINDECWDQIDSQSFKVRAGKNYKSNGLKQKSKDAFYKTVAVDIFNSEKGLKNFGALIDFDYLDRKFEEENSKFAPKDIKGKPLSHSNITNAADDAIKRSISSNQEIGDSSSRDFKISKSFFSEANINLATEPNSNLKLTAKPTAKMKLPTWFVISITVPLEAKSFLGSKKDEKSNVCVLYGQIQHKIIEKAEREKNPSLILLKHFVFNQETLTSPDLPIRKRFKVIAKTLNAETINFPKIVRSLLKKFNGKPFLARTSSSFFLGESYFEVNVDMNKFGYLSQTGLSGIRPYLQSFDFGFGFVVQSETDEEMPEQIIMCVKFIKIKLSEKMCKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL4</accession>
    <name>A0ABV2AHL4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001051</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000221">
        <property type="protein sequence ID" value="MES1919188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="6">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10773" checksum="46C2F73F2EF57370" modified="2025-10-08" version="1">MVKTAQKLKKKKIDTKSYSELARLTIGPWSQYVITFLIVMMMVFAMSIYVILLRLQTKSLIEDFSGKIFDKDKLVLLAIIAPVFLLCVPRVFAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN2</accession>
    <name>A0ABV2AHN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000829</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000162">
        <property type="protein sequence ID" value="MES1918944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8225" checksum="6718FC2B2BAF7CB2" modified="2025-10-08" version="1">MLDMWETLCDLLHKTGKRIDEWGFGDRKKTVKDMTKTTFEAIEEALGKKFKSVDKKRCSTLADLIFAELIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN5</accession>
    <name>A0ABV2AHN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000987</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000204">
        <property type="protein sequence ID" value="MES1919122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16950" checksum="FC5A55740794DBDC" modified="2025-10-08" version="1">MLILRKLQSNKTRSSVLSRAYKKTNSHNKLKAPKNVDRNRSPKSELLVNNKIYAKKKKRIIVDAKSEKSESENSFIIPNGNWDKREKLFFFAVCNSGIEAIAKKEIESIPFLSRTHRVSFSKICYSDCSANILHKIIKNCYIENISD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ0</accession>
    <name>A0ABV2AHQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Small nuclear ribonucleoprotein Sm D2</fullName>
            <shortName evidence="9">Sm-D2</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">snRNP core protein D2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">SNRPD2</name>
        <name evidence="11" type="ORF">MHBO_001001</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
            <location evidence="2">Cytosol</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the snRNP core protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000208">
        <property type="protein sequence ID" value="MES1919137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01720">
        <property type="entry name" value="Sm_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027248">
        <property type="entry name" value="Sm_D2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12777">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6 9" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9 11" id="KW-0687">Ribonucleoprotein</keyword>
    <feature type="domain" description="Sm" evidence="10">
        <location>
            <begin position="16"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11849" checksum="22BC8EC07CB34F68" modified="2025-10-08" version="1">MTTTTEKTEILKNGPMAVLAESVRKNTKVLVNCRNNKKLLAYVKSFDRHMNMVLENVTEFWTENVRSKDKKSEMVNRDRYISKLFLRGDSVIVVLRDPDGNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX7</accession>
    <name>A0ABV2AHX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001148</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000249">
        <property type="protein sequence ID" value="MES1919293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34689">
        <property type="entry name" value="NUCLEIC ACID-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34689:SF1">
        <property type="entry name" value="NUCLEIC ACID-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="169"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="23776" checksum="5E26BD47C4BB0F8D" modified="2025-10-08" version="1">MSKKHKNIKKRKKKSKKVSANSYGKFGVIQRTDNHTKHEEFIAWLIEVKKLNINAISKIEEKNLRQEFIEDFNTATLPHKKFYNIRKWEEKQSKKRSKVTSEDEKLEFGKTDAIRDEERLLRERREERENWKMANEKMRLQKMVDELKAAKESKRSAYNSALDRHRHPESKATFESIAEKRIARNRKNVEKKNGTFDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI71</accession>
    <name>A0ABV2AI71_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001227</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000274">
        <property type="protein sequence ID" value="MES1919386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14003">
        <property type="entry name" value="TRANSCRIPTIONAL REPRESSOR PROTEIN YY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14003:SF19">
        <property type="entry name" value="YY2 TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="156"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="183"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="129"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="312" mass="36533" checksum="32104FAE1187B84E" modified="2025-10-08" version="1">MSEQLLPSRADTYEVKTERIRRELRKRTTFKKGKDANSLWRRRWIPIKTIESSFSALTWVRADNDFSNSDSDLDEAISSRNEADSKGTAFSFFRSARRRCEARRRNKDPKKAAKEVPLRELVKGPLGSRLLPPGWVPRKKPSRRAAGDKNKGKTEHICDVCKKVYGDFNSLKKHKRIHGEKKHACQVKGCPKAFSEASKLKRHMMVHTKEKPFQCPYPSCRRDFGLNYNLRKHIQVLKIKIANPHGRTFGLFERRLRENVYGPECVEAARQIFPYKKLNLQILFSVFLEYLNRARFNFNKTKIFLPKSNFFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI80</accession>
    <name>A0ABV2AI80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001209</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000266">
        <property type="protein sequence ID" value="MES1919363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16940" checksum="98C4DEE575CB5C66" modified="2025-10-08" version="1">MEIEVLVTNIEKNLRSVEKSFNVLSSENRDFNFMLTYSKKIKIKLRNAKKDALSLKTELKSDGDEETKKVCTKIFRNWPNSRKPSRDTKQTTKNWNKVFTKTVELAKMKDEGIEQVTNYAYDLQDKTLETLANTKEVLVRTDEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC1</accession>
    <name>A0ABV2AIC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001267</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000287">
        <property type="protein sequence ID" value="MES1919430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19767" checksum="D9BDC94EBC0EFB7C" modified="2025-10-08" version="1">MNKKMIAFITGDTEEFVIFKNKIVVPPPEILKISYFGVEEEPKEMTIKMMKPRYLEIYKNIEFLIYNSDIEEALIFDPFEELTLTKGDFNFLKAFKLRFRNKITGLMSVEHHQKPTCYRDCGGTNCFKTGKTCEKCEGNFYMNLLLETCDRCPDNMVPDDENSDCSLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE9</accession>
    <name>A0ABV2AIE9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CDT1 Geminin-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000292">
        <property type="protein sequence ID" value="MES1919450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1420">
        <property type="entry name" value="DNA replication factor Cdt1, C-terminal WH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038090">
        <property type="entry name" value="Cdt1_C_WH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014939">
        <property type="entry name" value="CDT1_Gemini-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08839">
        <property type="entry name" value="CDT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01075">
        <property type="entry name" value="CDT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CDT1 Geminin-binding" evidence="2">
        <location>
            <begin position="109"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="334"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="462" mass="54303" checksum="9ACB719237F5B361" modified="2025-10-08" version="1">MASDSQKNIKTYFRHSKNLKEDFQTKNLTKLQTKSLKNGNNRHLRLLRKIKALSNPKTKNVALKNEKRNIVETTKIDGKELLEQYRKHRSLQTVENDQQKLKIRTNPILPLSFLRLLKIFRAIENCMSLYFFRDKKLVPIDEIKLSVEFQTKKLSFPKFRNFGKIDVLRIAKVVPEAIIAKYISKKEKSDGWRMIKTLVVQLVHLFDGNSILNKSFFIDQKIRKFRERVFYERLLKIVENEHDKFLERGNFVKIDVTKYNEWHAKFPIDDIDLPEPIEVEGEPVSGNLPVIEKSHFSCLASDALKSRLSVKRISKSKKETKNVRSKIKGISQKLIDKIKRKSEMANELNKFENERKEILKISKLKEFVRSVNEFLILSKRTKISFKNLAKTLKERNLVRNFNNNFNAQSLSRTINDITKLGTGWCRKTGRNNDILEVDSNIKLKHIFDKIDSKIESIQKIMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH5</accession>
    <name>A0ABV2AIH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001314</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000307">
        <property type="protein sequence ID" value="MES1919491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="22135" checksum="3F5E2A7D6581E093" modified="2025-10-08" version="1">MFKLCKNNLRTISKNATNKIAKAENIKIQKLIKNIDKPVNVTRKDFLENPQRLKMLSTVKIPNGLAKIAFDCNRGVPFVPPVKRKVRLASGRFAKSVLYRNPKGSILIEDATAISPLDLLNMAALDLVKLMNKIRVKRASFFVLLTLVPLFGYFYTKKAMSKANWKEAEMEIMREEMILSVKKVEKMARPVNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIL0</accession>
    <name>A0ABV2AIL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001069</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000226">
        <property type="protein sequence ID" value="MES1919208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12885">
        <property type="entry name" value="SPRY_RanBP_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001870">
        <property type="entry name" value="B30.2/SPRY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043136">
        <property type="entry name" value="B30.2/SPRY_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024964">
        <property type="entry name" value="CTLH/CRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006595">
        <property type="entry name" value="CTLH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044736">
        <property type="entry name" value="Gid1/RanBPM/SPLA_SPRY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006594">
        <property type="entry name" value="LisH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003877">
        <property type="entry name" value="SPRY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050618">
        <property type="entry name" value="Ubq-SigPath_Reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12864">
        <property type="entry name" value="RAN BINDING PROTEIN 9-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10607">
        <property type="entry name" value="CTLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00622">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50188">
        <property type="entry name" value="B302_SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50897">
        <property type="entry name" value="CTLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50896">
        <property type="entry name" value="LISH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B30.2/SPRY" evidence="1">
        <location>
            <begin position="1"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="CTLH" evidence="2">
        <location>
            <begin position="258"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="433" mass="49390" checksum="F38ABA9ECAEB73A2" modified="2025-10-08" version="1">MDIPKKDYYTDSNSAKPNCFHIENVPWPIKIYPDRVHAICKLSIDRGGTIRSEQPLPINQFFYYFEVDIIKLKKKITIGMIHKNFDPKQEIECNNMSSSFGYGTDGAGTNQQKLIFPRSRESVKDGDVLGCGILFNYAEMFFTQNGKIIDGMLFENIESAHYAAVSLGGLGDEIKVNFGQKKFACENVNKIVKNLCEDYMRRIMIKPSLEISDNLVSSFVSEYLIHHGYHQTLSALENKPNVDLTTNTSESRKKIIETMLIRRQVSDFILDGKPQKALNLVRKNFGNLDSDIDFALRCQIFSHTLLEKGLEPALLVAEIELKPYLAPHWNHVYDDAVKNVLSHIAFCKIEKNDQIVNDSNVLSNAPCYNKKHLQKLSELVNENILSILGINHSDPLELFFKQLVVVDAVQRAKRGYYGSPFCIEQDDYDNEDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIL7</accession>
    <name>A0ABV2AIL7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Trafficking protein particle complex subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">trs31</name>
        <name evidence="8" type="ORF">MHBO_001145</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="7">Part of the multisubunit TRAPP (transport protein particle) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Golgi apparatus</location>
            <location evidence="7">cis-Golgi network</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the TRAPP small subunits family. BET3 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000248">
        <property type="protein sequence ID" value="MES1919289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14943">
        <property type="entry name" value="TRAPPC5_Trs31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.20">
        <property type="entry name" value="Trafficking protein particle complex subunit 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024096">
        <property type="entry name" value="NO_sig/Golgi_transp_ligand-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016696">
        <property type="entry name" value="TRAPP-I_su5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007194">
        <property type="entry name" value="TRAPP_component"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20902">
        <property type="entry name" value="41-2 PROTEIN ANTIGEN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20902:SF0">
        <property type="entry name" value="TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04051">
        <property type="entry name" value="TRAPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017479">
        <property type="entry name" value="TRAPP_I_complex_Trs31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111126">
        <property type="entry name" value="Ligand-binding domain in the NO signalling and Golgi transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5 7" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="6 7" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR017479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19751" checksum="9F0676AA4E9027F9" modified="2025-10-08" version="1">MFFGGGNGEFDDNISASSFHFLFSEIIKWCCADEDDIEKVENNLFVIGQKIGFKQTEKILCKQKKRITTFQNLLQLIHNELWKSLFGKTADGVERNKNDKNQFLIFDKNPLTNQFVSVPSNLGDLNVATFIAGIVKGVLDANFVKSNVTTRYTSSKNKEETVFIIDIEDFSGFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW8</accession>
    <name>A0ABV2AIW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001055</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000221">
        <property type="protein sequence ID" value="MES1919192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF458">
        <property type="entry name" value="SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="159"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="215"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="243"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="268"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="292"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="331" mass="37500" checksum="572CD1A65A494416" modified="2025-10-08" version="1">MLRNEKKLNIERMQWLCMKIQKNVNLYQPNAEDRFNIAEANNYNLLYSNLKFLAKDDCERVDADKMQNTLDNLLSIPTFSPYSGTLVAPVPTKFKEVVSQAHSQNLFVEYSLFGAKKRAQTISDALSVLGVYISAFIIQQAVCSLFLSLEIRTITNWRIVQTAGMLITYCLCMGVALAGYLGQKDIIGETVFDKMKIRYFIDTGQIDYGFNSPFLVVNAGRIALCVTIALTFPMMFFYAKKNVLLILFALLDVIWGIKANKERPEAKYFYPVTVGLFVLVLIFGLFVDKIIVVFSVIGTLLAAPIIYVLLVKVRLYRSSVTSDQRADFQIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ9</accession>
    <name>A0ABV2AIZ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001082</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000230">
        <property type="protein sequence ID" value="MES1919222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sushi" evidence="2">
        <location>
            <begin position="180"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="362" mass="40365" checksum="2F7327D9624C3347" modified="2025-10-08" version="1">MYCPTNDLYSTFTTGNCSGSKVIENGKRCSLRCRLGLQSKQNFSLAYSSCYNGVWVHNIYKVGKIFSKNEFLCTLPKFLTNSTVVMIRDKNSECDLSKLLKDKHGISASSDCGNRNKVSSGQSCTIICQIGKFVLSENEKLRLVCEGGSWFAASVEEGGIFAKEVSSNFLICSVEITESAYCGELPDLKNGEYVKSECGFHAEGSVCRFMCYGSRIAMPYDKDRSRTCEGVIWCQNGKWVIPMCSEKLNNGTLSFARSENARSIINWENCVMNSIEEVTCCYTCIDDYEGPFIAENELNIASGYIKFSVSAWTKQICLKKDAENDSIDIDKKNFLLIKSEKSNAKKIESIVVTILIILIINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ21</accession>
    <name>A0ABV2AJ21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">28S rRNA (Cytosine-C(5))-methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.311</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">NSUN5</name>
        <name evidence="7" type="ORF">MHBO_001218</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.311" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000270">
        <property type="protein sequence ID" value="MES1919373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049560">
        <property type="entry name" value="MeTrfase_RsmB-F_NOP2_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001678">
        <property type="entry name" value="MeTrfase_RsmB-F_NOP2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048889">
        <property type="entry name" value="NSUN5_RCM1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807:SF4">
        <property type="entry name" value="28S RRNA (CYTOSINE-C(5))-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807">
        <property type="entry name" value="NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01189">
        <property type="entry name" value="Methyltr_RsmB-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21153">
        <property type="entry name" value="NSUN5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02008">
        <property type="entry name" value="RCMTFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51686">
        <property type="entry name" value="SAM_MT_RSMB_NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM-dependent MTase RsmB/NOP-type" evidence="6">
        <location>
            <begin position="114"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="339"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="212"/>
            <end position="218"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="235"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="434" mass="49768" checksum="49F3ED9B22865DC3" modified="2025-10-08" version="1">MSKNYVDAGSVVQNVLDGKGLKAELTRFNNQNVTLLATETLKYIFVLDSLFKNSGFLKKVKLVRSKILVSVVMVYDLCLGQGKITGGGKIKKLIYSHQNSLKTSLSRIKISCGAVNNEDLIPKEIKNYNQMKIYGKVHKQNLLYSRLKSDELKFDDFIPDLLILDRNAIARNKSLKLLIEEGAIVVQDKSSCFPVFALKKLGFGEGDIIDACAAPGNKSLQLSNSFKKSRIFSFEINSNRFKTLKKRLSIQNTKNVFARNVDFLNVEHTQYSTAKAILIDPSCSGSGTIFRNIDQWVQRKLKTENELRQEMNKYSKLQYKLVCHAMKFPNVDLIIYSTCSVKEEENEKVVKKILQNHEHFGLVKILPKWKRRAFKNYFNWEMMVRVDHIEDETGGFFVAGFVRKKSGNNLDCSKNCIFADEKKIFYKKLRLFDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ40</accession>
    <name>A0ABV2AJ40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DnaJ subfamily C member 13</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">DNAJC13</name>
        <name evidence="1" type="ORF">MHBO_001469</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000364">
        <property type="protein sequence ID" value="MES1919680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="440" mass="50303" checksum="1824694AE7CC25EE" modified="2025-10-08" version="1" fragment="single">MSLTKFSKAYCFGLISKIRYFFARTKIIMATFISTNMKRVKDFTLSKMPSPIAGNDYNSAGISILVSSLLDNDPRTKEASLDVIINVLSREDDNPNNINKKQLTPHLDDLVTNISALILEIDLNDDKNSLNTKILSLIALLFKESDFIGKQNRDSLVSGLKKAKTKIIKLSFKPDYNLLHSSLIIFKNMLLYGGENFDNNISLLILYNAIIPKYFLLFTSAKMINKDGHKTVYGDEAERQNIKSQTVLCISLLARIPQIEQYLLKLFPKGIENFIETVLDENQIDEKTKIDPKNNGKTTTFPKDISAPNIETALKWSYFLGSVFSKNFISPKFVWDETSRTDLDNFLETELENLVLKRNLNKDAIYNWKSAEPNFENDRTKVLFGDFYLVPLLDKADFDHVGLSKQMEFMEDLIVEVAVSKNVKEIFVKAILFVYEKIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ95</accession>
    <name>A0ABV2AJ95_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005287</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000253">
        <property type="protein sequence ID" value="MES1919312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019193">
        <property type="entry name" value="UBQ-conj_enz_E2-bd_prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31531:SF2">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE E3D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31531">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09814">
        <property type="entry name" value="HECT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="323" mass="37199" checksum="644C4092BA7B6E2A" modified="2025-10-08" version="1">MKYFLEKLENIGAILLYLKHGKQKPPKTEIKIETSKVKILILGNQFCLNFEDLRFEQNGSNFENGAMCSILRLKFDRNVKFGQKNSHFDVYNSKSELEKKNYDKIYCRKCDSDLEIEKIESVLAIPSMNWSDYTDLWSCHKESPNMLLKIEDNMLFVKRKSVLLNRTFIVCPLTANSKIFDVKLYNAKNPKLNSLSDLNLLPREFNGEIVSEINCKNCKSFLGLVVKKQYQKTILFKTQIKALNNIFDSYNNQNSLAANILSHSLDFNLNKLAIRNFRNPKESLKIYIISKIAKIAFGAIGSNEVVTPDFVDSVKLGYSSKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJH1</accession>
    <name>A0ABV2AJH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005296</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000398">
        <property type="protein sequence ID" value="MES1919782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="124"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="124"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19433" checksum="52B7B213200BBA23" modified="2025-10-08" version="1">MVDKAEIHPFEQLKQKLAKIEKSHISLQRKNQKMTQIKYVEPTEVLLKSIKIIENGDDFDKDTKYSLLTSMQIVTFELKHTDIFQKWPNVLSLISSFIKHKQKFSVPVLPSKFKNFFDEMEPHFPQKPLEPPKKAEKNSSNMSSKPSEDLKLVLETLELVKKYTDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN7</accession>
    <name>A0ABV2AJN7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001638</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000434">
        <property type="protein sequence ID" value="MES1919886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6461" checksum="D2BAB1DBDA3F49E3" modified="2025-10-08" version="1">MSLNMCLVAPFGLKVLLADITAQRRPPICKVSLCRRRLRNWKVILFAATISAAALFMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS5</accession>
    <name>A0ABV2AJS5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">HMG box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001425</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000346">
        <property type="protein sequence ID" value="MES1919628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.10">
        <property type="entry name" value="High mobility group box domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009071">
        <property type="entry name" value="HMG_box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036910">
        <property type="entry name" value="HMG_box_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050342">
        <property type="entry name" value="HMGB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48112">
        <property type="entry name" value="HIGH MOBILITY GROUP PROTEIN DSP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00505">
        <property type="entry name" value="HMG_box"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00886">
        <property type="entry name" value="HIGHMOBLTY12"/>
    </dbReference>
    <dbReference type="SMART" id="SM00398">
        <property type="entry name" value="HMG"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47095">
        <property type="entry name" value="HMG-box"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50118">
        <property type="entry name" value="HMG_BOX_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMG box" evidence="4">
        <location>
            <begin position="41"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="HMG box" evidence="4">
        <location>
            <begin position="129"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="HMG box" evidence="4">
        <location>
            <begin position="215"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="HMG box" evidence="2">
        <location>
            <begin position="41"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="HMG box" evidence="2">
        <location>
            <begin position="129"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="HMG box" evidence="2">
        <location>
            <begin position="215"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="102"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="118"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="34025" checksum="A960A7B4757780F9" modified="2025-10-08" version="1">MPPGDSSVSMKKMISNQQKKTNLKNAKKINSRVNRKRKRGPEPSNSALYYYRMDVLEEVADKYPNASPSDIVEVVQNQWEKLDKKSKEQYYRLAQMDQQRFDEEAKQYIPRSEGGTMKRPKRKKHPKAPKHPMSAYLYFASDHRAQVKVDNPDKDFTEIARILGDKWKSFDPEKKKGYEQKAEADKARYRKEKLAFEPCPLVVDSKKRKKHPLAPKHPLSGYLYFVANNRADFNKKYPDKDFTEVAKLLGEHWKNLGTKEKRKYQILAAADKKRYEEEKQKWQPPIERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK45</accession>
    <name>A0ABV2AK45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000490">
        <property type="protein sequence ID" value="MES1920044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8559" checksum="5FF67464D7D37C39" modified="2025-10-08" version="1" fragment="single">MAESSNSYNDAILVVSWEQICGQASVFVDEAGFSPFLWVKSHKEMAWESKGKRTQSLKSIDEIKSILFGVYGFCFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR3</accession>
    <name>A0ABV2AKR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001766</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000486">
        <property type="protein sequence ID" value="MES1920039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.367.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003836">
        <property type="entry name" value="Glucokinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363:SF1">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02685">
        <property type="entry name" value="Glucokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="40020" checksum="3A0C8D25501A08E0" modified="2025-10-08" version="1">MPSVMRILASEKYLMVALEPTTVEIILLTPNYFRPNPLTAKSDIRKSYDPRNFNSMEDVLETFFGETSVGTNDVKMYVVISFHGPTEGNAKFVKFSDWNLNADTICKKFDIEEVFICNKTKLISHSLTANGNKSILSNFIDLNMGSTRNPDAVSIVIEFEPMTFMYVVKDAIESECDHIEFEPLNQEEVQINSFFKEFLDVQKVDIGDVLSRKGLDIIYAYCCEKNLGAVNNEISERVSNSKIPGKVICELAFEKEDEICEIAVETFTEILASQIGNMAMQFFPFGGIFIVGDFIPEFMKQVDVKVFRESFKDKDKSNLLTLIPFFLQKLDGRELELESTKHLLSKKLATKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL71</accession>
    <name>A0ABV2AL71_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cytochrome b5 heme-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002059</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000639">
        <property type="protein sequence ID" value="MES1920382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.120.10">
        <property type="entry name" value="Cytochrome b5-like heme/steroid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001199">
        <property type="entry name" value="Cyt_B5-like_heme/steroid-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036400">
        <property type="entry name" value="Cyt_B5-like_heme/steroid_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00173">
        <property type="entry name" value="Cyt-b5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55856">
        <property type="entry name" value="Cytochrome b5-like heme/steroid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50255">
        <property type="entry name" value="CYTOCHROME_B5_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome b5 heme-binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10232" checksum="E81635E0D852975C" modified="2025-10-08" version="1">MSFSSSEDDPITLIINGHKYDVTDYINVHPGEGHNNIYLENFDKQDVTNQFNYYHKKTIQTNLKLLQRARERGCHKKIRHLGEISKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA9</accession>
    <name>A0ABV2ALA9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">GOST seven transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002088</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000661">
        <property type="protein sequence ID" value="MES1920420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053937">
        <property type="entry name" value="GOST_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009637">
        <property type="entry name" value="GPR107/GPR108-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21229:SF1">
        <property type="entry name" value="GH17801P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21229">
        <property type="entry name" value="LUNG SEVEN TRANSMEMBRANE RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06814">
        <property type="entry name" value="GOST_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="GOST seven transmembrane" evidence="8">
        <location>
            <begin position="3"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="261"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="276"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="333"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="365" mass="42300" checksum="9A7F413EF4DDC8B2" modified="2025-10-08" version="1">MSASIYWIFKCHKNKKNILFYHYIIVFLLLSTFFESILLFLYYEILNFSVASHSALKTVSKLMLIGRKMLSRMVVLLICSGVGITKETISTNEKKSAASFFALFFIFSLFNEVQKNSFGYKSEIVAFVYSVLSLMDVLLYAWAYYKLFLVLRRIGKNNKFKYSVYLKLTVLTIFGCLASVVFCTAEIIFVSSRKYTEVANWHYFLFYDVGFWEILFMYFICVVMKVLSPEIEISKYTQIENNAGDIEEHIEEKTKRLLSGSDNLSSFSDSEEEDVQKDVDLAADSTKSDDNGDDKSNKDIESEKKNENNQIDNDKTNDNDTKLKDFNINNDQTDEKTNVDETEKKINVDETDQKNIQKENKSTKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB5</accession>
    <name>A0ABV2ALB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001940</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000570">
        <property type="protein sequence ID" value="MES1920249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="GroEL apical domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10197" checksum="CD6BAB15877A1E91" modified="2025-10-08" version="1">MDFSLNVRKNEEIDRLQRDERRYASKIVQKIAKTGCNVLLVQKSIIRDALSPLSLHFLAKKRIMVVSDIERDDIQFIAKVHLFDERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALE8</accession>
    <name>A0ABV2ALE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002162</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000705">
        <property type="protein sequence ID" value="MES1920496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1112">
        <property type="entry name" value="COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="130"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="158"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="18792" checksum="148B57873B9D1AF6" modified="2025-10-08" version="1" fragment="single">MNQPNSQSRSNHRGPPGPTGLQGSIGLSGGTKAGPVGLPGEPGDSGIQGPMGNPGLSGFVIDGPVGPEGLKGFPGYPGPPGRQLNIPGHPGPRGPPGKPGKSGTAPPGPRGPRGGMGPPGIRGLMGITGPPGPPGPPGPPGVLPPRPPVYGGYDDESFSSTDTTDTSDSNTESSSETSSTSSSDYSSSDESSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF2</accession>
    <name>A0ABV2ALF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002182</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000715">
        <property type="protein sequence ID" value="MES1920516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1170">
        <property type="entry name" value="Sun protein, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023273">
        <property type="entry name" value="RCMT_NOP2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807:SF30">
        <property type="entry name" value="28S RRNA (CYTOSINE(4447)-C(5))-METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807">
        <property type="entry name" value="NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02012">
        <property type="entry name" value="RCMTNOP2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19998" checksum="035B1ECB9BC9A681" modified="2025-10-08" version="1">MADPNENSEISMDSDISDFDIEETHKKAATLKIQESTSEEIDADIEEPQTEPNQNEKKLGNKDELLIPRNDFAKDVAEMKSSIEKALSTLANLKQHPRRLPRKEYVERIASNAAELYSYSRELVDLFLGMFSPAECIRFLEANERARPVTIRANSIRTKRKELAKSLIERFLRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH3</accession>
    <name>A0ABV2ALH3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">FAD/NAD(P)-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002184</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000717">
        <property type="protein sequence ID" value="MES1920518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050151">
        <property type="entry name" value="Class-I_Pyr_Nuc-Dis_Oxidored"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22912:SF151">
        <property type="entry name" value="DIHYDROLIPOYL DEHYDROGENASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22912">
        <property type="entry name" value="DISULFIDE OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00411">
        <property type="entry name" value="PNDRDTASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="8">
        <location>
            <begin position="28"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="217" mass="22971" checksum="C3C87DA719DB2EA7" modified="2025-10-08" version="1">MLRIGSKIKKSRKFSVQTFATLSQATDFDVAVIGGGPGGYVAAIKASQLGLKTVCIEKRETLGGTCLNVGCIPSKSLLHATHLYHQAKHGLSKYGITVENCKADITEMQKNKEQSVLSLAKGIEMLFRKNKVDLIQGTASFTGENANSLSIQTSKGERKTITAANIIIATGSSSRSLPGVEIDEKNVLSSTGALSLKSVPERFVVVGAGVTGIELVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI2</accession>
    <name>A0ABV2ALI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">N-alpha-acetyltransferase 11, variant 2</fullName>
            <ecNumber evidence="5">2.3.1.255</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">NAA11</name>
        <name evidence="5" type="ORF">MHBO_002186</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the acetyltransferase family. ARD1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.255" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000718">
        <property type="protein sequence ID" value="MES1920521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004596">
        <property type="term" value="F:protein-N-terminal amino-acid acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04301">
        <property type="entry name" value="NAT_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045047">
        <property type="entry name" value="Ard1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23091">
        <property type="entry name" value="N-TERMINAL ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23091:SF4">
        <property type="entry name" value="N-TERMINAL AMINO-ACID N(ALPHA)-ACETYLTRANSFERASE NATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="4">
        <location>
            <begin position="2"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18640" checksum="F1B87E3416F229F5" modified="2025-10-08" version="1">MIIVRRAKFDDIIDIQNCNVQNLPENYVRKYFYYHLLSWPQLTLVAEDTSNNRIVGYVLSKMDEDASVKKGHITSIAVHFDYRTLGLAKKLMELTHLSMVEIFEAERSSLHVRVSNRNAIKLYSEIMGYRRESIEKEYYADNEEFFSCNFVQKVRWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL6</accession>
    <name>A0ABV2ALL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001893</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000546">
        <property type="protein sequence ID" value="MES1920197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="27074" checksum="666EDB203AEF36E9" modified="2025-10-08" version="1">MDDVEKLNETMRFFDFAYTKQSSFSGTLCFEIRTKDDQILTRTVRINGPKRTINIYEDRPKDIEIDCDLELSLETFLELYSGKHPLPYLINGSVRIENVWSKRSVISGFSRCFNFESENWDKFYQQEKAPEIKLKQESLNAKNDMRRNPTDSQIPKDINESTTSYSVLSNSCFKEFWSVEEQRQIFINPCFRKKEFNIFSKPAMLQIWRSPRPSKILKAISSFFGNKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS0</accession>
    <name>A0ABV2ALS0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002280</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the PI3/PI4-kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000776">
        <property type="protein sequence ID" value="MES1920628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.70">
        <property type="entry name" value="Phosphatidylinositol 3-kinase, accessory domain (PIK)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015433">
        <property type="entry name" value="PI3/4_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002420">
        <property type="entry name" value="PI3K-type_C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001263">
        <property type="entry name" value="PI3K_accessory_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042236">
        <property type="entry name" value="PI3K_accessory_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000341">
        <property type="entry name" value="PI3K_Ras-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10048:SF14">
        <property type="entry name" value="LD28067P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10048">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00792">
        <property type="entry name" value="PI3K_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00794">
        <property type="entry name" value="PI3K_rbd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00613">
        <property type="entry name" value="PI3Ka"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00145">
        <property type="entry name" value="PI3Ka"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51547">
        <property type="entry name" value="C2_PI3K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51545">
        <property type="entry name" value="PIK_HELICAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2 PI3K-type" evidence="5">
        <location>
            <begin position="208"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="domain" description="PIK helical" evidence="4">
        <location>
            <begin position="382"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="567"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="567" mass="66398" checksum="13EBCE957B66AA8B" modified="2025-10-08" version="1" fragment="single">MDWKETLRFLLDKDKLNFSIDPLSTAVSAYRAKSASHDYAKLIFNNYQKPKQTSRTEIRPGTTSCQCFVTLDRSIDQSGKTVIIDSDATTTASDLIYGILERIGKTDDKSDFILKASKMNEYIENDEILWNSAYPRSMIKQNKIIELRMLAKSKISKKIFETNSEKGFKDYKNLAIKSDFKKVLSGRDFNVAPNADVLKMDYIPFRECNFPFSVKILGVDNIKTPNKNLNDSICVKTFLFFGNKIIKETNSKTVYKKIQPKFATIWNERIGFANRSIKINRLPRSTKAAFLVCSKRLTDRNEIVAWIVVNLINEWGQMLSKKQKFNLWTLPMEVEHIFTAPTGENVIVNDNSKPTICVEFPEFILPVLSPKTIYYHSNGRADSIIDKRMNIVNEERLKQIYTYPLMKLTEEDQSLVWLDRNNIRNNFQRLKIFLKCIDWTNPHETREARKIFMSKKRPKHIREMISLLDYPFHDTLVRKETVKILYSLTDEEINCYLIQLVQALKFEQYHNSTLSQFLIRKAIKNPLQIGQAFFWNLKTELSDLLYSQRYYLILEEYLYKTGANCYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM28</accession>
    <name>A0ABV2AM28_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">HTH La-type RNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002346</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000815">
        <property type="protein sequence ID" value="MES1920703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07323">
        <property type="entry name" value="LAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045180">
        <property type="entry name" value="La_dom_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006630">
        <property type="entry name" value="La_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22792:SF132">
        <property type="entry name" value="LA-RELATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22792">
        <property type="entry name" value="LUPUS LA PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05383">
        <property type="entry name" value="La"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00715">
        <property type="entry name" value="LA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50961">
        <property type="entry name" value="HTH_LA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="HTH La-type RNA-binding" evidence="4">
        <location>
            <begin position="82"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="198"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="213"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="226"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="27682" checksum="8CEA734CAD6D8975" modified="2025-10-08" version="1" fragment="single">MENNTSDGKTQINKTRDQDVKEKVVYTLVPEIEAPSQESIPAIESKPVYNQTSFATYGSNQYSSRPRYPGKFSGQKTYQPKPFFALNTLTGIRRQIEYYFSDENLVKDKFFKSKMDKNGYVNVNVISAFPRMKNGNITEDIILNAGKRSKKIQVYGNFMRSKFSWHKFIESPMTQNPEETMESLKPEELSEEEFIILKEKSENEPVSEESDEENHQENIFKENQKLYGNNNVQQATYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA9</accession>
    <name>A0ABV2AMA9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Geranylgeranyl transferase type-2 subunit alpha</fullName>
            <ecNumber evidence="6">2.5.1.60</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Geranylgeranyl transferase type II subunit alpha</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002454</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to cysteines occuring in specific C-terminal amino acid sequences.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>geranylgeranyl diphosphate + L-cysteinyl-[protein] = S-geranylgeranyl-L-cysteinyl-[protein] + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21240"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11537"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57533"/>
            <dbReference type="ChEBI" id="CHEBI:86021"/>
            <dbReference type="EC" id="2.5.1.60"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the protein prenyltransferase subunit alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.60" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000892">
        <property type="protein sequence ID" value="MES1920822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.120">
        <property type="entry name" value="Protein prenylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002088">
        <property type="entry name" value="Prenyl_trans_a"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11129:SF2">
        <property type="entry name" value="GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11129">
        <property type="entry name" value="PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01239">
        <property type="entry name" value="PPTA"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48439">
        <property type="entry name" value="Protein prenylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51147">
        <property type="entry name" value="PFTA"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="39250" checksum="C37EA0D4C841DD4D" modified="2025-10-08" version="1">MHNIRRDDYYSRSNDDVQKTVHQIEKYNKLCDIVLAMKTRKAFSEKAIFVTEKILLINPDFYNSWNFRKEITDHFLNNAQKDQKIKICLEELKLSKKALYINPKSYPSWYHRKWIFDKNILDENELSKELLLTEKLLDIDERNFHCWSHRRHIVNLAKTALKDEFDFTTRKIEDNFSNYSAWHYRAILIKQMTKKQHFSLNLKDEFDIVTSAIFTDPQDSSSWLYLFWLLKRELKIDNILSIFEKPKIESFPTFGKKSVLDENIQNLFDNLRNLEKDENDCCWLELALVILDRSFGDFGGKTDLRLEKLREIDSLRKNMYSYLKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU7</accession>
    <name>A0ABV2AMU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002594</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001001">
        <property type="protein sequence ID" value="MES1920989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9535" checksum="2BF4D9D31EFB51E8" modified="2025-10-08" version="1">MQIAFRFRIFGAGSMASKLFVLFSSHAPQTDEADDPNTFLNRAKVTLLSIIFFFVTTCALVCWITLFYLGYLEEFSILSIVPEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY1</accession>
    <name>A0ABV2AMY1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002626</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001029">
        <property type="protein sequence ID" value="MES1921025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="259"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="286"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="327"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="350" mass="38553" checksum="9EB0C84395AE16D8" modified="2025-10-08" version="1">MISAIDFDSIKNAALKNLSSATSQVEKLLELEIILLLRSKIVEFADYLFANSSPTTKTVFIGSIYLLIGIGFMFFPTKFFKMVLGSSSFLFGTALFLYFISNFFDNLETNTFMILSILVVAVLSGFLFAKIIAKAFKPIFLFAITVSVIIASLILANYVSEYVVENFNLGKERVLVGYLKIISNDRTANPILGIIAFHVFVATVIFALSSIHKYLSIALIISYFVSLNDFVPSNFGQKTIFAPVIETVQKSVGREAVPFGHFLCGGLTILFAFEILMLLKITRFNFVSKVLGILAGFVILVAGIERITSGSTFSVPEEYMIRIGSRHTVSLISLATAATCSVVAFIVRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN04</accession>
    <name>A0ABV2AN04_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002643</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001046">
        <property type="protein sequence ID" value="MES1921045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="8723" checksum="E797EC1AC12AA962" modified="2025-10-08" version="1">MGDNNAIKEEDCTLFCKENFSGFVNAICGDEGIFVIEGRCSREPDGSDIVRQKLEPEKIEDGAKIGEPKLGSDLNDGELD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN16</accession>
    <name>A0ABV2AN16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002419</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000862">
        <property type="protein sequence ID" value="MES1920783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15050" checksum="9AA627AF4749FD24" modified="2025-10-08" version="1" fragment="single">MSRRLDLIGKSTEEIQRHSEKLNVEFSHLNSKTNSLISNNFDKFANTNELMTRLKSKTEEMDSSIKMAKEAFDRFVKIMSSDKSAKLLDDKNREYILTKKLNFAKKIPSVMQNDFDKKQFCDLIKKYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN34</accession>
    <name>A0ABV2AN34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ubiquitin carboxyl-terminal hydrolase 5</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">USP5</name>
        <name evidence="3" type="ORF">MHBO_002668</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001066">
        <property type="protein sequence ID" value="MES1921076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd14270">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00627">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00165">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="2">
        <location>
            <begin position="1"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="domain" description="UBA" evidence="1">
        <location>
            <begin position="250"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="368" mass="42586" checksum="87D369E3167382BF" modified="2025-10-08" version="1">MALPPFENLAKSNHIKNCPSLFPPNCLICQLCKLSDGIHSGKYSKFSSIFDINKKLTENENEQKGIDVSMFKSCLCIDNPMFLSHSQQDALELLVYFIFKMETSNFNEELDVSINIQKLLNCKFSTRFQCQKCKSSRFNKEPSDFLSLPLNILKEKKENDLMNCFEKFFEDEIIDDFKCDHCNEKTAVSKLSRINEFPKLLILQLQRFVFYKEKGVICKNDCPVNVPEQIDLTKFKQMDTNANAKTNEQSIDQNNIDSLMSMGFNKDKVTKVLKITNNDLEKALNLMLSVGDGFLEENNAINEFKIGGKYQLFGFVTHIGNSTQQGHYIAHILKNDKWVCFNDRKVFQSDLRAAKRAYILFYMSKDWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN39</accession>
    <name>A0ABV2AN39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002433</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000869">
        <property type="protein sequence ID" value="MES1920798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="30452" checksum="548FC0E5DE498A6E" modified="2025-10-08" version="1" fragment="single">MELFLKQTWEKDKNYALQSKDRMFVVTSIDASKIDEFLATNQPLQDDFELDEQKRYRFVKVAENGQIHLLVIENISYLDQNLLKKLKLVLSRFPFCGGYRLNGNNIVIDVDSEGTTPFDISRLNKDNKIMSAKIIIYLDIFITANGLYLNDLIDFDHVRLDSSGNLCVKFIQCVNKQDGNILRRAAVLIKAIRTVTLNDTADHRKNIHFVDQLCNSIMNLANAKWDLSTHVFEHPFFSQFKKNEIPTLLTRVWDNKIKMLFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN40</accession>
    <name>A0ABV2AN40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">3-phosphoinositide dependent protein kinase-1</fullName>
            <ecNumber evidence="9">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">PDPK1</name>
        <name evidence="9" type="ORF">MHBO_002378</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000835">
        <property type="protein sequence ID" value="MES1920737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24353:SF37">
        <property type="entry name" value="CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT PRKX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24353">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="8">
        <location>
            <begin position="15"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="348" mass="39044" checksum="D9DBA89E9B599BD3" modified="2025-10-08" version="1">MESNPGKHKLSTSDFKIYTVLGNGAYAHVVSARFTSKRPGGRLEHGGMYALKIVSKVKLLIHKKSASVLNEKAALKQLDHKNVVKLYETFQDESSLYFVLELASTTTMADFSRPMHSFSSPNVLRNLFGQVLNALEYIHGKGIVHRDIKPGNILLTERGSVKIADFGCCKLAETDNRNSSGRKSLIGTPAYMAPEIMDSGNDGDFESDLWSLGCTLYNVLLKRQSPFADKNDYLTLKRVKEGSVEYPAKMDADARDLIQKLLRAEPCERLGAREKGGFAALKKHPFFREVDFDNIEEDYSSFMPKHKSVIETFGDFESFVGIFRGRQSRTDFADHVGRKRATDSIIRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN53</accession>
    <name>A0ABV2AN53_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Serine/threonine-protein phosphatase 2A activator</fullName>
            <ecNumber evidence="2">5.2.1.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Phosphotyrosyl phosphatase activator</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RRD2</name>
        <name evidence="3" type="ORF">MHBO_002447</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the PTPA-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000884">
        <property type="protein sequence ID" value="MES1920813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004327">
        <property type="entry name" value="Phstyr_phstse_ac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037218">
        <property type="entry name" value="PTPA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10012">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10012:SF0">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE 2A ACTIVATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03095">
        <property type="entry name" value="PTPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140984">
        <property type="entry name" value="PTPA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0697">Rotamase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20458" checksum="B87101C9224046AD" modified="2025-10-08" version="1">MSVLSKKIKTAKDLEKFKKSDINKDIKNFISDISKHLIDKAQIKESEYSNILMNVLNDLNNWIDEIPPMKMEMRYGNKSFRNWHQKLENEFDNLFSNFASKSHFLELKGYFNGSFGNPIRLDYGTGHEFCFFLFLLCCYRLKIFSEDDFSCLALSIFPLFLICSRLNFKIGKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANB1</accession>
    <name>A0ABV2ANB1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Adenylosuccinate lyase PurB C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002723</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 2/2.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 2/2.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001110">
        <property type="protein sequence ID" value="MES1921147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.40.30">
        <property type="entry name" value="Fumarase/aspartase (C-terminal domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047136">
        <property type="entry name" value="PurB_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013539">
        <property type="entry name" value="PurB_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43411">
        <property type="entry name" value="ADENYLOSUCCINATE LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43411:SF1">
        <property type="entry name" value="ADENYLOSUCCINATE LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08328">
        <property type="entry name" value="ASL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="L-aspartase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Adenylosuccinate lyase PurB C-terminal" evidence="3">
        <location>
            <begin position="1"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12974" checksum="93EA868824AE6097" modified="2025-10-08" version="1">MRNLGPSIAHSLIAFESLLNGLTKLNPNFVKIKKDLEDNWILLAEPIQSVMRMENIENSYEELKKLTRGKEVSKREIKNFIAKLDITSENKKKLLNLTPENYVGYASKLAEIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK1</accession>
    <name>A0ABV2ANK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001035">
        <property type="protein sequence ID" value="MES1921029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="12857" checksum="4DBDED792095FA54" modified="2025-10-08" version="1" fragment="single">YEQLEKRVRGGGGLTYIGYGDEVMSLENSNNIASSIVSMGDNYCGISSSTSHSTVPCDLSMVNTVSSTVSVMKEDLRTIPLEHEINALSQLVECMRVDVEQTSMLMMYIKDYMKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANU4</accession>
    <name>A0ABV2ANU4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">uridine/cytidine kinase</fullName>
            <ecNumber evidence="2">2.7.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002879</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Pyrimidine metabolism; UMP biosynthesis via salvage pathway; UMP from uridine: step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.48" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001261">
        <property type="protein sequence ID" value="MES1921342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02023">
        <property type="entry name" value="UMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006083">
        <property type="entry name" value="PRK/URK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000764">
        <property type="entry name" value="Uridine_kinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10285">
        <property type="entry name" value="URIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00485">
        <property type="entry name" value="PRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00988">
        <property type="entry name" value="URIDINKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phosphoribulokinase/uridine kinase" evidence="6">
        <location>
            <begin position="10"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16845" checksum="F224DC43D2263C16" modified="2025-10-08" version="1" fragment="single">MTPSKKHTLIILMNGGTASGKTTVCEQIVRGLEKLSVRIISLDNYYRTPSKEEMENISKYNFDHPDSFDWKLMKENLESIKKRETTQIPLYDFRTHSRLEETETLAPVDVLIIEGILACYDKDVRDLADMIVFVDTDSDLRLMRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANU5</accession>
    <name>A0ABV2ANU5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002663</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HscB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001062">
        <property type="protein sequence ID" value="MES1921068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.20">
        <property type="entry name" value="HscB, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004640">
        <property type="entry name" value="HscB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036386">
        <property type="entry name" value="HscB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009073">
        <property type="entry name" value="HscB_oligo_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00714">
        <property type="entry name" value="hscB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14021">
        <property type="entry name" value="IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14021:SF15">
        <property type="entry name" value="IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07743">
        <property type="entry name" value="HSCB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47144">
        <property type="entry name" value="HSC20 (HSCB), C-terminal oligomerisation domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="3">
        <location>
            <begin position="63"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="25834" checksum="2397F73B424BA95D" modified="2025-10-08" version="1">MAIRFCKPNAANKIAFSNLNFRRLTSQNGNPSKCWLCGRKKMDRFEFSKTCSTCKVLQPSQQHNYFSLLRFPVQYSIDLDLLKNRYHKQQSILHPDKFTKKTGSLQKKSVDLSSLVNKAVGTLRDPLERAKYLLKLKGFDNDEKTHNTKMVVEMFALNEQIDKAEKSELVNLRLQNKKDVERRFSELGTFFYNEEWEKANDCLHKIMYLNRAIEIIDNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW6</accession>
    <name>A0ABV2ANW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002623</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001025">
        <property type="protein sequence ID" value="MES1921022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="24893" checksum="3E3DBCF3003BB106" modified="2025-10-08" version="1" fragment="single">MGFDKGEEDVKTLVKALKEKPKFGRLCIYTLNCFGHLAKNRVNLDRMAREKTFPTILSTLELHRDNPRIISEGCNPLISACRVKEYAKQIADDGGVEFCLKQLRSSKDKLSSARVADLLRALCDGYPPNIDKIKELGGEEVLRETLAEANRTKNKQLASSILSVLERMTEDDNFARGTSEKTVVEIVESLKVFPAQPTVVLPALNALNNLIRIQGQPLIDLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP13</accession>
    <name>A0ABV2AP13_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Profilin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002946</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001331">
        <property type="protein sequence ID" value="MES1921415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.30">
        <property type="entry name" value="Dynein light chain 2a, cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048278">
        <property type="entry name" value="PFN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036140">
        <property type="entry name" value="PFN_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00235">
        <property type="entry name" value="Profilin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55770">
        <property type="entry name" value="Profilin (actin-binding protein)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="125" mass="13875" checksum="128681299FBDB5B1" modified="2025-10-08" version="1">MSWKQYGDHFENSKIHASILDIKNKAVLHKATGHEPTTENITKLSGDLEALTSYKFGSDNFIVINKDINPSSYNFLVGMKGDKSLLLAILRTIAIVAVTDKNEITPGNARNAIEKVCDQLYSHNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN8</accession>
    <name>A0ABV2APN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003173</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001582">
        <property type="protein sequence ID" value="MES1921645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="20536" checksum="3ED9A0C08D1F03F8" modified="2025-10-08" version="1">MPVETPMHRPTPLLRIAAVHTNHFFVCAQNRAHLFRRQLVVSEFVPVHTRVFEPTQSFPKQRRRPFRVVVFFLLHHAVFVVFPAAPVVAARVAIVTRALDFDGIELVDDAGGLGELVVDANFDEVVFGEFDDFDLVDVFVGGAPGFEPVEERLALRLAVNEDDLEEVVEAASVGGDGVEIGFFVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS9</accession>
    <name>A0ABV2APS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mitochondrial inner membrane protease ATP23</fullName>
            <ecNumber evidence="1">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003222</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M76 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001636">
        <property type="protein sequence ID" value="MES1921692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019165">
        <property type="entry name" value="Peptidase_M76_ATP23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09768">
        <property type="entry name" value="Peptidase_M76"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="7"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU364057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18505" checksum="8F5689718462A3CE" modified="2025-10-08" version="1" fragment="single">MKFAIKMALANKKNVDLIQEINRLRKEKNKGELEIVIATTPMALLGVFDSKNDRIFLSNRLGILTASSTIYHELIHAYDHENGGDISLMKNRVCTEIRAYSISEAYFGIFNRKKKRVGKMAARTLDSVYKNLETDGNKDENLLEMKKLILRSMKNCYKNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW1</accession>
    <name>A0ABV2APW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">G-box binding factor, variant 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">GBF1_1</name>
        <name evidence="2" type="ORF">MHBO_002974</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001353">
        <property type="protein sequence ID" value="MES1921443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032691">
        <property type="entry name" value="Mon2/Sec7/BIG1-like_HUS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10663:SF388">
        <property type="entry name" value="GOLGI-SPECIFIC BREFELDIN A-RESISTANCE GUANINE NUCLEOTIDE EXCHANGE FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10663">
        <property type="entry name" value="GUANYL-NUCLEOTIDE EXCHANGE FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12783">
        <property type="entry name" value="Sec7-like_HUS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mon2/Sec7/BIG1-like HUS" evidence="1">
        <location>
            <begin position="111"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="318" mass="36456" checksum="452F90AE2210971E" modified="2025-10-08" version="1">MMATGLIRLQNENEHVLMKRIEVILDFTRSSLGSLLTDREIYDLFKICLKTAISNSNSPLLRIYAENVSNQSILFLFSRLHSKKFTETAQSPKNGKRTAFGLKAINSLMILLTELLNPYRTDLDNDENIMRYQLLGLKLIHTALESGGKEMSENELTRNVISDDLCKQLLHCSQTDNSRILSMCLRIVFILFNTSRKTLKTQLEIFITSVHIRIAESKFRSLELKELVFESLNEFANEPDLIAGIFRNYDCELKNNNVFEDIARILSEFALKSVGFDGKGEEKRSFLQVCEISGDALIATMRSIEKQNIQKQREIKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI8</accession>
    <name>A0ABV2AQI8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Gustatory receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001561">
        <property type="protein sequence ID" value="MES1921622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="245"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="266" mass="31258" checksum="17822A21F243B8E6" modified="2025-10-08" version="1">MSQILESVEILLCTNFILLLKFFLFCWAKCVVENGFSKLFDHRNVKTYCRLFGTLSTLCFAFLSFDPQNRLRVLSPKIYYLLRRAGFLFFVAIFASVSNLSLLAIRVLTDQTYCRFIYNVLLVLLSFSYCVLMAVREVMGLLWTCEEETDLTSQLDGIDVAMDLLEAGILLLSMVVSFYAYCKSYKFCNRLEAMLMDERRRVFREFRKWIIFLGFCCSTLVVVFVTNYQLVLYKKLRILTMDDRILFSIISFAILSLYYSIIYFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM5</accession>
    <name>A0ABV2AQM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003486</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001994">
        <property type="protein sequence ID" value="MES1921961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20847" checksum="06C23F36EC489505" modified="2025-10-08" version="1">MKSFTETVDREIRKYTQELDTILEKIEYEMFDGNLPYYTGLQEYDVDISSVFMALLPQTVSLTLMELIPVPPEISLHEFLKERVYEFIINGIGETDLEECLEMSITRKYIRILNQITNAYKQKLKYIRQTVYTLCKEKTTVQSHVSSCRKLMDKINRFRQNTRPLCMYMRKLDLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR2</accession>
    <name>A0ABV2AQR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003528</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002071">
        <property type="protein sequence ID" value="MES1922005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="12616" checksum="AFDF3E6B15BE84D2" modified="2025-10-08" version="1">MEHLRNYPQDKCQITGANPEGSPASIHKRAQSTHGVLRTAPTTGPPAEHCEHGTHSGLYIAYNPQPGDETNKPCSDPISVKSCHSSETTVKYTSFDTIVQNLMNWEGALLAKDVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY8</accession>
    <name>A0ABV2AQY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005286</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002207">
        <property type="protein sequence ID" value="MES1922097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="59" mass="6882" checksum="D423F98F7C33D513" modified="2025-10-08" version="1">MVTMNDKQRNKTQQQVLIANRSNMAVVKKRLFPFSSYFGTTKNGENRNATKKQIIKLHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR05</accession>
    <name>A0ABV2AR05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acetyl-coenzyme-A carboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ACC1</name>
        <name evidence="5" type="ORF">MHBO_003623</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002229">
        <property type="protein sequence ID" value="MES1922108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049076">
        <property type="entry name" value="ACCA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45728:SF3">
        <property type="entry name" value="ACETYL-COA CARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45728">
        <property type="entry name" value="ACETYL-COA CARBOXYLASE, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="PreATP-grasp domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="4">
        <location>
            <begin position="17"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="16715" checksum="3587EC82BC707292" modified="2025-10-08" version="1" fragment="single">MRTLIQKYVKELGGKRVIQKIFVANNGIAAVKGIRSIKKWSYETFGRENMFHFTVMATPEDLKSEAEYIKLADKFIEVNGGSNVNNYANVDLIVDTAERAGCEAVWAGWGHASENDQLPEALNQAGIIWIGPSPEAMRALGDKIGSTLIAQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR07</accession>
    <name>A0ABV2AR07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003616</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002213">
        <property type="protein sequence ID" value="MES1922101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11429" checksum="E50EA6F91ADF6410" modified="2025-10-08" version="1">MIESLEDADLCKEYQLKQIRQTECVFSSNGKNFLLKNKNFRDKKRRKFETKSETGKTGPMRKKTKLEKQVEISSFLKAKSPQSKTKKIAKETDLIVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR76</accession>
    <name>A0ABV2AR76_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Hikeshi-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003692</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002340">
        <property type="protein sequence ID" value="MES1922176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048364">
        <property type="entry name" value="Hikeshi-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031318">
        <property type="entry name" value="OPI10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12925">
        <property type="entry name" value="HIKESHI FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12925:SF0">
        <property type="entry name" value="PROTEIN HIKESHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21057">
        <property type="entry name" value="Hikeshi-like_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hikeshi-like C-terminal" evidence="1">
        <location>
            <begin position="136"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="21325" checksum="A135AD1F03574F27" modified="2025-10-08" version="1">MQIIVLVPGRPIISELVSAGEGKYTVDLQSPNQIAVFTLSVLPNQLPTGYGIGVQYSLDNFQNWDFVGVINDNCPTATCKFFVNNETEFKGDAPWSVVPSNALSSTVRLGFAVLPNQSLKALWERNEKTKHENKIKYAQKIARNLVDYLTSFTNSQNRGVFEVSDSRLENWYQKFCRKLNFDSKFMKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK8</accession>
    <name>A0ABV2ARK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003811</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002554">
        <property type="protein sequence ID" value="MES1922303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="27195" checksum="CD94D8F707457B56" modified="2025-10-08" version="1">MNPENKRDLMAFMGSDGQDGLEFLVFEAIYPTTARLGINIHKFDPNKLFFIELKLFKVRCSEHKNTAEDEEKPIMSSMITAKGLLKSAFDFIFPNNVVLQPGRYRWNISCVSLCALILRSTENRIEASGFFLKKDRSNKTPVDLYNGEPFFSLIMEARSLQQKSFNAKLRRSLDLKHSQTDNCDTYVFEEYVMERIKDFDEEFEEIIMNLKKMCKVLLNRKLFIELGFLLLSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM1</accession>
    <name>A0ABV2ARM1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">N-alpha-acetyltransferase 40</fullName>
            <ecNumber evidence="4">2.3.1.257</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">NAA40</name>
        <name evidence="13" type="ORF">MHBO_003707</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>N-terminal L-seryl-[histone H2A] + acetyl-CoA = N-terminal N(alpha)-acetyl-L-seryl-[histone H2A] + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:50600"/>
            <dbReference type="Rhea" id="RHEA-COMP:12742"/>
            <dbReference type="Rhea" id="RHEA-COMP:12744"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:64738"/>
            <dbReference type="ChEBI" id="CHEBI:83690"/>
            <dbReference type="EC" id="2.3.1.257"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>N-terminal L-seryl-[histone H4] + acetyl-CoA = N-terminal N(alpha)-acetyl-L-seryl-[histone H4] + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:50596"/>
            <dbReference type="Rhea" id="RHEA-COMP:12740"/>
            <dbReference type="Rhea" id="RHEA-COMP:12743"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:64738"/>
            <dbReference type="ChEBI" id="CHEBI:83690"/>
            <dbReference type="EC" id="2.3.1.257"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the acetyltransferase family. NAA40 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.257" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010002372">
        <property type="protein sequence ID" value="MES1922194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990189">
        <property type="term" value="F:protein N-terminal-serine acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04301">
        <property type="entry name" value="NAT_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039949">
        <property type="entry name" value="NAA40"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20531">
        <property type="entry name" value="N-ALPHA-ACETYLTRANSFERASE 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20531:SF1">
        <property type="entry name" value="N-ALPHA-ACETYLTRANSFERASE 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="12">
        <location>
            <begin position="18"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00049524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1922194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15167" checksum="6C1C72B034BBB048" modified="2025-10-08" version="1" fragment="single">KIREEDEITKKKNQFDDKQSKFIVLPQKAFLQFKPINDVDTNGELVIYILELQVVKEHQRKGIGTKFIQLIEEIAKSAKIEKLQLTALSKKRCVLSFYKANQFDFDKEMDPVLKFKKESSFRILSKDIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM4</accession>
    <name>A0ABV2ARM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003838</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002598">
        <property type="protein sequence ID" value="MES1922330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="25809" checksum="8CC4F81960C1CD1D" modified="2025-10-08" version="1">MFMLDGKCFEFAIYPVHLFYVSVGDLKAAVLELAGVLGGTPGERRGSLLDPFQIVLFERGTGWSRGFISERSLWLYIKSTLLGAGDSETLGDALAAVEEPVFLLRCEAMGRAQLERSASFVWQRVMYAQTKHLYLRRESPLPPREALGRLSALQLLADFGVACYGRREVERALSKIVPEAALREIGCAALAESVVAEVALVLGELEAVEGKFWKRREVIRLFNKAFAGAFFAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU4</accession>
    <name>A0ABV2ARU4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">TFIIF beta subunit N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003911</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002722">
        <property type="protein sequence ID" value="MES1922398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040504">
        <property type="entry name" value="TFIIF_beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011039">
        <property type="entry name" value="TFIIF_interaction"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17683">
        <property type="entry name" value="TFIIF_beta_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50916">
        <property type="entry name" value="Rap30/74 interaction domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TFIIF beta subunit N-terminal" evidence="6">
        <location>
            <begin position="11"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF17683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16388" checksum="659F0A4B1475B3BA" modified="2025-10-08" version="1">MSVYSKSSERKKRWLVKIPQFLAREWFEHKGNDAQNVLGHFNSTNEFVLAPFETIKRVSFSANLPEADLPNMFNLQKRDSFDPLFRKEEMILFKQPSELEETASEALLSETVDCRPVQNSAYKRYLKNKLRRWEVSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU5</accession>
    <name>A0ABV2ARU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003884</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002688">
        <property type="protein sequence ID" value="MES1922377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15673" checksum="C4B2A2480C5B69F1" modified="2025-10-08" version="1" fragment="single">AISDIMSIIRSFSLGLVCSGIAYDRFTRKLDCNFGVIKSEISKNIENLKKLTERFGRISQKNKMLCQISERKIDPILSAQMSENLSSKKALQNMYPYYWNQSLYSINDAIVNFFEYDYKNGAQKKWEKIKSFRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ4</accession>
    <name>A0ABV2ARZ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002817">
        <property type="protein sequence ID" value="MES1922441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6317" checksum="25516129CC9F9C5A" modified="2025-10-08" version="1">MIDVEVYKNTTFEAILIEWKKRATVTLAETPTTKGCSQIVLDGTDQDTSQHIVVFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS08</accession>
    <name>A0ABV2AS08_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Matrin-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002872">
        <property type="protein sequence ID" value="MES1922460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="96" mass="11477" checksum="00B6F6B43C79D6CA" modified="2025-10-08" version="1">MPRCNVCDRSVLDRNHIYKETHRKKLSKILKDFRLYKFSKSDCDNGAAWCFFCYKWIESPKFGQHLKGRAHFKNVQNLLSENRMSKSLAKIYCLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS25</accession>
    <name>A0ABV2AS25_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HNH nuclease domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003719</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002388">
        <property type="protein sequence ID" value="MES1922208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45766">
        <property type="entry name" value="DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45766:SF6">
        <property type="entry name" value="SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00507">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNH nuclease" evidence="2">
        <location>
            <begin position="118"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23345" checksum="136E80339A9350D6" modified="2025-10-08" version="1">MSFKTKTLRYSTKTINKVHIKNIEQRFAVEGDLPMCVYCNKILTKTKTKKDQILPLKNFFCSNECLREFKIKTAPNEGRKQIFDIENGVCQKCGINLRALYLRLKPLKPTQREKLLLKVKSFSVLKKERVLEICGKKRFSEGLLWQADHIVPVQFGGGNCPIENFQTLCAGCHYSKTCGQAKKATSFRKFLRDKKKNFIDLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS60</accession>
    <name>A0ABV2AS60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004018</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002971">
        <property type="protein sequence ID" value="MES1922501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19879:SF1">
        <property type="entry name" value="CANNONBALL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19879">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="17839" checksum="243DC2E27CC94D07" modified="2025-10-08" version="1">MYKNISSSLKICFSRIFSHPKILMEEYPKNKTIQFVKRNLANGQSAKDYESSRTKKIKIENTKNRDNFTKNRLPSIAMYTVFNSTQEDVKCTVSKNGRFVAMVNRNSTINVWDAKERSAMELAGHKSVVYDCEFLNFHDLAITASADKTCAKFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS69</accession>
    <name>A0ABV2AS69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ATP-dependent Lon protease pim1</fullName>
            <ecNumber evidence="5">3.4.21.53</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PIM1</name>
        <name evidence="5" type="ORF">MHBO_004033</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase S16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.53" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010002998">
        <property type="protein sequence ID" value="MES1922515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008269">
        <property type="entry name" value="Lon_proteolytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027065">
        <property type="entry name" value="Lon_Prtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008268">
        <property type="entry name" value="Peptidase_S16_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43718">
        <property type="entry name" value="LON PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43718:SF2">
        <property type="entry name" value="LON PROTEASE HOMOLOG, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05362">
        <property type="entry name" value="Lon_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00830">
        <property type="entry name" value="ENDOLAPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51786">
        <property type="entry name" value="LON_PROTEOLYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01046">
        <property type="entry name" value="LON_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Lon proteolytic" evidence="4">
        <location>
            <begin position="1"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="22302" checksum="287AB4E12254470F" modified="2025-10-08" version="1" fragment="single">GVATGLSVSEYSGGTTLYIETEVIGKLKNDKTNYHATGSLGKVMSESISIAFSVAKTHLKNMLKENHLTNKNLSDDDLNKNNNIEKVKENFFEENYIHIHFPEGSIPKDGPSAGVAMVTALISLATKKTVKKDMAMTGEISLVGNVLPVGGIKEKVLGAKLSLMKEVILPKENMADWEEMDDVVKKDIKPYFVESVAEVLKIAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC0</accession>
    <name>A0ABV2ASC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003118">
        <property type="protein sequence ID" value="MES1922570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.80">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045913">
        <property type="entry name" value="TBC20/Gyp8-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20913:SF7">
        <property type="entry name" value="RE60063P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20913">
        <property type="entry name" value="TBC1 DOMAIN FAMILY MEMBER 20/GTPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18606" checksum="191EEAB11F6DB14D" modified="2025-10-08" version="1">MTIEIIDNYYRDFLTDDILKSLQFAKFAMKIVEKTDKELYDLINLLTNEVTILSWIMTWFSQNKYSMDDIWNVFDFINKNNLVMPYYIAAQKIISNKDNLMCTECIDVEMKAISSQPETLEMLYESKKLFEKVPPSKVLELMKKDGDCIERFEFLAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF2</accession>
    <name>A0ABV2ASF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003162">
        <property type="protein sequence ID" value="MES1922594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="89"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="93"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13872" checksum="85F633C0CB922E53" modified="2025-10-08" version="1">MSDDYRYIVLPVLGIFLAAITLICISFTCKHIISEDDSDFTGRSLSLQRRRYGVFTNYLQIFRRPEDMDNNIRIHSNEIESFVTFQESGNIGNREDGQQKENVCEERSNERKSEDVLVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ2</accession>
    <name>A0ABV2ASZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003741">
        <property type="protein sequence ID" value="MES1922795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051034">
        <property type="entry name" value="Mito_Enoyl-ACP_Reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43981">
        <property type="entry name" value="ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43981:SF2">
        <property type="entry name" value="ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10416" checksum="5D60FC22181C9FF3" modified="2025-10-08" version="1">MSQTDLIDYPRADLALNAAGGSIVPPMIRFLNSRSTVVTYGSMSKKAILVPASTQIFKQICYKGFWLTSWVRKVGADAKLAAIEELYVFQTLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT91</accession>
    <name>A0ABV2AT91_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004417</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003970">
        <property type="protein sequence ID" value="MES1922888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="7531" checksum="ABD3ECF464234FCC" modified="2025-10-08" version="1">MVKKSKERITAQTLNKTSYCLDEPANVVDNNTEDKCTVFQRRTLEQKSIDTYKNRRKRQRHKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT95</accession>
    <name>A0ABV2AT95_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">subtilisin</fullName>
            <ecNumber evidence="3">3.4.21.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004426</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>Hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.</text>
            <dbReference type="EC" id="3.4.21.62"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peptidase S8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.62" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010003982">
        <property type="protein sequence ID" value="MES1922895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11337" checksum="F77D56868A296A43" modified="2025-10-08" version="1">MKKIRSSNNKTDQTHYTNKFVESLGQASFQIYKPEQLHETKNDTSFYSKDYKYNAHVPTGVWLTGAPLLWQQGYTGKGCTVGVIDTGIDPTHNDLQSLPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ5</accession>
    <name>A0ABV2ATJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004498</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004184">
        <property type="protein sequence ID" value="MES1922967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6675" checksum="16147CCF68DC2BE7" modified="2025-10-08" version="1">MSCANNSSRISLLLNLKENRFKPICKKWRAVPTIFDLEAVAFWKKRMSVLNYWENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL5</accession>
    <name>A0ABV2ATL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004101">
        <property type="protein sequence ID" value="MES1922944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20460" checksum="FF8143673BFB6171" modified="2025-10-08" version="1" fragment="single">NRSNSANITSLMKPFQSSIKVLNTKQKLIPNIQIPKNNYQDPKSYLSNSPHIEMNTGSRFNTNWWFTGQNSKITQNEMREIIVQKEKWQKKYIDLSNKMSILQEKFRKENFGEKTEDFEKMSEEKLIFKAIELCEKADRYQLVKSLSTSDLRQSAIIKCVLANRKAIEMICLSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU13</accession>
    <name>A0ABV2AU13_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C1q domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004687</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004877">
        <property type="protein sequence ID" value="MES1923142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001073">
        <property type="entry name" value="C1q_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00386">
        <property type="entry name" value="C1q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="TNF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50871">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C1q" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="10404" checksum="D93048299F23DC60" modified="2025-10-08" version="1" fragment="single">DDGIFIVPTSGVYVFVWTIVIDIKRYRWASVELFVNGAVLELTFADSSNEALDEAGGLTIVDVTAGGHVHIMIHENSNGIGSSNGRGRISFEDYLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU36</accession>
    <name>A0ABV2AU36_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004718</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004989">
        <property type="protein sequence ID" value="MES1923175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="11562" checksum="F912D94BA4432C8D" modified="2025-10-08" version="1">MRRKQMRREEEWGRKQMRHAKERRWEQMKREQMKTEQMRWDHLRHEEEMRQEQMMKQEEEKQNICFEIWLRLVQEFTDPYIYVCKKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD7</accession>
    <name>A0ABV2AUD7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">40S ribosomal protein S16</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPS16</name>
        <name evidence="5" type="ORF">MHBO_004810</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005369">
        <property type="protein sequence ID" value="MES1923266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000754">
        <property type="entry name" value="Ribosomal_uS9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21569:SF16">
        <property type="entry name" value="RIBOSOMAL PROTEIN S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21569">
        <property type="entry name" value="RIBOSOMAL PROTEIN S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00380">
        <property type="entry name" value="Ribosomal_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16585" checksum="E5E7A1655EAD3700" modified="2025-10-08" version="1">MSDPNKVYRAVQTYGKKKTAVAVAHCKRGKGMIRINGKSINLLEPASLRIKAMEPVLALGLKKFSDVDIRVRVKGSGSVSQIYAIRQAISKSIVAYYHKNHDESLKNEIRQILINYDRSLLVADPRRCEPKKFGGPSARTRKQKSYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG3</accession>
    <name>A0ABV2AUG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Subunit of the glycosylphosphatidylinositol transamidase complex-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">GPI16_2</name>
        <name evidence="2" type="ORF">MHBO_004858</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005563">
        <property type="protein sequence ID" value="MES1923305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007245">
        <property type="entry name" value="PIG-T"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04113">
        <property type="entry name" value="Gpi16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14274" checksum="BDC6D14AD708F483" modified="2025-10-08" version="1">MFVPFKSVVKFNFDFQKMLLTNQDYPSDVYRGFDIASATATPIFGKKILSNQVILYLSPPDHTMMYKTITYSSLVCAYFLLNLFYVVYNGPDEYSNRKPLFVKAIIFVWKMALFALRKFCKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ7</accession>
    <name>A0ABV2AUJ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HECT-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.26</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004877</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010005618">
        <property type="protein sequence ID" value="MES1923322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2410.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050409">
        <property type="entry name" value="E3_ubiq-protein_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11254:SF440">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE NEDD-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11254">
        <property type="entry name" value="HECT DOMAIN UBIQUITIN-PROTEIN LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00632">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="HECT" evidence="8">
        <location>
            <begin position="1"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="174"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="6">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23270" checksum="20D5CEE9DD38D263" modified="2025-10-08" version="1">MLKRHTIYKNCAEDSQFIKYFWDVLKNATDNVKTRFLQFASASGRLPPSDEEFKARGTRMQLQPLALRPGSDPDKAFPRAETCFFNVSLPRYTSKESAEKSISLALQLDWGMSGDEPDELLRTHLPLEAGEALQRGGNEMYTVILQRRERIERAPETTGSVVRLLSLLLQDPRNSEARRLNEGDEERRGERREDNEDLARQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN3</accession>
    <name>A0ABV2AUN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005858">
        <property type="protein sequence ID" value="MES1923370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15788" checksum="C8FAFEAE11ADD2F5" modified="2025-10-08" version="1">MLMARLDLNWTLKTVRDMTGDDTRNIPSITDLLSTMVSSGWAVSGRSGSNIVLYNNVLKQMVKLNDCAKKCVFFLRQFDIVSEQDVVAVEMGSLVPHEYVVYPVRDGRTFISRPYKRKLDGMDDANHGRSSDVQKRSRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ6</accession>
    <name>A0ABV2AUQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">General negative regulator of transcription subunit 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">NOT5</name>
        <name evidence="5" type="ORF">MHBO_004747</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CNOT2/3/5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005080">
        <property type="protein sequence ID" value="MES1923204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.1020">
        <property type="entry name" value="CCR4-NOT complex subunit 2/3/5, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038635">
        <property type="entry name" value="CCR4-NOT_su2/3/5_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040168">
        <property type="entry name" value="Not2/3/5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007282">
        <property type="entry name" value="NOT2/3/5_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23326">
        <property type="entry name" value="CCR4 NOT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04153">
        <property type="entry name" value="NOT2_3_5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NOT2/NOT3/NOT5 C-terminal" evidence="4">
        <location>
            <begin position="45"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="15166" checksum="C72F627F972B8565" modified="2025-10-08" version="1" fragment="single">MDQNGQSNSSNVEDSSCSEETEIDLLEQRYAQLNESFKNFEDLDVREKPEYQPKNPCETPDFFPKECYHRRTLKEFRKLDIETFFFIFYFQQGTIEQNFAAKILKGNSWRFHKHFLTWFQRSKEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV15</accession>
    <name>A0ABV2AV15_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Telomerase reverse transcriptase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006561">
        <property type="protein sequence ID" value="MES1923508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="129" mass="15181" checksum="07F988C1C57C6F16" modified="2025-10-08" version="1">MYWQYIMSKSADKWKVEAIHDNGYRMFNFVWDASIRILTHRIKKCTDERLFGRLAKDINSFANICAVFHCGKRFNKMMILLSSVCIDFLDSCCARRGELSPKEAFSKFGLLHKVLELFYSLVHSYGFFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD3</accession>
    <name>A0ABV2AVD3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004981</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006088">
        <property type="protein sequence ID" value="MES1923414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6226" checksum="F3E59FDAD6BB4D28" modified="2025-10-08" version="1" fragment="single">AVTDFGEMSEPSEVGFSPVLYHKTSAGACVKKESHPDTAIAMVAEGCNTRRPIREDTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVI2</accession>
    <name>A0ABV2AVI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005051</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006360">
        <property type="protein sequence ID" value="MES1923474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="20008" checksum="A3AEFFCB3451F304" modified="2025-10-08" version="1" fragment="single">MRLAKSMISKLFLQNLVKSKTANFLFLHFRRGKINFAAVPRNESSIINANYFLQLCRNGQQNELNKLFSDQKNIRKYLVAIDRYYKSISYAQRIFIAIATNIELIYKCEKKLIAKIAKNNLNYMLRYIYCVSIVEYLLMRAKGEEDYSFYAEMLLTDFSKNLCSEFGPNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW45</accession>
    <name>A0ABV2AW45_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rhodanese domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005172</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006969">
        <property type="protein sequence ID" value="MES1923576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00158">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="entry name" value="Rhodanese-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="Rhodanese/Cell cycle control phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="24"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12370" checksum="7DD31C325AB52E12" modified="2025-10-08" version="1">MMKRVNGIKQISCSALKQILNVDKKTDFVVIDVRPANLYNESHIPKAINLQYNDILDNPAKASNELEHLNSKQIAYVICSKGISSQAACEVLKDTSNLNFVNVVGGMNEFSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE25</accession>
    <name>A0ABV2AE25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">60S ribosomal protein L7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RPL7</name>
        <name evidence="3" type="ORF">MHBO_000025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01657">
        <property type="entry name" value="Ribosomal_L7_archeal_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.20">
        <property type="entry name" value="Ribosomal protein L30, ferredoxin-like fold domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036919">
        <property type="entry name" value="Ribo_uL30_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039699">
        <property type="entry name" value="Ribosomal_uL30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035808">
        <property type="entry name" value="Ribosomal_uL30_euk_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11524">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11524:SF16">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55129">
        <property type="entry name" value="Ribosomal protein L30p/L7e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1917989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13294" checksum="D9E861A70C582EEC" modified="2025-10-08" version="1">MIKLVEPYIAYGYPSLKTVRELVYKRGHGKINKQRIAITDNKMIQATLGKDIICVEDIVHEIFTTGKNFKKANNFLWPFKMSSPKGGYNKKGTHFVEKGDYGNRGKAINDLIKRMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE40</accession>
    <name>A0ABV2AE40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000040</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="12593" checksum="47F3B55DE1F0F693" modified="2025-10-08" version="1">MAALGIEPRTPQFIFDVQLYHCPATSAMIFKILCSKPLIVLGFNLLNSPEAKELRARVFISSFATSGRETFLRSYRPSFAAFRISLTSSLSMGLKLAKSTCLSHRRCSGPDSLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC9</accession>
    <name>A0ABV2AEC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GID complex subunit containing RING finger motif</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">FYV10</name>
        <name evidence="1" type="ORF">MHBO_000101</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000012">
        <property type="protein sequence ID" value="MES1918079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045098">
        <property type="entry name" value="Fyv10_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006594">
        <property type="entry name" value="LisH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12170:SF2">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN TRANSFERASE MAEA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12170">
        <property type="entry name" value="MACROPHAGE ERYTHROBLAST ATTACHER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50896">
        <property type="entry name" value="LISH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="27245" checksum="96BE20D52E611EFE" modified="2025-10-08" version="1">MDKKECIFIMETLLLSQIYNKMEKAVRNAQKLYMKNCFDFDKQKVAILEDSIKSRSPKEKIVDKIDALIGEATDFKIRLTKFENIRSKMEEKLMRRLKFISRISKNQICSINKKITKIDKNYKKIDLSLNVDILKQENIIESSLWEQRAIETLICDFLARNRYFKLAQKLAKSAEIEVLLDIDEYENLFNVKSSLRKDNAKDALVWIKRNKSKISKLNVLTIIKVGNRDRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEJ5</accession>
    <name>A0ABV2AEJ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000124</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000015">
        <property type="protein sequence ID" value="MES1918106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="128" mass="15012" checksum="B816AC2787A80753" modified="2025-10-08" version="1">MRSMNAIRHPENLAPSPKTNSKTHQYIKRVGNKVVFQFFEQPVLKITLKQINAEFDLDIVEIIRSLCALLEQHYAKLIEFCTGPSHRKQIRHLDEKINVFNSKKKGIILRKIVKILNKKMRKSSNKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AES0</accession>
    <name>A0ABV2AES0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000188</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000024">
        <property type="protein sequence ID" value="MES1918177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15153" checksum="C797E2EEF532B396" modified="2025-10-08" version="1">MKLKDSLQIENKKGKILFELKENDVIWSRDTILLKSDWIKLKYIRSKNSLENSENISTGFEIFVTAVKMDKLSKYRKTWLWDLRQQAAATLGRICSVMMDSNNVTGNEKIFKKFFFNFDIKNVVWTVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEY2</accession>
    <name>A0ABV2AEY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Acetyl-CoA hydrolase/transferase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000241</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000032">
        <property type="protein sequence ID" value="MES1918243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.70">
        <property type="entry name" value="4-hydroxybutyrate coenzyme like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1080.10">
        <property type="entry name" value="Glutaconate Coenzyme A-transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046433">
        <property type="entry name" value="ActCoA_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003702">
        <property type="entry name" value="ActCoA_hydro_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21432:SF20">
        <property type="entry name" value="ACETYL-COA HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21432">
        <property type="entry name" value="ACETYL-COA HYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02550">
        <property type="entry name" value="AcetylCoA_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acetyl-CoA hydrolase/transferase N-terminal" evidence="1">
        <location>
            <begin position="4"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="29385" checksum="8C7068FB65DE5AF5" modified="2025-10-08" version="1">MQAIRSKNRIFIHGAAATPIVLIKELAKKGIEDKLNDIKLYHIHTHGFLPVGAEYDGIFSDFSLFMGKNVRKAVNAGKADFIPVFLSQIPKLFTDNVIDLDAALIQVSPPDKHGFCSLGTSVDCTRAAIKNAKIIIAQINSFMPRTHGDGQVHVSHIDFAVEHNEKLFGWDDEPVEPNEIQKKIGERVADLIENDSAIQLGIGAIPNAVCASLANHKNLGIHSEMFMDGVVDWVYNGVVNISGNNVQNVKPIFSFAVGKKNLYRFLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF33</accession>
    <name>A0ABV2AF33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000291</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12796" checksum="4FF6B377CB011005" modified="2025-10-08" version="1">MYCEKGHQYEKKFCQDADKGSKCEKCTGKIALGGLVSGENYYYCDKCEENVCRRCVNDNVFKFEFCLKDLADFEEPRKNRRKHRKLHYNDAQKLAVFIFCYRKYCQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF73</accession>
    <name>A0ABV2AF73_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_000325</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16448">
        <property type="entry name" value="RING-H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003892">
        <property type="entry name" value="CUE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15067">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15067:SF4">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02845">
        <property type="entry name" value="CUE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51140">
        <property type="entry name" value="CUE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="11">
        <location>
            <begin position="111"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="CUE" evidence="12">
        <location>
            <begin position="229"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="269" mass="30990" checksum="846555F2492E959B" modified="2025-10-08" version="1">MSVQIATQLAIYSYPLGDFSCGERADIVFNIDKVADIFLNSCDVVYILFVNYMRGFSSIIFNIIVAYKFVWSVHKIFIKIRSHIRYRAINKRLSQSFLNATKEDIEKVGRCVICCESLKEGKKLDCGHIFHLRCILNWLKYKNLCPMCRKSITIQNADSAQNAFLIGNSSLNASYERRGANTVFRLNTPRLGFLLPSINFEFHQIFSGSNIGNRQRRTEANSRAAPDTRHEQMVHNVSQIVPNVPVETIRWQLRRNNYNVTRAVNNLLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS6</accession>
    <name>A0ABV2AFS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000501</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000081">
        <property type="protein sequence ID" value="MES1918546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="19895" checksum="D760B32409DC1F30" modified="2025-10-08" version="1">MWLGFLSLRNILQNLPGFKEIFGLLFKLILSGPGILATILIIALCFSSAFTEYLENNQIVFLNIVFILPGFIQVLAVPELIQTIIEVIPFIDFTIMVHDGYYYAVYAYSVMLFTLLVLMIDGISKPIPPLRPVELDDQMCQDNEEVCDPLHMEDYVSAAQTVVAKRVLNDEVNFAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY5</accession>
    <name>A0ABV2AFY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">L-type lectin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000549</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000092">
        <property type="protein sequence ID" value="MES1918605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051136">
        <property type="entry name" value="Intracellular_Lectin-GPT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005052">
        <property type="entry name" value="Lectin_leg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12223:SF28">
        <property type="entry name" value="LECTIN, MANNOSE BINDING 1 LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12223">
        <property type="entry name" value="VESICULAR MANNOSE-BINDING LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03388">
        <property type="entry name" value="Lectin_leg-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51328">
        <property type="entry name" value="L_LECTIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0732">Signal</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045767724" description="L-type lectin-like domain-containing protein" evidence="8">
        <location>
            <begin position="20"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="288"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="327"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="350"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="387"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="L-type lectin-like" evidence="9">
        <location>
            <begin position="20"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="153"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="415" mass="47724" checksum="B7030C2120DCC923" modified="2025-10-08" version="1">MSVKLFCRLAVLFASINNAFKISNTHSLNHPINSNVNTKNFEYGGSTVITSDFLRLTTLSKGTLGWLKAPKPLHSDVVEVQLEIRISGPNKFHGGDGIAMHFFDAEDNSSSFRSHYQKKDLFGVDPSRKGFSVVLKTNEKNYNQIIYVDDNMEQDREDNSKKENKKSKRRSSCAVNIRNQDNLKLIVRLFRDNVYVYKVIKRPGHKRGNTEFCLDAHLSRKFDHKPVLGVSATTSEKTDNIDVYSLQVRYKEPSRAQGTENVEKFLERARKNFPRKALRLPKNRIKRMFWFAAVISGMLLFLETVWELSLLQHVVNDKLVPKETLNLINLAVPYTNYVMIGLFVYTLLSFRILMAIFLAPIFAFKVYRLTNKKNKLKSDEFDYTKNFNGYSIMQCASVVAYAFYVMLAVGKLVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY7</accession>
    <name>A0ABV2AFY7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ubiquitin carboxyl-terminal hydrolase</fullName>
            <ecNumber evidence="8">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000532</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 7 8">Belongs to the peptidase C12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000088">
        <property type="protein sequence ID" value="MES1918581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.860">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.532.10">
        <property type="entry name" value="Peptidase C12, ubiquitin carboxyl-terminal hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001578">
        <property type="entry name" value="Peptidase_C12_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036959">
        <property type="entry name" value="Peptidase_C12_UCH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017390">
        <property type="entry name" value="Ubiquitinyl_hydrolase_UCH37"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041507">
        <property type="entry name" value="UCH_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10589">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10589:SF16">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01088">
        <property type="entry name" value="Peptidase_C12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18031">
        <property type="entry name" value="UCH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038120">
        <property type="entry name" value="Ubiquitinyl_hydrolase_UCH37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00707">
        <property type="entry name" value="UBCTHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52048">
        <property type="entry name" value="UCH_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52049">
        <property type="entry name" value="ULD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 7 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7 8" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 8" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="4 7 8" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UCH catalytic" evidence="10">
        <location>
            <begin position="1"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="234"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="7">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <feature type="site" description="Important for enzyme activity" evidence="7">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS52048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="294" mass="33640" checksum="B41137E223C54E7B" modified="2025-10-08" version="1">MWSTIESDPGVFTELIERLGVKNISVEEYYDLDTLDKQEKVFGLIFLFKWTSLKPPNKKTKQQIPQNLFFARQIIDNACATQAILSVLLNSSEIQLGKFLNEFKKSCSSCSHEEKGIVIGNSKYIKSVHNSFNTHGLFYSNNGSQPSQTEDAFHFITLVPFENAVYELDGLKFSPVLIADGVDKSEWLKIAKQHIKSKIEILGSSEIGFNLMGIVPDNRTEIKAQIKRLQNLDKAENSSKIVKLQEKLVEEENKFKNWKIENERRRHNYVPLIMTILKMLGQKGVLAKTLKKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB8</accession>
    <name>A0ABV2AGB8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ATP-dependent RNA helicase DDX60 PIN-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000482</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000076">
        <property type="protein sequence ID" value="MES1918519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055124">
        <property type="entry name" value="PIN-like_DDX60"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23002">
        <property type="entry name" value="PIN-like_DDX60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-dependent RNA helicase DDX60 PIN-like" evidence="3">
        <location>
            <begin position="120"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="605"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="536"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="14"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="25"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="605"/>
            <end position="614"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="615"/>
            <end position="628"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="691" mass="79638" checksum="A66E765A37A9D5E7" modified="2025-10-08" version="1">MSSESEDNWEEIDYSSSSEESAVSETDKTELKTEQNQKRWDLTEIIPHLEHISTDPEKSVFVDDDDFPRFENEEKAVNFLNKMAENGLLDLNSEATRKRIFEIADFGYKQIGHDTNRTIVVEFDSLFLNLVQHPLVENFKAQNQQFLPLVFAFEKFVSQLRSGHRRLEIHVFRSAEKLYRSPVKKLARRILIDNFKKQKLIKLKEFENWHSDSWRDNLALVDPAFVCISGCSLDAADAKLLHFIRGFALILFGKKVQCVRTEELFFFSNALYGFVFEIFSGVQQFLSVRTDSIQILPKPAKNGVVSNKNENDKIFDKNGVASNKNENDQIFKVLEETRRTLKNDKSFVPVAFGINMLLSKKDATEKLRENCQMFATATIIKNNLSLKTRAVISKQIKCDFDWTEADSDFLNQICSAIFDSFEIFDSEEKSRMCDIVDSRFFFKMKSLLSENFVNSDLDKMGSLWRDQKAVLASFAKSLQNSNFRSKFGENSRSSVFSLQKIDGDASETLCSEINDFLNENNLVFDDPDNAGNNEKLEKELFICDELESEIKDAEMNKKWETDQEKIRLEGINRIKFYAFMKKYSESLVQPKIVLRDVVVEDLGESKSEEKEGKGTKTKKKGKKGKTKNNRTEQIIAKNKLKQTQKAKDDLITFIEHALKPLALDTKIERLDEKLLPLKNPVIALPGQIQVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGC0</accession>
    <name>A0ABV2AGC0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000656</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000116">
        <property type="protein sequence ID" value="MES1918740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1690.20">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="199" mass="23345" checksum="43F88BCF37D1DCAF" modified="2025-10-08" version="1">MFSRSYVKQAIYKTAFALNKTKFGHSLRHFSNKSQYVPNKKYGPSKIQKPRVFTFKRIVVLVLCTVYALAVTIPISNSQMDFYNFAIEFLAVGRVEKLGIFGNRIFVTLRNDDSEKICHSKKKIERNKNALRAIFKESNHVNFVLSHEKVFKYKAFNWFGERRVVFCVESPEDIEENMMLLENALKLPAEKRVKIEYRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD2</accession>
    <name>A0ABV2AGD2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000629</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000110">
        <property type="protein sequence ID" value="MES1918707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7042" checksum="EC65F85A7B5C1BE8" modified="2025-10-08" version="1">MALFFDKASRTGFDKSSSSFLWRSLSSSSMSPCTSPITSFTFALKLSKSLFCASSSFSLTFSSLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD4</accession>
    <name>A0ABV2AGD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Translation initiation factor eIF4E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">EIF4E_2</name>
        <name evidence="7" type="ORF">MHBO_000606</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the eukaryotic initiation factor 4E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000104">
        <property type="protein sequence ID" value="MES1918672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.760.10">
        <property type="entry name" value="RNA Cap, Translation Initiation Factor Eif4e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023398">
        <property type="entry name" value="TIF_eIF4e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001040">
        <property type="entry name" value="TIF_eIF_4E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960:SF8">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01652">
        <property type="entry name" value="IF4E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55418">
        <property type="entry name" value="eIF4e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="26627" checksum="0C97D1CEBBB64E89" modified="2025-10-08" version="1">MAESKVDKNTNSIEKEFTEKLKIDEVRPKIENSQKPIKENSQIRENENKQHDLNDSWVLWYSAGIKKTRNVSENDWMRSLEDVCSFKTVEEFWEIFDNLRPISMMEPSASFYLFKDGIKPTWEDDANKIGGRWMLSFRGSERDACDEIWLFLTMGMVGNVLDHDNDICGAVISSREDELRLSVWTKTGSDMRTQLMIGNNLKRVLMLPSDKNLMYRLHDGGKIEYKIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK7</accession>
    <name>A0ABV2AGK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000717</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000131">
        <property type="protein sequence ID" value="MES1918814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20381" checksum="94477DD2F980B6EC" modified="2025-10-08" version="1">MENFGLYLFEPIDCADIFEGQNSNLLITALAFTVDPNNHQMNVIRSLENLNKVLKVEAIENLRTQIDSSGLSEYLLRNDCFWSQKRSSAMEKHTMQFSTMVLKNEVAFICRGDVTKIPYLNQNECLISQVRIPGLGKLNLLVDPLSFPIKVSPGIVLFAEKTGNFNIYYWYSKKYYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN7</accession>
    <name>A0ABV2AGN7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Accessory factor associated with RNA polymerase II, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CDC73</name>
        <name evidence="6" type="ORF">MHBO_000734</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CDC73 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000135">
        <property type="protein sequence ID" value="MES1918835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11990">
        <property type="entry name" value="RNA polymerase II accessory factor, Cdc73 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007852">
        <property type="entry name" value="Cdc73/Parafibromin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031336">
        <property type="entry name" value="CDC73_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038103">
        <property type="entry name" value="CDC73_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12466">
        <property type="entry name" value="CDC73 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12466:SF8">
        <property type="entry name" value="PARAFIBROMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05179">
        <property type="entry name" value="CDC73_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="Cell division control protein 73 C-terminal" evidence="5">
        <location>
            <begin position="179"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF05179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="335" mass="39594" checksum="BE0EB9467259CC09" modified="2025-10-08" version="1">MSFIETFSKSLSKQQFDKWTEKDEKLFFEGKSFNKESSTQLKSSKGFPYSVWSIFTCYKDRKLDYGKYISNCFENGIKRVDMVDRKKILRIIKNSNLTSKELEKKQTGGIVKKLKKSKILKIHDDEIFTYSINGYNQCPSLKPKECFELIAKFETVLKRERRGIDIKSKKVQNDPDSKNKVPIILVPSAVTALINIYNAQNFLENNQFVACGEDNLLIRQKNRKINVQLTKNSERKIFRLTDSIHNIEEWDNVVAVIVSGKNWQFKKYKYKPPMLFSKIKGFYFQWDGQSTERHIQNWNVEILKISRNNRNKDQKVVFDFWKILSAFLEKVKFSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV5</accession>
    <name>A0ABV2AGV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="70" mass="7991" checksum="C4762851472DCDDD" modified="2025-10-08" version="1">MYTNISILFLFGSRNSSSKIFAKTGFLLLSKGSFPSTFLFAFWKIPKILLYKEKNSFSGKGSKFFNVSFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH27</accession>
    <name>A0ABV2AH27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nucleolus and neural progenitor protein-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000846</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000166">
        <property type="protein sequence ID" value="MES1918962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="185" mass="21407" checksum="82E651A764A297A7" modified="2025-10-08" version="1">MGLTTKIAGMKTGADFFSLEAAILKRLLYKTKNQHRRAIYYRKLQHVLKLSLQTKCLVYEILMTICKCESVDELEKIRKMWNVTEATIFKLSVSVKNATINLISLIERTFFLPVAITSLAICSRIYFLSESFKPKMQNILKELDGKKSKAKNLELKKRKRERSKIKKSTEKSSETIENIFSNIFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHE2</accession>
    <name>A0ABV2AHE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000949</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000193">
        <property type="protein sequence ID" value="MES1919080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045335287" evidence="2">
        <location>
            <begin position="16"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23984" checksum="ACB13CC61B859A98" modified="2025-10-08" version="1">MLFMFFYLMVDFAFSAQQNLIDLPFNASYILQDKSNSSIPKYRVGTAFSILLGISNREIEDLRISSITANLTSIMNPKYQPIEIFKSETESEIKINEDKTISIEMKVPQYVEPLNYRIVVTVGYHSGFGEIEDQSFVIVDEEIKVLSHKIEISKETKIFYFSIFVLLLFRFKKTILSIFAKKEKIVQRDKNTDKKLTKEQVLDSFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF4</accession>
    <name>A0ABV2AHF4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Derlin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">DERL2_1</name>
        <name evidence="8" type="ORF">MHBO_000972</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Endoplasmic reticulum membrane</location>
            <topology evidence="1 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the derlin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000200">
        <property type="protein sequence ID" value="MES1919106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035243">
        <property type="term" value="F:protein-arginine omega-N symmetric methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007599">
        <property type="entry name" value="DER1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11009">
        <property type="entry name" value="DER1-LIKE PROTEIN, DERLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04511">
        <property type="entry name" value="DER1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="172"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="27191" checksum="2CB0B36279D414A7" modified="2025-10-08" version="1">MSSPQEWFKSIPTITKTYMVSVFAFTFADSVNLISPLQIYLNYDLVFKNYQFWRIITNFFFFGKFGFNWLINIYLLYTHSSALELNYFNGENGVPEYLFVLFFCASICLSIALSFPFLGLYFLSQSLVCSILYIRTRKEPFSRVALFGFVISNWQLPFMYIFLDILTGQSPIHSFMGIGIGHIYHFLVDIVPKVYGVNILRCPSFFYKLFSKSPSSVFRDSWFNRGRGYRLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK2</accession>
    <name>A0ABV2AHK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000213">
        <property type="protein sequence ID" value="MES1919161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="197" mass="22596" checksum="BEA0394AF8E42F8E" modified="2025-10-08" version="1">MSIQCLHNPKSNPFVVKCDEKNQFVLADSEKIFSESFYKQHCDAKCVLDDLRAILHPSIDENCGKEYFSEGDSCQVFCANQHTTFNFKSPVKSTIVTCKEDWVYNLNGHENVFEKIKDDQNFACVDNLDCIETLPFIKNADSEKIKYCYNTRNKSTCKIVCRNNYKFYGDHPVCNEGVWNSKTSFCLSKVSPGFAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI65</accession>
    <name>A0ABV2AI65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001196</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000262">
        <property type="protein sequence ID" value="MES1919348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13287" checksum="3AC5F5129609C129" modified="2025-10-08" version="1">MMQYLSLEEGDEVRIELKRLRKLNYVKISPKNSAGKTLLDRPDTKALFLFPIQFGTRAAEVHDVNSRQHDPAFLRGRKVFFRDSGDLPVDRQTAGREHSGHGSQSRLLLQRNRQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE2</accession>
    <name>A0ABV2AIE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hsp70 chaperone ssa4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SSA4</name>
        <name evidence="3" type="ORF">MHBO_001261</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000285">
        <property type="protein sequence ID" value="MES1919423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="entry name" value="Substrate Binding Domain Of DNAk, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="HEAT SHOCK PROTEIN 70KDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00301">
        <property type="entry name" value="HEATSHOCK70"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), peptide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00297">
        <property type="entry name" value="HSP70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00329">
        <property type="entry name" value="HSP70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="426" mass="46412" checksum="D327C7130B6EBEBC" modified="2025-10-08" version="1">MTDKKAEGPCIGIDLGTTYSCVGHFVNGKPEIIANDVGERTTPSYIAFTEEERLIGRAAKNQANRNPSNTVYDAKRLIGRTFNDPNVQNDMKTWPFKVAAKNGVPVIEVNHQKKTQQFRAEQVSAMLLGYLKDVASKKIGQEVKNAVVTVPAYFNDEQRKATKDAGKIAGLNVLRIINEPTAAAIAYGLDKKSDKEKTVLIFDLGGGTFDVSLLAIDDGIFEVKATAGDTHLGGQDFDLKIVNHLASEFQRKHKKDITKDKRAMRKLITQSEAMKKTLSSNKQAHVDIDSLHDGIDFSSSITRAKFEHLCQEDFAKCIGPVQQVLRDSKVDKARVDEIVLVGGSTRIPKIQEMIKSFFNGKEPCHSINPDEAVAYGATVQAAILSGTGGKATSDLLLIDVTPLSLGIETAGGIMTTLIPRNTTLPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF3</accession>
    <name>A0ABV2AIF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NodB homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000182">
        <property type="protein sequence ID" value="MES1919027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.370">
        <property type="entry name" value="Glycoside hydrolase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050248">
        <property type="entry name" value="Polysacc_deacetylase_ArnD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10587:SF137">
        <property type="entry name" value="4-DEOXY-4-FORMAMIDO-L-ARABINOSE-PHOSPHOUNDECAPRENOL DEFORMYLASE ARND-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10587">
        <property type="entry name" value="GLYCOSYL TRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="Glycoside hydrolase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="60"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="29386" checksum="133243CE0F846B3E" modified="2025-10-08" version="1">MDWYFIVAVIVSILIILSILIFFLVIFYGLKIYSFFLPNSVVCNFDLTLNEKIGNPHHKKFVSLTIDDSPSIYTEHILQILNEHKAKATFFLIGSFIENREETVKKILLNGHEIANHMFKDRSSLKLKFEEFVDKMNLTQSIIDRLKDNDEKMEKKWIRPGGGFFNKSMLQYFGKNKTLTPVLGDIYPFDAQIKSKFIIKNTILKRAHNGGVIILHERKWTTSYLDEILTCLNKNNFECTTLSKMYKISKNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN7</accession>
    <name>A0ABV2AIN7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000265">
        <property type="protein sequence ID" value="MES1919359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1090.10">
        <property type="entry name" value="Cytosolic phospholipase A2 catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10728">
        <property type="entry name" value="CYTOSOLIC PHOSPHOLIPASE A2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10728:SF40">
        <property type="entry name" value="PATATIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="FabD/lysophospholipase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="32175" checksum="9D683F0161DFF0A7" modified="2025-10-08" version="1">MPIIAILARYPNENSHTEELVEITTKNVNFEETKVSMDVDAFGRKFQHGVTVGKGYKVFLSKIMAISGSFYGIKGYEAVGFTCLSKWFIDILKSLPNDTLNELKVVNSPRIPNPFFKTTEQNIEEHLLDQNISSLEEIEVVDYGCISSLTVNPALRRNCSVIFITVTCALNTLSDYQKSIGKFVKKYKEKTKFEFPRSFLDKKVDELNYEKEDNFIFESENSLVIVYGSNFDLEGTKDYSFLKMLYEEKEFESLFNLGKSHVNKTINMVASRLSKFIKRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW5</accession>
    <name>A0ABV2AIW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001419</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000344">
        <property type="protein sequence ID" value="MES1919621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="838"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="838" mass="91785" checksum="E11FF8C7126CE426" modified="2025-10-08" version="1" fragment="single">MASEHLRSAERDMLDGKFNLATDHLQNFSSLTGMSVQKLDKGYFGGSKIKENTKYIRDTIQNYNTYTVRKYMGEASKRGLFQQIDRYAQLLDMANKASVTESASIEVSALLSKMTAKMKYMDSPKGISELDVAKFNDIERRHSDKKMIVDEDIERILLDYSSRIDAGKFVKNIAGGGAGALLSAIDLGADIISFASDKPRLEVTKYFMDKMGVDQNSWAYFGGELSTFAFGSSIFKALEAVKGGQSLAVALSAFDQVNPFATIFEKYLTASALYATGGAFGYATKKIVDNIDITQNRRDVAPSLGGALGMLVAHKSSLAENTGSTGRKMLFGSKPTDISTLEFPREGSKKTRFNVGEKEFSINKEGAPVEETGYKAKPSESSKTIDEGMIASEQAMEEIYNNEKAFNDIFNKTEGTGTPSEQISGDTISETTVKNIPGESFEGAYIERGTNGSGTIKDVNISNIGKGSENSSKYNRKLSSDGTLESLTRDKNDIADVMDQRAQKLVDDARQGIEQPIINSDLSISATDDAIFIRNADNIMSAIVNSIFSEGLPISELDALIAERGGTNLLARMLKSEDLNMRALGTSILDIVGGIALDPGTNGQFINEYISKEIQAFNNAFFDGVGIDFNEVDVTKIRDKGETGNTAWDFAQEVKSGVRERFSQPFADAETSIDTFASGNPEGIESELSNMRNIIENLNEKGRPKKGAKKADGTVSQEPTLYYERVLKELSSDYNLGVEAQFVVEELKDILTLDKPNNLPGYKDSIGSRLFKVRSMLSRAGRMYEQNSLKESQAMTGAFGQFKEIILNPMSEAIENIVDKSTTKEVKTEYDSAMTGYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ48</accession>
    <name>A0ABV2AJ48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001126</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036224">
        <property type="entry name" value="GINS_bundle-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158573">
        <property type="entry name" value="GINS helical bundle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="38"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15762" checksum="9DFBE5B063539501" modified="2025-10-08" version="1">MLAEMLNKNGNELIEQIKESSWIPKYNTKLIAKIQNDLNSDHSKLKKQFEKIKRLEKEGENVEEYKATLSAKYCAMKQSIRCVVSYLFHSIAFNREEIFAATRSKTCFGKSGIICQTSQSKNCQQLKENIFQSTQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB8</accession>
    <name>A0ABV2AJB8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein eL34</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPL34A</name>
        <name evidence="6" type="ORF">MHBO_001293</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL34 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000298">
        <property type="protein sequence ID" value="MES1919463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.370.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00349">
        <property type="entry name" value="Ribosomal_eL34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008195">
        <property type="entry name" value="Ribosomal_eL34"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038562">
        <property type="entry name" value="Ribosomal_eL34_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018065">
        <property type="entry name" value="Ribosomal_eL34_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047868">
        <property type="entry name" value="Ribosomal_L34e_arc-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10759">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01199">
        <property type="entry name" value="Ribosomal_L34e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01250">
        <property type="entry name" value="RIBOSOMALL34"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01145">
        <property type="entry name" value="RIBOSOMAL_L34E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00035227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13127" checksum="9A3E089D68A26A67" modified="2025-10-08" version="1">MAQRITYRKRQPYRTKSNKIKPVRTPGGKLVAHYHKKKARGPKCGDCGTSIQGIKCLRPRQYHKLKKKDKTVSRAHGGSKCPKCVSQRILRAFLVYEQKQTKQNKLPKPKVNKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF1</accession>
    <name>A0ABV2AJF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001393</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000333">
        <property type="protein sequence ID" value="MES1919589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15740" checksum="A12A24096906A538" modified="2025-10-08" version="1">MSGVWKATILNNKGGRIVEKNGKKYLKTKMLWFLEDGMPPPRKIAYPIHSDFKVNKNGYRACWKNTPIGEWNGRSLFKKDSVMQRINYWGLRCHFLVYATFDYAIAFFVLLVAMLSGLQRISYLHKEHKTSKYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJL0</accession>
    <name>A0ABV2AJL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001611</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000423">
        <property type="protein sequence ID" value="MES1919856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="22351" checksum="AC033317FCC6E986" modified="2025-10-08" version="1">MVETEYKKSKIVIKSKEENIDFSSKTNIPNIRNQIEKDKTPNKTLKKIFSFKDDLNNWCKYDEELFKRLKPYYIEKNKLNKNIVVKSKEEKIAVLAQTNNPMIRNQEVETLNKRLKKNFDFKYDLNNWFKEDEELIKRLKPYYKERKEINELKLINKDISELHLDIKIGTNILKDDSNDNMNKQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM0</accession>
    <name>A0ABV2AJM0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000430">
        <property type="protein sequence ID" value="MES1919878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="35"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="12744" checksum="596A66284B8AA746" modified="2025-10-08" version="1">MYRLEYILTPLILFIAIFVVLVTLHCYCYRRTQTVNNNNNDDNNDNNVNNQFQGEAQKSKSRNSQNNSNDMNLHKDDGNNQSKNHEGDINSNTDFSDRNCDINGQNEIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN1</accession>
    <name>A0ABV2AJN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SURP motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001629</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000430">
        <property type="protein sequence ID" value="MES1919877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.790">
        <property type="entry name" value="Surp module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000061">
        <property type="entry name" value="Surp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035967">
        <property type="entry name" value="SWAP/Surp_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01805">
        <property type="entry name" value="Surp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109905">
        <property type="entry name" value="Surp module (SWAP domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50128">
        <property type="entry name" value="SURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SURP motif" evidence="2">
        <location>
            <begin position="129"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="221"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="65"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="274"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="316"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="329" mass="38305" checksum="E6279609EB199DED" modified="2025-10-08" version="1" fragment="single">MLKHNFKGLTDKQLEAAQKETAKIEADAQRAEDQRKKDEFSKRKKRLLEQRKLMRQQSKNRLEKQNSTPKQNSPNDENKTENKTENGTENSENFEKELIAKIGQNKFQTLQKLDQFEFEEPLNDEKIKMIKNLSQFVFKNGFDFEQVVLAKNGNSFQWLQIENSEEYRFYVWNLVRKIGGLSENFSRRFVSEKSSPPKIFSENEQNMDDLDEQENTKNFSRKNFGRSYSAAPPPPSLISGKIESSRTKVRPHMFSVIGVNRENRKNGERRKRRFSEAPEKGFGKRSESDKRSQIDFYAARADASDQRKVVPEPPALLSDSSSNSDSNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJP4</accession>
    <name>A0ABV2AJP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001643</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000436">
        <property type="protein sequence ID" value="MES1919892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12931" checksum="0D865C29A3D0EFCD" modified="2025-10-08" version="1">MGFNRTYLNILKTNIGVEMFIFVGLFISTGHFQLFFRMNILSASTIAFFSLYMAGCYYFIYRYKTSKRHKTYMNIISIPLIYLIIQSGFFNKFYYQNSTFCQFLFLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT6</accession>
    <name>A0ABV2AJT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001681</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000449">
        <property type="protein sequence ID" value="MES1919937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="547"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="547" mass="63863" checksum="8C18CBBBFCC17FF5" modified="2025-10-08" version="1" fragment="single">MKCSFDETKSFCYVAPISKSRKSRKKINNRNLGKINKFRKICDRIDEIYTENIENFQFLEIDSFLKNDSGKNFELNTVAFIETGLLKEDTKLQVKKLKNYLKNSPKNILVTIDLSSHNNLNHILKTILAKFEKIFKNLTFESFENCSFSRNLEIILKQNEILKNYHLIFAINTNAMSKIADFSQKIELLKSLLFNLLNLSAKTDFSKISFLVFLSSFENLRIFDFGFLEKIYPQKFSLSQNSNLAILNKTFFDIFANLNFANCLNGHSTLINSDDFKEINLFFRKCSFSLDFALKTLKFYFYCNLNNKRNLQNTKLVKEKINEKIKALKDIFEIFSVFKXXXXTQNEFFDLDFVNISTKLNNLIEKATDSQIKQLSKTLKFEKFDEMSLKIKTNKTSNDSYNSKKLSRRQLIEKNIAKTNNHEMGNFKSLLSKVANDYFADFKNLDSFFAKDFQTCKNMILPDNRKDFIEGIEKLVIKQPRKNRIAKITKCLTKTLRSSENENIVTEDIFAVLKQIDKSVTKAEFEDAISILENIQLISRKKKSVPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK97</accession>
    <name>A0ABV2AK97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001558</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000401">
        <property type="protein sequence ID" value="MES1919793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6312" checksum="216F9B02108DDAEE" modified="2025-10-08" version="1">MTFDIPGIAIIIQMKPFVFVTNISASIGIAVSATDNAYFGIISAILKAIEDMRLVVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB6</accession>
    <name>A0ABV2AKB6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000439">
        <property type="protein sequence ID" value="MES1919904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="13410" checksum="7DC6298291B5B2EC" modified="2025-10-08" version="1">MTIGCLGSKLQKKLNKSVKLQMKELGFHGLKDFCLRYKNYFEFKDEFAFNPLIKCKKNENDKIEQNLIAIWSYKDELRYINFWKQCKNDPILNFENGTFSNHFDNKVIKPEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF1</accession>
    <name>A0ABV2AKF1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UTP25 NTP hydrolase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000529">
        <property type="protein sequence ID" value="MES1920146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036910">
        <property type="entry name" value="HMG_box_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010678">
        <property type="entry name" value="UTP25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053940">
        <property type="entry name" value="UTP25_NTPase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12933">
        <property type="entry name" value="ORF PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12933:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 25 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22916">
        <property type="entry name" value="UTP25_NTPase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47095">
        <property type="entry name" value="HMG-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UTP25 NTP hydrolase-like" evidence="1">
        <location>
            <begin position="87"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="19931" checksum="61956994732E607A" modified="2025-10-08" version="1">MQTKKKLSIAKSEDLASLPTEYILYIDEALKTQKHFSETNLSKKLIRKWTDVHEDDKEYFRDPYHKLIFPFLEKRKDLYVPLAPPPVSVAVSEAILLHCVNHVLKSTARIRKNNKRLSESKPDEKFSGQQYQFLDQGFTRPKVLLLAPFQSDAYDLIETIIRIVPDSQKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH4</accession>
    <name>A0ABV2AKH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001691</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000454">
        <property type="protein sequence ID" value="MES1919949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15096" checksum="C9D5BEE6A2740C3F" modified="2025-10-08" version="1">MVRDFENIKSNFIDYAAASFFTFVVLFSFYRRANTVNQIYLLKPLNVNKNDFRNHKLILQKKSMKFNFNIKDLKITKGNSLNVRYFAFRGPNREFFVARVKDTESAKKGIDFLEKMSEMNKNPNMQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH7</accession>
    <name>A0ABV2AKH7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001722</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000469">
        <property type="protein sequence ID" value="MES1919989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10186" checksum="8D556E18F3BDCE17" modified="2025-10-08" version="1">MIKTNKDFRKNILKAIFQNFLEICEDQKGLNFLEKIGILLTNTELINLHKEIGHYLEILMQSKDIEYAIKKITNGSGTFIRNLFKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL8</accession>
    <name>A0ABV2AKL8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ESF1 RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001762</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000484">
        <property type="protein sequence ID" value="MES1920034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039754">
        <property type="entry name" value="Esf1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056750">
        <property type="entry name" value="RRM_ESF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12202">
        <property type="entry name" value="ESF1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12202:SF0">
        <property type="entry name" value="ESF1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25121">
        <property type="entry name" value="RRM_ESF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ESF1 RRM" evidence="2">
        <location>
            <begin position="52"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="22"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF25121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11666" checksum="402A487FA630426D" modified="2025-10-08" version="1">MAKKSTESDENVSENTSESDENELKIEKHLTENDENGYENDENKLKMEKKSTNKIAVVKQDWSVLRAVDVLAILSSCLPSRNFIKSVVVYPTKYGLKRMKKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKM2</accession>
    <name>A0ABV2AKM2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rab-GAP TBC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000451">
        <property type="protein sequence ID" value="MES1919943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.270">
        <property type="entry name" value="putative rabgap domain of human tbc1 domain family member 14 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.750">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000195">
        <property type="entry name" value="Rab-GAP-TBC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035969">
        <property type="entry name" value="Rab-GAP_TBC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050302">
        <property type="entry name" value="Rab_GAP_TBC_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47219:SF9">
        <property type="entry name" value="GTPASE ACTIVATING PROTEIN AND CENTROSOME-ASSOCIATED, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47219">
        <property type="entry name" value="RAB GTPASE-ACTIVATING PROTEIN 1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00566">
        <property type="entry name" value="RabGAP-TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00164">
        <property type="entry name" value="TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47923">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50086">
        <property type="entry name" value="TBC_RABGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rab-GAP TBC" evidence="1">
        <location>
            <begin position="79"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="225" mass="26371" checksum="F2B40EAC88370776" modified="2025-10-08" version="1">MTKQKALKEISTKSKLKAQKLANERHLKWLEMIFGKKSIRSKANTNVETIECDEFALIRQESDPKKFCHKKMRSRIRKGIPSQFRRVIWQHLSGSFITKLDNPDLYGKIIASKKMSPVIFQIEKDINRTYQSGSFSREYEDRFSKSIFNVLNAFSLYCSEIGYCQGMNNICALLLNIMTEEDAFWMLVSLADNPLYSMRGCWKENMPSTKLRFYQLVRILAFTIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS7</accession>
    <name>A0ABV2AKS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001779</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000494">
        <property type="protein sequence ID" value="MES1920054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="176"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25799" checksum="65951152662BA98A" modified="2025-10-08" version="1">MGDCIAFSNDSEYRLLEENKIVENVFLVCNNNFDPEKKTAVVKKPCKVPALEISDSLDYSMCITDSKNEIYFGKCQVKTMENFFIEKNRKILYKEDIICSDSGVSSVTKIEVHKITNQCNLEKIDNGSIKEGCIKNGNCFYYCNFFYVSEQKTREGFSVCLSTGFNQMPKCSKNTWYYVVFISFPILFLVVIGVISFLFTNRKKKKTKKSISDEPDFEILEIES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKV9</accession>
    <name>A0ABV2AKV9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001994</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000604">
        <property type="protein sequence ID" value="MES1920311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="58" mass="6283" checksum="CCCE5C097D2C13C6" modified="2025-10-08" version="1">MTFDIPGVAIIVQMKPFVFVTNISASIGIAVSATDNAYFGIISAILKAIEDMRLVVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY3</accession>
    <name>A0ABV2AKY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000517">
        <property type="protein sequence ID" value="MES1920114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11578" checksum="BBF84D5D5858A1E9" modified="2025-10-08" version="1">MTRTFAGPICVESNCKFGLCEITNAYLDRVACDAPIYMNYTSAIEECCLCEECEGISFVGMQFQPRAGLLREGGPEGVATVMRIYRLFLNFKIAQLCLQNSKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL09</accession>
    <name>A0ABV2AL09_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rad21/Rec8-like protein C-terminal eukaryotic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002036</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000629">
        <property type="protein sequence ID" value="MES1920358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.580">
        <property type="entry name" value="Structural maintenance of chromosome 1. Chain E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006909">
        <property type="entry name" value="Rad21/Rec8_C_eu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023093">
        <property type="entry name" value="ScpA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04824">
        <property type="entry name" value="Rad21_Rec8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rad21/Rec8-like protein C-terminal eukaryotic" evidence="2">
        <location>
            <begin position="248"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="297" mass="33716" checksum="C95B0C65E900D048" modified="2025-10-08" version="1" fragment="single">ELHVHEDEQMLDNALDVDGSDVEMPRRAQSIENAEFGEISQERIRFGDKSVPSLSPPDLRRDISLEKQHNLRRKLEFVKKKNFLRFDKKIELEKSKIENDCDRETPEEEETLFFDAENVMTRPFLLPALQSSLFGLFDKFSIAKTAKDALPPSKKNKVLDDTNKNANSAQTHFAEDELSIDFAGFSISPERENSVQNSIQSDIGDRDLSGLNESTNALFSSPLKSKLEAENAVKGKRSKMLIDKIRKAEKTTFKKIAADSSRKTTAGVFFELLCLKSRSLIECEQKEIWGEIVVTVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC4</accession>
    <name>A0ABV2ALC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AMME chromosomal region protein 1-like</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">AMMECR1L</name>
        <name evidence="2" type="ORF">MHBO_002103</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000669">
        <property type="protein sequence ID" value="MES1920435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.700.20">
        <property type="entry name" value="Hypothetical protein ph0010, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.150">
        <property type="entry name" value="Hypothetical protein ph0010, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023473">
        <property type="entry name" value="AMMECR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036071">
        <property type="entry name" value="AMMECR1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002733">
        <property type="entry name" value="AMMECR1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027485">
        <property type="entry name" value="AMMECR1_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00296">
        <property type="entry name" value="TIGR00296 family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13016:SF0">
        <property type="entry name" value="AMME SYNDROME CANDIDATE GENE 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13016">
        <property type="entry name" value="AMMECR1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01871">
        <property type="entry name" value="AMMECR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143447">
        <property type="entry name" value="AMMECR1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51112">
        <property type="entry name" value="AMMECR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMMECR1" evidence="1">
        <location>
            <begin position="7"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="24474" checksum="FAE96C76CFC85CB7" modified="2025-10-08" version="1">MSEPKISVKRSPKNNSNLNALCFDSILNYFDNSHKIDDSLIKENSDNSLFVSWKNDSSKKKELKGCTGTFQSKNLLHSLKSVSVRSAFFDSRFKPIQKKEIKHLLCEVSILSPFEKAKDFYDWKIGKHGILIVFKKDDNSYSATFLPDVIKEQGWNHEETIKNLIRKSNFGGSYKDVWGDLQIFKYQSEKSSLNFDDYCALKKERGADIKSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC7</accession>
    <name>A0ABV2ALC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002146</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000693">
        <property type="protein sequence ID" value="MES1920481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.200">
        <property type="entry name" value="Translin, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016069">
        <property type="entry name" value="Translin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002848">
        <property type="entry name" value="Translin_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036081">
        <property type="entry name" value="Translin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10741">
        <property type="entry name" value="TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01997">
        <property type="entry name" value="Translin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74784">
        <property type="entry name" value="Translin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7474" checksum="EC0392CB1B9B9E94" modified="2025-10-08" version="1">MRLAINSVALKDKGTPSKISNFMNELYSLFLGIDSGEISDLAKKMNTMRQSVLKIETVCYEMKLKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU6</accession>
    <name>A0ABV2ALU6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">AMP deaminase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002284</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000778">
        <property type="protein sequence ID" value="MES1920631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006329">
        <property type="entry name" value="AMPD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11359">
        <property type="entry name" value="AMP DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11359:SF0">
        <property type="entry name" value="AMP DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19326">
        <property type="entry name" value="AMP_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="Metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="149" mass="17321" checksum="C119A0D41A12CAE7" modified="2025-10-08" version="1" fragment="single">HGILLHKTPLLCYLYYLSQIGLSISPLSNNILFVRHKKHPFPYFFRVGLNCTLSTDDPLMIHFTKDPLIEEYSVAAQIWRLSKTDLSEIAANSVYQSSFDERIKAKWYGKNHGRYKINKSICAKKNLSAIRIAFRKETFDEEMSYINGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM00</accession>
    <name>A0ABV2AM00_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002321</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000798">
        <property type="protein sequence ID" value="MES1920673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="287" mass="33510" checksum="5831E1D386C0816C" modified="2025-10-08" version="1">MASEEIEDFIKVNYDKFSPRMPFSFNVSKTHIEYSERDKLTAEKIFHVGASLPFIFQLGEESYCSKLRCYVRKTNLNLCNRSFRKTKSSLKLTDYGRIFLQISVLIRILVSRKLYFVDEIDLNNTVNFDPSGAIIFNLIQCEFVENPNHGTIDQLCFFLFRSLNSLFENFKTPNFYENLQKIRKSLINGTNLLNSLFTNNIFGNFIFLFGLNVENYFYVFDDSDVSSSVSHLDENGHTVHSGNRTYKVRCFRKNSESISGFITDHYSDILKNVEDWNFVYVIYSSTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM13</accession>
    <name>A0ABV2AM13_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GDP-L-fucose synthase</fullName>
            <ecNumber evidence="2">1.1.1.271</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">TSTA3</name>
        <name evidence="2" type="ORF">MHBO_002107</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.271" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000671">
        <property type="protein sequence ID" value="MES1920438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050577">
        <property type="term" value="F:GDP-L-fucose synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.25.10">
        <property type="entry name" value="UDP-galactose 4-epimerase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43238">
        <property type="entry name" value="GDP-L-FUCOSE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43238:SF1">
        <property type="entry name" value="GDP-L-FUCOSE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16392" checksum="405E58D2189E8D03" modified="2025-10-08" version="1">MIHNGPPHHSNETYSYAKRMIDVLNRAYNKQYGRKYISVIPVNIYGPHDNFNLEQAHVIPAIIHKCFLAKKNGDSLKLSGSGKPLRQFIYSEDLAILTLYIVQSYEETSPIILSDNENNEHSIKTAADIIRNNFSYNKEIKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM47</accession>
    <name>A0ABV2AM47_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal protein L28</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002231</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bL28 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000743">
        <property type="protein sequence ID" value="MES1920574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.170.40">
        <property type="entry name" value="Ribosomal protein L28/L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026569">
        <property type="entry name" value="Ribosomal_bL28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034704">
        <property type="entry name" value="Ribosomal_bL28/bL31-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037147">
        <property type="entry name" value="Ribosomal_bL28_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13528">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13528:SF2">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN BL28M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143800">
        <property type="entry name" value="L28p-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="151" mass="18043" checksum="252A68EFF5A2772D" modified="2025-10-08" version="1">MQRVFVPKKWTPIPGEMYRKLTKLEPILKEKRMKKLPIIMEEELNIYGTDTQRRVLKIKKISNKKTLKKKVVLMPNAANKRIKSEILQFEMKVKMSMSAMKEIDDAGSFDEYILKTPEDKLRTAFAINLKRNMFRKKRMDQIYNEFAKKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB0</accession>
    <name>A0ABV2AMB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002431</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000869">
        <property type="protein sequence ID" value="MES1920796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="11174" checksum="DD0E562801CEA9DC" modified="2025-10-08" version="1">MVNSFEFIDPQIWKEYSEKIAKLEEKYQIEDAQIDEKDFSTMADESISKMEKALRNDLYFYYKTELNEKIFSENKNFVEDFYEKRKRSNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMC5</accession>
    <name>A0ABV2AMC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bromodomain and PHD finger-containing protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">BRPF3</name>
        <name evidence="5" type="ORF">MHBO_002462</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000896">
        <property type="protein sequence ID" value="MES1920835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15571">
        <property type="entry name" value="ePHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034732">
        <property type="entry name" value="EPHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050701">
        <property type="entry name" value="Histone_Mod_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793:SF107">
        <property type="entry name" value="BROMODOMAIN-CONTAINING PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793">
        <property type="entry name" value="PHD FINGER PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13832">
        <property type="entry name" value="zf-HC5HC2H_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51805">
        <property type="entry name" value="EPHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="4">
        <location>
            <begin position="18"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21637" checksum="218DDAD46A3D8E82" modified="2025-10-08" version="1" fragment="single">IKFYKNRNLKSCKVQKTPKKCDLCNRFGGAFIQIQSETPRFVHIACAIWIPEIEFDQNLAIAKNVEKTNFRRVFPCRYCIRTGGASIQCSSKCSTMFHPICGLFQGFFMKVIKIERKNVLLAFCKKHSCVVRKSDNKKLLKLSKLRSFEDEEKVRINFEKKIGYLKSDKIVIFDNLDKCLKRNHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMN5</accession>
    <name>A0ABV2AMN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002537</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000962">
        <property type="protein sequence ID" value="MES1920929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="18674" checksum="9CF3B57E74991787" modified="2025-10-08" version="1" fragment="single">MADYYFPDNHCSMLVIFLLDPFNTLKEHKINLKKLHEQTFKSIDVTFIDYGLDIKIKNFFENKYKNNLRYNMINKNDLIKNKVWERNCGKYIFITDGRNLKNLSVLQNKAKKFCTFSVFIIKYKIYFNYAKMTCREKYMKKLFSILSYKIYKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR6</accession>
    <name>A0ABV2AMR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Prefoldin subunit 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">YKE2</name>
        <name evidence="4" type="ORF">MHBO_002557</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prefoldin subunit beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000977">
        <property type="protein sequence ID" value="MES1920956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002777">
        <property type="entry name" value="PFD_beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009053">
        <property type="entry name" value="Prefoldin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21431">
        <property type="entry name" value="PREFOLDIN SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21431:SF0">
        <property type="entry name" value="PREFOLDIN SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01920">
        <property type="entry name" value="Prefoldin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46579">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="64"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14897" checksum="2E86DF1610C41202" modified="2025-10-08" version="1">MATKQNKLIKKYDEILQQKLVLKNQEESINEYEHIISENKLAMREIKLNKHKAIYKQYGAVLVKQDEDVSVENLEKRINFIETEMKKLVTKINENVNKTKILERDFSEFRANLASGSKLNSADKNEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG3</accession>
    <name>A0ABV2ANG3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Asparagine synthetase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002527</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000953">
        <property type="protein sequence ID" value="MES1920918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01991">
        <property type="entry name" value="Asn_synthase_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001962">
        <property type="entry name" value="Asn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051857">
        <property type="entry name" value="Asn_synthetase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45937">
        <property type="entry name" value="ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45937:SF1">
        <property type="entry name" value="ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0061">Asparagine biosynthesis</keyword>
    <keyword evidence="3" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="305" mass="35101" checksum="683076FC87BEE3DE" modified="2025-10-08" version="1">MENIFMKKLNFFTLKNFVVAPELTCPKNFLEDKIKILTNLLKNELKKITKFLDDKKSIALLFSGGLDSIIGQLSSNVFIDLINVSFFKKQNIEEKNGCHINIEAPDRITSINGLIELKSLFPLIKWRLICIDVTEKMVSQKKELIKKLVFPKNDKMSLNIATVLFFAVNSVGNNNSFIVTNTPKKYLASKTCRYGVHFKKIVPKDRNIKNQFLGQSEVNLSGFGDIKKHTEIWKEIDFVKIGNEDICPEVFISGLGPDEYLGGYLRHRNIFENTKNKNLLKNEIDKDIDLLWSRNLGFRTKYLLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR6</accession>
    <name>A0ABV2ANR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">ATP-dependent RNA helicase ddx49, variant 3</fullName>
            <ecNumber evidence="9">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">DDX49</name>
        <name evidence="9" type="ORF">MHBO_002855</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010001234">
        <property type="protein sequence ID" value="MES1921312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050079">
        <property type="entry name" value="DEAD_box_RNA_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959:SF24">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE RHLE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="8">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="33"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="7">
        <location>
            <begin position="234"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="403" mass="44391" checksum="5FAEAF0FC9BF1369" modified="2025-10-08" version="1">MAEFEKLGVASFLAQNCSNLGITLPTKIQEKAVPLIFNGKNLLGQAKTGSGKTAAFALPILQRLSEDPYGVFALVVTPTRELAQQIADQFRVFGVGTNLNDLVVSGGRDLIKERLALSEKPHVVIATPGRLAEHLKNGIENCRSLAFRLFSRRSESCFGSTPSAVEKVPAQKFRQTLLFTATLDAKTAHIAESKKDKIELIETSDESPQAVVAELETFFVLAPRAVKECYLFSVLTRSHLKQSVIVFVARKKVCELLTETLIQLEVEAVSLNSDLSQAKRLASLGKFRAGKARVLVCTDLAARGLDIPEVGLVVNYNVPRSVKDYIHRVGRTARAKKRGIALTIVTQYETEALEHIEAKTGKKIDPFKAIEPEKEILKCLHKVSTAKKIARLRLAQYAIKNNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT2</accession>
    <name>A0ABV2ANT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002701</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001096">
        <property type="protein sequence ID" value="MES1921119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8224" checksum="B313CA2DF56DD2FB" modified="2025-10-08" version="1" fragment="single">GSKRVYDYVFGEKFAYSPAEDRRSIKIFDLSTENKLSRVVKSSSHNNTITNSTTIKLRNVIKILLLGFLKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV2</accession>
    <name>A0ABV2ANV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001271">
        <property type="protein sequence ID" value="MES1921355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF388">
        <property type="entry name" value="NEMATODE CUTICLE COLLAGEN N-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="88"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="118"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="203"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="26371" checksum="8AD227E1502658DC" modified="2025-10-08" version="1" fragment="single">MSKVSFNNDYDCAEKRYFNIRIPLPPHARPGVPGRPGAPGAPGAPGKTIVGPSGQRGPTGAPGKPGMPGSPGSQGLIGLVGPRGATGQPGQPGRSGMPGRPGMPGQAGCPGMPGRSFSHFEAEESLKERTGDRSISRHHRFGDDEDEDSFFERIAEKIEERLAHKNRRRRMYEYEDSDDGVRVPRNISRRNRNYSDDEQEEVLLERLAMRFDDKNSDDSEENDRERIGDRIEERFDSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP10</accession>
    <name>A0ABV2AP10_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002938</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001321">
        <property type="protein sequence ID" value="MES1921407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="109" mass="12543" checksum="D2D75DA86825EB28" modified="2025-10-08" version="1">MTVYLTKTILGGFGLTLTAQKIKNTNKNYMMSKVESHDPILVSTETRNSIEKFLNYIRNGSLIMTYVRFLRDTKDFVIKSKYFIPFVSFAAVIFVFTVISITVQLVRSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ03</accession>
    <name>A0ABV2AQ03_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003268</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001700">
        <property type="protein sequence ID" value="MES1921739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="22"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="321"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="361" mass="42680" checksum="28ECC6404BED6316" modified="2025-10-08" version="1">MATFSGTLDNTPDNTIEENIKNEKAEISKNFEKSLANNLQNENTKLSKQLELEKQKNKTLNELETKRTTELNEAVARLEKLKEQKERYENTNKQLETQIKSVDVAERKLIQDVETLKQTNEKLEQKINTLEKETREKTVKISELENEFVLLKRILQNVSKKKCEDNKNHTSKQRDLDRKIEELTENLGFANKRIVELEIKLKEKGDFKENEHEMKNVKGEGNIHDIIKSLNEKLKQRQDRNEEHIDLNDLIESQILDDSTKFLAAETAKMDIDRKLKNLDECLYMTRWLRKELRDDQTEGRVQGEIIFYEDGQEAKKPINTENLQNLERSIERDIEEQKNKLEMIEKIKSSIESEKKILYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ72</accession>
    <name>A0ABV2AQ72_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003359</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001815">
        <property type="protein sequence ID" value="MES1921823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054076">
        <property type="entry name" value="ZUO1-like_ZHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044634">
        <property type="entry name" value="Zuotin/DnaJC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43999">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43999:SF1">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21884">
        <property type="entry name" value="ZUO1-like_ZHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="29"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20730" checksum="831400D3D0E10C2C" modified="2025-10-08" version="1" fragment="single">MTLVLSDIRKLNLNDRSRISDFCSSSDGDFYDLLGIPDKRRIATEREIQIACFPFSISDRKKSLRFHPDKAKQCSDSEKAKIHSLYVEIQTAFETLIDSTKRRIYDSKLSFDDSLPETSLVPKENFFPTFYPVFERNSVFSVIKPVPLLGDENTHIDQVFRFCEHSIFYRTCLMSDFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ89</accession>
    <name>A0ABV2AQ89_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Protein kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003377</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001842">
        <property type="protein sequence ID" value="MES1921840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="189" mass="22154" checksum="01441F44B9D91A28" modified="2025-10-08" version="1" fragment="single">KIGTICIKNKKIKITYHKSNHLKTNKFKRPFGDKSRDLDKNVLNIEPRYSSKFFSPQAISLIKALLEKSPSKRLGSGPDGISEIKEHEWFNPIDFGLLENGYIDPPWKPSKKDFPQKHNRMSINNNRNKYKRIKIPEQFHKKFSGFEYVSKKAIQLEIVEVLECLDRKGNLESETDRREKKNRDCCSVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQB2</accession>
    <name>A0ABV2AQB2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003259</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001687">
        <property type="protein sequence ID" value="MES1921729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045877">
        <property type="entry name" value="ZFP36-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12547">
        <property type="entry name" value="CCCH ZINC FINGER/TIS11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12547:SF18">
        <property type="entry name" value="PROTEIN TIS11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="71"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="109"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="5">
        <location>
            <begin position="71"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="5">
        <location>
            <begin position="109"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19773" checksum="FC57D4F3129E8E8C" modified="2025-10-08" version="1">MSSLFFSNEFKNINIENAKTSSLMKEMQGYKPKTYYNASEPTYTENDIISLNMEYGLNSKSRMDDKCKREMYKTEMCENWVQKGYCIYGSRCKFSHGMTELREKLRIKNFKTKPCVDCAKRGIICAFRSRCNYAHPGEYLRYKFGASYFDREYEFKTNGKVDRGVYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF1</accession>
    <name>A0ABV2AQF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">U2 snRNP complex subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">LEA1</name>
        <name evidence="6" type="ORF">MHBO_003429</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the U2 small nuclear ribonucleoprotein A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001912">
        <property type="protein sequence ID" value="MES1921898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044640">
        <property type="entry name" value="RU2A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10552">
        <property type="entry name" value="U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10552:SF6">
        <property type="entry name" value="U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14580">
        <property type="entry name" value="LRR_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="25611" checksum="1A71435E3410614E" modified="2025-10-08" version="1">MRITQSLVQNAHTRLNVMGEFEISLRGLNITAIENFGLTKNLFFSIDLSHNSIQILENFPRMENVKSMFLNCNNISVVSPSLGLMLPELKILVLTDNKISDLKSIENISKFDKLEHLSLVENPIRRVKEYRLYVIWLMPSLKSLDFRKISNAERKKAKERFRKSDNKENERSEKTEVLTAKEKKILKNAIKNAKNIETVEKIGTILNRGCLMEGERIEDFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF9</accession>
    <name>A0ABV2AQF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003123</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001526">
        <property type="protein sequence ID" value="MES1921592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8308" checksum="738A77114AF17D55" modified="2025-10-08" version="1">MNITIKNEFKSKLLKTNEKPKFHQKKERIRELASKGIKILETILKNNPEKSMKQLCTVSKEKFEENFSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS3</accession>
    <name>A0ABV2AQS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003511</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002032">
        <property type="protein sequence ID" value="MES1921987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046003627" evidence="1">
        <location>
            <begin position="18"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11842" checksum="F8E61D651F12BF94" modified="2025-10-08" version="1">MLKIVLTMLIFSLQQQTIDINKLLSEGHYEQIKREYMEVDEETKKMYLSSLKSIRNAMNDSPMKTELTKFVDELENVSADLYENGDFGNFISIFSFIVFQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX2</accession>
    <name>A0ABV2AQX2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SAM-dependent methyltransferase TRM5/TYW2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003585</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002168">
        <property type="protein sequence ID" value="MES1922066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030382">
        <property type="entry name" value="MeTrfase_TRM5/TYW2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056743">
        <property type="entry name" value="TRM5-TYW2-like_MTfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23245">
        <property type="entry name" value="TRNA METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23245:SF31">
        <property type="entry name" value="TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 3 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02475">
        <property type="entry name" value="TRM5-TYW2_MTfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51684">
        <property type="entry name" value="SAM_MT_TRM5_TYW2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="SAM-dependent methyltransferase TRM5/TYW2-type" evidence="4">
        <location>
            <begin position="9"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23443" checksum="E97B358E0697B8A3" modified="2025-10-08" version="1" fragment="single">MDKKLPKKYNILGDCLILPKNSNFNPEKILEKTKIKKIAIKQNIANNIRRSSQTKLIFGDSSEVVHKENGIFYNFDIEKTMFCTGNLTEKIRVTKLCHPFEVVADLYAGIGYFTLPFLVKSKVAKVFAFEINPRNLELNKIEKNRCVIVEGDNRITVKKTFYGIADRVNLGLLPSSKDGWISAINLIKEEGGTLHIHENVLISEKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX9</accession>
    <name>A0ABV2AQX9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PATROL1-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003589</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002176">
        <property type="protein sequence ID" value="MES1922070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057984">
        <property type="entry name" value="PATROL1_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25761">
        <property type="entry name" value="TPR_PATROL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PATROL1-like C-terminal" evidence="1">
        <location>
            <begin position="44"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="38295" checksum="371BE27E40108541" modified="2025-10-08" version="1" fragment="single">RILCCKYSNLCLGKERIKSFEDSFIKKVRNFTNNPDFTIVLNPITYQDRIDEIASVLAHRVVYTDLGDCLFNGEHYRRQSDKNLIRTNFNKIDEILENVFRDISSFVHIGKTVLPIFQAVFDVYVSAILWLLLGSKIHNFEKNDIKEIEADFEIFDNFKFENEPVVIDTFEMKSLKLILSYFGKNPSEIIDFHRAIFKKEKNPNWTKSEKLFKASQYVRNPCTACYLDTLEERLEVSSEGLLSIIEHLRDKSAAEYLKQFLKRHKSVLKKKKTSADIEIVMRKIMKDFEKIQKIFGMSDFRKEDFSVINVKKNLAILADLQNEKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ5</accession>
    <name>A0ABV2AQZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003613</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002211">
        <property type="protein sequence ID" value="MES1922098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12162" checksum="53338F0F166A1C5E" modified="2025-10-08" version="1">MEVGWASVLYSVDGQFSDTDGESRNEYAFKCCVCETESFQAEIDVCAEVCAAVCEGIPCESESLQATVVVLKNIAKGHILIITGAPTTIEAMTCHFRTVLKAPDKSTIVFSSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR11</accession>
    <name>A0ABV2AR11_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003626</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002233">
        <property type="protein sequence ID" value="MES1922111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8176" checksum="BB13ABC9D203A91A" modified="2025-10-08" version="1">MLMIMKSHCLSAIDYGCEAIIGSAKTNLDAIEATEHKSLTNSLGVSTTCARNESRALADFVPLKQRWAIRVFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR28</accession>
    <name>A0ABV2AR28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003639</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002254">
        <property type="protein sequence ID" value="MES1922125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="178"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="280"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="361"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="392" mass="44452" checksum="FB404EF48C21BB85" modified="2025-10-08" version="1" fragment="single">KTIDSQSLIHISEVENIKTIGLALGCEPNNIRSEAGIIDFIREFVAEILQRDRSVTDTFNLRETVADELARKNSEIHRLNGLLGLANNRYGDLNMENQQQSTIVARCLNKLNACIVNNDKRSHSRQLNESDIEATVDQVCADMTALFKSNERLTDEIGRINDRTDDSHNATNIKTAQLKQLKQSNRTLTKEKKTLIEQIRVVENNHDIELAAMKADNDRLNTDIANANAEIVKLVTEVGLKEKSIASHRSQLDGLLGRSTIIEGQLRESNVRCTSLLESNNVVNAELSKINELYEKLKIEYDRKQIDLTDESRALQEKFDNANKTVTDLQTRLRFALQKTAESEKKTTEFAQQISHTLDTNQSLNKTNVALKEKLKTKNDQYTTIYDELAEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR43</accession>
    <name>A0ABV2AR43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001975">
        <property type="protein sequence ID" value="MES1921944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="255"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="41971" checksum="82A7EAB8D4DAC892" modified="2025-10-08" version="1">MKQQFQNMFGNPFPRQSNFALADIHERRKFGESKNIKNHVNVRKIAFIKKRQNYLSFSTSKIRAQIKRSLQIFLLKEHYRNKRRNAIFLKNKNKQRKKNVLSFETKELRRNLLKNKIQRELIARNKRVRAENKVLLKRNFVGEKERKIGKIDKTCRTKRKKTILKKKVTNLIPFFCNTDKEISKQKFSFRKLKVERTETIIKKEEKTEKVIKKEKSTCANNMQNRTKKITEFPPFFCNTEKEALEWRASFRRQREERDTIIKKEETSCSEEHAGSNSTKRDLPETKHDSIIKEEREANSEETVANIGNRQLSNLQMLSNTELEKIDIDALTKWIGRMSISKKTKIAESDRFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARB5</accession>
    <name>A0ABV2ARB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003524</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002064">
        <property type="protein sequence ID" value="MES1922001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.400.10">
        <property type="entry name" value="GI Alpha 1, domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011025">
        <property type="entry name" value="GproteinA_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF302">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-5 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00318">
        <property type="entry name" value="GPROTEINA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00275">
        <property type="entry name" value="G_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47895">
        <property type="entry name" value="Transducin (alpha subunit), insertion domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0807">Transducer</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22724" checksum="093CAE7E6A178839" modified="2025-10-08" version="1" fragment="single">MGCEFSSITSSDRNEEFRHPRSVYRLLLLGPGESGKSTFIKQMVNRFQHGYPIEERKKFRMCVVENTLECVKTILRWSDRLYELEVEGTRTDPAKDYAKRALLETPATRQLSKETAELVKLFWRSDKGFMCTFENSWRYQLLDCAEYFLDRIDFIAEEGYVPSKEDVFHSRTVTTGVVDIEFRLEKSIFKIID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC8</accession>
    <name>A0ABV2ARC8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003438</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001923">
        <property type="protein sequence ID" value="MES1921907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036339">
        <property type="entry name" value="PUB-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143503">
        <property type="entry name" value="PUG domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="145"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="336" mass="39717" checksum="5569B9EBD1031881" modified="2025-10-08" version="1">MTEYKTKNKKIEDYMKIRAEIDSCLYNLAKEIPYEKLKKSFNLILLILQNAFIGKDKKKRSLKKSNSKIQNLLVFENFKRLIKILGFVEQSDEIILNTKNQNKFCDFGAYSIEYIKQINIENFIEQKVTTPNLVEREIKLITKAKTQKTEANPNSETDSDSETEKALLIQSFERKKAEFSNRFRRKQHKKEVKFDKTLIAIDFGFNIILKAYFSPKEKFIEVYKLLIEEVLNEDFVRKYNFVLSMSGRKEMDKDKTFEDLDIVPCGKFWLNYKKDLDFDGKSGNEDKSKLKIDFLVDKKYLKLLDRRGDSEIPEPLDFEEMSFDKIDAIADKFFAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF8</accession>
    <name>A0ABV2ARF8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L19, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003462</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bL19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001960">
        <property type="protein sequence ID" value="MES1921937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001857">
        <property type="entry name" value="Ribosomal_bL19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038657">
        <property type="entry name" value="Ribosomal_bL19_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15680:SF9">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN BL19M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15680">
        <property type="entry name" value="RIBOSOMAL PROTEIN L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01245">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00035376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="245" mass="29042" checksum="22EDDBBE0548DA6C" modified="2025-10-08" version="1">MLVKNLKIKNLIHQQNVFRSIRHFASKNEKFKKNRKSDRKRAAVNKIILDLKSEQNFDDLAKLPDPLPLDIYESSDSKNTHSYVKALREGSIRGTHEKKKNPEIFKMRYEEIVPNMPGREYHKQPTPQHFMKMLNDFEIRKMENRRIENFNAGDEIEIELKKHLPDGGIEKKKGLCIARRNRGYGSSFVLRLMGSNKEAFELTYPLYSPFIVSIKMLERHYSKKKKLLFMRDKKNFYLPAQTIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN5</accession>
    <name>A0ABV2ARN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003844</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002607">
        <property type="protein sequence ID" value="MES1922337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="25958" checksum="6BCBD95661CD6ACE" modified="2025-10-08" version="1" fragment="single">KIQYLDEIEEKNAEFTRKFLKAIYGKEEFKKGDIVKLKSKNSFEFGKISHFIVKEKRDGLVYYNSLPEKIFGNELFCKATREIVKGQSKSQLDKEYKTEEIRLLQNFPDELEFNFKTNEFVECNKPPLQKVETGYLFPDCYITIRGKSFNNEKGKILTRLRKKNKNMRLGVCQILQHYDMKTNSWKNDKKINGLNEHICSKMVSDKNRNMGIYYFNPAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY2</accession>
    <name>A0ABV2ARY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Prenyl transferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003937</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002775">
        <property type="protein sequence ID" value="MES1922426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12001:SF69">
        <property type="entry name" value="ALL TRANS-POLYPRENYL-DIPHOSPHATE SYNTHASE PDSS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12001">
        <property type="entry name" value="GERANYLGERANYL PYROPHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="285" mass="31390" checksum="06F469281853501F" modified="2025-10-08" version="1" fragment="single">MMLAENFGLSTLKSLSKKAISPENYIKAINRAKARNLASKMDALDINSNPFHLIKASLNEFTHNFTKIVSGQNPSLSAIMRHIVERSGKKLRPSITLLLSKALQNCSPTRSEKVARTADLADTNGLDYRGVFERQKRLSEIVELVHTGSILHDDVIDEADSRRGGESVRKRYGNKVAILGGDYFLAKASISLAILGDNEVIKLISSSIEDLVNGELIRIEIGDGFDLETVLNTYCHKNFLKTASLIANSCKSVAVLKGCDDETVENAFRYGKNLGLSFQIMDDVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS11</accession>
    <name>A0ABV2AS11_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003971</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002864">
        <property type="protein sequence ID" value="MES1922456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="71"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="297" mass="33796" checksum="CED8F29ED981C3C6" modified="2025-10-08" version="1">MRQSLIVLTQRLESEMHQNHSNAVNYRKRIEDLTSRNNMMEFNFKGLQKKIMLQTRKRETKDGAAPDGEVLEKRKRKLESTRLELDEVRKKYQRVLGENRHLKMAGDKWKHKGGAIEKPSVATLEKEIVIAKTLIEQIMVLKNHQNILCLNDSKNLDSPLIKPDITNIFQRLRKCCGQLENNLGDEKTVEMFLSRSEDDFAKETPKDGFTVSQILDKRVSPEGKTQFYVCCPVNPVLAREAVLSGAGPSPVSIEEGSDPGALCERVWVDEQSLVGCETLIEKFRSARSIEGAVETKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS68</accession>
    <name>A0ABV2AS68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003841</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002603">
        <property type="protein sequence ID" value="MES1922334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="9990" checksum="E59A1F15C8029088" modified="2025-10-08" version="1">MLDIVTIDHSSGYLPLSLTMNYVDGCPDSKELWDKAAAMKRCHEISNKCVGLFKDPRLEYHCLINPYNNATVEVCAPARRIFGGNHYAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA1</accession>
    <name>A0ABV2ASA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Charged multivesicular body protein 4C</fullName>
            <ecNumber evidence="3">2.1.1.309</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CHMP4C</name>
        <name evidence="3" type="ORF">MHBO_004062</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.309" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010003068">
        <property type="protein sequence ID" value="MES1922547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1060">
        <property type="entry name" value="ESAT-6-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22761">
        <property type="entry name" value="CHARGED MULTIVESICULAR BODY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="147"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="51"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20596" checksum="394B832DF93163BE" modified="2025-10-08" version="1" fragment="single">MNLFGKKKKKNNGKNKDSDKIVNTIQTLKSALDQISKREAHLSEQVNDGQNRAREKSRRGDRQGALFELRRKKLLENEINSMFGKRFNIESQILALESASGNQQVMAAMKQSKNVLEGMMKKTDVDEFAEVIDDTNEIMLNVEEISFYFFDFIFYEIFQLIFLTKIFRLIFLTKFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC2</accession>
    <name>A0ABV2ASC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003886</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002691">
        <property type="protein sequence ID" value="MES1922379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="7674" checksum="7A10079D6CAB91D3" modified="2025-10-08" version="1">MPLLMDIGKLDSYSFALDPPKTTDRKMCEIRLIGVTAGVIVTKGSWTGGEVIVSSGVCSKSVCVLQQTERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG0</accession>
    <name>A0ABV2ASG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003819</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002567">
        <property type="protein sequence ID" value="MES1922312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15648" checksum="DF3CBD4A9D2C6432" modified="2025-10-08" version="1">MPVELYPVKSCPEDADSWLAAGVKLKCPNDTLGRNLYQCAPNEDKTNLVEFCLKGSIGRHEEGNFSTCPFFQNSQLLPWISRWTFLTKLCVLSVVLSFHNGDIQCMETSIHIHTVYFVIIVMFTLVERSDGDSRLGSSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN2</accession>
    <name>A0ABV2ASN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003916</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002735">
        <property type="protein sequence ID" value="MES1922403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="5711" checksum="327DFB0B5188B8B3" modified="2025-10-08" version="1">MRESFQASTPVNPSGKTAPDRDSVVTTRISTEVCQSTMVDNPQNCEEMPKPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST1</accession>
    <name>A0ABV2AST1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004246</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003510">
        <property type="protein sequence ID" value="MES1922723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="200" mass="22794" checksum="58A1CD26B6FEFD0E" modified="2025-10-08" version="1" fragment="single">YEAEYEEGGEDYEPEDNEEEQPEEADNLYEIDGEKIPFDELKAGYQRQADYTRKTTELAEQRKALAALEGLGNILASDPLPQQEPQQEQRPEDPIEAMRWDIKQELIQELAPQLQNTQAQMQSMAQANAVQQTLAQFQSDPQWNEARAEIDVMLSEKMAKDGIHAANEYYAQLDANPKFFAQEFGTAKQRIAAKGKVKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ1</accession>
    <name>A0ABV2ASZ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Alpha-SNAP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004313</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SNAP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003726">
        <property type="protein sequence ID" value="MES1922789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000744">
        <property type="entry name" value="NSF_attach"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13768:SF8">
        <property type="entry name" value="ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13768">
        <property type="entry name" value="SOLUBLE NSF ATTACHMENT PROTEIN SNAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14938">
        <property type="entry name" value="SNAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00448">
        <property type="entry name" value="NSFATTACHMNT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="201" mass="23239" checksum="641CF73BDE42A760" modified="2025-10-08" version="1">MAQYYEKAIKIYKDKNSFSYVAKLHKEMGQSLSKTNKFESAAKHLNLAGQFYESEDQTVTSCNCFFDEAVCRANTKQFLEAAEIFEKVAQVYVQNKLLRWSAKDCLFSAFLCRIAIFQNLNISDFLSKYCDIDSNFASTREYEYSQKLVKALNDNDSEKFSDALYEADSKLKLDNWKVSILVSVREKIGENVQVQDEDDFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT89</accession>
    <name>A0ABV2AT89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004409</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003955">
        <property type="protein sequence ID" value="MES1922880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11580" checksum="550971AC1F6FA1CE" modified="2025-10-08" version="1">MILAKKAKLSFNNNDDFLEKLAEKSDSVFSEAEKLFSNSQNGPTTEEKFETDFSKLFDKIIPILKNFKNDSLVLAKVINLLSKGFNRCLKLYRNDSKKVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI1</accession>
    <name>A0ABV2ATI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transformer 2 beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">TRA2B</name>
        <name evidence="4" type="ORF">MHBO_004500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004186">
        <property type="protein sequence ID" value="MES1922969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050441">
        <property type="entry name" value="RBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48034">
        <property type="entry name" value="TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="65"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="67"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13700" checksum="E00E32097E5F7E3A" modified="2025-10-08" version="1">MSHRTTSRDLDEIFGKYGRIDNINVIKDHVTGESRGFAFIYYSDIEDAKRAREKLNGEEIHGRNIRTDYSISKQGHPTNRSSSRYDREPRGERRRRCLNFFLKLDYSRSRSRGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS5</accession>
    <name>A0ABV2ATS5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004521">
        <property type="protein sequence ID" value="MES1923065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="79" mass="8913" checksum="2F5E99C060F370EB" modified="2025-10-08" version="1">MGGLKASHLPLQTDNSYAPVLCIEISIQFALPYKHNKRGSQALYSKKGSQAFSIPTYTARGGRRPFQLRRTLQRNRGYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU37</accession>
    <name>A0ABV2AU37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004511</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004231">
        <property type="protein sequence ID" value="MES1922979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="19"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="12670" checksum="0593853AD9533EA9" modified="2025-10-08" version="1">MTKDYINHYGKRTQKFQEGGMAPAPEQMAPEGGAPAGPEGGDQGAEIQAAIQQVIQTQDPELALQVCNALGEMMGISGGGEGAPAEGAPAPGPEGAGAPMPEDTPMARRGIKTRRPVFSASIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU78</accession>
    <name>A0ABV2AU78_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">isocitrate dehydrogenase (NADP(+))</fullName>
            <ecNumber evidence="4">1.1.1.42</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">IDH2</name>
        <name evidence="12" type="ORF">MHBO_004762</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the isocitrate and isopropylmalate dehydrogenases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.42" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010005144">
        <property type="protein sequence ID" value="MES1923218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004450">
        <property type="term" value="F:isocitrate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.718.10">
        <property type="entry name" value="Isopropylmalate Dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004790">
        <property type="entry name" value="Isocitrate_DH_NADP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11822:SF21">
        <property type="entry name" value="ISOCITRATE DEHYDROGENASE [NADP], MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11822">
        <property type="entry name" value="NADP-SPECIFIC ISOCITRATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53659">
        <property type="entry name" value="Isocitrate/Isopropylmalate dehydrogenase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0521">NADP</keyword>
    <keyword evidence="9 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Isopropylmalate dehydrogenase-like" evidence="11">
        <location>
            <begin position="6"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1923218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19233" checksum="7302D9605F02C080" modified="2025-10-08" version="1" fragment="single">YASQDKVFESPGKLEMHFKNFKTGEKTKIDVFETNDQNSQICALTMFNSSKSIEGFARACFNLAVNKKWPLYMSTKNTILKKYDGLFKDIFEEIYLKEFKKVFDANKIWYEHRLIDDMVAFSLKSSGGFVWAMKNYDGDVMSDIVAQGYGSLGMMKSTLISPDGKTVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU90</accession>
    <name>A0ABV2AU90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DHX35_2</name>
        <name evidence="2" type="ORF">MHBO_004766</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010005158">
        <property type="protein sequence ID" value="MES1923222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011709">
        <property type="entry name" value="DEAD-box_helicase_OB_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF136">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX35-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07717">
        <property type="entry name" value="OB_NTP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box helicase OB fold" evidence="1">
        <location>
            <begin position="92"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18866" checksum="44A5FFF9EBE8C019" modified="2025-10-08" version="1" fragment="single">ILKIRQKTSSSYKQSLMENALKKFAVREGDFMTLLNVFNSFKKRPKDSNWCRSLYLNHSALKRALKIRKQILRIAKKLNLKIASSCGEVEPILKAIINGFSRNAAKLQNDGSFKSVNSKETKLMLHPHSVLSGSAPGWVVFDEIISVDQNYMLNVSVLEPKWLIES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH1</accession>
    <name>A0ABV2AUH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005596">
        <property type="protein sequence ID" value="MES1923314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="20951" checksum="4B2822C469806775" modified="2025-10-08" version="1" fragment="single">MDNRQKAKANLKRSLYFGGSISLAAGIAGVAVAVPTYLKIQDELQKNMTELSDLSKYVSQLTSKLGVSADSEFTQELSDGYTIAVINGKTQIYKSTGGKKSLIMNMNSDGTVGSAAEMTGLAAQKMLSLISEAKDIIGDEATAMDDILGPYVQEAEETSISIESKITGLSSDVIKARNALATNDADEKAQAISKLKAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM1</accession>
    <name>A0ABV2AUM1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004921</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005807">
        <property type="protein sequence ID" value="MES1923357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.340.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041588">
        <property type="entry name" value="Integrase_H2C2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17921">
        <property type="entry name" value="Integrase_H2C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase zinc-binding" evidence="1">
        <location>
            <begin position="54"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="17259" checksum="75FCF2583893493A" modified="2025-10-08" version="1">MIQDEYRIRSCVFQEQFWRLWNRLVVSHGTLCRPIINGDPEAEHLQFAVFSYLSRPIFMYFHDVSTGVHFVAEKTLDKTRILLYWPSMKKDIDEYCSQHDLFTAKKPLKASIRDSLHQYFVHEPVVRIAVDNKYILVICHYYNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS4</accession>
    <name>A0ABV2AUS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004732</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005035">
        <property type="protein sequence ID" value="MES1923186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5646" checksum="ABD44FB87C2FA247" modified="2025-10-08" version="1">MDAGEMNQKNQEYVINAIEVKLIDLLSHSVDLLSLVFVLVVRHPLIILNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW4</accession>
    <name>A0ABV2AUW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005014</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006213">
        <property type="protein sequence ID" value="MES1923442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9542" checksum="4D1F5525E9D40EF5" modified="2025-10-08" version="1">MREYVSIQHLFGDTVRDRNPVHDAALSDQDTEIAWDWDGLCEINVRSGIDPTIFLNHANFQVPHAVYNDEERLRKPDYWND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV27</accession>
    <name>A0ABV2AV27_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005107</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006624">
        <property type="protein sequence ID" value="MES1923523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7306" checksum="C49AB53E0549BFC2" modified="2025-10-08" version="1">MDAVTQFFSAEKLQDGNIKKAYIKSFPRILMVTLKLDPSANAIKMSIPTEISLNSFGLLHDDTGFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV86</accession>
    <name>A0ABV2AV86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">T-complex protein 1 subunit delta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CCT4</name>
        <name evidence="5" type="ORF">MHBO_004948</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005935">
        <property type="protein sequence ID" value="MES1923384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="entry name" value="TCP-1-like chaperonin intermediate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="GroEL-intermediate domain like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00995">
        <property type="entry name" value="TCP1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="17663" checksum="65C8210215F099D9" modified="2025-10-08" version="1" fragment="single">LVELSKAQDIEAGDGTTTVVVLAGALLEESQKLIEKGIHPNLISESLRRCAERVPLILEKISSPVSIDDDKSLTDVAITSLSSKIVSPESKLLAPIAVKAIKQAKDNDGNVDLKNIRVTAKIGGTIEDSKLIDGLVFDQSASRSAGGPTLIRNAKIGLIQFQLSAPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB2</accession>
    <name>A0ABV2AVB2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidylprolyl isomerase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005219</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007205">
        <property type="protein sequence ID" value="MES1923614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="161" mass="17871" checksum="5C02622A29B09AFE" modified="2025-10-08" version="1" fragment="single">IASDMLTGQIGSQEEFERRISSAGLNPLNNSAYYNELQTINALSKQQLEGGLQESDDINLRQLYAIRLGAIESKAGKNVVDFAYKSGMPLTPLDYGSGASLIKRAAETNAYSKRFDQPINSLFTDVERKEYQRIFSEGYPETQVQTLKAISQINIPEAQQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ADY4</accession>
    <name>A0ABV2ADY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000012</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="24385" checksum="76D2D073E3CA95F3" modified="2025-10-08" version="1">MTLTSDPKKTKTKAKFFDFKMSQTLFEKMVQMKLICLSRLAIKSKNSSTFQIAYLPGTNVNDPKVIAAFLDRLEKAKNNNLPVRISTAVPSPHKKAKFHLWEHQREIFKDLSLKVYGNLAKVLVEKLTLKNYLQIIGIKRRFPWIKDENLLEKFICDLPQNAQSFVKKGLDYKVSRIVENLLVLLAKMKLVRVKSDISEDRIMVSNNCGRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE37</accession>
    <name>A0ABV2AE37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18628" checksum="E78216A047C1EDB3" modified="2025-10-08" version="1">MTNLQNSLFNLSEAATCPCTVRPGTRLPDSTFAGLAPVSPYDEIGSILRSLKSRPPAPNPPRKRGCNFFPYCEKLCPPCKRRGRRKKKKYIWCEKMSSSSRCGKRRSSQRLSCDKYNCPSDYDQNFPSDVCYSDLCDSCKHSYKKSYGSNYKRRRRYTETSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP5</accession>
    <name>A0ABV2AEP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000182</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="25152" checksum="5C95735D7B620A16" modified="2025-10-08" version="1">MKTECLIQCLPNTYGTVTTECMEANTQFEIKGTCIEHKCNLDIGDLTNRSIDYTDCPATTNNLLYRSDCNLKCIQNYFGDLKVDCYGENFEITGNCSQKRCYLKTYAVSEDYVDIRNCPFNSLLLQDECLLKCTQYSSGEISVECLSNGDNFEIKNMCIPFRCNLTDEIAQNLKINNFLCKTLKFVEECDLKCLDGYSGQVFPKICPEDGGVFDIIGSCYIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF23</accession>
    <name>A0ABV2AF23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000277</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000037">
        <property type="protein sequence ID" value="MES1918290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="34600" checksum="5144907D973C8F16" modified="2025-10-08" version="1">MTGCPTQTMELSHSTNTVAKESSPKISNDENFQFFNITEHKTIKSEDLQDRIANEKIVEKTEEKTTHFGNIETYMSETQTTIEAELLFIQKLLKLEIEHSKQLLRILKATAEDKFVQPNSGAMLLIGKAGVSEQETRLKNLERLTKAAGTVKKSFASQQNDFFAAMAKIRELQTQIESRKEKINRQALKLTNKFFEASRREKIRRRREAIGLELEIDYLNDFEDRCFELKSEVAEKLPRMESVYKDFLNRLKRFVTESLNSHAKIVLKGDVINKRRCKRVEILKVSHSQLFGKDGVPIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF52</accession>
    <name>A0ABV2AF52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000262</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19724" checksum="2415348E2F1AA5D9" modified="2025-10-08" version="1">MCNRKPQYHNRKMESLLPDWLNPDKDKIIEFFISLLFFQLSYIAVFQNIVRIRNDKRWFYESLSLRTYIHILTFSSGILLGLVYLNFLTFRITQKAYVIAVLRCIAIIHIITLQFVGLKNFLDTIKIFNEPKARIGKIILIVSYSVYVLVFVLSVILLFVYRESKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ2</accession>
    <name>A0ABV2AFJ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">KH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000061">
        <property type="protein sequence ID" value="MES1918432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50084">
        <property type="entry name" value="KH_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="782"/>
            <end position="809"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="910" mass="105195" checksum="98515F97FD841A55" modified="2025-10-08" version="1">MLDLKRVPQFNKDADQFCEHCRPIYQKTILKFERRSSKDKQKIEKMKEMIKKLKKKIKNETYKSPSGYIDSENAILVEPKIEYSPSSDFIQLFVPSRNLKSVNLNNEIVEKYSISFSAIKRPQNIEEIVEETKNRWGLEKAVVKINNFVLFKTKGISSSVNSFRKEIVEYLDMRLRTIYRYLILPTNCVEKINLEKIRKESSEDELYRCAVKITPQNSKNAFSADLTKNGLSQIELIGFPNICDSVETKITAFVKMFLDEPDVILRLSKPAQNFFTQNCNKEKINVVTGCFVDKSENGGLSVFSGNDQSLRNSVGYIESLFTDFAKGKLTEKIIIKKQLLDIINEYFVDKLKKLNSNLNQIDFKFSPKELCLRSQNFEESDLDSFYRNADFIRKMTKPSKIVENINPKKMKLLRYLEKPIFEQNKSIIHLKRSETNLSIFIFSEKAEEASKTEMIIRKTIKKLPDETVFVEEYQQGAFGNSVISEIEKKFDIVVVNQIYRNRKELKAFDNFTKSPSKKIDENKSCALLIFSLNSIMSKTTNGVSETKNDVSEKSKLAADEIRKTAQNYDKTEPQLLLKLPKSRVKLLTAEEIRKTEEDFSVKIDQNVQDKSFQQKEQKSVQILGLYGSKPNCEKAEKIINKTCLTSLEPTVKVEITKEKAEKLTSNNQQQLEAICKETGCVIFVESENRGENPILQALIYGNVYACTEAERLIRRQKSARKADRILIVPESDLLHIQSEDGRMLKKLEERTDCEISIPSVLVRDPLDTEVRIGIFGDHLESLNEAEKGLRALTSLLSKVENKITRLKEIPKSAALVMEQNDSKLIFLLQDETRCLIRLEWKSQEDQEDGALLYLRGSQITCDAAEARINLICSLFLHFVVFKCPWILLFLYRVQNEFRQFFDFYFAENNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK8</accession>
    <name>A0ABV2AFK8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Histone acetyltransferase</fullName>
            <ecNumber evidence="8">2.3.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000067</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-lysyl-[protein] + acetyl-CoA = N(6)-acetyl-L-lysyl-[protein] + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:45948"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:10731"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:61930"/>
            <dbReference type="EC" id="2.3.1.48"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the MYST (SAS/MOZ) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.48" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000008">
        <property type="protein sequence ID" value="MES1918037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.60.60">
        <property type="entry name" value="N-acetyl transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002717">
        <property type="entry name" value="HAT_MYST-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050603">
        <property type="entry name" value="MYST_HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025995">
        <property type="entry name" value="Tudor-knot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040706">
        <property type="entry name" value="Zf-MYST"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10615">
        <property type="entry name" value="HISTONE ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10615:SF161">
        <property type="entry name" value="HISTONE ACETYLTRANSFERASE KAT7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01853">
        <property type="entry name" value="MOZ_SAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11717">
        <property type="entry name" value="Tudor-knot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17772">
        <property type="entry name" value="zf-MYST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51726">
        <property type="entry name" value="MYST_HAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYST-type HAT" evidence="10">
        <location>
            <begin position="105"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="69"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="32774" checksum="8FE1EDFFE784EF92" modified="2025-10-08" version="1">MSVETPEKKESRKLVYCLNRKGIRKRCYVIDKKTSRKSNTMYYVHYENTDKRMDEWVTSERLENIPQLAQSRQSAQKQPKQPKKSEVARNASESCLVQSHRHKHARIKNIDKVIFGEDVMEAWYFSPISPQFVGEVNGEKIVYFCDFCLRFFCCSKELTEHCKRCRVCHPPGNEIYRSEEEKTTINVFEVDGAVEIEYSQNICYLSKLFLDHKTLQYDTIPFLFYVLCEVTDIGCRFVGYFSKEKRSDLDYNLACIMTLPCYQKRGFGNFLISLCFML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG28</accession>
    <name>A0ABV2AG28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribosomal protein L5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RpL5</name>
        <name evidence="5" type="ORF">MHBO_000557</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL18 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000094">
        <property type="protein sequence ID" value="MES1918613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00432">
        <property type="entry name" value="Ribosomal_L18_L5e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01337_A">
        <property type="entry name" value="Ribosomal_uL18_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005485">
        <property type="entry name" value="Rbsml_uL18_euk_arch"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057268">
        <property type="entry name" value="Ribosomal_L18"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23410:SF12">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23410">
        <property type="entry name" value="RIBOSOMAL PROTEIN L5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17144">
        <property type="entry name" value="Ribosomal_L5e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00058">
        <property type="entry name" value="RIBOSOMALL5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53137">
        <property type="entry name" value="Translational machinery components"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="245"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="252"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="32654" checksum="2C6170473AA51FD6" modified="2025-10-08" version="1">MALPRENHKTSYMRRFVVKYKRRRQCKTNYRKRARLVAQYKNKYETNKYRLVVRKTNRDIICQITSSDLSGDKCLVSAYSHELKRYGVPCGLKNYPAAYCTGMLLAKRLYAKLKKEVESVAEVNGEFYLDDESGAFRAFLDTGLARCSTGANIFGVLKGAVDGGLNVPHNTRRFPGSTFEKNDDGVKQWEYEPEAHRDRIFGVHIAEYMRKLEGDDPEKYKKQFGLFIKVLNDIVEQNRGGRYRADVPEGARQNQSESLCSERQQRTGLFQSEQEQAQKIGGTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG64</accession>
    <name>A0ABV2AG64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MOB kinase activator 1B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">MOB1B</name>
        <name evidence="1" type="ORF">MHBO_000611</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000105">
        <property type="protein sequence ID" value="MES1918681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.30">
        <property type="entry name" value="MOB kinase activator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005301">
        <property type="entry name" value="MOB_kinase_act_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036703">
        <property type="entry name" value="MOB_kinase_act_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22599">
        <property type="entry name" value="MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03637">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01388">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101152">
        <property type="entry name" value="Mob1/phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="27506" checksum="9E10D47AE811879D" modified="2025-10-08" version="1">MVINWFSNFTKNKTLIQNKSKRNKNLARTLKMTIRKDNFSEEGNFRKAVHLPKGENINDWIAIQTVDLAESSLLLWSMTEQYCNKKSCPLMSAGDKTTYLWSDGKSKPIYLPAKDYIRNTFNWIDKQFENNKIFPISENEDYPKNFQKIVSTIIKKMYRMYAHIYFSHFSDMEINGLESNINSFFKHLVFFIAEFKLLKPADMAPLRSILERFLTDDEYFKLMKIKKRDFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD7</accession>
    <name>A0ABV2AGD7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Tim44-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000648</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Tim44 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000114">
        <property type="protein sequence ID" value="MES1918730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.450.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039544">
        <property type="entry name" value="Tim44-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007379">
        <property type="entry name" value="Tim44-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10721">
        <property type="entry name" value="MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10721:SF1">
        <property type="entry name" value="MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04280">
        <property type="entry name" value="Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="NTF2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="3" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Tim44-like" evidence="7">
        <location>
            <begin position="78"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22588" checksum="0CBB65F18ADC4BFD" modified="2025-10-08" version="1">MFSKARKTESYGKYKGYSEQFVKYAKNNPHFQKFIDLRDSASDKIEDLKESLETTQNPIVWKIRDVGDRMFAETDTSFALRNVNNIEPDFSPYEFLNELKLNILPVMVQAIIDCDMEFIEQTCVENAYNSMFGHSKARKHLDSVLKCQLMDILDVNFVNATLHNKKSILNFNCIGQHLETATKKDPEKSKIPTVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN8</accession>
    <name>A0ABV2AGN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000059">
        <property type="protein sequence ID" value="MES1918412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13366" checksum="E8A37B2834A3AB86" modified="2025-10-08" version="1" fragment="single">ENKCRYYRCNRHRFYLTVRESYVKISKNHKTCKERRFGYWAIKISESIKNVLAKHLELANGKNTCLRNEYVKNKNGFMSACLAKSFAKLFLRLYNLDNKENKTINEFSAKVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS2</accession>
    <name>A0ABV2AGS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000710</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000129">
        <property type="protein sequence ID" value="MES1918807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05325">
        <property type="entry name" value="carb_red_sniffer_like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051468">
        <property type="entry name" value="Fungal_SecMetab_SDRs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43544:SF7">
        <property type="entry name" value="NADB-LER2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43544">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE/REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="20204" checksum="AAC2CB428EC16222" modified="2025-10-08" version="1">MDVTSPESIDNAFKTIKKTENKIDVLINNAGQVALKDKNALSCDENSLKDCFQTNAIGPFLVTKTFLPLLVQSQNPKILNVTSYWGSMSDKNKKISSFLTSYRVSKAAANMLSKCLAIDLNKKKISVVSINPGWVNTEMGRFGGKFHPILSPEESAKGIIKLVDSVNLSMSGKFLNYDGSELSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW3</accession>
    <name>A0ABV2AGW3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000810</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PA-phosphatase related phosphoesterase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000155">
        <property type="protein sequence ID" value="MES1918919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.144.10">
        <property type="entry name" value="Phosphatidic acid phosphatase type 2/haloperoxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043216">
        <property type="entry name" value="PAP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="PAP2/HPO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="PAP2/HPO_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10165">
        <property type="entry name" value="LIPID PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10165:SF35">
        <property type="entry name" value="RE23632P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="Acid phosphatase/Vanadium-dependent haloperoxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="192"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphatidic acid phosphatase type 2/haloperoxidase" evidence="7">
        <location>
            <begin position="100"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25226" checksum="B5AC174C063A5305" modified="2025-10-08" version="1">MRMDLSKLLEKSVFKKIALSLLVSLILFGITVCVNLNIPPRVVTVKEDIPFLSHPVIRTHIGKKFLALTCFLLPIAIFAVVEYILDEAFSLMQILLFASTILLSINITYVVTATLKIAVGRLRPNFYELCSYDKLLEKCTASKKLEHLARKSFPSGHSAIAFSSQGVVFCYLKDKLMSKRFEDNLKIKFCKIVSICFPLVIAGIIAASRMFEQWHFLTDVIFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH36</accession>
    <name>A0ABV2AH36_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Syntaxin binding protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sec1</name>
        <name evidence="2" type="ORF">MHBO_000869</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the STXBP/unc-18/SEC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000172">
        <property type="protein sequence ID" value="MES1918986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.830.10">
        <property type="entry name" value="Syntaxin Binding Protein 1, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043127">
        <property type="entry name" value="Sec-1-like_dom3a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001619">
        <property type="entry name" value="Sec1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027482">
        <property type="entry name" value="Sec1-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036045">
        <property type="entry name" value="Sec1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11679">
        <property type="entry name" value="VESICLE PROTEIN SORTING-ASSOCIATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00995">
        <property type="entry name" value="Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56815">
        <property type="entry name" value="Sec1/munc18-like (SM) proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="34219" checksum="5A54B89D7A84CECD" modified="2025-10-08" version="1">MVKQMLIDDPIWNEFSDVHIATVIREIPEKSKEFVSNNPLLKIKQTSHKQLKDLSKALNQAPQYKKLSESFSKNISIAKACMDKYKEHNLGALSEFEQDMATNLKEGGKVFTKKKALEKIANFMKDDSIATAKKLRLIMILQTSYANVPKSDIESLMESAKLNNKQKKACRNISFLGTTEEIPNETLERNKLIQKESKLNLSRYEPKIKNVLKEICEDTLSKKNFPYVQEPPPEKSMKRGRRKKNKEMCKIIVFVAGGLSYSEIRCCSEVSKTYSRDVIAGSTDVVSPKEFMRELIQIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH69</accession>
    <name>A0ABV2AH69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000902</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000181">
        <property type="protein sequence ID" value="MES1919024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="225" mass="26092" checksum="5CC85431338C4D56" modified="2025-10-08" version="1">MVGSISKNSSLLFYLKYKIPTQQKSENFEVELELYDFSKKKYRRTVFLFVRTKSLFSSMHKKDVGVDYQKSIILEPDYKRRNANLCRNKKDVFSKTFIFGLLQKSTIFVRLEGSKSVSAKIQPAFEDWNSYCCQKKDGKVELKNEEMEGGTLYLLTVSAEKRIAKLKIWSDIKIGMLNPDQIFSTYPKMGNLGKMGNILPQKMSCSRGQRKFVDFSITIIILNFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH73</accession>
    <name>A0ABV2AH73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sphingolipid delta(4)-desaturase DES1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DEGS1</name>
        <name evidence="3" type="ORF">MHBO_000899</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000181">
        <property type="protein sequence ID" value="MES1919021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005804">
        <property type="entry name" value="FA_desaturase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12879">
        <property type="entry name" value="SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12879:SF8">
        <property type="entry name" value="SPHINGOLIPID DELTA(4)-DESATURASE DES1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00487">
        <property type="entry name" value="FA_desaturase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid desaturase" evidence="2">
        <location>
            <begin position="11"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20960" checksum="BD569FFDEE9C6A8D" modified="2025-10-08" version="1">MAEIRLFRTPLFKVFWVFLLPLFYALRPCIQRPKRPNFWEIFNIAVVFAFNYFLVHFFGFKSLIFLVYSTLMGMGLHPVAGNLIAEHYEFVLNTETYSYYGILNFVNFNVGYHNEHHDFPCIPWTRLPKVNSIAREFYKDLPCYSSYLKVFYYYIMSSEMGPFSRITRDQSVLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH85</accession>
    <name>A0ABV2AH85_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding domain</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SLFNL1</name>
        <name evidence="3" type="ORF">MHBO_000915</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000185">
        <property type="protein sequence ID" value="MES1919041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.30">
        <property type="entry name" value="Schlafen, AAA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029684">
        <property type="entry name" value="Schlafen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007421">
        <property type="entry name" value="Schlafen_AlbA_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038461">
        <property type="entry name" value="Schlafen_AlbA_2_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12155">
        <property type="entry name" value="SCHLAFEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12155:SF41">
        <property type="entry name" value="SCHLAFEN ALBA-2 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04326">
        <property type="entry name" value="SLFN_AlbA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Schlafen AlbA-2" evidence="2">
        <location>
            <begin position="43"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="177"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="191"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23111" checksum="2449F9EBBE3FBA67" modified="2025-10-08" version="1">MTMFNAVQMEPLNRSLKIPRTRGNVADLSKNFFYRHDIYPSDESRFIEFKALTKATHLAQRIMDIAEKYMVAFLNADGGKTFCGILDTGYILGLKMPRKLRDEIRLGIDSLVAQIRPAVPNDLYSVTFIPVFSRFEQIEDFYVMCLECKKGNDIYVDSKHVYFFTLERLDSQRRKCEDDECSDGTSTLAEEVGRKSTEGEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC3</accession>
    <name>A0ABV2AHC3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sesquiterpene synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000189">
        <property type="protein sequence ID" value="MES1919063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="191" mass="22664" checksum="79F041B48EE9F667" modified="2025-10-08" version="1">MSASNREKVLNDDFERILENGKPIFMFFAYCKSKCTPVFTTLSYLKHRCLDSEQKQRVSRYLYDAVSRTFLPSDNSNEPLTARFLDEMYFRLMENYSKIFEPFSDDVELGSYENALSRGINLICFLEEIKWKNNVDCDKIMQKVAEVWLRDRIVELGQTAFWTRYTRKCSDFDIHPVLDALKKDYVLLYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT5</accession>
    <name>A0ABV2AHT5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000160">
        <property type="protein sequence ID" value="MES1918938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="86"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="19070" checksum="3F33EAC84623B4CB" modified="2025-10-08" version="1">MKAQKESQDLQEIQTQKTIKKPSIPPPTTIKQEHSPDKTETTKDKPEILKPEVFAQENSRTINKPIPNSKMSSVDKITENIVTSSETKENLPETQKEVSKDDSVEKESINNEKTSEDKKNFDAELNQKSLFFKGKYECDVCKEENYKRYLNTEKGLRIHKLVMHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI01</accession>
    <name>A0ABV2AI01_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001144</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000247">
        <property type="protein sequence ID" value="MES1919288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="37"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="365" mass="42157" checksum="98659BB2F6576A2D" modified="2025-10-08" version="1" fragment="single">MQMSKMGDLLKTVVGNFLDHKVKDLERLIDKENTEKIDQIRIEIENYADSLKQRKSEFDIFLVPLQNKIKTVEAKQSSLDSLESNRYGKVEKIHRLRLNLRELQKEREMLQEKAETKLEKLRTEFNRENGDILAALQKFLEHKHKVNTEILGDFFDDLKKKLGLLGDLLQSRTKKVKSEFTAARDVSELSMKMSGEAGSMGFYFHENLMESDILESTRTILQKSRDLGEKLISFTSQFGSAHKCFKKDVSYCFAAQSVLSKNLGNLISAINDFYEYRSFVIETETKKFEYFIEKLGDYAESLQNYTAKNGEALEKIDPKDIKTKKSSTGLGAGFDENFFAALEESKSTFNADVENFKVFFQIQFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI20</accession>
    <name>A0ABV2AI20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001173</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000255">
        <property type="protein sequence ID" value="MES1919321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046828868" evidence="1">
        <location>
            <begin position="30"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11683" checksum="FD1988601932134B" modified="2025-10-08" version="1">MTSKTKINFPSKLSSIIICNLLLVSITESQCRFSDCIYPNTHLPGYACGENIRSTYSQAQTDCCGCDECRGVTQHNNRGQLEYSARSGRLTQSYCNDTSSLRILT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI31</accession>
    <name>A0ABV2AI31_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000961</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000197">
        <property type="protein sequence ID" value="MES1919094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="7667" checksum="106DAB207E992EB4" modified="2025-10-08" version="1">MKLLKARGVEIKSLPSELSSCDSDSKKKKTVAESEQPVKQPEERKCLFKRIISKILRVPKNIISLAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI59</accession>
    <name>A0ABV2AI59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000989</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000204">
        <property type="protein sequence ID" value="MES1919124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="99"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13380" checksum="B5FB33B830410058" modified="2025-10-08" version="1">MLIRSINKNLCRNKTRNPFTKLRTREFSTLANSTVFRIYKRYIASSSVVFAGTILSLTVLYMTGARGFSNWVWNQYNKDKSFEGIIGRFPEKIPYEPFGAEEEEEEDEFEDDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC5</accession>
    <name>A0ABV2AIC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001264</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000285">
        <property type="protein sequence ID" value="MES1919426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15869" checksum="E21A6CEA64A43903" modified="2025-10-08" version="1">MGLDEMDMMEKARHLRRQRKLLRMISDFDGLAEEESLALLVSVGATGILDSVAEEHVLDFGNEFLAELRFLYKASKEKSRSGENEELDSRGKTNACLRVAGNRSVGRLCFEGEAVSERVGFSKIKILFEEKQILIVLSSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AID7</accession>
    <name>A0ABV2AID7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000179">
        <property type="protein sequence ID" value="MES1919012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15859" checksum="A8DE278594B887AB" modified="2025-10-08" version="1">MIENNKFQFLTSLRYHITNVNESDFVYDYGVPVFLLAAQLGKWRNKQNEIKDLLKSLIFESHLYNSNMFLIKMSFELFLDEQEFADIFSQLDSLREIIESDEYREMVQCAIDFLKKHIYGRVTVLRNVLLIFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ3</accession>
    <name>A0ABV2AIJ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001318</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000308">
        <property type="protein sequence ID" value="MES1919496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="319"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="354" mass="41095" checksum="410FE643951867CD" modified="2025-10-08" version="1">MTVYEYPYFYGKSCTKNLALGQYDIFMFNNHDDCDMIFYTQIRSFKVRGDRCKAKVFGLDGHNEDFFGNVDIPELSLTNLTNQIFYAFLFELSADVILTTYFDYVNRRSFAYDYSYLHVCSSTEVDNGLNIAKLDSNSPDFGWVYEGEWTMYSHEKVTPMPDKKSWCCLDEFPKLTEELVYSNEAFSKCAEKTRIAPTELRGVQMEFIYRRRLCTVNDLTSHFHYKNTTFAMGFAASTENDVVLIGKIGANLDVVTNLNGNTLYRVWCCDEDCYPVFYQCIEDKDCCTFNCVNNICAFPETTGGDDDGENGSGERKMGLLSRIIIFLVGLYFFGWILRFCCPKRKRFDRRIKIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN0</accession>
    <name>A0ABV2AIN0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_001307</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000304">
        <property type="protein sequence ID" value="MES1919482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052239">
        <property type="entry name" value="Ser/Thr-specific_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45998">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45998:SF2">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="55"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="337" mass="38803" checksum="DBCBEB4CD65FE8EA" modified="2025-10-08" version="1">MIAGIAKHLLKQLLNFFISFLYSTSLLVFNTIRYFQSYLFGNKKTINFKKSNLKITILEQIGEGGYSFVYAAKDQTGRRFAVKKALVQSKEQKTQTDKEITTMKEFDSPYLLKLIDEKKEPHDSYLNFYNHFLLLPFIEQGSLQDILNKRIYSGNLFEEKTIFTIFGKICEGIRTLHDSEPPLAHRDIKLGNVLVDSVYNPFIMDFGSVSEARRQIRSREDAVELSDWASMHCTNAYRPPELLDCPSEIDVDERTDIWSLGCLLYGMAFGQSPFEDSGGTTSVTLAVFSGKIAFPEDNKYSKDFVKMVKWMVNLNAEERPFIKDVIERIKNLLNNHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF2</accession>
    <name>A0ABV2AJF2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">60S acidic ribosomal protein P2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001560</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein P1/P2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000403">
        <property type="protein sequence ID" value="MES1919796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05831">
        <property type="entry name" value="Ribosomal_P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038716">
        <property type="entry name" value="P1/P2_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00428">
        <property type="entry name" value="Ribosomal_60s"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="79"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="97"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="123" mass="13120" checksum="1DD07DB979B7590D" modified="2025-10-08" version="1">MTNAFENIDSLKDNDKKLFSCLLSALILADDNMEATEDKISSILKASGSDADAIFANIVAESLKGKDVKELAMQGGVFGGSAPAAATESAEEKKNEEEEEKEEEAGENVEGFGDLFGSEEYSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJL8</accession>
    <name>A0ABV2AJL8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="5">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">MHBO_001633</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 21">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the HRD1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="19">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000431">
        <property type="protein sequence ID" value="MES1919881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16479">
        <property type="entry name" value="RING-H2_synoviolin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050731">
        <property type="entry name" value="HRD1_E3_ubiq-ligases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057992">
        <property type="entry name" value="TPR_SYVN1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058051">
        <property type="entry name" value="Znf_RING_synoviolin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22763">
        <property type="entry name" value="RING ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25563">
        <property type="entry name" value="TPR_SYVN1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="14 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="12" id="KW-0862">Zinc</keyword>
    <keyword evidence="9 15" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="213"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="18">
        <location>
            <begin position="294"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="354"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="16">
        <location>
            <begin position="359"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="19">
        <location>
            <position position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="MES1919881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="380" mass="43915" checksum="7ABB344FCCF4858A" modified="2025-10-08" version="1" fragment="single">MKLKLKTYCIVSTIMTLCLITFSVFSHETLYESLSEMAQSEAAALVFANFSFMVILLFGIFIKNAFFGALSNEEIDTVVENSKWSLLNLFMVITMFTDDLNAEVLTFIVLYIFFKIFHWIVGNRVDAIHQMRIQNLFDRSKLAFFISSLLVADTFCVLHFTAFLQSRVYDSGIGSVAIFEFANMALSALYFGSKYSLNIFDIKHNGRWNKKPFLTFLLKMTFLLLSASIYIFFVYYITWNYGLPIYLFRDIYTIFFKLKSTYQKYKTYNILVNALHANFPDVKGAGFENLDRVCIICREDMLVGKKLPCRHIFHLECLRSWFERQNTCPTCRSSIPIYSRSAATNPVGRHRFSNNITDDGFDNSDGDGDNNIDNNDIDNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN5</accession>
    <name>A0ABV2AJN5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">TIP41-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001644</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TIP41 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000436">
        <property type="protein sequence ID" value="MES1919893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051330">
        <property type="entry name" value="Phosphatase_reg/MetRdx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007303">
        <property type="entry name" value="TIP41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21021">
        <property type="entry name" value="GAF/PUTATIVE CYTOSKELETAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21021:SF16">
        <property type="entry name" value="TIP41-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04176">
        <property type="entry name" value="TIP41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="254" mass="29778" checksum="ADD457110FED099D" modified="2025-10-08" version="1">MATANSFIHKNWEFKDNKAPISSETTKDQILDKENIASLPEMFFGDNYVQLTHDSNFIIRFDPLDSIVCLKHVPKKEFAKVKYSKNFAASKFDVLDKNFDWTFSSPYKGTFKSMSNNKFVDCASLFVETADIIDIKLLEKRDKILWFSSVILFEDELHDNGISVMLTKTRVMDDFFLSLIKLFVRVDDVLFRVKETRIFHAFNTDYILREFIEKSETFEQLSSRGVSRLKAIRINPEDDEDFRIESRSIQKIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR0</accession>
    <name>A0ABV2AJR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001624</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000429">
        <property type="protein sequence ID" value="MES1919872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19128" checksum="7D19F465C60FCFDF" modified="2025-10-08" version="1">MLHMQIFSVLNKKVCDYLQNDYMPFSEVTTTTEKSCLYKSKEYDYAYRYNDPILDVCLYELPANTEFLAPLPIKHNDFVISTGPVLVKCLEGAHVEGSKSTSYMMECVRNVATKKNCIFEEANTQPKDLLEEFLGKYRVSVQIVFLLPFSALIMAISSVMICLQFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ2</accession>
    <name>A0ABV2AJZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001731</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000472">
        <property type="protein sequence ID" value="MES1919998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037485">
        <property type="entry name" value="PEX22"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22978">
        <property type="entry name" value="HAD_Pex22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22141" checksum="18CDC0C97935F8C9" modified="2025-10-08" version="1">MDSHSSKYVVVVFITIIIGFGLIFFVNFLFPNGSERTGNANFVTKKDFKISLFYINRHFDIDEMISFLSLLKPLQKISQIALLFKISKDDSFEKFEKTYFDKEDSIMKKFGIKKHFVLFCSTDIGANAIIRQINPIYFITDRKKAAIESNCFLKESKIVFIENSKNLETENKISQAISTLKFGSFSEFLATI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK12</accession>
    <name>A0ABV2AK12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001746</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000479">
        <property type="protein sequence ID" value="MES1920016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9481" checksum="399B091FEB7B11B0" modified="2025-10-08" version="1">METLANFRLEIMSDEEKSKDTMTGFEPSIITESQKNSLSYYFDRFNLNSRASKDVSNKTVIRKGPSSIVKNKIGFKQNLFMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK21</accession>
    <name>A0ABV2AK21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000479">
        <property type="protein sequence ID" value="MES1920015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9484" checksum="FFED4ABD70A15F80" modified="2025-10-08" version="1" fragment="single">MVLNPNSLKESKAESEKINLKENCFLKEITKNKLSSDNEGQKEKIPPPKPLSSKERNEKRKRQIWIGKTSQVYKKFNREVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK23</accession>
    <name>A0ABV2AK23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000480">
        <property type="protein sequence ID" value="MES1920020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="22292" checksum="89F4CEB1047840BA" modified="2025-10-08" version="1">MNKILTNKKIYFVDKIDFEDTVFFDQNGTAIFNLIQCEFNPSEDNKTSLRKNCFFFLRSVLSLYTFTQSKPQNLFKLLSAIKNSLLNGEDFLYKHYSKFDFGFSILPLCVDDQFYFYRAFCDQPFKTSHFDGKARIIKNSSYKMRVAIFEKNSFVCDRFMKESGAHVEYQYRDWKYVYVVYEDEHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK35</accession>
    <name>A0ABV2AK35_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="3">PPIase</shortName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001758</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000483">
        <property type="protein sequence ID" value="MES1920029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01926">
        <property type="entry name" value="cyclophilin_ABH_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024936">
        <property type="entry name" value="Cyclophilin-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020892">
        <property type="entry name" value="Cyclophilin-type_PPIase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071:SF561">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001467">
        <property type="entry name" value="Peptidylpro_ismrse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00170">
        <property type="entry name" value="CSA_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0697">Rotamase</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5044961050" description="Peptidyl-prolyl cis-trans isomerase" evidence="3">
        <location>
            <begin position="18"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="4">
        <location>
            <begin position="27"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="21590" checksum="E9FE94F1E0FE9060" modified="2025-10-08" version="1">MITVLLYCLAALNIVGARTPAITNTVFFDIEADGKPLGRITMGLYGQNTPKTTENFRSLCTGEKGVGRSGNKLHYEGSTFHRVIPDFMIQGGDFTNGDGTGGESIYGDKFEDENFDLKHSKKFLLSMANAGKNTNGSQFFITTVVTSWLDGRHVVFGEVLKGKEVVTAVENLGTPSGKTTKKIVIAKSGEIRESEKVDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT3</accession>
    <name>A0ABV2AKT3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LamG-like jellyroll fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000592">
        <property type="protein sequence ID" value="MES1920295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13385">
        <property type="entry name" value="Laminin_G_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="294"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="344"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="344"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="360"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="389"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="635"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="635" mass="73478" checksum="2CCF3378726EEB87" modified="2025-10-08" version="1" fragment="single">MVVVKAEPSLLDKLEEISEMTMNGMDRIGQTLLVSRNIVEVTENYYQIAEKLIFPMAGKEYYVREDPFANTGYKVDTFCIMFWIYLTEEERKSHQIIFVKGFGQTNSSVFPLIALTKKNRIFAEIYLRGSSTTLHSNKSLPAKKWTHFAINCNAEKMEMAIDGEAVGQKTILGVCEPSNDLIFVGNIPPFVANNADAIVLKEQIGLADMRCYTNPIKIEEIKKIVEETKPINAEDIKIETTTKFSKKNQNEKSKTEKWTKESDEQLIKFYANELQKRKRSSRNNSEMPEIQWRYHSSRNESNLQPEQRPDQPRLERNIELLAQRRTDHSTERRFYVVPRSSLIETNSNDDSNFNVVRSSNNGDNNNETNIDNNNNETNIDNDNGGENNETNRNREEQRSHSETDIVRPMYRFSSNRANVFGNVGLNILYQSNRSERREQMADFDILIDEEMEDDDEEYLSEYEDSEDSNGQIQIYPLNTEQAIFFDVGRVSFEGLERKYPLLAKMDCKTILERLVQIRILNNRLNQIFHLVDFSQVSEKGSLAERLIESRNFIFSLTKNRIFTRLLDATKSFSRVKVQVNRLQALKAKERGENDGKKSVFGQIYRQANFLSPSALRSYRHPLMVEYVGEGGQDAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT9</accession>
    <name>A0ABV2AKT9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Prokaryotic-type class I peptide chain release factors domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001962</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000580">
        <property type="protein sequence ID" value="MES1920275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1660">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005139">
        <property type="entry name" value="PCRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050057">
        <property type="entry name" value="Prokaryotic/Mito_RF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43804">
        <property type="entry name" value="LD18447P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43804:SF7">
        <property type="entry name" value="LD18447P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03462">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00937">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="Release factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0488">Methylation</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prokaryotic-type class I peptide chain release factors" evidence="5">
        <location>
            <begin position="235"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="57"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="377" mass="43634" checksum="767A0FE1C62780E4" modified="2025-10-08" version="1">MSFSKMQLTNKIGLCTSLLSKKIAQRLTNITKMAELDNNKNSENLNRTSFSPIFKVLSKYKKLENEKNELIEILEKEKKDDIIKMFKDEILDLETKIDRLFNQFLEDLESSNHRNNDKDAILEVTAGVGGTEAALFSREIFDMYLNIANIKDWEVKILVENGRKRLKRGLAIFKGENAFKSLENECGCHRVQRVPFTERKGKIQTSIAKVTVFPNNNEETNVNINQSDVIIDYYRSSGPGGQNVNKLETAVRLTHIPTGIVVTCEEERTQHVNKKKAFEKLKNKILMKKILEGRKELSEKYNSLKISGERSDKIRTYSWTRRHVVDHRTKLKILNLDSVLKGDALTRFWEALEIQKKEELVANLTYSNLVDKKIKFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKU3</accession>
    <name>A0ABV2AKU3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001647</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000437">
        <property type="protein sequence ID" value="MES1919897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10747">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.230.10">
        <property type="entry name" value="Heat shock protein DnaJ, cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001305">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096">
        <property type="entry name" value="DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096:SF52">
        <property type="entry name" value="DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00684">
        <property type="entry name" value="DnaJ_CXXCXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="DnaJ/Hsp40 cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51188">
        <property type="entry name" value="ZF_CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CR-type" evidence="3">
        <location>
            <begin position="42"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="2">
        <location>
            <begin position="42"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="303" mass="33372" checksum="BDEA12AAA31E51B5" modified="2025-10-08" version="1">MSDIFGDIFGGAANRNRNFNPPRRGRDIQIRIHVSFMEAVNGCKKRISFSRENSCGVCNGTGEKTDSGNTVCSDCHGRGTKSTVRGPMMMQTLCNSCGGTGRRIQNCGTCFGTGKMNEFKNLNVVVPKGVDNGTKVKISKEGNSGSFGGSRGDIQLLIDVEPHPEFERQGSDVHLNIDLDFADAILGTKKRIPTLNGEVILTVKPGTQPGEVNRMAGKGIKVLNRPSYGDQFVHFNVSLPKKLNAEQKKLMNEFQKSRGKFETGEKDNLKNENIEKANISNNKILKRKKKRSGNFFSRILGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL13</accession>
    <name>A0ABV2AL13_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cleavage polyadenylation factor subunit clp1</fullName>
            <ecNumber evidence="3">2.7.1.78</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CLP1</name>
        <name evidence="3" type="ORF">MHBO_002010</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.78" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000612">
        <property type="protein sequence ID" value="MES1920330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051734">
        <property type="term" value="F:ATP-dependent polynucleotide 5'-hydroxyl-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.1030">
        <property type="entry name" value="Clp1, DNA binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032324">
        <property type="entry name" value="Clp1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038239">
        <property type="entry name" value="Clp1_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16573">
        <property type="entry name" value="CLP1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="Clp1 N-terminal" evidence="2">
        <location>
            <begin position="11"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11808" checksum="6CA26F0D44F053D2" modified="2025-10-08" version="1">MAENLQKSFVLDRFYELRIHPKKDISFKLKLNNGTAEINGAEMIISKQYLFNTNFYDSLAVFSWSGCTITISFQDLAIVIFSLLFEILILNIISFSKNLLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL38</accession>
    <name>A0ABV2AL38_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001824</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000515">
        <property type="protein sequence ID" value="MES1920108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047497657" evidence="1">
        <location>
            <begin position="23"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="298" mass="34425" checksum="13F5A6D9EB5C5592" modified="2025-10-08" version="1">MAEITKLMVLLVLANWANVVQCKRYDLFEDDFSDQKLFHEKWKTKDKTDFRYGGRRKEFKIKPGKHGRDAFIETEIKLHHHKKPPHIRIKAKIVRKGHCDNHYIVLRSESLVRNVPGQHPGVSLYSAGVGDVGGTWAHTGQIAFMGWKCDEKVLYVPGHKEHTSCSLHRECGIDITLNSTSIIFKDQCGCKTLRHEKYLFPRKKKLHLILGAHTFVGAAHGAAFKNIRVYSVDEAHEDDEELEEIDLEHHLFYHENKTVGKTGRVDEDDHETYHNLIRRRRVAAQLNAQIEDDGMSNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL73</accession>
    <name>A0ABV2AL73_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">40S ribosomal protein S21</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002098</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS21 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000667">
        <property type="protein sequence ID" value="MES1920430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1230.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001931">
        <property type="entry name" value="Ribosomal_eS21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038579">
        <property type="entry name" value="Ribosomal_eS21_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10442">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01249">
        <property type="entry name" value="Ribosomal_S21e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002148">
        <property type="entry name" value="Ribosomal_S21e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR002148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9371" checksum="716C287555385E81" modified="2025-10-08" version="1">MENNEGTIVDKYVPRKCYLTNRIITSKDHASVQLEFALLDEDGIYRGQSNTLVLSGYARKNAASDGAINKFLQENDMIEPLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL75</accession>
    <name>A0ABV2AL75_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000674">
        <property type="protein sequence ID" value="MES1920441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167">
        <property type="entry name" value="OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167:SF24">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE CHK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="38"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="332" mass="37897" checksum="7CC47B4CB65F7B6C" modified="2025-10-08" version="1">MSVRKTLDLELSSSDSSKSTCCFEVEGHVDCKETLSNYLISRTIRENGKNKIFEVEDKSNNQFVAKMSKAEIPNAKIFADNEVRILEILHGHDKIVSCKHVFKTFTQTIIIEERLSHSLADQIEKDTNMNKKTNLIFISVLAKELAEVLRHMHTKQVLHADLTSENVMFDKNGNLKLSDFDLSIAKENKLSIEVKGSPLFMAPEQTEGICTEKTDWFGLGMVLYDYLCGSTPNAEFIVLDDNKGYPNEEKTMKAIRENRQDFILNAKAENQEVADLANRCLKFNAKDRIDLDSDEVFSSVPLFQNITSEKVEEFKKFVTGFKDETKVFIHLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF6</accession>
    <name>A0ABV2ALF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribonuclease P protein subunit p21</fullName>
            <ecNumber evidence="5">3.1.26.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPP21</name>
        <name evidence="5" type="ORF">MHBO_001852</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the eukaryotic/archaeal RNase P protein component 4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.5" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000528">
        <property type="protein sequence ID" value="MES1920137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.50.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007175">
        <property type="entry name" value="Rpr2/Snm1/Rpp21"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14742:SF0">
        <property type="entry name" value="RIBONUCLEASE P PROTEIN SUBUNIT P21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14742">
        <property type="entry name" value="RIBONUCLEASE P SUBUNIT P21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04032">
        <property type="entry name" value="Rpr2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00038402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12367" checksum="EC292E427D40895C" modified="2025-10-08" version="1">MARKNRHENTQERVDFLSKTALALIKDKQFELAKYYIHQAKKICQKSAYKVKMPIDRKRFCKFCDVIFVPGLTSISKVKKDKSPKTFIRKCLLCKHERIFKITQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ7</accession>
    <name>A0ABV2ALJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002006</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000610">
        <property type="protein sequence ID" value="MES1920324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12999" checksum="9B54F63842139648" modified="2025-10-08" version="1">MSLFSVDRLYSTQTKISEDFIQPSNRKDSDERISKNVEPVCFEGITEKPFISFRLPLSVYSLFVIVYFLNQSWESLNFLRNGNECITKLKSYSFLYLTFFSKQDSYGTSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM35</accession>
    <name>A0ABV2AM35_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphatidylserine decarboxylase</fullName>
            <ecNumber evidence="3">4.1.1.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PSD2_2</name>
        <name evidence="3" type="ORF">MHBO_002382</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.65" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000837">
        <property type="protein sequence ID" value="MES1920741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004609">
        <property type="term" value="F:phosphatidylserine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003817">
        <property type="entry name" value="PS_Dcarbxylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10067">
        <property type="entry name" value="PHOSPHATIDYLSERINE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10067:SF17">
        <property type="entry name" value="PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02666">
        <property type="entry name" value="PS_Dcarbxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="265" mass="29381" checksum="B7EE41411806BA5B" modified="2025-10-08" version="1">MPRLTHRQGWHFDSKQSRFEIIPFMAMHKIGLDSLSKPISSFKNFNDFFSRSLSAETRPLHSEGKETVAVAPADCRMTMYKSIRDCDKILVKGTGINLQNLLCNVDMAADFSDGSVAVCRLAPCDTHSWNAPVKGVQGRIFSIEGEMNAVHPVARNHDALHRNKRVVTEIVSNDFGKVGFVAVGGPLVNSVQVEAKPLQEIARGQRHGCFKFGGSTVVLLFAKQRIGFDSDLLKNSLEPIETFVKANDRIGIAMQPQRESAKKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM73</accession>
    <name>A0ABV2AM73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002414</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000859">
        <property type="protein sequence ID" value="MES1920777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="292" mass="33655" checksum="F4E68E8379BA9DDE" modified="2025-10-08" version="1">MTEINLKSKNALKNTKRCQNVIGTAKKAKIVDILKSKNIFHNEDKKLLNAKFKFAEKCHCFPMSPQNPLIRILFKCGFRENFSTEPQKKTENFLSTPKNFLSAPKNFLSAPKNLSTEKQTNFDDISDPNNFSDDMKQRIIGLFEEKSTLSRTEIVDRYATKHKKPLFFDDLNRFLRRMENIEGVVASHNKRYFTLLDRFNVLVADERIGPDGRGSIGTFVEKSFPLILRFCANWRKRKFDQSGNSQKGVLSENHRTQIPFLSQSPRIQRIASVCDSEKLHLEQSGTHSGSIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH0</accession>
    <name>A0ABV2AMH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002466</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000900">
        <property type="protein sequence ID" value="MES1920840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037185">
        <property type="entry name" value="EmrE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007271">
        <property type="entry name" value="Nuc_sug_transpt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00803">
        <property type="entry name" value="nst"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10231">
        <property type="entry name" value="NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04142">
        <property type="entry name" value="Nuc_sug_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005799">
        <property type="entry name" value="UDP-gal_transpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103481">
        <property type="entry name" value="Multidrug resistance efflux transporter EmrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="115"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="171"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="270"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="297"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="321"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="341" mass="38620" checksum="790A8114E1E1756E" modified="2025-10-08" version="1">MANGSKQYYIAIKKLFLKSRQKQQNIENNEENELILKEKNEISLRFKLTLLFLLFAFNTITVLVVRESFKTNYNVNSAVLITELSKFVISFVILNRKQSFKETIFSFTQNPREKLKIMLIAFIYAVQNILVYISVKNLESAIFQVLNQMKILSAAVFSVLILKSFLGRKRWLAIFILVFGISIVQIDYSLSKSGVSSQNGREKNFAIGLWTGLAASTTSGFAGVFFEKTLKSSNILLWERNVDMSLFAVIFLLAFHVFSSGENMLRNFNLFTVLSIACNVMNGLVVSLVIKYADNILKAFAVSISIVVCAIIDYYRDLFTPSLFFVTGVVAVLFAVQLYSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMN6</accession>
    <name>A0ABV2AMN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">NEDD8-conjugating enzyme Ubc12</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UBE2M</name>
        <name evidence="6" type="ORF">MHBO_002543</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000967">
        <property type="protein sequence ID" value="MES1920936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23794">
        <property type="entry name" value="UBCc_UBE2F_UBE2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24068">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="2 4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="5">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="3">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13293" checksum="08B4EB282FE7511D" modified="2025-10-08" version="1">MADIFMSQTRLIKDISDLEFLENVQIKDIEKLSFDILIKPKNGFWKSRNIIFNFKASNEYPFKPPKLNCKSKIFHPNINEKGNVCLNLIRLDWQPVFTVQHVIFGLIQLLEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMQ5</accession>
    <name>A0ABV2AMQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000801">
        <property type="protein sequence ID" value="MES1920678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="25100" checksum="CBAB6DD09C6ABDE0" modified="2025-10-08" version="1">MFSKTFKQTKNPIKFLCVKKNSKTFCTKEPIEYKYNKTIYELKKQPFVNIYAVMFLAAIGIFDFKKMAIRQIWKSRTSDEFEKNLKNQNKALTTTFCVLFIISFRTVIAQFMRRGMNIKRVNLIMPSFEKSKNNVKNSFLQVHYGNNNNLKIPLHKLRIKQIDPFWKIWEYEENSKTYKLSLYTNQNKHRNNEIEDIVKVIKLHKAKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMZ6</accession>
    <name>A0ABV2AMZ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UDENN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002336</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000808">
        <property type="protein sequence ID" value="MES1920692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037516">
        <property type="entry name" value="Tripartite_DENN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005113">
        <property type="entry name" value="uDENN_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03456">
        <property type="entry name" value="uDENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00800">
        <property type="entry name" value="uDENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50211">
        <property type="entry name" value="DENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDENN" evidence="1">
        <location>
            <begin position="125"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23852" checksum="8DA0316B95545D18" modified="2025-10-08" version="1" fragment="single">MSQNRINCVDCDSIHINWVSTIFDIPLCDDCAKVHKQFFSNHSLIKSANPQDIFAINGNSFYKTLVKSERKHKNFDHQNLKTERYNFIYDKYISKQFAISKTKMRKQNEIKSEIRFCDYFVVLKRGKIVKNDSTSLSKIEYSPIVTDRYPLTDYEDYKLSPSIGMFVFPDNIYLLTNPSYTKYSFFTLTNENGVRQFGACLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN11</accession>
    <name>A0ABV2AN11_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Translation initiation factor eIF2B subunit beta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">eIF2B GDP-GTP exchange factor subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">EIF2B2</name>
        <name evidence="10" type="ORF">MHBO_002350</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the eIF-2B alpha/beta/delta subunits family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000816">
        <property type="protein sequence ID" value="MES1920707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="entry name" value="Translation initiation factor eif-2b, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051855">
        <property type="entry name" value="eIF2B_beta_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45859">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45859:SF1">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 10" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00044122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00044228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00046432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16392" checksum="2000ACDC3A8C497B" modified="2025-10-08" version="1">MACELGRVGIETTLIPDSSIFAMMARTNKVIIQTETAFASGTILARSGVKNLAMSAKHHSVTVVVLLELFKLSPKNIQEFNFPRELSDPKDIFPHSNPLVERIIVENPKYDLISSEYVDLFVTSLGGFTASGLYRILDELYNKEDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK2</accession>
    <name>A0ABV2ANK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Acyltransferase 3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002672</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001070">
        <property type="protein sequence ID" value="MES1921084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="282"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="312"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="363" mass="42184" checksum="9C8E418650BD451D" modified="2025-10-08" version="1">MAYSLMNAKFKSGNFEDIKTNKTKKRDLTIDFIRCVSVFLIIFVHITITTREIQHPRLEEREVFIGILYVYLQFGIPMLFYISGRSAAMSRKSEDGFKTVLTKSVKLILPVFPAHFLIVIPTGYLSSAYSRAICGNLHERNFFRFYWSYILDWVEHPFKCGFWWLWFLVVLWIVSIFSLPGLMALYGETINKKTVGCCYAALFVSLIIVSIFLKNWLLLFNSAYFGILICFPLLSPSVNLGNRIITKSKMFIPCIYGFASSILYVIVTSVLINQFYENVKQIYSILTFVHYTFFYSQGFVDVKRMKIESTHFLLEFATVVLSIAILVFGINLNNFKTGNTFAFPNFKSTFLRTTFILCSWIWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT0</accession>
    <name>A0ABV2ANT0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PUB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002871</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001251">
        <property type="protein sequence ID" value="MES1921327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09212">
        <property type="entry name" value="PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036339">
        <property type="entry name" value="PUB-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018997">
        <property type="entry name" value="PUB_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09409">
        <property type="entry name" value="PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00580">
        <property type="entry name" value="PUG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143503">
        <property type="entry name" value="PUG domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PUB" evidence="1">
        <location>
            <begin position="217"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="318" mass="37771" checksum="1CC1F4C0CD16A146" modified="2025-10-08" version="1">MTIISDLENYHNEKIAKICKKIQNLPQFDKAVDENKILKINSKVTEILSFYKTNQNKISKLAEKANVKDENERLYNEKTSQRILKMSSDYKKSIQILQKFNEDLKMVKIGNKVNNKINNDDEKLKNEEKIKKIEEMNKIDAEHAKRILEFKNKKAEKEQNFKIEFEKNKNIEKRRLELQNINENFLKKKNFGENAQKWPNLDKIEKILVIIKSLNIDHYKSSIKALSAIFSNIVSEPSFEKYRRLRKENPALKRDLLHSNYGETILRACGFIDKEFEIENELETCFFLEEPSTDQQDLWCKWFDLVKKVDGFLKLNNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT5</accession>
    <name>A0ABV2ANT5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002874</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001255">
        <property type="protein sequence ID" value="MES1921336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21531" checksum="946F34A372753B0C" modified="2025-10-08" version="1">MYDIQRGKSINESFPISLDEGIYLVDSSYDYNQIVKIYNKGLINLKFRNYVFKNELVFAVVIFKYQKMPTGTKFVLSGLVRINDKTIFLNLKVHNIFKNKIFCAIVQLQLPSKELADKNTIEIYVNHFDQKEMGLLNVKKTYSEKSVYSLSDEQKKIQHLALIKRKDVRMVSKSVTLIEPFKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY4</accession>
    <name>A0ABV2ANY4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Heat shock protein 60</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002911</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the chaperonin (HSP60) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001294">
        <property type="protein sequence ID" value="MES1921377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001844">
        <property type="entry name" value="Cpn60/GroEL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45633">
        <property type="entry name" value="60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="98"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="128" mass="13398" checksum="B5DCAA0963804243" modified="2025-10-08" version="1">MPNADQKLGAKIVRTAMRMPAQVICDNAGLEGAVITGRLLEDSENKIGLNKGMDALTGKFCDMVESGIVDPVKVTHTALSDSSSISGVMITTEAVICEKPKDGQKSDGGNPMEMPSSMRGGMNPMGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT4</accession>
    <name>A0ABV2APT4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">DNA-directed RNA polymerase III subunit RPC3</fullName>
            <shortName evidence="7">RNA polymerase III subunit C3</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">POLR3C</name>
        <name evidence="10" type="ORF">MHBO_003216</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 7">Component of the RNA polymerase III (Pol III) complex consisting of 17 subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the eukaryotic RPC3/POLR3C RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001631">
        <property type="protein sequence ID" value="MES1921685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055207">
        <property type="entry name" value="POLR3C_WHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039748">
        <property type="entry name" value="RPC3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12949:SF0">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12949">
        <property type="entry name" value="RNA POLYMERASE III DNA DIRECTED -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22536">
        <property type="entry name" value="WHD_POLR3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 7 10" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="DNA-directed RNA polymerase III subunit RPC3 winged-helix" evidence="9">
        <location>
            <begin position="7"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="110"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU367076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF22536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17953" checksum="34EB01A47AC602C1" modified="2025-10-08" version="1">MKRLYLQNSIKIKFGKHAARIFALLVQEKQLEDDQISDLALIPKEETRVLLYKMMNSGLVRLREIPIKPQEPSSNKIFYLWSVPTKLVFEAYKIEILYRNWIDLFERREKSVKKENGDSLNENSENLKEEETGFEEKLERLQKQIFLFEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW4</accession>
    <name>A0ABV2APW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003253</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001680">
        <property type="protein sequence ID" value="MES1921722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="34976" checksum="06416867BB0DE636" modified="2025-10-08" version="1">MYMKNGNIEKTMSLLNNSKKVEDVIKFERILEKNKEFEKLALFQLKSGKLEKAFDNFLLSKNLNKAFEIIKETKTENIEKLVRETKKEYYFQRKNIETKRKRYKDLIKRLRSIRFLRQNNFLGNISEVDNKSVISGSTNFTWNTVSSFSIVTETDFNNTGDGVERKKKKFGKSRKIKFGDPSTERFLLSDLAKLVPTKSFKKQIKDLETILLSLNLRSEFVLLKKDFSDFVNLITEEESKSMDYCENSLCGNNDFKWPEDLKKIIKSKNKKSENKNLVIVFNRFDQINEDIIEKWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ41</accession>
    <name>A0ABV2AQ41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003328</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001775">
        <property type="protein sequence ID" value="MES1921795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9002" checksum="A87E4DE00D9EEAC4" modified="2025-10-08" version="1">MQLLLLHSVKCKRLDLDKKSNIDKILPLFGIISDGLKYVFVVLGKAKIWISDVFVASREEDLLEIILVKGNFAGEIMADI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ62</accession>
    <name>A0ABV2AQ62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003334</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001784">
        <property type="protein sequence ID" value="MES1921799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="318" mass="36719" checksum="AA60B6FC4E493388" modified="2025-10-08" version="1" fragment="single">MNVLPNYDEALKKLLRKNFQIEFEKAFTKLKSVVSDPKFAEKAGENINRHSKYCAVFEKMLISYKKRALTTLSQIPIGIHPSGTDFIFFEYLAKFIDSFFELNFPNSNLVEQFKTALLKSEKDYNENGGFFVDKFVSSLQKLSSSKIDKSDDCLSIKFICDRLENLRFVNTFLPKFKNQLFEDIEKIGMDWTLSDQNIAAEIYVQIEKLLKLSGFCFVVFSFGESLFGNLFRKSSFESKSLLKEIPLALQSLKGDLNELDFAFVFDSIFGAFVESFEFLLLDSERLFSRENSATMSETISDLVEAFTNDNKRLLKDRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ81</accession>
    <name>A0ABV2AQ81_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003349</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001806">
        <property type="protein sequence ID" value="MES1921814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052462">
        <property type="entry name" value="SLIRP/GR-RBP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48027">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="71"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="185"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="27731" checksum="B70427EF79932E42" modified="2025-10-08" version="1" fragment="single">MDSKKRKVDEETQKPETGSESGKSFAVLRKSVERIGFEELIDFITLFSLEKDNEKFLKAIMEKINQKKELRKVFVRSIGFNTKEKDFKAAMEKYGKLEECLMVMDPETKTPKGFAFVTYADYSGAMNALKEGKVTIGDRTAYVHFAEYNYRSEKRKSPKFANANSNGNGQNYDIVTSEMDKRREHQIFIRNLGDEIDAETLKDVFKQYGPIEECFVPKDRETGRQKGYGFVKYYSPDSVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC1</accession>
    <name>A0ABV2AQC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">E3 SUMO-protein ligase pli1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pli1_1</name>
        <name evidence="7" type="ORF">MHBO_003391</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001859">
        <property type="protein sequence ID" value="MES1921856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004181">
        <property type="entry name" value="Znf_MIZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782:SF4">
        <property type="entry name" value="TONALLI, ISOFORM E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782">
        <property type="entry name" value="ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02891">
        <property type="entry name" value="zf-MIZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01360">
        <property type="entry name" value="ZF_MYND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51044">
        <property type="entry name" value="ZF_SP_RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="5">
        <location>
            <begin position="130"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="SP-RING-type" evidence="6">
        <location>
            <begin position="181"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="30944" checksum="FCDE4C9F9849B6D7" modified="2025-10-08" version="1">MFQIMRSQDQTRSRTFVLKLFSIKSKSPVNWLNFQASIYINNNFFELDMIELMKSKNKNTLNITKELLKNETNKRKTEIGIKIRTRSLQRVVCVLEITRKLNIEEMVYKTLDEKLSDDDFFQKYANFRICEICSEKSLYRCSKCKSSWYCGILHQKLNWPMHQYLCKSSDSKKTKCEEKIFDDDFNVISNTVSLKCPLTMKKIKIPAKSTNCEHLCCFDLENLFNLNFGSTDLICPICTKRLKPKVFSFIVIFTNLIKDDICG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP3</accession>
    <name>A0ABV2AQP3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003323</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001766">
        <property type="protein sequence ID" value="MES1921791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="67"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="107" mass="12751" checksum="03B3B6D098D12B26" modified="2025-10-08" version="1">MEDKDKDEENNKNLEENMEDKDKDEENNKNMDENMEDKDKDEENSKNMDENMEDNNSLVVNDERDPLSISVFVVALFCLMLIASFGIMTAIIKIKKKREQMEREYQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS7</accession>
    <name>A0ABV2AQS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003376</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001841">
        <property type="protein sequence ID" value="MES1921839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002259">
        <property type="entry name" value="Eqnu_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOSIDE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332:SF10">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="76"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="105"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="173"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="229"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="288" mass="32783" checksum="67E85C0E9E8985B6" modified="2025-10-08" version="1">MAKDKVKIAPSIKFCIAFIGLQIITTYITTISVADIWTQLFSRNIYTTFNYVGSIPNVVLALFIPLMMKFVSISKIFYINAVTQIVSCAVLTSIPTILIKSNRDVALAMTFLFLLISSSGFAITQTAIFAFAAEFSNQTVQFYITGLSIANLLYGLYFLPFPNNVPNLQNRTICYYALPLVVHFVSILVFYFTSKKITKKEERRGIEKDESELQRSFTESFKVVLKKKWLIFTLNFCFVLYCSYVLGHVLGLPLVYVSSDFVQSQSEGFLAQNPHDHFRDQRGLRSHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR74</accession>
    <name>A0ABV2AR74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003686</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002325">
        <property type="protein sequence ID" value="MES1922168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046907842" evidence="1">
        <location>
            <begin position="20"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="7816" checksum="B1A83D207B02B355" modified="2025-10-08" version="1">MKAITFMLLLQMSLFCCENKGDLKTNSSEIPSEQSLADGIKGMQDLNRLMNDANRNSVGLLSIGVVSLIALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR82</accession>
    <name>A0ABV2AR82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed DNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">REV3_2</name>
        <name evidence="6" type="ORF">MHBO_003704</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002368">
        <property type="protein sequence ID" value="MES1922190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.60">
        <property type="entry name" value="DNA polymerase family B, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1600.10">
        <property type="entry name" value="Palm domain of DNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017964">
        <property type="entry name" value="DNA-dir_DNA_pol_B_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006134">
        <property type="entry name" value="DNA-dir_DNA_pol_B_multi_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042087">
        <property type="entry name" value="DNA_pol_B_thumb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023211">
        <property type="entry name" value="DNA_pol_palm_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030559">
        <property type="entry name" value="PolZ_Rev3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45812">
        <property type="entry name" value="DNA POLYMERASE ZETA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45812:SF1">
        <property type="entry name" value="DNA POLYMERASE ZETA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00136">
        <property type="entry name" value="DNA_pol_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00116">
        <property type="entry name" value="DNA_POLYMERASE_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="3 6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA-directed DNA polymerase family B multifunctional" evidence="5">
        <location>
            <begin position="8"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="351" mass="40953" checksum="1E9ADB0607170675" modified="2025-10-08" version="1" fragment="single">IARKTLENAIKFANEIENCEVIYGDTDSLFIKIRSDKETALKIGKIIAQKISDSNPFPVELEFEKIYFPSILVSKKRYAGLKQEKSAGKWQQELEYKGLEVIRRDSFPLLSKLMDKALRTFLTNKNSHKNKKTIQNLFKNVKIFEKDFLFSKKCRAKIDKSYKSDRFLPLAAIVAKKRSSKNRRLAVLYGERIHFLINYKNSKKLADCLVPADSLKQGCNNTINFEYYQKLIENAFFRVFGDFFDFGEFKNSLRNFFRSQESVFQKMNTSYFGDGNKANEKSSVEEARNLLKRKEITDRFVKIRQICENCMDFSGVMGDIEDSNIGDLNGCTSIDCDIFFERRRNFFELTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD7</accession>
    <name>A0ABV2ARD7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003743</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ADIPOR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002444">
        <property type="protein sequence ID" value="MES1922235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004254">
        <property type="entry name" value="AdipoR/HlyIII-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20855:SF52">
        <property type="entry name" value="ADIPONECTIN RECEPTOR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20855">
        <property type="entry name" value="ADIPOR/PROGESTIN RECEPTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03006">
        <property type="entry name" value="HlyIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8267" checksum="03614431BC3D7BF4" modified="2025-10-08" version="1">MGAVYLVGAFIYAIRFPEVYLPGRFDYFFNSHQLWHVAVFMGAFIHYFAVLKMYDSSVSQFLSMSLRIQNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE8</accession>
    <name>A0ABV2ARE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Beta-adrenergic receptor kinase 2</fullName>
            <ecNumber evidence="10">2.7.11.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ADRBK2</name>
        <name evidence="10" type="ORF">MHBO_003548</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.15" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010002107">
        <property type="protein sequence ID" value="MES1922031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047696">
        <property type="term" value="F:beta-adrenergic receptor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24355:SF18">
        <property type="entry name" value="G PROTEIN-COUPLED RECEPTOR KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24355">
        <property type="entry name" value="G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RGS" evidence="9">
        <location>
            <begin position="34"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="8">
        <location>
            <begin position="92"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="33114" checksum="94C1AF320E75AF3E" modified="2025-10-08" version="1" fragment="single">NKFDKSLSLENPRAFYCAEHNNIGYYNKNEIRLIEDNIREGDIPTNIFDKIFKQIKNDIRFDLFPRFLESDFYKNYIRYKSLESQSIGSRDFTRLTAIGYGAYGIVSVAHKRDSGKAYAIKCFNKKQVVANDEARSVLEEKKLLAMMDSRFVTSLRYSYCDKDDICLVLDLMPCGDLKQLLTRHSTFSEELSRFYAAEILLGLEHIHSRGIIYRDIKLENILLDELGHIKISDFGLSVRKKEMKSYAGTPGYTAPEVVRGEYYKKTADFFSFGVIIYRFMSGMVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF2</accession>
    <name>A0ABV2ARF2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">GCN2</name>
        <name evidence="10" type="ORF">MHBO_003756</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002463">
        <property type="protein sequence ID" value="MES1922250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050339">
        <property type="entry name" value="CC_SR_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11042:SF160">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11042">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-0652">Protein synthesis inhibitor</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="10"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="23237" checksum="BD0B12B0CE04E607" modified="2025-10-08" version="1" fragment="single">TSKTRYERDFDQIAELGAGAYGVVYKVRNKLDGMYYAIKQIVINDRHKMKMLEKLLSEVKAIARLSHVNVVRYYQAWIEDVDPIDFSLGDSYDSSQEMLDKLGVECYDSNLEDYGSDWEIGREMIKNREEEKEGDKVTVLFIQMEYCEGDTLKNLIDSEKPIPKELIWKLFVQIFEVVDFIHSKKTIHRDLKTTNIFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM6</accession>
    <name>A0ABV2ARM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003829</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002584">
        <property type="protein sequence ID" value="MES1922321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="290" mass="33264" checksum="3782CEA576AA0904" modified="2025-10-08" version="1" fragment="single">MNNISKFENRPKNDITNLKLSAKPQNPEKSKNTLNFNQKKFLITRKYDQNTLLYINLILNNKSIFLTKDEIDFLQNLDQNIKTLSTKFNRNSTKIGKNEHSQYNQIFTQKTKSFFEKYLFSQNHFSKKSQILEKDDSRFCDKKILFPLFALLRLLSTFDQSISKFLFTDNNLEFVFAVCSLQEMTPAIKTTAFSALCSLFAHEDALWISVFRNGKKRDLLLDIALTGLSGNFGELEGISASALLLNFVMASSDERLASEFGLLEIGDELRVRTVSAVFSGINRKNQVEIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN3</accession>
    <name>A0ABV2ARN3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Histone H2A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">HTZ1</name>
        <name evidence="12" type="ORF">MHBO_003653</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the histone H2A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002268">
        <property type="protein sequence ID" value="MES1922139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00074">
        <property type="entry name" value="HFD_H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002119">
        <property type="entry name" value="Histone_H2A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032454">
        <property type="entry name" value="Histone_H2A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032458">
        <property type="entry name" value="Histone_H2A_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23430">
        <property type="entry name" value="HISTONE H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16211">
        <property type="entry name" value="Histone_H2A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00620">
        <property type="entry name" value="HISTONEH2A"/>
    </dbReference>
    <dbReference type="SMART" id="SM00414">
        <property type="entry name" value="H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00046">
        <property type="entry name" value="HISTONE_H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 8" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="10">
        <location>
            <begin position="85"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="Histone H2A C-terminal" evidence="11">
        <location>
            <begin position="169"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="21"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF16211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1922139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="21128" checksum="BDC7E87B19206834" modified="2025-10-08" version="1">MDKGGGKIGIPVSTVAGKMPVQTSVKMPAPSAGLKTPAKSTADKTPAPSVVPGGKVSLPTGVGKVVPGGKGKSGKGKGKAKGGKGKGKKTPISRSMRAGLQFPVGRIHRNLKRRAMGDIKVGGNASVYCAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDHLIKATIAGGGVIPHIHKALLSKSQKSKKSKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF3</accession>
    <name>A0ABV2ASF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PI3K/PI4K catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004116</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003176">
        <property type="protein sequence ID" value="MES1922600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1070.11">
        <property type="entry name" value="Phosphatidylinositol 3-/4-kinase, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050517">
        <property type="entry name" value="DDR_Repair_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000403">
        <property type="entry name" value="PI3/4_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036940">
        <property type="entry name" value="PI3/4_kinase_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018936">
        <property type="entry name" value="PI3/4_kinase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139">
        <property type="entry name" value="ATAXIA TELANGIECTASIA MUTATED ATM -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00454">
        <property type="entry name" value="PI3_PI4_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00146">
        <property type="entry name" value="PI3Kc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00916">
        <property type="entry name" value="PI3_4_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50290">
        <property type="entry name" value="PI3_4_KINASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PI3K/PI4K catalytic" evidence="3">
        <location>
            <begin position="1"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="21962" checksum="69667F1FBFD4B503" modified="2025-10-08" version="1" fragment="single">ENEKKLKTFRKLVSKVDETVISKRLWISSFDIHSFYVKRKVLTISLATMSMIGYVLGVGDRHLWNILLHLKTGKIAHIDYNVCFDKGKRLAIPETVPFRFTKIFRGAISPSNINLFKSTCCKVLVTMRQNRKTLIAILSKLEKCPLENWRKSCKKEILKVEEKLKNVFEIFAKFSLFELFVNATREFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ6</accession>
    <name>A0ABV2ASJ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DOCKER domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004154</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DOCK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003290">
        <property type="protein sequence ID" value="MES1922635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043161">
        <property type="entry name" value="DOCK_C_lobe_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027357">
        <property type="entry name" value="DOCKER_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046769">
        <property type="entry name" value="DOCKER_Lobe_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06920">
        <property type="entry name" value="DHR-2_Lobe_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51651">
        <property type="entry name" value="DOCKER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DOCKER" evidence="2">
        <location>
            <begin position="146"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="32579" checksum="2BB84D7A5ECB812C" modified="2025-10-08" version="1" fragment="single">LFRKLSLKRSDKFLQDFLGYILQYAIHPNEEIMSKTCFFVFYIAKIAFDVHKNLKRVKHAIITSLYRKGWIVSLKQYEINFCCQIIRKAQDYCTKETDTDFHQQLLSIIDSTNDLFVVFGELSKMRSQKEHCDFARYEEKLNETSGAYYKIPEIRLNWIKKLTKHHQVRKNNVETAECFLKLCSIIEEDFDDVTIARRGFEPIDEKIKEKEQSNIENYMDNANQYFQKGEFLERSTILCMEQLLPLLLEGKKWQKLAFTHRVMSKTYERLASE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN9</accession>
    <name>A0ABV2ASN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003459">
        <property type="protein sequence ID" value="MES1922696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053235">
        <property type="entry name" value="Ser_Thr_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24361">
        <property type="entry name" value="MITOGEN-ACTIVATED KINASE KINASE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18690" checksum="873E61E23A7063C1" modified="2025-10-08" version="1" fragment="single">MHQHLYVNRIKKYFRMIIRGLEYLHDKQGYVHCNLKPKNILIASDDTVRISNFKSCLEPYEYQDESIIATLIKPPGFDYKSRIGFDLDSWQVGLALIYVCCGPYPENLNPQDLLEFFERNIQMEDYKEFRPILEQKLLQTDNKKRLWGKNLPIAADDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR2</accession>
    <name>A0ABV2ASR2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Major facilitator superfamily associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004238</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003495">
        <property type="protein sequence ID" value="MES1922713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="151" mass="17542" checksum="27CEA7B8A20973BE" modified="2025-10-08" version="1">MVPFMRSWIRAKNYVTYCLPFLALIYMLIGDYPIDKTSLGYETYNVVTYILLIFRDWIFWMSYVLCNVVIMEGIVLKNQGIELNGFCAALYLFSFNFGDAAGLLLGNVVFKMYGYNIVTFSTMILLCVGFVTILIIRFWKKIKNFFSSLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX3</accession>
    <name>A0ABV2ASX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA polymerase delta catalytic subunit</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">POLD1_2</name>
        <name evidence="1" type="ORF">MHBO_004300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003676">
        <property type="protein sequence ID" value="MES1922776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.342.10">
        <property type="entry name" value="DNA Polymerase, chain B, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050240">
        <property type="entry name" value="DNA_pol_type-B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10322">
        <property type="entry name" value="DNA POLYMERASE CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10322:SF23">
        <property type="entry name" value="DNA POLYMERASE DELTA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17644" checksum="61F35C7E1AD49A8F" modified="2025-10-08" version="1">MASIHGGIKKFKANTNNWKRTPSTKINNKNFLMQLLDIDITLQNKKSIFRIYGVDNDGNSAVFYVHNFKNYFYVEIPSDWSKTEEEFAEGVITTLKNNLRTEFEVYTDIVEQKSILGYSFGQTLKFVQIFFSAFNLISSARNILYKVISKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT06</accession>
    <name>A0ABV2AT06_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004329</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003774">
        <property type="protein sequence ID" value="MES1922806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12207" checksum="F482173A8192B9D3" modified="2025-10-08" version="1">MQRLLKNIKKAKFSKNFSQFQKYFLVTKNLAKKSNLFLYGISLYGIVCFVKKQNLLHAFSQNDSLLRFFYIVNDSNYQDARRYIANGISINENHPCGFGALHVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT21</accession>
    <name>A0ABV2AT21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acetyltransferase 10, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">NAT10_2</name>
        <name evidence="1" type="ORF">MHBO_004341</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003806">
        <property type="protein sequence ID" value="MES1922816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8387" checksum="B02036B7C019DF07" modified="2025-10-08" version="1">MGYGSESVKQLIEIFSKNSKTEISQNFKNSETDFSEILNSSKNNFQNLQQNRSKNFSKKANLILKFCLNFATN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT45</accession>
    <name>A0ABV2AT45_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Serine hydroxymethyltransferase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004067</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SHMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003074">
        <property type="protein sequence ID" value="MES1922552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049943">
        <property type="entry name" value="Ser_HO-MeTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019798">
        <property type="entry name" value="Ser_HO-MeTrfase_PLP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680:SF35">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00096">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Serine hydroxymethyltransferase-like" evidence="6">
        <location>
            <begin position="2"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20081" checksum="4543E8AF0BFDC5BF" modified="2025-10-08" version="1">MVDFEYFEKSAKRFQPKLIVTGGSAYPRDWDYSRFAKTAKILNSVLMADISHFSGLVAAKILNDPFEHCDIVMSTTHKTLGGPRGALIFYKNELKSKINFSVFPHCQGGPHNNNIAAIAVRLKEISENKKKYVEDCEQIVSNAKELAKCLSDNGFHIMAGGTDTHLILWNLKKVSNNFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT86</accession>
    <name>A0ABV2AT86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004413</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003961">
        <property type="protein sequence ID" value="MES1922885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5993" checksum="B93656AA84A995CD" modified="2025-10-08" version="1">MEAWTDFSINGETDEQDILHNIDRTHIRRQSVISVFMHRHRLPQGHQQNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA9</accession>
    <name>A0ABV2ATA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003270">
        <property type="protein sequence ID" value="MES1922627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10636" checksum="3AB3D6154D6E0958" modified="2025-10-08" version="1">MLSVLTKMFAEERGSWRTLHEENVGKYGRGYVVLWMTSFLPLEKSNSSSIEIRTRKQSQVKCISSSRLITYLVSKCETGYNWTINTKAFYAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG6</accession>
    <name>A0ABV2ATG6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">FAD/NAD(P)-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004491</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004157">
        <property type="protein sequence ID" value="MES1922960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055275">
        <property type="entry name" value="Ferredox_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48467">
        <property type="entry name" value="GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48467:SF1">
        <property type="entry name" value="GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="198" mass="22860" checksum="E6502B2E270AE358" modified="2025-10-08" version="1" fragment="single">NGKIVKDKSLNVEGEHLPNVLNARDFVGWYNSFPDHKSVHIGNHQNAVIIGNGNVALDCARILSADISVLEKTDISIQALQKLKNSSIKNIYIVGRNGPLESKFTNKELREMTNIKNSVIHVNDKLQKNLPKNFSVLEQRIITKKIQIFRKMAKDFSRKDNYSDLNKIIDFYFWTKPLKFVSLNDNLVRVYLDRKFFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH3</accession>
    <name>A0ABV2ATH3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Translation elongation factor EFTs/EF1B dimerisation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004210</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EF-Ts family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003422">
        <property type="protein sequence ID" value="MES1922687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14275">
        <property type="entry name" value="UBA_EF-Ts"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.20">
        <property type="entry name" value="Elongation factor Ts, dimerisation domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00050">
        <property type="entry name" value="EF_Ts"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036402">
        <property type="entry name" value="EF-Ts_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001816">
        <property type="entry name" value="Transl_elong_EFTs/EF1B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014039">
        <property type="entry name" value="Transl_elong_EFTs/EF1B_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11741">
        <property type="entry name" value="ELONGATION FACTOR TS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11741:SF0">
        <property type="entry name" value="ELONGATION FACTOR TS, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00889">
        <property type="entry name" value="EF_TS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54713">
        <property type="entry name" value="Elongation factor Ts (EF-Ts), dimerisation domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Translation elongation factor EFTs/EF1B dimerisation" evidence="4">
        <location>
            <begin position="96"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="19431" checksum="A20914EF504FC4BA" modified="2025-10-08" version="1" fragment="single">MSFVRFNRSKNINKVINLNYRTFSAIPIPLIKKLRMETKSPINDCRKALKVSLNDFNSAQEWLRKNSCVVREKIKTHLTKNGVVQLSVSADKRSGCILQFETETDFVSKNAIFNRSISSISQAIIDSKDEIGRGDLNIETVKKVALPGEKQNVSDLINMTMNSLKENIQLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK4</accession>
    <name>A0ABV2ATK4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SNF2 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004533</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004298">
        <property type="protein sequence ID" value="MES1923000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623">
        <property type="entry name" value="CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SNF2 N-terminal" evidence="3">
        <location>
            <begin position="2"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15222" checksum="D2EB69E9789FAD32" modified="2025-10-08" version="1" fragment="single">MNRFKARTKIMLTGTPLQSNLNELWTMLNFVNSANFSDPALFSDNSKVAEIIKPFILRRLKKDVAEKIPPKKETIIEVELTRIQKEYYKKVLLMYKDTLAKDENRNLPKLVNIAMQLRKVCNHPYLLEVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS4</accession>
    <name>A0ABV2ATS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Canalicular multispecific organic anion transporter 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ABCC2_3</name>
        <name evidence="3" type="ORF">MHBO_004596</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004511">
        <property type="protein sequence ID" value="MES1923061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050173">
        <property type="entry name" value="ABC_transporter_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24223">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="15630" checksum="D69DCA419F7A1EE2" modified="2025-10-08" version="1">MLNIIRFPLSMFPTVLNSSIVTFVSAKRFSRFLNGKDTVPNKATPDFRQDEDFDVYLRNTSFFWDRDCEKAAIKINGEENVLKEIKIGKGELVMITGRVGSGKSAFLGSLLGELTQKDGDAVDLGEVAYVAQTAWVLLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS6</accession>
    <name>A0ABV2ATS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004553</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004386">
        <property type="protein sequence ID" value="MES1923019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6900" checksum="590A80BF43651F39" modified="2025-10-08" version="1">MRIDFIWFRNKSRGNDNTEELLPPMTDEQEGPFAVTDAQTVLDHDPITSDHFGVLAVLALN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV6</accession>
    <name>A0ABV2ATV6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WKF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004628</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004621">
        <property type="protein sequence ID" value="MES1923089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019327">
        <property type="entry name" value="WKF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22306">
        <property type="entry name" value="CHROMOSOME 7 OPEN READING FRAME 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22306:SF2">
        <property type="entry name" value="CHROMOSOME 7 OPEN READING FRAME 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10180">
        <property type="entry name" value="WKF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WKF" evidence="2">
        <location>
            <begin position="65"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="18002" checksum="B289DDA721EF6B89" modified="2025-10-08" version="1">MRRLNKKERAKRIKKDSTKQSKKKRIRKRETAKSDKILPENKNEDNSTAKTKTTDSQIAKKAKIYLKKWKKSKDWKFNKNLQNKIFVIATNEKILKNKYFRIFLKYIEKSNGNCRNLLRIEMEKILENSKSVSITDKITRAKQILKILTIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU26</accession>
    <name>A0ABV2AU26_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ubiquitin-protein transferase activating protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CDC20</name>
        <name evidence="6" type="ORF">MHBO_004725</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005015">
        <property type="protein sequence ID" value="MES1923180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033010">
        <property type="entry name" value="Cdc20/Fizzy"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918">
        <property type="entry name" value="CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918:SF8">
        <property type="entry name" value="FI02843P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="4" id="KW-0498">Mitosis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="25593" checksum="45CC11E1E691134B" modified="2025-10-08" version="1" fragment="single">VGRFEAIVEIYNFSNYFLEPKKDKISRDLKFSQDYKVLQTHGFRLQNSSGRVGALCWSKRRKILFCASAENQIFAFKFSGRSPRLVALLSGPKAGACRLRWSPLGSSLAIGGRDGNVYLFKESDIVASAKSATHREHEKIDRKELKFGQKAVVKEVVMAVEWCPWKSNLLAVGTASGKLQLFDLRQKSKRLEKSAEVQSGRGAVTGIVFLPQHREMLSSHGCVKDKNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU50</accession>
    <name>A0ABV2AU50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004751</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005107">
        <property type="protein sequence ID" value="MES1923208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17181" checksum="672D4DAA1BBE78A7" modified="2025-10-08" version="1">MRLLIKVFRRTYKKKVQRRVLKDILQTGKDREWEKQQSKERTEKLVNLVSTIFVVAGFGILSIPLYRALCQSLGWDGTVDRENVKAVKKMKLYQQEREKKDSSGNFQPPEPLSVRFHSSSNSPTLKFTPCQEKIWSFFPKKLTLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU96</accession>
    <name>A0ABV2AU96_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">tRNA synthetases class I (E and Q) anti-codon binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004488</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004149">
        <property type="protein sequence ID" value="MES1922957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="entry name" value="Ribosomal Protein L25, Chain P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050132">
        <property type="entry name" value="Gln/Glu-tRNA_Ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_bL25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_bL25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049437">
        <property type="entry name" value="tRNA-synt_1c_C2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097:SF4">
        <property type="entry name" value="GLUTAMINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097">
        <property type="entry name" value="GLUTAMINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20974">
        <property type="entry name" value="tRNA-synt_1c_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="Ribosomal protein L25-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA synthetases class I (E and Q) anti-codon binding" evidence="2">
        <location>
            <begin position="25"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15172" checksum="A63C33C066D728AD" modified="2025-10-08" version="1" fragment="single">YNNDKTISHLECSVAEDDGPNPKGVLHWVSPTDIKKNTVEVRLYENLFSAKKPGSGKKSWLEEINKNSETKRKAVVTDYLLQNLKCWKGKPYDLRYQFERIGFFCKDEDSTDDKIVLNRIVSLRTRKVYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA6</accession>
    <name>A0ABV2AUA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004779</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005221">
        <property type="protein sequence ID" value="MES1923235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="8590" checksum="BE53F45D8E242ADA" modified="2025-10-08" version="1" fragment="single">LSLVYETPATLASLVKASVTSDMAREEIMASAALPDFVSLSLSVPPVSDTRPGADNQTSVGDSLSLAAAGNPINFGTIQQSQLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF1</accession>
    <name>A0ABV2AUF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005442">
        <property type="protein sequence ID" value="MES1923286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15443" checksum="D6E1D5E65760B691" modified="2025-10-08" version="1" fragment="single">PVNAGLYEAAKEVVNLFVYDANSIGDKPRAIELLSDALANSKPAETFEDFWDRVIDKTDGDTRISNVTMNYMYKHCMDAWDKPKECGEWCEHWQEWKDLEGSGASETLFVDVQYCFVAEEFNPTYGMPGCPHGGSDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF7</accession>
    <name>A0ABV2AUF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Splicing factor 3B subunit 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SF3B3_2</name>
        <name evidence="2" type="ORF">MHBO_004845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005481">
        <property type="protein sequence ID" value="MES1923295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050358">
        <property type="entry name" value="RSE1/DDB1/CFT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004871">
        <property type="entry name" value="RSE1/DDB1/CPSF1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10644">
        <property type="entry name" value="DNA REPAIR/RNA PROCESSING CPSF FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03178">
        <property type="entry name" value="CPSF_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13872" checksum="A196BF0AA8DE4BF4" modified="2025-10-08" version="1" fragment="single">QTEVAEVPTAFCPFQGQLLAGVGNILRLYDLGKRKLLRKSENRQFPGAIRKIHAYDNRIYVSDMTSGTFMLEYTAADKSMKIFADSVSKVYTTDSILVDYNTVASSSLFRHFANFSTFVRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH3</accession>
    <name>A0ABV2AUH3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004866</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005584">
        <property type="protein sequence ID" value="MES1923311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10768" checksum="F0D357E40575E9F4" modified="2025-10-08" version="1">MNPLWLITQDHDAVIHYDKAHDALYTLPQITDGVYMGINLYCSSSFLGTFDSVQEAVMEIDKIQQCTELHYFINDFKDWEDIGNGSFDWEVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL1</accession>
    <name>A0ABV2AUL1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004617</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004571">
        <property type="protein sequence ID" value="MES1923078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13068" checksum="59DA943FC9980158" modified="2025-10-08" version="1" fragment="single">MNKRRSDTFVKEFFKLIEELLERDGIVQPQTLDGLEDLSNAPISYIYDQVKESTSIKNEETFNNYPVVDEAEITTNRDKTQQEKPEPLIELASKTGSTLDKVQSIKKEQKKED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM3</accession>
    <name>A0ABV2AUM3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005796">
        <property type="protein sequence ID" value="MES1923356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="8413" checksum="C13A99CDE5AD24E3" modified="2025-10-08" version="1">MDEVKGYDEKEDELEENNIKKTKDQKKKGQGIYFHNNLHPMSFFNLNEYTIVYPTPKKKCTNFTFYRVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ7</accession>
    <name>A0ABV2AUQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004971</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006035">
        <property type="protein sequence ID" value="MES1923405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18020" checksum="1F007926B528986D" modified="2025-10-08" version="1" fragment="single">TTTVDEEDGYSQDTQSQGSQSALDLSQPSEADTCMSSQYSDATVVNISRLESLNAFLTLCDVSPVKKLNNPLSKSSERTKKRYMDKAQQCFTAMIETIAPNEADVIWNSIINYQAERCAQPSEDSNMLKNIYLNAENWQFRRQVLSIIVERMFLEEAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV82</accession>
    <name>A0ABV2AV82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Endoplasmic reticulum vesicle transporter N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005164</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ERGIC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006933">
        <property type="protein sequence ID" value="MES1923570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045888">
        <property type="entry name" value="Erv"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039542">
        <property type="entry name" value="Erv_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10984">
        <property type="entry name" value="ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10984:SF25">
        <property type="entry name" value="ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13850">
        <property type="entry name" value="ERGIC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="28"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="Endoplasmic reticulum vesicle transporter N-terminal" evidence="3">
        <location>
            <begin position="7"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13292" checksum="9908396DC73876DE" modified="2025-10-08" version="1" fragment="single">MRFLKKIRQFDVFREVHSEFTQTTTSGAVVSIICVAVMSLLIFSEFVSFLSVKTSSSMFVGTPDKLRDDDEKLRININIDFFNVECSLWYLDAQDVMGSHHVDVTNTISKKATSKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA7</accession>
    <name>A0ABV2AVA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005192</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007050">
        <property type="protein sequence ID" value="MES1923593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="16813" checksum="0278B02372C87129" modified="2025-10-08" version="1" fragment="single">MIYDECSRFPDGMWTENEGNMANPDGGHVTWVAVSNPREPRGGFVRCFYDWSSVWTGFQVDMEEVNQDTNGGFDEHIKNAKILYGGEHTPEYRCYIKSEFTLSVGTGIFTVAELQRLRYSEIDLHASALARSQIGVDVSTGVSKASSAICV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVS2</accession>
    <name>A0ABV2AVS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005121</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006681">
        <property type="protein sequence ID" value="MES1923534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13513" checksum="9EF340D7383BDD12" modified="2025-10-08" version="1">MRKEQEHASQQEAILTFEKAIDMLEQTISQNVIANNRRLSDLTSAKTLVSVQELSTTVSSHLSLTSFNEEDNKLQILVEKTKLQMDDVNAEMSSVIVDAPMLTFREQVDSIEDAEVTDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE21</accession>
    <name>A0ABV2AE21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000026</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="336" mass="39128" checksum="35B0E39BEDE218D0" modified="2025-10-08" version="1">MLKTIEETRRFEQCVYQIKKEIKEAEKRHKTTKNLLNKYKHQKTKPINFRENKFAKKQERASENLSKSMSQLKISNKDVPTFKNTLKSNLSKSFQISKTEITNQKIKPHSKTSFEEPENKYLKITDIGREASAKTIALYFDRSSEQNKIVWVAVFTSRNGILSTVINFADTEFAQTAFLYSKTHLLIGRTMRAKFLSNFEISLLFQNKVLSVYLNSKFSELDWRKDFENCRAINIDNKQNLTFQNFNKQSLNACEDADRREFAAKNENSNWFSGGFSHSKDNGRNFCCQESGLYRPKTFVDSNIQLAPEIQWTAEIVNRKINEGICKIVSEQLTVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEV4</accession>
    <name>A0ABV2AEV4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Calmodulin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000204</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000026">
        <property type="protein sequence ID" value="MES1918196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050230">
        <property type="entry name" value="CALM/Myosin/TropC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048:SF0">
        <property type="entry name" value="CALMODULIN LIKE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048">
        <property type="entry name" value="MYOSIN LIGHT CHAIN 1, 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0106">Calcium</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="7"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="98"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="104"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00020786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="26839" checksum="09A05909A0850887" modified="2025-10-08" version="1">MTDCSNEQENHVREVFSLFDADGNGFVDSSDVGNAMRSIGQSLTETDVRNIKDEIDSKHKGKVDFKLFSDLIKRYNKKPQTKEEILDCFRKQRREGLQSGIDASSDHDRRQAQRTGSERVFEFRRRRQTRQHRLQKVGAENVGFLKIRFCFYCNCSARIDGGPIPSAALTTPRPSVSVCTFRQSKAYAQPSQCKLLNSRKTLRVTVLTLKRKLRTCQLYLNLLMLREFEPRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF18</accession>
    <name>A0ABV2AF18_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Cation-transporting P-type ATPase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000250</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000033">
        <property type="protein sequence ID" value="MES1918256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.150.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006068">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004014">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059000">
        <property type="entry name" value="ATPase_P-type_domA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42861">
        <property type="entry name" value="CALCIUM-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00689">
        <property type="entry name" value="Cation_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00690">
        <property type="entry name" value="Cation_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00122">
        <property type="entry name" value="E1-E2_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08282">
        <property type="entry name" value="Hydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00121">
        <property type="entry name" value="NAKATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00002">
        <property type="entry name" value="C1.7:_P-type_atpase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00831">
        <property type="entry name" value="Cation_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="Calcium ATPase, transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="55"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="78"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="259"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="288"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="833"/>
            <end position="857"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="931"/>
            <end position="950"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="962"/>
            <end position="980"/>
        </location>
    </feature>
    <feature type="domain" description="Cation-transporting P-type ATPase N-terminal" evidence="9">
        <location>
            <begin position="8"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="994" mass="108828" checksum="D3D41292E45F7DAE" modified="2025-10-08" version="1">MDSACFKDTKQLVVELKTDVTNGLAESNVLKARKQHGRNETSISELFAEQFGDRLVIILLISAAISFLLGFLENNDSIFSSFVEPAVILLILIANAVVGVVQEINASNAIERLKELEAKSTYVLRNSSLLRVDSAELVPGDIIKLTTGERVPADCRVQAITSEGDFMCNESMLTGESVAKSKQARALKMNNSIVIQDMANMLFSGTLVVRGSCMALVVKTGGRTELGKIQGELERINAEKKRTPLQQQLDKFAEQLSKIILFVCVVVWLINIGHFTDAQHGGVLRGAVYYFKIAVTLAVAAIPEGLPAVVTTCLALGTTRMARKNAIVRTLPSVETLGCTTVICSDKTGTITTNKMNVRSLFTANSLPSLVPETKIAPFRFKLSGTDYSTKGTIRDENGKILHEPLQNPALRRIAQISEFCNEAGHVPGTRSDKVVGVPTEVALRVMVRKLGGAPDGARKRLFDFDRERKIMSTIDVLANGGDGSSFQRERKSAFVHVKGAPEYVLSRCDSIFCGDGENLGEAGSKKLDQENREFLIAEMVKMAGDGLRVLAFAYKKLNLEDKDEAELVFGEKKTFARKSEDGYYGHEDNLVFAGMAGILDPPRAEVAESIRSCYRSGIKVKVITGDHKATAESICRRIGIFGEDEKLKGKSITGQEFMRMGEQDQLIAAEEAVLFSRVEPRHKLMLVRLLKAQGNVVAMTGDGVNDASALRSADIGVAMGSGTQVAQEAADIVLQDDNFGTIVRAVEEGRAIYANTKQFIRYLISSNIGEVASVFLTALFGLPEALIPVQLLWVNLVTDGLPATALGFNPVDPDEMRHPPRRRDKHIIGVWLLTRYAIIGCYIGFATVFGFVWWHLHFAGGPRITFEQLRNFERCGSSDMFGAGFDCKIFTEKAPATMSLSVLVTIEMLNALNAISENKSLFAVPPWRNMFVVAAVLLSFALHLVILYFPFFQTMFSTAPIGLAEWTAVFALSAPVLVIDEMLKYLTGVINEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF24</accession>
    <name>A0ABV2AF24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA export factor gle2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">GLE2</name>
        <name evidence="4" type="ORF">MHBO_000269</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000036">
        <property type="protein sequence ID" value="MES1918282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10971">
        <property type="entry name" value="MRNA EXPORT FACTOR AND BUB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="260"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="38260" checksum="73B9FA1E013A37C3" modified="2025-10-08" version="1">MYNYGNKATDNTDTPVPQSPANISSVCISAQNMIAATTWDGQVCVWSDSGTSVQCKTSKKFNAPLLDIDWIGNFAAMASGDKSVLIWDPSSNQHKELGKVLPSRLARRTGSQTLRAEAASEYGRKRKLGRHSPLLGHEVCSLTRRKEGEAMKCNVNERVYAMDSKSFVLAVGTAEKGLLVFDTRNPSNPVKTFASPLRLQTSCVSVFSELDGVCVGSIEGRISVKYFQNDKFSVKLSASFNFKAHREKTQNNQGELATSVNAIEFHPKAKMFVSGGSDGNIALWDKAAKQRVKFFAKVPEAITDIAFNENGSLMAYAMSYDYSQGKNAKNNPSSAVYLKRVTEKDFTAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP1</accession>
    <name>A0ABV2AFP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000446</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="161"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="80"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="100"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="161"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="245"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="32254" checksum="FD6E703328C020D7" modified="2025-10-08" version="1">MANNFYFIQITNLCTFRFFLAIYGETEEEEEKEGKFNLLKHSKCSNCEKTDGPFEKVDDHHLCDVCLDKYRNEGFELKPEKKHHRKKSKSRNRDSENNSRKKKKKKKSQSHHKTHLDVPDGSSFVLEEKTEGSSVASLDEEIANGEEHREPIETEEIIKIKQEKAETTTEKAETTMEKAETTTEKAETTMEKAETPTEKAETTTEKAETTTEKEADVSEIKSHEQTEKVDQKETRKSIVSLNKQSKVETKQKSDERTNELEKQISEMEVSFFKENVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU7</accession>
    <name>A0ABV2AFU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000496</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000079">
        <property type="protein sequence ID" value="MES1918541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1720.10">
        <property type="entry name" value="endopeptidase domain like (from Nostoc punctiforme)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47112">
        <property type="entry name" value="PX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47112:SF1">
        <property type="entry name" value="PX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="262"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="356" mass="40720" checksum="F599D813AB8BE095" modified="2025-10-08" version="1">MNYALMAIDKNSNENTFKMEEDLMLMAAKKFIEKAFLASAMASGLAFSWRHSNFLLKDKTTTSEEKKYFQPNSAEDWINEDLKTGDIVLFRRRLSIFRPYKSLLCLATRRALAGDFDHVGVVVTDPDRRIPFVLENGLNGISYTSFEDRVMDSDDKDIAVRFLARKEISEVLGEKLHSFVKRQTGKKVPSDKNEKPKLSEKADFGRRKDDFFSLLKATPEKVDPDFTLFHGLCVIESTKKLKKAIVASEVLGRQSPELDEQIANAEKVIERHNKTLSESKKRYEMEQNRPQYCSASLVAKTLQILELLPSNIRAECYSPDSFNEIEIRGYSQLKNACLPLKNGARLNSVMFFKDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY0</accession>
    <name>A0ABV2AFY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000341</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000049">
        <property type="protein sequence ID" value="MES1918369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="32308" checksum="EB7886EBF7C5F09D" modified="2025-10-08" version="1">MNIKILDENLPENFLNDLCFNRTKSFFVDNKFYVFVNRSYNETIKLLLKNLIFSGFYPPLNITFHYKTATVFIFKIQEYSKRLKDVPKINGSNYKIYKDNFIRQKNNYVLKTADTDENVFCDINGNIFYKFITKFCVSPEISHLPSFQSFLARFGNLKKDESVENLWEMDFFKIGQLNYLPNVFLCQYFPRYDKVHATFLDGTLEKILILAGVKIEGKGCHKDFVVTVFGRLIDLKNSNLFFSGYVLLKTIHDNRNNLYYSMFTRAKDPLFQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY4</accession>
    <name>A0ABV2AFY4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000280</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48037">
        <property type="entry name" value="ATPASE E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48037:SF1">
        <property type="entry name" value="RRM DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="11"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="114"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="114"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16745" checksum="1259E7C39998375B" modified="2025-10-08" version="1">MATTDPNDTKSTLFVGGFPPEVNEKVLHAAFITFGEIKYIQIPMHPLTEKHKGYGFLEFEEAADAADAMANMDRSEIYGRVVHVNYAKPVKFTDKNKPVWAQTNEYIDILKKTQEEQHEKERKKQEDFMKQLEEQAKLPVGPSSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ4</accession>
    <name>A0ABV2AFZ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000184</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="18009" checksum="24A99539DB41F453" modified="2025-10-08" version="1" fragment="single">IKYKMETSTLEITITVYVITYIYTIVLFCIKLYRSKSCLTMDKEFLNDQLKNVLHDKTTHDKEITVGLDEINDKVKRAYFLFMKTKKLEKIIENLNVKEEHRDGLGERLKNIKSEYQTSGKVLGQIFTRYILNIDRKRRTAEENSRKELNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG04</accession>
    <name>A0ABV2AG04_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000559</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000095">
        <property type="protein sequence ID" value="MES1918615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="23283" checksum="DAB59BF22558ADA5" modified="2025-10-08" version="1" fragment="single">MDKIISQFDDIVESYKLDKHSEVISKTKIFLNGISKNFKRFVKTSSIKILDIVVISPLENINQKICDFVISISILFIHSIFKSNGDKTKTPIFNFIVNLLHPFVIKLKQKNKILGQKRLQQLRKICFKFICIKNEQNSENSKIWTNLAKIKNFLILLFSQTNTNFNDLNENLFLVKSFFDCEKDLFSDNAKIYSKFLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG13</accession>
    <name>A0ABV2AG13_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005312</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000091">
        <property type="protein sequence ID" value="MES1918598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046003626" evidence="2">
        <location>
            <begin position="19"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20414" checksum="63D6D8A8F1ECA328" modified="2025-10-08" version="1">MMRFCYLLSLFAVLASMAVNSCKFCPFLDNCFREFPSKTKLHVFGHYVDFNNLNDFFVFLTFSFIFCGILLLNKPRKFKIDMALAIIICYCFYLGNHLMVFLLKFLFGDSNCNTKPNSVSGHFNFYVYFLLSLRHIFTAFKKSQVEEKFFFLETSYVFFALLSFLNLSXXXYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG31</accession>
    <name>A0ABV2AG31_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000584</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000099">
        <property type="protein sequence ID" value="MES1918645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="11079" checksum="98C60D66B0C4D15F" modified="2025-10-08" version="1">MKNRKNLVTCGRMSFEESKNLENPEICVGTFVNTVCRIKCKNEFIEEHPKIFPKCVVTENSTGKWINVPKCENIQFDISMLKLNFPRYNLCPDSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG42</accession>
    <name>A0ABV2AG42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000581</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000099">
        <property type="protein sequence ID" value="MES1918641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15394" checksum="8EE3E31A170A22D2" modified="2025-10-08" version="1">MKNSVLSTYFKALLEAYKLYNKRKDKKDKKTNDEVARIVETASGLNNANKNIEQKGTLTDSAKERAKRIWSEKQQKRELESAKRKTMNKSFYELKRPVKRFKRKNNESRNKIIKQEKIDEKSFDELMKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG62</accession>
    <name>A0ABV2AG62_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000582</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the syntaxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000099">
        <property type="protein sequence ID" value="MES1918643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15959">
        <property type="entry name" value="SYNTAXIN-18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15959:SF0">
        <property type="entry name" value="SYNTAXIN-18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="277"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="295" mass="35381" checksum="2A8D0CCB20736CE2" modified="2025-10-08" version="1">MDKTDLFFYFVKIWRTKLHIKISRERRNEEETPFAKMAESLVFLIQNDFLSTKKEKSIRKYKNFLKENELEYCDDLRHFENRENKLTHENRLAIERDTFKFTKKVSDEIKQLKNHTDCVRAHSQKQHFQLIIFHLIDRLKQINDLMSEMQKKREKNFLNKKWGLESFKNIFGKIENFENGEKIGVFGRFENERKVEKMAKFGKEKSVELAEINQSRTKMANISKMLNMFASEIENQRNKIDTLNNSAEGSLWNYESANKSMRSTFLRRSGSNKFHKMIIFILAGICLLFLDWFSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG75</accession>
    <name>A0ABV2AG75_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000592</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000101">
        <property type="protein sequence ID" value="MES1918658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16978" checksum="DE840335345A30D5" modified="2025-10-08" version="1">MSCEEKVDKIAKILQVDKKLIPVDFINRKNEMNPVIHLSESGPYEFSKDGTIKGKMYTFSVCKILRNDEKGRTLISLTDDDTFNKYPNLVWMVPRCYSILDITDENKNETSRFILQGYRKYGGSRIDEDTGVDTSSINQVFILMSLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGE3</accession>
    <name>A0ABV2AGE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000661</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000117">
        <property type="protein sequence ID" value="MES1918746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="376" mass="44255" checksum="8A29C0C1B99DAEA2" modified="2025-10-08" version="1">MLDFKLRTPLFSYPVAVSYRQTISFSYYNQEKRYFICTQNGEFTPTEGICEDINLTLKLEENEKKETNLRHALQKLFVLCGELVLNYNSKQITINARIFKKLEKVVYFDEKTQTLIKIKNSYDRKVLENILTTKKIILVCDNNTVTWNYSNIFYNIIDKSNLPRVCRKNCPLSKSLFKTDFLENLETQKIFCKNGEMLFYDTENNHTEGVLDHNFKCKNKILRLVIEGIVVSTEAHYLRCVEKDNFINNCGSIFVYKNNQYTSKNIFLYCDNNIRIKLNCNENSFNKMNVFWRRKIDVICQKINKKDCSINLTEKRLVRMDGQSSVNFIPGNHLIGCKKAEENLILGDFLVDQMNVTCDNKKLSPSLIVCKRFYFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS8</accession>
    <name>A0ABV2AGS8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000593</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000102">
        <property type="protein sequence ID" value="MES1918659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051334">
        <property type="entry name" value="SRPK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634:SF9">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10826" checksum="5A3C43D34AE3B53C" modified="2025-10-08" version="1">MPYYEDSYYSESSQFDIEKENIGHYTIGGYHEVNIGDTYNDIYRIEKKLGWGHFSTVWLASNLSSFSYLQFLPINQIKLSIEDVKLSRKKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH49</accession>
    <name>A0ABV2AH49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">intramembrane prenyl-peptidase Rce1</fullName>
            <ecNumber evidence="10">3.4.26.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_005284</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>Hydrolyzes the peptide bond -P2-(S-farnesyl or geranylgeranyl)C-P1'-P2'-P3'-COOH where P1' and P2' are amino acids with aliphatic sidechains and P3' is any C-terminal residue.</text>
            <dbReference type="EC" id="3.4.26.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase U48 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.26.1" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000173">
        <property type="protein sequence ID" value="MES1918990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039731">
        <property type="entry name" value="Rce1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003675">
        <property type="entry name" value="Rce1/LyrA-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13046:SF0">
        <property type="entry name" value="CAAX PRENYL PROTEASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13046">
        <property type="entry name" value="PROTEASE U48 CAAX PRENYL PROTEASE RCE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02517">
        <property type="entry name" value="Rce1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="188"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="218"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="CAAX prenyl protease 2/Lysostaphin resistance protein A-like" evidence="12">
        <location>
            <begin position="151"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00049729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="32160" checksum="FC917C8B748F0A8F" modified="2025-10-08" version="1">MDYNLKTVALLLCTVYVALFISSIYIWDILGFENKDRNNKHVILRRSFSISFTSFLSLLALKRYLTISESNSFRKSPFLSMIGFSINRTALIDSLKIGFITTFFFFGHQTHSFIVLIEAKMRSKEEFRLALHENDFTSAFITKGRSLVNPIFIKSVLLAPIFEELIYRSVICTSLAIAKFSVLKTTTISSLLFCSSHLHLLFWHFFIEKKSLKQTLSILIVQWSYSFIFGLFESTTFLITRNIWACIVSHSICNFIGFPDFGWIFSENSPSKRRSFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC0</accession>
    <name>A0ABV2AHC0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ferrochelatase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000932</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the ferrochelatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000188">
        <property type="protein sequence ID" value="MES1919060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00419">
        <property type="entry name" value="Ferrochelatase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1400">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001015">
        <property type="entry name" value="Ferrochelatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033644">
        <property type="entry name" value="Ferrochelatase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11108">
        <property type="entry name" value="FERROCHELATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11108:SF1">
        <property type="entry name" value="FERROCHELATASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00762">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53800">
        <property type="entry name" value="Chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="135" mass="15505" checksum="1CDFF848BB667D25" modified="2025-10-08" version="1">MERLREKRFENKYVAAWQSKVGPVAWQGPQTESVLKSLGERGFGKVVIVPIAFTSDHIETLYEIDVEYRKVAEESGITEFRRSRSLNDSEMFCRGLAEMVEDHLREKKVASAAYGLRCADCWQGEKCRKLLNPAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG8</accession>
    <name>A0ABV2AHG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA repair protein rad50</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RAD50_1</name>
        <name evidence="2" type="ORF">MHBO_000994</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000206">
        <property type="protein sequence ID" value="MES1919130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18867:SF12">
        <property type="entry name" value="DNA REPAIR PROTEIN RAD50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18867">
        <property type="entry name" value="RAD50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="64"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="126"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="362" mass="42769" checksum="96A91B3C0B255C18" modified="2025-10-08" version="1">MSLSKLRKNESEYQNLVNEEKRFLNEIKTNKQNLKALKTKIGKMDIIDVEKSINEIQKEMRENSLNFKMKKDEKEEEIKKLEKEKTEFESVLKHLKLYSSLEIERKQIKRLFEKNKKKKSSLEQVLKTEEKSILEIRESLKEKEQKVKNFEQNAKFRETEKEYLKIVKERNDLKSKVERSFGENELFSKYEEAKKKIGDLKKMFFESDGRKSAFKDQAIEISNTIKNNESFEMIEDHFKDTLINLETNLVANKDLDLYQKALDNALIEFHSIKMKEINAILKKYWKLVYKGNDIDFIEIVSNCDENTVQRTSNRNYNYFVLMVCGDAKLEMKGRCSAGQKVLASLLIRLSLAGSFPKPKNFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL2</accession>
    <name>A0ABV2AHL2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">rhomboid protease</fullName>
            <ecNumber evidence="4">3.4.21.105</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ROM1</name>
        <name evidence="13" type="ORF">MHBO_001038</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Serine protease involved in intramembrane proteolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>Cleaves type-1 transmembrane domains using a catalytic dyad composed of serine and histidine that are contributed by different transmembrane domains.</text>
            <dbReference type="EC" id="3.4.21.105"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Membrane</location>
            <topology evidence="2 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the peptidase S54 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.105" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000217">
        <property type="protein sequence ID" value="MES1919174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002610">
        <property type="entry name" value="Peptidase_S54_rhomboid-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22936:SF69">
        <property type="entry name" value="RHOMBOID-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22936">
        <property type="entry name" value="RHOMBOID-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 11" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0720">Serine protease</keyword>
    <keyword evidence="6 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="37"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="112"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="174"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S54 rhomboid" evidence="12">
        <location>
            <begin position="103"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU362115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23213" checksum="ADBF3CB5BEC8417D" modified="2025-10-08" version="1" fragment="single">MANVHTVADIENSRNGNANARGLPSTYETVWPKISKIYFPFFNVLTFNFFIILIQILMFVVSIVVAKFVGSKIIFVVVDNDISINPDALVLLGASSLPKIQEGQVFRFITPAFLHANFSHIFFNVFFQLILGFFFEKDWGHWRIAFAFFVGAWGATAFSAVVEHSTRISVGSSGALFAYLGFALVFLVFNWSNLPDRLMRLINIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ0</accession>
    <name>A0ABV2AHZ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Cyclin-dependent kinase 2 homolog</fullName>
            <ecNumber evidence="2">2.7.11.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Cell division control protein 2 homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">cdc2-related kinase 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="primary">CDC2A</name>
        <name evidence="17" type="ORF">MHBO_000970</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.22"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.22"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">May form a complex composed of at least the catalytic subunit CRK2 and a cyclin.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.22" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000200">
        <property type="protein sequence ID" value="MES1919104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004693">
        <property type="term" value="F:cyclin-dependent protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050108">
        <property type="entry name" value="CDK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056">
        <property type="entry name" value="CELL DIVISION PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056:SF254">
        <property type="entry name" value="CYCLIN-DEPENDENT KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 14 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="17" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="17" id="KW-0132">Cell division</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 14 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 15" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4 17" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="16"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00039612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00041902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00042858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="MES1919104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="312" mass="35695" checksum="893A1492607B9E22" modified="2025-10-08" version="1">MSESEVESVFDGIDRYHKLDKLGEGTYGVVYLAKDRQTGNCVALKKIRLEVEEEGIPPTAIREISLLKELRHSCIVNLIEVIHENDKLYLVFEYLEQDLRKHMKSVKNKLDELVIRSYLYQLVSAIAWCHTRRILHRDLKPQNILIDRKGNLKLADFGLGRAFGLPMQTYTHEIVTLWYRPPEILLGAKKYSCAVDMWGVGCIFAEMVNMQPLFAGDSEIDQIFKIFQILGTPDEKTWDGFSSLPDYKPTFPVWPAKKLGKMVPGLSPSGVDLLKKMLHCDPSKRISAIRALEHDYFRDERKGGGCLLPLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI44</accession>
    <name>A0ABV2AI44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Small ribosomal subunit protein uS7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001185</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000259">
        <property type="protein sequence ID" value="MES1919335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.455.10">
        <property type="entry name" value="Ribosomal protein S7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023798">
        <property type="entry name" value="Ribosomal_uS7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036823">
        <property type="entry name" value="Ribosomal_uS7_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00177">
        <property type="entry name" value="Ribosomal_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47973">
        <property type="entry name" value="Ribosomal protein S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS7" evidence="4">
        <location>
            <begin position="168"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="32066" checksum="E69976EA21282BC8" modified="2025-10-08" version="1">MQKMAQTNLHKTNFRKIANNIFIKSLFVTPKRFCQNEIKENYRFRNRKMVGLTETKFFSKTSKIMQNRGDTVKFEKILLIAIKRLKHNLTILNIPRKPITTFNFYNASFEKKEKFFEFWEKMEHLSEEAKLTATLNYLALNFEAISDLDNNDQTLMANCESQYEKYRGQTAFELLDRMFAKITPQIGLAFKKKYTKGKVGHTLVPSPKPLTADQCDNSAVKLFEKGIKKRTEKTLVRKLTNELLDIETGKAASIEEKNKVHLTALKNRKNIYMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI55</accession>
    <name>A0ABV2AI55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rab-GAP TBC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001042</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000219">
        <property type="protein sequence ID" value="MES1919179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.1310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.80">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000195">
        <property type="entry name" value="Rab-GAP-TBC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035969">
        <property type="entry name" value="Rab-GAP_TBC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045913">
        <property type="entry name" value="TBC20/Gyp8-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20913:SF7">
        <property type="entry name" value="RE60063P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20913">
        <property type="entry name" value="TBC1 DOMAIN FAMILY MEMBER 20/GTPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00566">
        <property type="entry name" value="RabGAP-TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00164">
        <property type="entry name" value="TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47923">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50086">
        <property type="entry name" value="TBC_RABGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rab-GAP TBC" evidence="2">
        <location>
            <begin position="51"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30580" checksum="B6C3381D6F9B66CD" modified="2025-10-08" version="1">MIELIDFIKKIAFRRETKESEADISQRVFRIVSENSSETNSLKNLGEKWGFGSNEARISAWTRLLLKNESPRAPLNKDYFEQSSGNKNDFTVGVNQINLDVRRSFVIGDNFLFEDRKMREFARKDLGIVLQTIFEENKDISYTQGFHELVSIFFHVAGMEASYRISLVVIERYYKDFLYSSFEETKSVLRFCVEIIKMEDRMLFEHLHQNKINGFFSLSWLLTWFSYNKQEIEGILRIFDFIISTNFIMPYYISAAVFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE3</accession>
    <name>A0ABV2AIE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001128</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000243">
        <property type="protein sequence ID" value="MES1919269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="129"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19692" checksum="383941E21BC5F978" modified="2025-10-08" version="1">MNPTAEDDESEAAKETIAQNATKKPYKCKRPSYNLPWRCKSLIALNKGCSPCTRSLTSLKLENVGGYDGPITLLQQSVGGKMVPRNESGRHLEIEGKLGDGVIGEKVFLFKGECLGLLGHLRRDDLHRLRPSRGGGRRGRRLAGRRRREPLRWDRPQRLLSVREPRLRASRLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG8</accession>
    <name>A0ABV2AIG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribonuclease P protein subunit p30</fullName>
            <ecNumber evidence="4">3.1.26.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPP30</name>
        <name evidence="4" type="ORF">MHBO_001298</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic/archaeal RNase P protein component 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.5" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000300">
        <property type="protein sequence ID" value="MES1919471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002738">
        <property type="entry name" value="RNase_P_p30"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13031:SF0">
        <property type="entry name" value="RIBONUCLEASE P PROTEIN SUBUNIT P30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13031">
        <property type="entry name" value="RIBONUCLEASE P SUBUNIT P30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01876">
        <property type="entry name" value="RNase_P_p30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="PHP domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="261" mass="30286" checksum="78434C9951F6678F" modified="2025-10-08" version="1">MAGFCDFNLVWRIGKAAEMARHSKNLGYSVIAFDKEVDIQVFQQQKEAMSQLNFDGFDKIANSTEKMRVLKRITIKIEKMSDLSAARKIEQNLPKSQIDLVAIKTRNEKIFHSCCEEGFFDIICLDFAEKNPFLLKRKSLKIAHRRRIMFEVCYSDFIEDESKRLAFMQNFDLLGAMSSYRNLLLSSGTDDPMLLRGPYDLINFCSLFKMDLKSSRASVLENAHVVFERARSRESFLDSVASKEIEQLSDSEKLRKRPRFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ2</accession>
    <name>A0ABV2AIZ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">General transcription factor IIH subunit 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">TFB2</name>
        <name evidence="10" type="ORF">MHBO_001433</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the TFB2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000349">
        <property type="protein sequence ID" value="MES1919637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040662">
        <property type="entry name" value="Tfb2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004598">
        <property type="entry name" value="TFIIH_p52/Tfb2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13152:SF0">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13152">
        <property type="entry name" value="TFIIH, POLYPEPTIDE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03849">
        <property type="entry name" value="Tfb2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18307">
        <property type="entry name" value="Tfb2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 8" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Transcription factor Tfb2 C-terminal" evidence="9">
        <location>
            <begin position="277"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF18307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="333" mass="38449" checksum="746650461DEAF8F0" modified="2025-10-08" version="1">MGKSDKTKSKNEKNIFCAAKSILTNDGMLKTLKTIKTSNKQKTENKNWEKILSVIINKPTQFSNPKQKREIFAILEFLKILKNGQITEEGKRFLLQNSKTRKWKIIFGYLQRTRFDDNSLIDGLIFILSQNLPQNDQTVFPQNDLNSTQKEIARAFENFGFLESVSVDPSRFCYRPTFVLKNLFSANRKNGFLVVETNFKIYGYTENDVHSFELGLFARINKKLPGFVSASITRESVIDAIKSNLSADLVVDYLRSNSRQLPKSNFEDLVPSNIIAQIRLWGKQLNRCEFGEAVLFDNFVDDDEFSKLKEKLIKSNDDILLSDINRKWLLSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ65</accession>
    <name>A0ABV2AJ65_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001497</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000377">
        <property type="protein sequence ID" value="MES1919715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00180">
        <property type="entry name" value="PKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052751">
        <property type="entry name" value="Plant_MAPKKK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48011">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48011:SF18">
        <property type="entry name" value="MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23286" checksum="859755DE352E3090" modified="2025-10-08" version="1">MEFCETDMNKLSSEEDLSVDRIKKYFRMIIQGVEYLHSIGYVHYDLKLDNVLITENDTVRVADFGLSRKIGPPDINKNFEATLIIKPPELIEGGEVGFYFDSWALGCCLVRACSEDYAEYDTSYDKVLKSTTITILKYFVENADQKYVDAFNPILAHKLLVENFDKRLWGKSLPVAADDPELRDCFGLTQKRDEVKSFVLFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA9</accession>
    <name>A0ABV2AJA9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Chromatin-remodeling ATPase INO80</fullName>
            <ecNumber evidence="5">3.6.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">INO80_1</name>
        <name evidence="8" type="ORF">MHBO_001533</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Component of the INO80 chromatin-remodeling complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">The DBINO region is involved in binding to DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the SNF2/RAD54 helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000390">
        <property type="protein sequence ID" value="MES1919760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050520">
        <property type="entry name" value="INO80/SWR1_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685:SF2">
        <property type="entry name" value="CHROMATIN-REMODELING ATPASE INO80"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685">
        <property type="entry name" value="HELICASE SRCAP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="7">
        <location>
            <begin position="52"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU368001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="28156" checksum="3F513E248B1761C7" modified="2025-10-08" version="1">MDFKRTFGTNMSKIEKLSKDQLLTDCGKLTALDKLLKEFKILILKKNQNFTQIENFNRKRKNGHRVLIFSQMTKMLDILQDYCHIRRYKFLRLDGSTQITDRTIMVKQFQRDTSVFIFLLSTRAGGLGINLTAADTVIFYDNDWNPTMDAQAMDRVHRIGQKKQVTVYRIICSNTVEERVWKVAQQKFKIQKSVYSGGFKFAKEKRKKKSSKSPNNDDEEDSKIFKPNQLKKMILDDESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJL7</accession>
    <name>A0ABV2AJL7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">SMP-LTD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001587</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000413">
        <property type="protein sequence ID" value="MES1919827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031468">
        <property type="entry name" value="SMP_LBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045050">
        <property type="entry name" value="Synaptotagmin_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10774:SF190">
        <property type="entry name" value="C2 CALCIUM_LIPID-BINDING ENDONUCLEASE_EXONUCLEASE_PHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10774">
        <property type="entry name" value="EXTENDED SYNAPTOTAGMIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51847">
        <property type="entry name" value="SMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0445">Lipid transport</keyword>
    <keyword evidence="4" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="SMP-LTD" evidence="7">
        <location>
            <begin position="123"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="457" mass="53019" checksum="1D404C3317EB4AEE" modified="2025-10-08" version="1">MSQNSLRFQLEKLKNVFICRKLEIIVKIISKLLNNKTQMATLKIILFSIFVYFITAYSGFSTLLLLILLILLYDQFLAETDSKKKISQTNMIDYLSSCPKPPKNDIPKWLMFPEYEKARFINHIIYVLWNPHLKLSIEEKIRAKLDWKLEVQKNKYKKLSHLSVNVFDLGSSPPLVSGIKTCEVKCDMCSRHIVHDYSECDQKYCALQIEFVFVSEDMKFGLTAGYKNIKATVILSKIYLSGSVLLKLCDFVNLIPGFSRYTLSFLNYPKFDFALSFKTGSIKISYVPKLSKIIEPLLKKTIWTGLIYPRSKSFKIKSRKIEQMRAAGDLIKYGQLSTVTEGSLCVEIKEVVWDTPAPKEPDYAVPLMLERGSLYQDDLGYSWHCVVGVKGTRMVYKTEHIQSKYVTRRLKWTERFTFKNLTLSDPRNISVSPFLDIDVRVLGKSLKYFRIKPLFDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM8</accession>
    <name>A0ABV2AJM8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">acetate--CoA ligase</fullName>
            <ecNumber evidence="2">6.2.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001488</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000371">
        <property type="protein sequence ID" value="MES1919704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032387">
        <property type="entry name" value="ACAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24095">
        <property type="entry name" value="ACETYL-COENZYME A SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24095:SF14">
        <property type="entry name" value="ACETYL-COENZYME A SYNTHETASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16177">
        <property type="entry name" value="ACAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acetyl-coenzyme A synthetase N-terminal" evidence="4">
        <location>
            <begin position="2"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="3">
        <location>
            <begin position="38"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16128" checksum="FDB1424FBDE5D257" modified="2025-10-08" version="1">MLDWLKPFSKTSSGSFQNGDIRWFLNGKLNACLNCVDRHLPKKGSHTAIVWEGDDGETREISFLQLHQQVCKLTNCLRRFGVKKGDVVCIYMPMVPEAAFAMLACARIGAPHSVVFAGFSSSALGDRLKDCGCKVVITAEKVNVFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK01</accession>
    <name>A0ABV2AK01_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001732</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000472">
        <property type="protein sequence ID" value="MES1919999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26912" checksum="C49D8E6C0D2D0579" modified="2025-10-08" version="1" fragment="single">NPLKKGLMPAVADLISVEHANLQLDGSKKMFIRDKDDKLNLSHHNFLYNTVRNFVRVLVFSSFYSKKTNWDFMKNGELITKIFEILRNEISRGNTISDLVLNIVMLLTNGIQRSRKEIKKIFVKHLFENGVESVLRNLFIGTANPKFTPLFVAKTALLLLELKKVVENEQMEKILSVLEDQFEDYKSNCAEEVVQEINLKEFAEKMLMYLEVFRKNEKKKPKKFFSKLFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK22</accession>
    <name>A0ABV2AK22_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001756</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000483">
        <property type="protein sequence ID" value="MES1920027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="78"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="12671" checksum="906FDDE0520F427E" modified="2025-10-08" version="1">MSLKKSKAGKEDKNQNKKNERIGEDSSDDEMYLGEKIAIVRQKAEYSAAEEAMGKPTERIAPAGENKKDSISPGEFSYVAYGGIAILGVILFAVTIAFFLKKNKRKSLNNDYLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK82</accession>
    <name>A0ABV2AK82_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Programmed cell death protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PDCD2</name>
        <name evidence="2" type="ORF">MHBO_001810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000509">
        <property type="protein sequence ID" value="MES1920091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052815">
        <property type="entry name" value="PDCD2-like_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007320">
        <property type="entry name" value="PDCD2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46421">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46421:SF1">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04194">
        <property type="entry name" value="PDCD2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Programmed cell death protein 2 C-terminal" evidence="1">
        <location>
            <begin position="151"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="251" mass="28789" checksum="F9B9022C9A248106" modified="2025-10-08" version="1">MAELGVAKLPAKPNFANDHKTTKFGGSPKWPKVPPFPSLTKCEKCKSQKTLILQLYAPVENWHRQIFVVGCLKANCVNSKNGITAISYATSSLELEDGDLSNIDQSLTKPELKPIEIEAMEEPEEEKRETEIAEKIITSENTEEYEKPKMDQFVKFSLKMQLEPKQFFRYHFGTKPLLIKVENLPKFRCKNCGKELLFEFQLMPYVFRQVEKFQQDDNIDINLATVAFFACGNECVLDDFVELQSYAQKAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKU2</accession>
    <name>A0ABV2AKU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Triacylglycerol lipase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000583">
        <property type="protein sequence ID" value="MES1920278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021771">
        <property type="entry name" value="Triacylglycerol_lipase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11815">
        <property type="entry name" value="DUF3336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Triacylglycerol lipase N-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="11089" checksum="E1EB437E088C8009" modified="2025-10-08" version="1">MKKDSKLKKSLKSAKNYEEFVSIAKKMDSNRTRLEWIKDENSEFFNAKEINALLTELSTLKVCKRKIFKANQKPQRIDACFGTLFPKAQKRIRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW2</accession>
    <name>A0ABV2AKW2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal protein S11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001825</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000515">
        <property type="protein sequence ID" value="MES1920109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.80">
        <property type="entry name" value="Ribosomal protein S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036967">
        <property type="entry name" value="Ribosomal_uS11_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53137">
        <property type="entry name" value="Translational machinery components"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="157"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="167"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="181" mass="20413" checksum="34020F7AF7BD31BF" modified="2025-10-08" version="1">MFPAKQSAKLRKQSLHLIRALIRIRLHRTREEQIRNNLGSIKETLNEDKEKVNNTIILTYNFNASNLIATAANGAGKVYKTVSGGKFSPVMYKGNVGQTGATVNHEITKEILKLGRDAYERIQIRTKGFNTSRNSILTEIISHSILGPKIESLTDITNLPFNGPTPKKPKREKKRKFESKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL80</accession>
    <name>A0ABV2AL80_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">proline--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001910</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.15" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000554">
        <property type="protein sequence ID" value="MES1920219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00862">
        <property type="entry name" value="ProRS_anticodon_zinc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="entry name" value="Anticodon-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.30">
        <property type="entry name" value="C-terminal domain of ProRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004499">
        <property type="entry name" value="Pro-tRNA-ligase_IIa_arc-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016061">
        <property type="entry name" value="Pro-tRNA_ligase_II_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017449">
        <property type="entry name" value="Pro-tRNA_synth_II"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43382:SF2">
        <property type="entry name" value="BIFUNCTIONAL GLUTAMATE_PROLINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43382">
        <property type="entry name" value="PROLYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09180">
        <property type="entry name" value="ProRS-C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00946">
        <property type="entry name" value="ProRS-C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64586">
        <property type="entry name" value="C-terminal domain of ProRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="7">
        <location>
            <begin position="1"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="347" mass="40006" checksum="2B26C2DF6471518E" modified="2025-10-08" version="1" fragment="single">PFIRTREFLWQEGHSAFETKAQADDEVLDILDIYSRVYEDLLAVPVIKGRKTEVEKFPGADFTTTVETFIPETGRSIQGATSHALGQNFGKIFKIEFEDESRKKKIPFQNSWGLTTRSIGAMLMTHGDDKGAVLPPKVARHQVVIVPIFTKRLLDSPALFRQHYMDLLNVLRKENLRAIVDERRNYNPGWKYNHWELKGVPLRVEFGPKDLERRKCVLVRRDDNSKAEIDLHDAARKIGAALEEIQKNLYRKASEKMDRCKREALHWSTFENALKDKCFAEVPFCNEKDCEESVKERSHVESDEKSVPTGSAKSLCVPFAQKKLPRDIKCFACDRKAVNWTLFGRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA0</accession>
    <name>A0ABV2ALA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Prohibitin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002102</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the prohibitin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000669">
        <property type="protein sequence ID" value="MES1920434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03401">
        <property type="entry name" value="SPFH_prohibitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="entry name" value="Band 7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000163">
        <property type="entry name" value="Prohibitin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23222">
        <property type="entry name" value="PROHIBITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23222:SF0">
        <property type="entry name" value="PROHIBITIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00679">
        <property type="entry name" value="PROHIBITIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="Band 7/SPFH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="2" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="Band 7" evidence="3">
        <location>
            <begin position="30"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU366048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="30917" checksum="04798EBA4A01C2D8" modified="2025-10-08" version="1">MNANQFLKMAKGFPSVILGFGSAAFLAQNFIFDVKAGHRGIIYSRFSGILDKSYGEGTHFLIPFVQKAILFEVRTRPRTITSITGTKDLQQVNISLRILSHPRETKIPIIYRNLGKSFEERVLPSIGNEVLKSIVAQYNADELITMREKISKQINETLTVRAGQFNIVLDDISITHLSFSPEFSKAIEQKQIAEQDAERAKFMVIKSEHEKAAAVIKSEGESEAAKLISNALQKSGNGLIKLRKIETAKQVTENLAKAPNVSYLPSNANILLDPSKLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA3</accession>
    <name>A0ABV2ALA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000677">
        <property type="protein sequence ID" value="MES1920451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9961" checksum="19E938B4CF4FEFA4" modified="2025-10-08" version="1">MRKWSMNEEDEFIEDKHEKYLEIKTEIDKAKQQKMEKINDVLIGVFGFKHKNNKKQVLESLFCYLSFSKKLVCPNRRWWAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM7</accession>
    <name>A0ABV2ALM7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Preprotein translocase subunit SecY</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002235</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SecY/SEC61-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000747">
        <property type="protein sequence ID" value="MES1920578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3370.10">
        <property type="entry name" value="SecY subunit domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002208">
        <property type="entry name" value="SecY/SEC61-alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023201">
        <property type="entry name" value="SecY_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10906">
        <property type="entry name" value="SECY/SEC61-ALPHA FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00344">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103491">
        <property type="entry name" value="Preprotein translocase SecY subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047143580" description="Preprotein translocase subunit SecY" evidence="3">
        <location>
            <begin position="27"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="64"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="108" mass="12041" checksum="10A299C44140F5A1" modified="2025-10-08" version="1">MHFLLHVFLIALLCGVFSMLWMEASGSSPKSQARMLDSQGIQFYKKSRKETLPTIEKNVFPSTILGGVAVGILTVLSQITGALMSGTGIFMTVNLIFSYYQLYRKEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALP1</accession>
    <name>A0ABV2ALP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002232</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000743">
        <property type="protein sequence ID" value="MES1920575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="27984" checksum="CC2DC411B41FD0DC" modified="2025-10-08" version="1">MSFFFKKVKNLILKRKSSHFIKPKFCGFSTHSILLNDKALNKLIQSTMSKNIDTIDVYRSLLENYGAVNSSIQISKKFSFFSKVGKLGEKFSMRPIKILENSPMSVLLENKQNRKTNRFAIHFHSIGFVAGSPLDVYKPISHLFEDLNCDKILCVGLNSIEHAKLSDIFETALNAYNYVVRKFEADKSKLIISGSASGCLLTTKILNYLNSKQEKTGEKHPQLHYRMAPIFIRKPSKFYCGAIISL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR3</accession>
    <name>A0ABV2ALR3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SOCS box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000771">
        <property type="protein sequence ID" value="MES1920621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="57"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="135" mass="16022" checksum="1FC4FCCC72428C20" modified="2025-10-08" version="1">MIKDDVFSSCFYPSVRYICRILTTNHPEKLQLIVNHTNDPLFLMFLLDVNYFNNFLCSLNNETIAKLRNQIEEIIEQSRSKEIKFYQFRKIKSVLSHHKMSPLVRKLVAKYKDNPATIKIESVLPSFLIKKHKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS1</accession>
    <name>A0ABV2ALS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methionine aminopeptidase 1D, mitochondrial</fullName>
            <ecNumber evidence="2">3.4.11.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">METAP1D_1</name>
        <name evidence="2" type="ORF">MHBO_002268</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000768">
        <property type="protein sequence ID" value="MES1920616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004239">
        <property type="term" value="F:initiator methionyl aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="entry name" value="Creatinase/methionine aminopeptidase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43330">
        <property type="entry name" value="METHIONINE AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43330:SF8">
        <property type="entry name" value="METHIONINE AMINOPEPTIDASE 1D, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="Creatinase/aminopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M24" evidence="1">
        <location>
            <begin position="56"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="23698" checksum="868DAE076738F4B2" modified="2025-10-08" version="1">MSKFSRKFASTGKILKTRRMIPPRIEKPSYYLNGLVENQIDTIPKYKEALAIRSNNMREAAILAKTMRFLAKFLAKEGTTTEELDYKIHLDCIENGFYPAALHYKNFPKSISTSVNEIACHGIPDDRKLNVLKFIEKNGDILKVDCMSYRNGHFGDCCGSFVIGEGGKDREEKENLVDVARKCVRKAIDVCGPGVPFSQVGNVISFLDFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV8</accession>
    <name>A0ABV2ALV8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">beta-ketoacyl-[acyl-carrier-protein] synthase I</fullName>
            <ecNumber evidence="2">2.3.1.41</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002266</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.41" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000768">
        <property type="protein sequence ID" value="MES1920615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712:SF336">
        <property type="entry name" value="3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="POLYKETIDE SYNTHASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52004">
        <property type="entry name" value="KS3_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Ketosynthase family 3 (KS3)" evidence="5">
        <location>
            <begin position="1"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS52004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="27266" checksum="1D4C74F94D6993E7" modified="2025-10-08" version="1">MICGGAEKTNGVSLIHSGFKSCLALSKRFDEMEKSSRPFDVKRDGFVLSEGSGVLVLEELEFARKRGAKIYGEILGSGMSNDSFDITKPSGIGALSAMQNAFNSVRNSKFSKNDINFIVAHGTSTVIGDKAETEALVDFFGEKSKEKMTFSTKGALGHTIGASGAIDLIIGVKALKEKKIPATKNLEKEIDLKIDFVKKESRKIATKCFLANSFGFGGYNSSIIVGNQFFHLQSKNFRFLTKQNHLRHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW4</accession>
    <name>A0ABV2ALW4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">116kDa U5 small nuclear ribonucleoprotein component N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002259</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000759">
        <property type="protein sequence ID" value="MES1920607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031950">
        <property type="entry name" value="EFTUD2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16004">
        <property type="entry name" value="EFTUD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="116kDa U5 small nuclear ribonucleoprotein component N-terminal" evidence="2">
        <location>
            <begin position="6"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23406" checksum="8435028ACAA5680A" modified="2025-10-08" version="1" fragment="single">MSDAENMYDEFGNYIGPELDSYSSEYSDEEEKQRFQFKKKDDKPDEPFAPPEGPNDNLKQVERPETPTVADAAADENEKTALQKMVKNTSSQIVLHEDKQYFPNASVVYPDAEVITQLEDTQPIETPIIAPAKTRVFYNVEKALPETSFSYRFMTKMMENPLLIRNMSFLGQLHHGKTLFVDMLVRETHLQNWPIDKEIRYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX8</accession>
    <name>A0ABV2ALX8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA polymerase epsilon subunit 3</fullName>
            <ecNumber evidence="4">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">POLE3</name>
        <name evidence="4" type="ORF">MHBO_002331</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000806">
        <property type="protein sequence ID" value="MES1920685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd22928">
        <property type="entry name" value="HFD_POLE3_DPB4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003958">
        <property type="entry name" value="CBFA_NFYB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051377">
        <property type="entry name" value="DNA_Pol-Epsilon_Subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46172">
        <property type="entry name" value="DNA POLYMERASE EPSILON SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46172:SF1">
        <property type="entry name" value="DNA POLYMERASE EPSILON SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00808">
        <property type="entry name" value="CBFD_NFYB_HMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Transcription factor CBF/NF-Y/archaeal histone" evidence="3">
        <location>
            <begin position="11"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="79" mass="8934" checksum="A1C63D0B40F9652D" modified="2025-10-08" version="1">MTAKSEKPLDLPTSIITRHIKKDSNKLLSKKARESITRASTIWILYISHMANANAKADKRVTVLEKDVLKVLENNGFIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG7</accession>
    <name>A0ABV2AMG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002464</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000898">
        <property type="protein sequence ID" value="MES1920838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22388" checksum="FCC3B3E06FE43D5E" modified="2025-10-08" version="1">MSLKNCKEVRLYNKINEWIIFGLLMSLKELANQEVYEMFKSAFANSTYQIIGYGIKVKTADIYAKMADYANALKISHFKSSLKEEIARPITLNRLIAKMTLIVDNINKMTNFLNEAPFNHARYFEITLTALETLGIEIKILAANIDAENMKDALNSLAAKKLFKAIHCLYVLAKSAKKYSKCFFSFDYFCHFGKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH1</accession>
    <name>A0ABV2AMH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002352</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000817">
        <property type="protein sequence ID" value="MES1920709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="55"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="378" mass="44572" checksum="FE765FDE1BCBAC2C" modified="2025-10-08" version="1">MEHKANHLEKAQQFIWKIRKKRLKLEMEGKSVRTQLEYWTKRKQKLDLEKTPNIIRNLEKAVQKNEIENNLLEKNYQGEKSKANEFKKRFLQQTDGQLNSINDPQTKSNIALKLKNKIERLEWRDEIFEKMLDEQHNELEALKNNEDVMKMHLGALFEAVCFQKAFIESVVAFGRENNKIIGDENNKNKKIVRREKVFERLGSKENGLKNSQEFQKRYRNDLKTAFENAKDIARIYRFAELGRKGCFIGIKGGFNKSGIFTPKKFAKGLLISCKKGKTKNIKMYQNAGEKETLKKGQQKKNFRFVKKRLSLEDYNWRKKSLTFENLKVDLDGVNFNTPINKKRSFMPLRSNKLYNAARNLETPLRSNKNISKKKIGEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT0</accession>
    <name>A0ABV2AMT0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002577</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000990">
        <property type="protein sequence ID" value="MES1920974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8600" checksum="2AA742F788F7FB54" modified="2025-10-08" version="1">MMEYMISKGFKRVESLPVNTFVEPTAAQTQRSLFSPLPAEFDPRYRQELYAMGHGVRPFEYLGFFQVLRFPFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV1</accession>
    <name>A0ABV2AMV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000904">
        <property type="protein sequence ID" value="MES1920844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="178"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="64"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="212"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="223"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="27180" checksum="C14124F5C4DBB413" modified="2025-10-08" version="1">MVAERKRKRMRVLHGISAEDPAGDKIVKMGQPDDSENQKAESQVHETPPPPPNYDKSPSVLRPDSFEPKSSRMSEVLRPRMSASVDQEQKAAAAARYKLQQNFDPYNFSLADAKGAIETPPPPPPPVENKHVMIKMDYPHHYLMPDLNLQEFVGNLNKKVDSLNFVLEEVQKRVGKLERAMSGSGAEEEQKDPQTESQQDFGEDGERPTEVAEQQEAAEQSSAEERSAEAESRTLDKANENGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANA6</accession>
    <name>A0ABV2ANA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002708</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001099">
        <property type="protein sequence ID" value="MES1921125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="17"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="15305" checksum="48B4ECAC245B83D7" modified="2025-10-08" version="1">MRNATKEDRKYEYRAFMRRSHHRDRDRALWRRNSRERQRIISRWNRDLKDKERRKARKLKREKEKQQRKEKEKAQKESEKSQKESEKSQKDEKDEKDEKGETVSRDDDEKNGVEKANEATQNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANB6</accession>
    <name>A0ABV2ANB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DENN domain-containing protein 5B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DENND5B</name>
        <name evidence="2" type="ORF">MHBO_002705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001098">
        <property type="protein sequence ID" value="MES1921123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11500">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001194">
        <property type="entry name" value="cDENN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043153">
        <property type="entry name" value="DENN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051696">
        <property type="entry name" value="DENN_Domain_GEFs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037516">
        <property type="entry name" value="Tripartite_DENN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005113">
        <property type="entry name" value="uDENN_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12296:SF21">
        <property type="entry name" value="DENN DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12296">
        <property type="entry name" value="DENN DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02141">
        <property type="entry name" value="DENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03456">
        <property type="entry name" value="uDENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00799">
        <property type="entry name" value="DENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50211">
        <property type="entry name" value="DENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDENN" evidence="1">
        <location>
            <begin position="51"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="467" mass="54369" checksum="83DA00326F62B0BD" modified="2025-10-08" version="1">MEEGDYTVNWYRCEAFEKDEDTKLKMKIYRRPSQILKTDAKKTFYKIAEYFLVCDLEPHIKKDQFSKNVPRLCYRYPPSDRRELPLDSLNEINLFTFPSYFHFRESWIPPIVFHSTVTLNEQRIYGSTLIFYKKILSKTESKMLYEPISLTFLSKTAFLDQFSAILKYLYLSHFHSGFEKTVDLKSPAKNMAKFIRLLCGSIPPPSTFRTISLKLEPSKQESLSKKGSPKNRRKTITVYSKTKIDSNINRVRKGKRRETINHPILVPGEGVSFKETRSSVIEPLEKLGRLKLGEMAPNYLDATKTNLIRMQKPNKKLHRSCSASVVENTIARKMEYSKAAADIFENDVPITLSNSRFLSNESFNVEVSLHKDYRFFSLPLLSVNLYQNLLNIFDVHTIVKVVACLMCEISTVFFSSQFSLLTKIQECFKALLFPFIWSHIYIPNLPRELLHIVDAPVPVYFYDCSTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT3</accession>
    <name>A0ABV2ANT3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002743</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001126">
        <property type="protein sequence ID" value="MES1921174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18791">
        <property type="entry name" value="SF2_C_RHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1080">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007502">
        <property type="entry name" value="Helicase-assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF136">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX35-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21010">
        <property type="entry name" value="HA2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00847">
        <property type="entry name" value="HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="25535" checksum="17698F8823503800" modified="2025-10-08" version="1">MSEEANLGSKNKKPLIVLPLYSSLSSKQQLKCFQKSAMNTRKVIVCTNMAETSVTIPGIVYVIDALYAKINIFDPDLSLNCLTSVPISKASAEQRKGRAGRMSPGKCFRLCTENDFALLQKENVPEIQRTKMTEPILQLKALGIDNIANFEFFSPPPSKIVIESINQLYELGIIDDQNNLTKIGEICTEMPLDPRTSKSIIWASKNGCSEELISIAAMLSVKDVFLRPFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APA0</accession>
    <name>A0ABV2APA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein Mpv17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003032</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the peroxisomal membrane protein PXMP2/4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001426">
        <property type="protein sequence ID" value="MES1921505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007248">
        <property type="entry name" value="Mpv17_PMP22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11266:SF80">
        <property type="entry name" value="PEROXISOMAL MEMBRANE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11266">
        <property type="entry name" value="PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04117">
        <property type="entry name" value="Mpv17_PMP22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="65"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="195" mass="22868" checksum="F1F7FBE6C1001868" modified="2025-10-08" version="1">MVIKLITRILIKWSKDCLIKKGRFIRNQFDKYPIRTNLVFGGSLYILGDYISQKIENNGIDQRRIMSMAFYGFCITGPLTGWWFPFLHKISLNKFPRHQTKKLLWQIAVDQLFMDPLSLFMFLVLINRLEGRSFSLKETGRKFILTSAVDFLVMPIFQFFNFKYCPVPLQAPVASMMTLTWVVFISFIAHSNKFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APA1</accession>
    <name>A0ABV2APA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003024</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001418">
        <property type="protein sequence ID" value="MES1921496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045059919" evidence="2">
        <location>
            <begin position="20"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="13674" checksum="FC963F0949FC793C" modified="2025-10-08" version="1">MFNLILLMCTLIMPHCVPPSRKDIKIDGTVPEQIKENESIYVGLICVKFFEFSPFGHLFKLTCIKNVLVLNNTRNLSVNDIYCGNRGDLVISFAGLIISVILISACFFCVNSDLRHKIHLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ7</accession>
    <name>A0ABV2APJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001533">
        <property type="protein sequence ID" value="MES1921600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16517" checksum="4CBE75AEA1056289" modified="2025-10-08" version="1">MRKLEKMTKESVNPYEFATSEVICFLVDTLLAFSNEKVSDLTRKMITYIDQNTKFRTDSILDAIYNKLPEHLINLNHAHSVFEMLRCLIRSQHNINSYKFYLLSCCYIHLSVFYVLNLLFICIYLGDFCSIHLHTVTYTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM9</accession>
    <name>A0ABV2APM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcription initiation factor TFIID subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">TAF1_2</name>
        <name evidence="4" type="ORF">MHBO_003158</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001569">
        <property type="protein sequence ID" value="MES1921631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04369">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040240">
        <property type="entry name" value="TAF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900:SF0">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bromo" evidence="3">
        <location>
            <begin position="55"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="33662" checksum="09DF4D9E748C9342" modified="2025-10-08" version="1">MVIFVNLELITKQIWELRPKKQTEEYKLICKKYRKTRLNKNQTIALKNFLTNAVPAMKYSEIFQNRVDLKSYPDYENIVAHHISLSDIISNITLHKYDSIQGIFSDIQQIAKNSILYNGIDFYVTENALKLSSFIFDNLVNFILKGKSLCDIFRSEKVENDGLLKKTLLHLGYMKSIVSIDRKNTENKYLNIIDTIKSIFYDRREMEETFKEIKQKILKREYFNLNELKNETIKEMMKNGSNFKIDRAIKKFDNLVLEEILKKIDKDCLIGVSENQRTLRNRFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU9</accession>
    <name>A0ABV2APU9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003097</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001487">
        <property type="protein sequence ID" value="MES1921564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052431">
        <property type="entry name" value="SKI2_subfamily_helicases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059032">
        <property type="entry name" value="WHD_DDX60"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44533">
        <property type="entry name" value="DEAD/H RNA HELICASE, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44533:SF4">
        <property type="entry name" value="DEAD_H RNA HELICASE, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26076">
        <property type="entry name" value="WHD_DDX60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="1"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="443" mass="50405" checksum="CF3E621A0CFAC3E6" modified="2025-10-08" version="1">MVDNDDVEYWLRRALRKNNWSKNHPFLRCINRGIAVHHNGMSRAYKTLVEVLFRAKHIKVVLTVGTLALGVNMPCRTAVFAGDSSELTPLRYRQMMGRAGRRGYDNIGKVIFFGIPPQKISYLMTSSLLSLHGHETISVTSFLRNLFCVASATDKTFRLKALRNTMKRTFGDDLDNSAQKPLVSKQTKLLYRYSMEYLLINGLINKNLIPVHFSGLVTKLYSTEPANFVFSMLLQQGVFDSICNPLPVSLKDENELKEQLKSSNKTKEERQNENLICIKILEILAHLFFRVPLPGDFRKPPYFNSAIVLKPLPENAKKVVAKFNLTSIALFEQFLQLSYLLNDKSSKTGDFLPVSKTRFCATDQLTTEEMNVDRTEDMARNGFAAIACRKGRFESGQEIGFSGEVHDIEFRKTDSIPVIELKDIHGKDLLLSAYVLVFKIEPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV1</accession>
    <name>A0ABV2APV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">DExD/H-box ATP-dependent RNA helicase dhh1</fullName>
            <ecNumber evidence="8">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">DHH1</name>
        <name evidence="8" type="ORF">MHBO_003236</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010001652">
        <property type="protein sequence ID" value="MES1921706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47960">
        <property type="entry name" value="DEAD-BOX ATP-DEPENDENT RNA HELICASE 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="7">
        <location>
            <begin position="33"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="64"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="33"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15335" checksum="FE1CC3D79C0C7CCC" modified="2025-10-08" version="1">MALDGIYVFDEKEKKYKKDLRPNTNDVTKTQKMKFVQFGLKRNLLKGIYSAEYLFPSPIQQEAIPAILSKQNILARAKNGTGKTAAYAIPAIHLVDPHNSAPQVLVIVPSRELALQTSSVFEKLANFCQINVKIFAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ50</accession>
    <name>A0ABV2AQ50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003341</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001797">
        <property type="protein sequence ID" value="MES1921807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12500" checksum="B8611A1BC8B6B0B8" modified="2025-10-08" version="1" fragment="single">MMSMEINEFMEKDCDKVSVRKPFSLNKSKTHIEYSERDKVTAEKIVEVCKSLPFIFQLGDETYCHELKCYTRKTNMNLCNVSFQKRLKDIVGSDQIRTMKQMLVMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ51</accession>
    <name>A0ABV2AQ51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nucleic-acid-binding protein from transposon X-element</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003347</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001804">
        <property type="protein sequence ID" value="MES1921812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="220"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="252"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="263"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="335" mass="38429" checksum="05C6AD6E4A0F24A7" modified="2025-10-08" version="1">MAMKRYFGEIAGCRKLPSKDVLISFKTEAEAQKARTIKNAQELFGVEAKVTKWHDAKRTFAIYGYPTSVSEEELTHYAKTELNIELKICNVLNPKSEKTTIFVEASEQCDFEALSKLKYFNLGYERCLIAKVRQKILRQCKKCFGFDHTAKNCTNESSCRICTGAHNEKECPEKIAKCKNCSGKHASDSKICPSFIAYRKRKLHASNKNRFSSLFIEENEREKKLQKDGTPFPYGYPLKQKRKKSKIHVPTVENSAGANSQGDNKHSNEEHEQARKNLLKSKQSENNFEKLMEMLYEQNKNILNMMSMMMTTLTTLVNSLNQKNASQNNRIPSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ74</accession>
    <name>A0ABV2AQ74_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CCR4-Not complex component Not1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003096</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001486">
        <property type="protein sequence ID" value="MES1921563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007196">
        <property type="entry name" value="CCR4-Not_Not1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040398">
        <property type="entry name" value="Not1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13162">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13162:SF8">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04054">
        <property type="entry name" value="Not1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCR4-Not complex component Not1 C-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="117"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="305" mass="33628" checksum="B10C1ED41B55537D" modified="2025-10-08" version="1">MLSQNFPSFLSEFNFDLATALPPKCFQLRNVVLSAVPVGTNPILYRYNDPNSLLEPGPPAAPRWETVVTRFKGLKTALDQYLSLVATSAAAANAFLPEAYFEDLDLILCDRAKKTARGGDRDVKPNRSAAAKGRSGSRKEYNRRAICTLAAYFGDKGMSAMRRAMSSANAPTTNALDRIFLFFGHLLAAMEPQGRYLLVAALLNQLRYHSSHTHVFSLVVLQLYGNAPDCESREIIVRAMLERLAPNGPHPAGLVSVFVELVRNPFYNLNAHCFGGSNPSALYIFKSLVARFVPELSNEREIAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ86</accession>
    <name>A0ABV2AQ86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001840">
        <property type="protein sequence ID" value="MES1921838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29717" checksum="B5D17EE567230B1D" modified="2025-10-08" version="1">MQYDIYIALSICTIVSYWLPAIILSFLHFKEKRSDYKFHLVQPIINKDEYLYRKYWVVENFAGPFPRVSLDGKSCYLRKIKDRTKADNEISAYKRIQKNKPANFPSVEMIKRTGANTELFLSGIPEAKFLSDFETLKRSSAVHVTAQYITMIDQLSQISVHPKISSSKELLLTKNNHQLFIADLTNVETTTEEPDFSFVFGLLEFYLSSFLSENESKENDLTKIKNLSVFNGINWLEYYLGKAQTDFKLETIIYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ92</accession>
    <name>A0ABV2AQ92_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein transport protein SEC23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SEC23A_1</name>
        <name evidence="3" type="ORF">MHBO_003387</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasmic vesicle</location>
            <location evidence="1">COPII-coated vesicle membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the SEC23/SEC24 family. SEC23 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001857">
        <property type="protein sequence ID" value="MES1921852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.730">
        <property type="entry name" value="Sec23/Sec24 helical domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037364">
        <property type="entry name" value="Sec23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006900">
        <property type="entry name" value="Sec23/24_helical_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036175">
        <property type="entry name" value="Sec23/24_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141:SF0">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04815">
        <property type="entry name" value="Sec23_helical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81811">
        <property type="entry name" value="Helical domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="1" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="1" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Sec23/Sec24 helical" evidence="2">
        <location>
            <begin position="15"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16284" checksum="7536A28AF130C7A7" modified="2025-10-08" version="1">MQTRDGFMNIKTSFDQGAACVLMARWAVYKAENEFAPDIFRWLDSTLIKLIKTFSSYEKNHPETFRLSSEFSFYPQFMFYLRRSPFMSIFNSSPDETAYYRIILNRENLLNSITMIQPPLFSYNMGFPNFVKFKNPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ99</accession>
    <name>A0ABV2AQ99_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001671">
        <property type="protein sequence ID" value="MES1921714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20092" checksum="3A1B88731B3148D8" modified="2025-10-08" version="1" fragment="single">MIPQLNVRQKMSVFSVFACCQYFKKFEGEQLEIMKHIINPILNDPRFFVNINKKLSENISTLINCEITSQNKSSDDFKIEFFKMLEKCIGIIEGILNLKQKIVNCALLAQKSTNTTLSINGSIIIGKLIATHNANENLVLDLFKNLLKYSDPKDIDKIQSVFTYILKVPGKIDIMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD9</accession>
    <name>A0ABV2AQD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001485">
        <property type="protein sequence ID" value="MES1921562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="18638" checksum="7DECB49D86D04A72" modified="2025-10-08" version="1">MENTEEILENKVEYEEKNDSLNRISQNEPDFEKKQENKNLLTLMLAKELEKRNLEPKKLSPKTEKILPKTENNGNLDAFLNESAAKSHKNIKFKTFKFECDKRAKNRKSFYKPKLKIAKTKNIKILTVSKPFKFLTEIRARKRVKDKMTFKRMWKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH6</accession>
    <name>A0ABV2AQH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-dependent zinc metalloprotease FTSH 1, chloroplastic</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">FTSH1</name>
        <name evidence="2" type="ORF">MHBO_003456</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001953">
        <property type="protein sequence ID" value="MES1921928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076:SF97">
        <property type="entry name" value="ATP-DEPENDENT ZINC METALLOPROTEASE YME1L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076">
        <property type="entry name" value="METALLOPROTEASE M41 FTSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="1">
        <location>
            <begin position="177"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="32287" checksum="2D7E7D54D3479DE3" modified="2025-10-08" version="1" fragment="single">YKPDFSFKMFLRSNRSVKFPKNTLTVFRFTTKIDKSFSMKKSFKRAENRNFIKRIKKYQKETQILLNDLRAKTKSPLKNHIFNMIARIATSLAIIFFLGKFIRNLQERNLTDSEKNSNYEEIPPKIDDAISDEQYCKDGKKVDFSSVCGNQEAKEQLMDIVEFLKNPEKFQKVKAKVPKGVLLSGPPGCGKTLMARAMSGEANVTFLSTTGSAFDELFKGSGAARVRNLFKNARKKAPCIIFIDELDSVGESRKSFGNVSRMTLNQLLSEIDGFNENDNIIVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK4</accession>
    <name>A0ABV2AQK4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Suppressor of white apricot N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003227</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001644">
        <property type="protein sequence ID" value="MES1921698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019147">
        <property type="entry name" value="SWAP_N_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09750">
        <property type="entry name" value="DRY_EERY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01141">
        <property type="entry name" value="DRY_EERY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Suppressor of white apricot N-terminal" evidence="2">
        <location>
            <begin position="41"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="153"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="367"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="155"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="173"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="382"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="391" mass="45762" checksum="2B5AA6D45D25F549" modified="2025-10-08" version="1" fragment="single">MSYYNSCKNHEKELRRKSKICHKLSEKQREIDIKSLGDPLQILRLNGQSCSIEQNPPKFRKQEKKEDFVEWNGLKIDKYDCRALLDFVPRTKTDFIKKSKIEKEINCLLNFERYRSLLLHIESGKKDGKLMEKIRHVLAARNVKMHNFIDEKSDCSGSSCSSNEDEASSNVKSNKKRRKTEKRAKNYGILGFSKIQKFDSILEHNRKAINKQKKWAKLARDNRAKDIKSLPHRKRKRILREKSRIKKEKLIENDFDDKNEYSSSTDYIFSYEESDFSNSPKPSDENAESVQSLLKTIDKLSGDRSSTKNGKNEIDQIDFDFCKPRNATMQKFFPELTPVDSVEEAMNWTNADFTRRRGIRRIEEQYDEEYSSSDNVSEKKLAPKRKLGSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL4</accession>
    <name>A0ABV2AQL4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">subtilisin</fullName>
            <ecNumber evidence="2">3.4.21.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PCSK7</name>
        <name evidence="3" type="ORF">MHBO_003292</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.</text>
            <dbReference type="EC" id="3.4.21.62"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.62" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001729">
        <property type="protein sequence ID" value="MES1921761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9541" checksum="481512E7E3D47070" modified="2025-10-08" version="1">MNVVPVWQDCINGTGITVGVVDGGIMWKDPDISHKKVSMNFRFENYVKIQDLNYWKQGPPGHTRVGASRSNHILLTDPIHRGPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ6</accession>
    <name>A0ABV2AQQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">E3 SUMO-protein ligase pli1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pli1_2</name>
        <name evidence="7" type="ORF">MHBO_003530</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002075">
        <property type="protein sequence ID" value="MES1922008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004181">
        <property type="entry name" value="Znf_MIZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782:SF4">
        <property type="entry name" value="TONALLI, ISOFORM E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782">
        <property type="entry name" value="ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02891">
        <property type="entry name" value="zf-MIZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51044">
        <property type="entry name" value="ZF_SP_RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SP-RING-type" evidence="6">
        <location>
            <begin position="46"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="167"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="229"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="5">
        <location>
            <begin position="187"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="206"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="391"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="409" mass="45892" checksum="C32186C87EBA82A6" modified="2025-10-08" version="1">MEILVERLRSLINTDKKKINVVGNANFWIGKAKKQKKNFQKSKKWTIDYFEKTMISKEHVSFVDPFSMARITDPVRGEKCAHLQIFDLKTFVERWYLANSKKMTKACWLCPICAQQTHPRKLYVDSFMQNLIENNPSKDEVLLDANAKVVEMAPDSAAKKDEVIEFGSSDDNEASSDEPSKNSSSRPPKPPSPPPAEMRSAFGKSAPSSAGIRSTRSSLQLNYGFRGGGLAAKDGNRPGSIRVFPASRSRLLVRPGGKMESPYRMPHFGPPRVDYKRFRPTAGEKSSKTERSQQAKRVPPPDHPPPPTSFFAVTRSKGGDKRRVPPDPPRPKKTVSGKVLRKTDSGAASKNSNLEEAPARFVIAFSEEEWTDNETKNSQLPSLSRENKKIGGNKKVKKKLKRKKPRVQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ9</accession>
    <name>A0ABV2AQZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003494</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002003">
        <property type="protein sequence ID" value="MES1921969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="26764" checksum="568D02D90252AAB9" modified="2025-10-08" version="1">MDHFKNNSLKLENNIDFRRNIDSKKRNFVHPPTRPKNAMNATRNFENQPNHYTFPQKRYLHQNQINHNDFIKKARPNLFLRSKPIPRINANFGQLQNRPHLKPPANPLTLYGVFKGYIFGQISDFGKVSVGTKVVLIKDINNKIDPLSIKVCPQQNFSGENVMGYCDVNTRDALTEILKNANFFKAEGIVCDFDEEIEDPPENQFAAQMKVYLIGPIFSIKKICSYLNQFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR08</accession>
    <name>A0ABV2AR08_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002218">
        <property type="protein sequence ID" value="MES1922105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="79" mass="9418" checksum="8FDE57018FDADF5F" modified="2025-10-08" version="1">MNLFKTFQNKEKWLHLLLKSFHEMYLRNMAHVLSDSPMEEQWHNAVINSLPPEDRYRKVSESPIQKSKSKSTKENVNVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR22</accession>
    <name>A0ABV2AR22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003642</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002256">
        <property type="protein sequence ID" value="MES1922127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16454">
        <property type="entry name" value="RING-H2_PA-TM-RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051834">
        <property type="entry name" value="RING_finger_E3_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931:SF3">
        <property type="entry name" value="RING ZINC FINGER-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931">
        <property type="entry name" value="SI:CH211-59O9.10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="67"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="195"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="248" mass="28464" checksum="0ADB151B7CA6128A" modified="2025-10-08" version="1">MNEPMRSIEPDVPRQQIDRETAARQAEMTTQYDPLFQKLYLICSSALVIFSIAIVIIRWTATCNMPLRYWLLVNAVTSLIYMNLNAFAFTNFAHRFVTIRVINAFRVFFILLWVFGQFYVFSASPKTCDAVLWGSCLALIILEYIRISFPVLLILTIFWWYPLLERFLENSQHPGATPEEISGLPIKKFGKEESCSICLSAASMDEEARVIPCGHLFHAKCLDSWLQVKSLCPLCRASVFKGNEKELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR64</accession>
    <name>A0ABV2AR64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003672</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002301">
        <property type="protein sequence ID" value="MES1922156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19716" checksum="36E52833791AE742" modified="2025-10-08" version="1" fragment="single">MKEKVVLSALAAFEEEKLASEKSSYFVKKTEEKTFRMLNFFGDKENRLLKSDLLIKIAKEELAENEKNDLTDFIDIFDQMNKDSFLSPPSEFSKKAFDLLSAIKQRNPEFKPYCDKIQESLNIRILAIFAKIYTRIPIQSLEQYLSQKFECFEHLIYERLNFTVDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA2</accession>
    <name>A0ABV2ARA2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003713</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002379">
        <property type="protein sequence ID" value="MES1922201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9226" checksum="F276C56882D27E49" modified="2025-10-08" version="1" fragment="single">MKTIIENNSNESSDELKKIKEEISSLNTDSSEKIDSNTAESINISNINVKKFEENTTGTDEASFILELILNYASNPEKNGKIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN0</accession>
    <name>A0ABV2ARN0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FH2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003833</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002589">
        <property type="protein sequence ID" value="MES1922325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2220">
        <property type="entry name" value="Formin, FH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015425">
        <property type="entry name" value="FH2_Formin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042201">
        <property type="entry name" value="FH2_Formin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45920">
        <property type="entry name" value="FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45920:SF7">
        <property type="entry name" value="FORMIN-G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02181">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101447">
        <property type="entry name" value="Formin homology 2 domain (FH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51444">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FH2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="22707" checksum="D42A859C3A1339C6" modified="2025-10-08" version="1" fragment="single">KKRVKPRKRMKPLFWNKIVLSKEELDKKEVIWAKMEEVKINKKAFENLFCIKKKNARGKNKKSKTKKDKEDDTSGIKCVLGGKKSNAVGIMLSSLPDLSVLPDILLEMDDLMLNETQINGMLNNLPTKEEIKKITEADKPGTNWDKPEKYFLLLIKIPNYEFRLKTWIFELRFDNNVNYIQTQFDKQINGCKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW9</accession>
    <name>A0ABV2ARW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">tRNA (Cytosine-5-)-methyltransferase ncl1</fullName>
            <ecNumber evidence="7">2.1.1.202</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">NCL1</name>
        <name evidence="7" type="ORF">MHBO_003738</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.202" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010002431">
        <property type="protein sequence ID" value="MES1922229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049560">
        <property type="entry name" value="MeTrfase_RsmB-F_NOP2_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001678">
        <property type="entry name" value="MeTrfase_RsmB-F_NOP2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22808">
        <property type="entry name" value="NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22808:SF1">
        <property type="entry name" value="RNA CYTOSINE-C(5)-METHYLTRANSFERASE NSUN2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01189">
        <property type="entry name" value="Methyltr_RsmB-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51686">
        <property type="entry name" value="SAM_MT_RSMB_NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM-dependent MTase RsmB/NOP-type" evidence="6">
        <location>
            <begin position="70"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="167"/>
            <end position="173"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="26052" checksum="267170A440AAD5DC" modified="2025-10-08" version="1" fragment="single">MAHLLDKSSADKRKLGMKKLIREEEFNAKYYKKLDSFIRYYRKQGVLYSEEDAAALKKCLKTELPVCFWFSGKSNGNNKLIESFSALNQNIRDKFQPLKWYSLETFLPGFKTNISKREMKKIDENSRMHKWLTEESDFGNIVRQEEVSMIPPITLDIEPSHKVLDMCAAPGSKTCQIVEKMKKISNVFDQNGFVVAVDSNFSRCHVLAKRVKELGLPNVTVINTKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS24</accession>
    <name>A0ABV2AS24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003986</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002895">
        <property type="protein sequence ID" value="MES1922468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.110.10">
        <property type="entry name" value="Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003409">
        <property type="entry name" value="MORN"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23084:SF263">
        <property type="entry name" value="MORN REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23084">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02493">
        <property type="entry name" value="MORN"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SMART" id="SM00698">
        <property type="entry name" value="MORN"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82185">
        <property type="entry name" value="Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="13"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="13"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="27164" checksum="185FF6945C5FD752" modified="2025-10-08" version="1" fragment="single">TKEYKYIGSFEKGEKSGFGKEKRENERYEGAWKNDKRHGNGILSHQDGSLYDGEWRDGDKNGFGKFSDWEGNLYVGDWANGLEHGKGEYKGPDGESYKGDFEDGRKEGYGVYVDKEGWEYKGDWKSGRKSGKGVLVIKDSSYDGEWRDDCRNGYGVYTFSNESRYEGEWANNLAEGKGKYVFGDGACYEGLFSRGWPKGNGVFRFPENGMEVKREWDEHLPTGYRVEIPWQKTMHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS30</accession>
    <name>A0ABV2AS30_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NADH:ubiquinone reductase (non-electrogenic)</fullName>
            <ecNumber evidence="2">1.6.5.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003991</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a quinone + NADH + H(+) = a quinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:46160"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>a ubiquinone + NADH + H(+) = a ubiquinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:23152"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.9" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010002909">
        <property type="protein sequence ID" value="MES1922475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706:SF47">
        <property type="entry name" value="EXTERNAL NADH-UBIQUINONE OXIDOREDUCTASE 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="NADH DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="9">
        <location>
            <begin position="16"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00049010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19014" checksum="78983B6BCD460242" modified="2025-10-08" version="1">MFDALFSSGLPSGRRKVVILGSGWAGYSLARRLNKKICEVTMVSPRNHFLFTPLLSTTTVGTLEFRNIIESARRIKNIKYIQASCKSVDADSRTIECANKNVPDTKISVKFDDLVIACGAEANTFNIDGAKENSYFLKQLSDARRIRNRLSEIFEMACYFRHKRHSEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS33</accession>
    <name>A0ABV2AS33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003967</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002856">
        <property type="protein sequence ID" value="MES1922452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12777" checksum="DA8AAB472BFCC82C" modified="2025-10-08" version="1" fragment="single">MINYKISLSSQILINPLKEIKKKKIYLGSYIELIQSNTDKERYVDELLGIVEYLLLCEQKDKIKDYENIGLLKIIILFKSKKILKTTTKLIIMINYKKNGTFANSNFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG7</accession>
    <name>A0ABV2ASG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ATP-binding cassette sub- E member 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ABCE1</name>
        <name evidence="5" type="ORF">MHBO_004138</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003256">
        <property type="protein sequence ID" value="MES1922621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013283">
        <property type="entry name" value="RLI1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19248">
        <property type="entry name" value="ATP-BINDING TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="221"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="248" mass="27999" checksum="52A40A80D9BC4548" modified="2025-10-08" version="1">MERTQGNFKLKIKGGAFQNSEIIVMLGRNGTGKTTFIKLLAKEIKPDDEIVEIPDLCVSYKPQTIQSDFVGSVRSLLHKKIRGVYTTSTFVTDVIRPLKIYDIIDRDVATLSGGELQRLSITLCVGKKADLYLFDEPSAYLDSEQRMVASKVIKKFILGNKKTAFVVEHDFIMATYLADKIIVYEGQPAKKCIANPAETLENGMNRFLKALRITFRRDPTNFRPRINKMGSQKDQEQKNSGDYFASKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK4</accession>
    <name>A0ABV2ASK4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004156</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003298">
        <property type="protein sequence ID" value="MES1922637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7457" checksum="8CC99B65B54ADA0F" modified="2025-10-08" version="1">MVRFVDPEHLVADHLSCRTICRRQLFVPHVSSPCDRTCREDGHKWSSIFRPHPSTNDLHPNPQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL5</accession>
    <name>A0ABV2ASL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003896</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002711">
        <property type="protein sequence ID" value="MES1922388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24430" checksum="2DB0C648AEC98D48" modified="2025-10-08" version="1" fragment="single">MDREQAIKLLIRVINGARHANYNHTVDLAKLYRTLITGDGMNDMLKKFVRRETDEEFEQRVNITEHIITSVCSNLMDVAYKVPRSSSKSRILKYKDNDEKNLSEIEDILGRFWGDKSLDDYMDTRFIELQHTDPNTFIVTEFKDFNADIERASPYPFEVNSANALDYLYDNNILQYLVCSTPIKYQTKELNNNEYAKKGLRYTIYLPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT76</accession>
    <name>A0ABV2AT76_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Tetratricopeptide repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003862">
        <property type="protein sequence ID" value="MES1922842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="51"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="12751" checksum="AB39BB48B38A9BCE" modified="2025-10-08" version="1">MYVDVQKEPETDQKEPVIDQKVCENAQKDPVIDQEPEPQPEPQPEPQPGPAKKETVGLDLSPKDEARMLITEGKELVREGKMKEALALYEEAYEVSSEVYIKGMISRLKRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT87</accession>
    <name>A0ABV2AT87_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003947">
        <property type="protein sequence ID" value="MES1922876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="96"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18761" checksum="3DB8F701FCEF8E4B" modified="2025-10-08" version="1">MAETTETLKSIENKTIHLEHKKTKNKNFLAPLQRRLFADDSSDNKRDEKFYFDKKSKNKLGEKTKQKNYFDKTKQKRTAKCFPKVVKRVSLGGVSSFNRYRSPSPNKNRGWQTPPANYQPWTPKNVRKSYEDVMVSRETPKLKCISPEKKFILRFYIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG9</accession>
    <name>A0ABV2ATG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004308</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003706">
        <property type="protein sequence ID" value="MES1922784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22678" checksum="9B02E1D010081BAA" modified="2025-10-08" version="1" fragment="single">MLVKLYQQYSDRTAHHFMRSLRSDLVDLACKQLSQGTSDDGEANSSDDRKKEDEIDDLTGNKNSEEKSIDVESMVALVEKKRGLFLKDVFGLLEEIDVDPVLKSEKWLKRRFENRPDNIKNLEFCWILDKLMKCATENPKVLHPQNIPEVSKSTIPAQWWSKKHDILCLILAHEHGYNNWFNAFSNILKNDKNTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH0</accession>
    <name>A0ABV2ATH0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PRP28</name>
        <name evidence="7" type="ORF">MHBO_004429</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003986">
        <property type="protein sequence ID" value="MES1922899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="1"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="22271" checksum="5E3E94B7B56FD1CF" modified="2025-10-08" version="1" fragment="single">TSFEKQASKLRAGAEILIGTPGRLADCLDRKYVVFNQCNYVVLDEADRMIDLGFEAQVVEIFDRMPSSNLQPENTELIDSEKVYRQTTMFSATMPPMIEKLAGKYLRNPVFVAIGDRFGNAAANVRQNVIFASESEKRKLCQEILERTDPPVMIFCNQKRHCDALDKYLHSQGFSCTTLHGGKSQDLRAVFQKYLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ2</accession>
    <name>A0ABV2ATQ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004302</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003685">
        <property type="protein sequence ID" value="MES1922778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00169">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PH" evidence="1">
        <location>
            <begin position="138"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="25304" checksum="06B4AE5F9673016F" modified="2025-10-08" version="1" fragment="single">NKPNDSKLNLSEFSEFVTENQQLLEILEDAFVFEDFTSEEETRGEYENTISANLNRRNKIDDNSNIENHLRKYIDSNCLKESCNLADIITPDSVKKRRRSVKNLNEKNLNKWRDRNLVLPLDLMHAFEQMHHFHHDAHHNGVMYKSGKNFHFLVKRYFVLHESFLYIFRKEESFVPLKAIWMRGCIIRTVNDQTKSKKRRWGIKISFPSDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS0</accession>
    <name>A0ABV2ATS0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Anaphase-promoting complex subunit cdc27</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">CDC27</name>
        <name evidence="4" type="ORF">MHBO_004301</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the APC3/CDC27 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003680">
        <property type="protein sequence ID" value="MES1922777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558">
        <property type="entry name" value="CELL DIVISION CYCLE 16,23,27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558:SF13">
        <property type="entry name" value="CELL DIVISION CYCLE PROTEIN 27 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="120"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19150" checksum="070760B6FB750164" modified="2025-10-08" version="1" fragment="single">KQSAETFENLRYVAPHITDALDTYSTVLWQLGRKTELKTLSKFLLNSFGDKPQFLSVAANNFSLQGAHQKSISCLKRATNIDSEYAYGHCLMAFEYLAINALQNAENQFRTCLQIESENYKAFNGLGKASMMREEFKVAAMYFRKAAEINTGNHVLLSHLAEVNFSFQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU61</accession>
    <name>A0ABV2AU61_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004733</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005040">
        <property type="protein sequence ID" value="MES1923187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051177">
        <property type="entry name" value="CIK-Related_Protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984:SF3">
        <property type="entry name" value="N-TERMINAL KINASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984">
        <property type="entry name" value="SCY1-RELATED S/T PROTEIN KINASE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="21019" checksum="E11C4FD8DE3DFF15" modified="2025-10-08" version="1" fragment="single">IFTKQNVHYFTKNHFKQKFSSSLYNNVDSMISNETFPASTFECWNLAAFIITFRSKDKKDVGVPFYLLRHFKCLLSENYGKRQSPIPDFLNSQFFDNNLINVNLFLLEINLKTKLEKIEFFAKMKKQINNLPRRYLAKKVLPVLLEIVFQDFEKNEDILYLIMTAGNFVDKTEYNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU68</accession>
    <name>A0ABV2AU68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004543</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004341">
        <property type="protein sequence ID" value="MES1923009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6374" checksum="D9C774CA432A39E1" modified="2025-10-08" version="1" fragment="single">MNMSVYRCVYMCREVIFSCMLGNNKNALDKTQSGYSLVLGVHYPYINLPLRYSCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU99</accession>
    <name>A0ABV2AU99_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004798</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005308">
        <property type="protein sequence ID" value="MES1923253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="7094" checksum="19B28550F76FFF0E" modified="2025-10-08" version="1">MGFPQSCMDERNQDGAYSRAVDCYPNYMYMHGIPVENRDPVVYGLSSTAVCAFHETIFNVPVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD1</accession>
    <name>A0ABV2AUD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004832</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005428">
        <property type="protein sequence ID" value="MES1923283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7207" checksum="1802C610AF07C96E" modified="2025-10-08" version="1">MKVVVNANSDEEAEQLAKDAWDNGDIYFDENNCDIGSIEDNNLSYCAIEGTPILFTDFDIRDND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF6</accession>
    <name>A0ABV2AUF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004842</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005478">
        <property type="protein sequence ID" value="MES1923293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9580" checksum="60BDF0F401B114F9" modified="2025-10-08" version="1" fragment="single">MPVQGCLTTLHQPNLYDIKMMNEPQVELKAKIIVEAIVSADQWDEYILLSSTEIILKEFFMYMNIEGYGIHEKTIFVYPLHC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI2</accession>
    <name>A0ABV2AUI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004868</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005590">
        <property type="protein sequence ID" value="MES1923312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6637" checksum="6C605C210A4AAD04" modified="2025-10-08" version="1" fragment="single">ATSGSNTRRDPDLIPGDRFRPMMKPGICKTSTMPERRSSSKTSCQEYMWTSLARKKKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL2</accession>
    <name>A0ABV2AUL2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004898</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005697">
        <property type="protein sequence ID" value="MES1923337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="17393" checksum="86D7C844EDAC2AF8" modified="2025-10-08" version="1" fragment="single">IVNQALLSVGAKKIADLDSTTDHVAQAAKLFYDAARKEIIASANWGGNTWEAYVEGKVMELYTDPNGEWDLAVVDLNWPGDFSEGNERLYVEFGEDNIVRVDIMYHSPSRVFYAVSYGETIAHQGIARITNYLSLRMDAKNSICTIAGLIHPGHNIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN5</accession>
    <name>A0ABV2AUN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004936</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005864">
        <property type="protein sequence ID" value="MES1923371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13256" checksum="6FFCCBC632F2FB07" modified="2025-10-08" version="1">MIKKLIAIKKTKIQDLGLEEQEALKAVDDRKIEIERRIKILEGIKTQITYNLVARPSVELFSSTGIDYDVLDEMREFPCESKFRMDDFEPGGIEIATLEREFGDLLHFTDETLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ9</accession>
    <name>A0ABV2AUZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004756</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005120">
        <property type="protein sequence ID" value="MES1923213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="5"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="16159" checksum="B28050F8F52D8756" modified="2025-10-08" version="1">MCKEIQTLKTAIQELYNARKDYEDAEQKLRQAREEIQELQRENKEKDRKIKVQQQELLEKDRIINDKDRIINEKDRQINDKERQILEERNRNIEKEELAKKREKRLLDELEQIKSKIQELERIISSGSRTKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV44</accession>
    <name>A0ABV2AV44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">0507 ATP-dependent exoDNAse (Exonuclease V) alpha subunit - helicase superfamily I member</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">uvrD2</name>
        <name evidence="2" type="ORF">MHBO_005116</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006668">
        <property type="protein sequence ID" value="MES1923530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.80">
        <property type="entry name" value="HRDC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002121">
        <property type="entry name" value="HRDC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044876">
        <property type="entry name" value="HRDC_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00570">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00341">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="HRDC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50967">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HRDC" evidence="1">
        <location>
            <begin position="15"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11407" checksum="CF2D9DFFE2852336" modified="2025-10-08" version="1">MQQKVQKIEVDTQSDIKHIEVYNALLAWRNAKASEEKIPGYCILNTKSLIGVANTLPSTADELLMIPGIGKIKVQKYGASIIEIIDEYAGVQGSLFRKETTLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV70</accession>
    <name>A0ABV2AV70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005162</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006929">
        <property type="protein sequence ID" value="MES1923568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8650" checksum="C5A8CA477FC2C400" modified="2025-10-08" version="1">MSKIKKTSFFVCSPEEYAKAAMKSIGYGAIESPYPAHKLQMLLTGMLPICALKKLYTYLMFDLRKRSLEKLKRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF91</accession>
    <name>A0ABV2AF91_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">26S proteasome regulatory subunit 6A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPT5_1</name>
        <name evidence="4" type="ORF">MHBO_000321</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050221">
        <property type="entry name" value="26S_Proteasome_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23073">
        <property type="entry name" value="26S PROTEASOME REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA ATPase AAA+ lid" evidence="3">
        <location>
            <begin position="37"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11004" checksum="2CD65676F86C6FB5" modified="2025-10-08" version="1">MRSGRLDRKIEFPLPDEPARKRILAIHSKTMTTHSEVNFDELARGTVDFNGAQLKAVCVEAGMIALRREAKEIAHEDFVDGITQVMQKKKANLDYYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF6</accession>
    <name>A0ABV2AFF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">rRNA-binding ribosome biosynthesis protein rpf2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPF2</name>
        <name evidence="5" type="ORF">MHBO_000370</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RPF2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000056">
        <property type="protein sequence ID" value="MES1918401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007109">
        <property type="entry name" value="Brix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039770">
        <property type="entry name" value="Rpf2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12728">
        <property type="entry name" value="BRIX DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12728:SF0">
        <property type="entry name" value="RIBOSOME PRODUCTION FACTOR 2 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04427">
        <property type="entry name" value="Brix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50833">
        <property type="entry name" value="BRIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Brix" evidence="4">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16121" checksum="71250054C0CA4B61" modified="2025-10-08" version="1">MDKLKKIKNLFVDFFRGKETDFVDLKYIKRAIVFAAIDFETIRFTDYAVTIKQDNNVSLEEIGPSFELKLKRNYIASEKLLSTSLKKPKKMVNEPKKVKNVKTDNFGSKIGKVHVDKQDIRKINKRKFKGYKKNRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH3</accession>
    <name>A0ABV2AFH3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000384</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000059">
        <property type="protein sequence ID" value="MES1918416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="16871" checksum="548834A077146ECA" modified="2025-10-08" version="1">MISALRRNHCRSRNTLLSLNAHARDFARRSMLSKAAKKRFVDFSLKSPREKAMALLAPLLLAGTLSFCFYSLLVDDKHIKVSSSTPVLEGGLLQAEEADQGAPAARVGGEPARGEDGSSELGGHAHVRRVQRFDLTLRGRRGGPTRSGRAWTSSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ0</accession>
    <name>A0ABV2AFQ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">YOD1_1</name>
        <name evidence="2" type="ORF">MHBO_000475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057766">
        <property type="entry name" value="Znf-C2H2_OTU1-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24560">
        <property type="entry name" value="zf-C2H2_OTU1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="C2H2-type" evidence="1">
        <location>
            <begin position="24"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6252" checksum="91060A633871DB96" modified="2025-10-08" version="1">MQNFAAQLKEQNQFVDQKNYTLRCLVCRRCFVGNEEAVKHGSETGHSNFAEFIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT9</accession>
    <name>A0ABV2AFT9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Signal recognition particle subunit SRP72</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000494</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SRP72 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000079">
        <property type="protein sequence ID" value="MES1918536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013699">
        <property type="entry name" value="Signal_recog_part_SRP72_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026270">
        <property type="entry name" value="SRP72"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031545">
        <property type="entry name" value="SRP72_TPR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14094">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE 72"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14094:SF9">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE SUBUNIT SRP72"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08492">
        <property type="entry name" value="SRP72"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17004">
        <property type="entry name" value="SRP_TPR_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038922">
        <property type="entry name" value="SRP72"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="7" id="KW-0733">Signal recognition particle</keyword>
    <feature type="domain" description="Signal recognition particle SRP72 subunit RNA-binding" evidence="10">
        <location>
            <begin position="515"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="513"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="570"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="570" mass="66096" checksum="B95FC5C0ECD0B2E6" modified="2025-10-08" version="1" fragment="single">MTATTLTEKTQQKLLTLIEQRNYKAITKICNMLLSTAKIDTQKKQLFQKIKIICSIHLGKFDEAIKDLAHPEKFPFEYAYCHYRLDKLDDSNQNLKKILQTDPKRSPRNMKNLLAQIQYKKGNFAGAARLYEQIKERHYEEDVNLLASLINKERFGTENVSENITNSKEYEFLYNRALKQSLVDKNFELSQKTVSDSERNAVKLLKSENANNREIQTELFEILTLKAINYLGSNKPEDAKRILQTLFEDEENAEKRKIAKINLTALENSFGKSKYFQSKRNFSYPRQKMLQHQKLAIRVNNHLTDSLVAKKKKPSDKDELHFANSNKSNFAQFLEKIADLNFDEAAKEHTRQTDKSFVWLPAVQAIMANKYLAEIESVKKEQTDVDSRKSGELFVLGKFEGALKRFAGTDFGETDGKTKILYLRRLLDDAVQFCLRMKNFEAATRFLEKKLGFELSGPERRKTNAELALALSFCDANEAKDCAMKLGLEKEDFSETKLLSKGVSDKMAITTYSRKKKTETEEEEDAKKRKQKNEKKIEKIGKEDLERWLPLKQRSYFKPKKTRKKNINGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX7</accession>
    <name>A0ABV2AFX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000523</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000086">
        <property type="protein sequence ID" value="MES1918571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="283"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="526" mass="60762" checksum="4B71FEFD3D85A9BA" modified="2025-10-08" version="1">MTKSTQEHADKAICAIFNRLFLKVRLAKEMAELESDQIGSKNILLGWADAIESSLRSGDSRPEAKAPGGKNIFLSVFNDLQIFERLLKLFVLGGSSKLQIGVLSYMFSMCFYGSEDFYFWFLKQILPISAALRESLGDLKNCAEVDQFLSAITAFLKLPSGGSGDDFFLLSLQIDWGDKTEKKNLDQIGKDVETANENIRKLVEAARKVKSCRDRFIFSAPLRCGDEKDFFDSIKKRVRALHKTGKEELESKANRFRAQNNTPKSVYRRRVIAERVKPLLSQIEKRKIEISEKEKMAGELEKKLLETREEIGNLRKEEKELEIELKSEQLKIEETVADFYKDHKKLGEEIRVARQKNKAIELFSSFISEVELKFKNDYAPQRKIFENIQHKNYSTLLLQTRNLFSLLSTLSEQTVAQICKIKNFFSQINSHFQKALSFEISCDDKNLYRMNSEDQYVQKLVSRGETFLRKISFCVEKTCLFLSEAVPFQLVRKELLDKLDSNVLRSLNLDEHFESIFEKENEIALE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ5</accession>
    <name>A0ABV2AFZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000051">
        <property type="protein sequence ID" value="MES1918384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="414" mass="48054" checksum="F54BC17126536F34" modified="2025-10-08" version="1">MESPIREIDVDNGSLKILQYSNFVKYLFADKRDSLFQTYLTILENCPLMPRKYDVFMEEVCAYIEFPMEDYKRIESEEKPGLGMRAIRTFLFFLKILRTRGFSIAAKMDSQDMLCDANGNIVFFTVQLCKLSENNPGTDTNPIVATLENLKEKLSIIPEELDNSLALAKKSGSVNFEILLKSLSGPNEIHDQNNVWLLRMEGENLMVMKDDEVVKCQIEFQLRNEAEIVICIGGELESLLVRKKCSAGKEYVHKEKQEDKNFIYYVLRSFFPSEKFTVGQVERIRLWEMELDTVYKKCRDPEQYRVEEKMTSKLQHSNFHTPKTYTVIEDSNDSLTYVFNENNENEILHECLKNFMNVCPFVPSAHGQFPTLSTKMEEKTDWGRASDENNKSFVLNFSSTSQSSHHFCIASDRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG09</accession>
    <name>A0ABV2AG09_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">methylated diphthine methylhydrolase</fullName>
            <ecNumber evidence="6">3.1.1.97</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">DPH7</name>
        <name evidence="10" type="ORF">MHBO_000199</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>diphthine methyl ester-[translation elongation factor 2] + H2O = diphthine-[translation elongation factor 2] + methanol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:42656"/>
            <dbReference type="Rhea" id="RHEA-COMP:10172"/>
            <dbReference type="Rhea" id="RHEA-COMP:10173"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:79005"/>
            <dbReference type="ChEBI" id="CHEBI:82696"/>
            <dbReference type="EC" id="3.1.1.97"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Protein modification; peptidyl-diphthamide biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DPH7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.97" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061685">
        <property type="term" value="F:diphthine methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052415">
        <property type="entry name" value="Diphthine_MTase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46042">
        <property type="entry name" value="DIPHTHINE METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46042:SF1">
        <property type="entry name" value="DIPHTHINE METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0853">WD repeat</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="251"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="154"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00038092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00039131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="31823" checksum="6116BB87EFEB22CA" modified="2025-10-08" version="1">MKDLAKLNTKYNFDAIETFNNCDFPRANSVFACGSYSLNEKTKIRSGAIAMYNFGQSSPVQISFAKFDFAVTDLKWQPFSDFISSANSDGSVKIFRAEPSNSFGLELLLNFDLSNSSLALSLDWSPFDNKAIVASLSDGHIGLIDLENHSIDKFRAHNAEVWNVVFDSENPFVVYSGSDDASMKIWDMRSKSETSSKNFEYGVCSIAPDPHHGDLIAVGGYDQHVRIFDKRNIYSPVNSFNIGGGVLKLKLLMYVLIKGLAFEMAQTFAWVVIGKWDEKRMSRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF3</accession>
    <name>A0ABV2AGF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">USP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02257">
        <property type="entry name" value="Peptidase_C19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="20106" checksum="4079E9E4B74D8216" modified="2025-10-08" version="1">MPSDDLALKMKNLKIESGENLTLEKCLEHFFAAETIEGPLSICDQCRGEDLKVRKWSRLLDSPDALAIHLKRFRNRNGELRKNEKNVAFSAELDLSRYFSERVKEKSGAQYKLVSLVKHSGSLKSGHYIAFVQDRGSENGDWYCFNDSKVKVVSRSKVFKEEAYLLFYEKLNFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP3</accession>
    <name>A0ABV2AGP3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000757</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000142">
        <property type="protein sequence ID" value="MES1918861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19729" checksum="4690F486D724591C" modified="2025-10-08" version="1">MTPDKICKRHNEIKKNQKSDDDATLPANEENNLIVAELNPNTQILQVHGKNNQYQYRMSKPEINTNIGNIEETYCEMNDYKYNDDLSLKNYIGNRSPSSLSSAPDISTSAPIFLNIKNKRIEKSKKSRLMRRNLSDKFDELSHVLYGSFLFLHIFDFENGSKIFVNLFFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU9</accession>
    <name>A0ABV2AGU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Proteasome subunit alpha type-2</fullName>
            <ecNumber evidence="3">3.4.25.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PSMA2</name>
        <name evidence="3" type="ORF">MHBO_000797</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase T1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000152">
        <property type="protein sequence ID" value="MES1918904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 2 3" id="KW-0647">Proteasome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="16867" checksum="68640BCF63C82EC0" modified="2025-10-08" version="1">MTAKGRKESQLYDLKFMEKIPVSQLAKSLANVMQEFTQSGGVRPFGVSLLLCGYDDSGPHLYQVDPSGTFWGWKASAIGQNVNSSKAFLEKRYREDIEIEDAVHTAILALKENFDGEMNQSNIEIGVVGEDRVFRILSENEVKDYLEEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV6</accession>
    <name>A0ABV2AGV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000801</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000153">
        <property type="protein sequence ID" value="MES1918911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="16132" checksum="BA657F33BD4721D6" modified="2025-10-08" version="1">MLFSDIAPNFKSDFVKKMNDNKILKLEIKFGKKKIEWNELINFDLKMQSFFPLKLLFDRISVEFNEKSLNFEIYPKRKRVQNSTFLETDYLGKEEICFCKFIKPFYKETVLKCEKISILAKNFIFEFDFFGENG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW7</accession>
    <name>A0ABV2AGW7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000466</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000073">
        <property type="protein sequence ID" value="MES1918502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1112">
        <property type="entry name" value="COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="117"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="131"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="157"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="200" mass="18442" checksum="1FCF112633B363A8" modified="2025-10-08" version="1">MSHYYSNYDTSMCGPPGPPGPPGCPGPLGPPGCPGPQGKKGSEGKPGFQGPQGPVGSPGDPGKPGLQGQQGIQGKMGPIGPPGEKGCPGCPGAPGQTGQQGPVGPPGKTIVGPPGQPGVAGQPGPIGQPGQPGPPGPATKGPPGPPGPPGQTGSNGPPGPPGTPGIPAPPAPPGPPGPPGPPGPPGPPGALRAAIAKASH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH09</accession>
    <name>A0ABV2AH09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Smad nuclear-interacting protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SNIP1</name>
        <name evidence="3" type="ORF">MHBO_000848</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000167">
        <property type="protein sequence ID" value="MES1918964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22676">
        <property type="entry name" value="FHA_SNIP1_DDL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050923">
        <property type="entry name" value="Cell_Proc_Reg/RNA_Proc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23308">
        <property type="entry name" value="NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00240">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SMAD/FHA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FHA" evidence="2">
        <location>
            <begin position="79"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="20381" checksum="B3A9F41D2720190C" modified="2025-10-08" version="1">MRKKDVPRYKKRIEKSEKQTKMNLERTDALKKSIDPNTKTALNYVEPFDKTETDEFWRLYVYKNEEKLNVLHLHRKTMFVFGRDKRVADVVLENPSCSAQHAILQYRNKTVSENEEEFAAKPTPYLIDLGSTNGTKLNGQKLEEKRYYELYESDVLEFGLSQRKYVFLQASK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI3</accession>
    <name>A0ABV2AHI3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pyruvate dehydrogenase E1 component subunit beta</fullName>
            <ecNumber evidence="4">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001022</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>N(6)-[(R)-lipoyl]-L-lysyl-[protein] + pyruvate + H(+) = N(6)-[(R)-S(8)-acetyldihydrolipoyl]-L-lysyl-[protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10478"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000213">
        <property type="protein sequence ID" value="MES1919158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027110">
        <property type="entry name" value="PDHB_mito-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11624">
        <property type="entry name" value="DEHYDROGENASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11624:SF96">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="TK C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Transketolase C-terminal" evidence="5">
        <location>
            <begin position="41"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="19583" checksum="47BCECABAA4E6148" modified="2025-10-08" version="1">MVKSAIRDDNPVLLLEHELVYGDSFPISEKALSKDFLVPFGKARIMREGENVTITASSISVKKALAAAAMLEKEGISTEVINLRCLRPLDTETILSSVKKTRRLVSVEEGWPQNGVGAEMCALFMERNRFYELDAPVERVTGADVPMPYAKELEEKCTPSPEDIVKACKRTLHKDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ4</accession>
    <name>A0ABV2AHQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000892</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000179">
        <property type="protein sequence ID" value="MES1919014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10973" checksum="98800681606E5E3B" modified="2025-10-08" version="1">MSDEDKNKKKAIESKQTEQPKIPKNKQRISKINKDEELAQQKEMKKKSKKKLIRSKLKFKTDKPKKITKAKKKSATDKLDRRCKQKHDKFCM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT0</accession>
    <name>A0ABV2AHT0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001032</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000215">
        <property type="protein sequence ID" value="MES1919167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="32"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="225"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="36"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="88"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="119"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="316" mass="36112" checksum="20E837A95AF9F5AD" modified="2025-10-08" version="1">MPRPEKCPLSSKTLRKKVSIIIEEKSKKFRFFGSKSSKKSSKKSSKKSSKISLSKKHSKTSQKDKPILSKTSEKKSEEIGKTNQIESELEKMSLEFHKKPSIDAKDSEIKSSRKDNGSPKKSNSQNSLEMENETNSQIFDDPKFSNGVLEKNGDTKVKTNSNFENEPKLEQVLERWGSISSAQNSIPRTFSKARSGLLLVLREKQKHKSKKVLFSETSAMVAKVLAEYEEVIKKQNQIIAKKEEEIEALECSVPAKKCSNKISGLCIHEVSLEKERKLFEKRLVELKVEVANYMDQVNNLQFYIQRKKMSFKSTKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW1</accession>
    <name>A0ABV2AHW1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal RNA-processing protein 14/surfeit locus protein 6 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="103"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="135" mass="15987" checksum="5300C9D6846B3CC0" modified="2025-10-08" version="1">MLNSSNNMLDLEDAEEDIMGHQFESSADGLRKMQKINEIVSKNQSYINELIEKDKQKNKLQDLRANSDLKRKQSAAEKRKEDIWDKAEKSSLIASEDRLLKLHKKLKKKRKKEKKHKKIKKAEKKKKKRSEKKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI26</accession>
    <name>A0ABV2AI26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Chromosome segregation in meiosis protein 3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000906</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000182">
        <property type="protein sequence ID" value="MES1919028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012923">
        <property type="entry name" value="Csm3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07962">
        <property type="entry name" value="Swi3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chromosome segregation in meiosis protein 3" evidence="2">
        <location>
            <begin position="26"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="146"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="159"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="194"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="28370" checksum="0B858581B10FD9EF" modified="2025-10-08" version="1">MLSDSEQKLDENVDKKERKKKTVPRIRAEILMSEKGLKSLLADFNSSGIFDLTSKKLRVESLMRLFKRWIEEMDPKIDFEDAMDDIFLLGKSREITNYVRNLKRDFFDENAKQHNLDSEDFDFLKESVAANKEDFAEKSRMNIKLPNAENTEKDEKMENFSNQRDSTETIASPNKKIIDEKVEPQTEISPANNKKSENIEKENSENTESAMDNIGLTETQKQRIKRNRERALEIRKLKRPCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI34</accession>
    <name>A0ABV2AI34_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Core Histone H2A/H2B/H3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001186</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone H2B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000259">
        <property type="protein sequence ID" value="MES1919336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22910">
        <property type="entry name" value="HFD_H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000558">
        <property type="entry name" value="Histone_H2B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23428">
        <property type="entry name" value="HISTONE H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00621">
        <property type="entry name" value="HISTONEH2B"/>
    </dbReference>
    <dbReference type="SMART" id="SM00427">
        <property type="entry name" value="H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="3">
        <location>
            <begin position="23"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="22"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="13922" checksum="6B27F5E934C80207" modified="2025-10-08" version="1">MVKKVAKKSIAKATTSSSTKPNPRKKNKHHERNFGNAVYKVLKEIHQDIGISRESMMIMNSLVLHNMDKVLTEASLLLKKENKRLLSFGDIQSAVKLVLPGELAKHAMNEGLKAVNKFKTSRNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI52</accession>
    <name>A0ABV2AI52_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Ion transport domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_001183</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000258">
        <property type="protein sequence ID" value="MES1919333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005821">
        <property type="entry name" value="Ion_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028325">
        <property type="entry name" value="VG_K_chnl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11537:SF254">
        <property type="entry name" value="POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN SHAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11537">
        <property type="entry name" value="VOLTAGE-GATED POTASSIUM CHANNEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00520">
        <property type="entry name" value="Ion_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00169">
        <property type="entry name" value="KCHANNEL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81324">
        <property type="entry name" value="Voltage-gated potassium channels"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0630">Potassium</keyword>
    <keyword evidence="5" id="KW-0631">Potassium channel</keyword>
    <keyword evidence="3" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="Ion transport" evidence="12">
        <location>
            <begin position="14"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16319" checksum="5E823FC6FD55C69C" modified="2025-10-08" version="1">MKFGFCNKYLNRIFVFLISPLNFIDLIIILGFSTNTLLNLFYNSNPAQLLSMLIFLRLIKLASFTKGFWVFYYVLGQSMLYILYILIFMSILIILSGAMIYYVESYYNDENNPSLYKTIFDGMWWSVVTVSTVGFHIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI74</accession>
    <name>A0ABV2AI74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATP synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">atpD-2</name>
        <name evidence="1" type="ORF">MHBO_001226</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000274">
        <property type="protein sequence ID" value="MES1919384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="563" mass="63789" checksum="3F734B4165387096" modified="2025-10-08" version="1">MKIKSLNSARHVPKTKGFIDFITADGKNIISNRLNVCFKIKNNTIWAKNIRLLMKTDHGPIYRCFVIGSTNSKIPVIPNGAEGILTSKEALPNLKTHHFGLFLDGFLNPHSKMGKIDFKQLSKLSENEPFSEEHSQIGDVETNSENTKIGGEDKNTDKTRNFAEDKNRTFAAIPKTTNPDKLINKNILSSKNLDENSATEKSSEVQLETGIKAIDLFAPITNSSDVATVFCDNGLANSVLKWIAFNVSKTCNKFVSIYSGDYGKAQKDYKDFVKMGVFNDFAQNKSAGEISKSQKNLEFGFRSVMFSNSAMDLPGIKVATANQSLKTAFKAATNLKSGALFLYLFRNSVIDAYNLMNMSKYGKFDPLSKLNEYNWVKTDLETKDIYQKLRYDSKYPEFYENFTKTENLLTISSLELPSDVLDGLLISPSAILSKQDAVITFKKCRTALNTEITVPIDPIRTTSKFLFEQNILKKHRKTSLMVRRQYIDRESFYLKKKFLLKNSNFEMNHIASKRLKILDAYLFTQKRHSFVPIRNTIADCSNILEGKYDRAQIKDFINIGEIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB3</accession>
    <name>A0ABV2AIB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001098</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000236">
        <property type="protein sequence ID" value="MES1919239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="15600" checksum="F5A3F3D418E9698D" modified="2025-10-08" version="1">MIEIKDGDCLYNLKVDSFKIHGKFCKAKINDMFIDVETTNSNLFWGKGYVKKIVLHDSSPQLILAKGALISSKLYETFGNYHICTPNEIDTAENIEDFTSSRVGIALQPTAAGDVEIVYSYGVEKNSDFKGSWCCQDGLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE4</accession>
    <name>A0ABV2AIE4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NAD(P)H-hydrate epimerase</fullName>
            <ecNumber evidence="3">5.1.99.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">APOA1BP</name>
        <name evidence="11" type="ORF">MHBO_001281</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6R)-NADHX = (6S)-NADHX</text>
            <dbReference type="Rhea" id="RHEA:32215"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:64075"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(6R)-NADPHX = (6S)-NADPHX</text>
            <dbReference type="Rhea" id="RHEA:32227"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:64077"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.99.6" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000292">
        <property type="protein sequence ID" value="MES1919451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10260">
        <property type="entry name" value="YjeF N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004443">
        <property type="entry name" value="YjeF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036652">
        <property type="entry name" value="YjeF_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032976">
        <property type="entry name" value="YJEFN_prot_NAXE-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13232">
        <property type="entry name" value="NAD(P)H-HYDRATE EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13232:SF10">
        <property type="entry name" value="NAD(P)H-HYDRATE EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03853">
        <property type="entry name" value="YjeF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64153">
        <property type="entry name" value="YjeF N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51385">
        <property type="entry name" value="YJEF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0630">Potassium</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YjeF N-terminal" evidence="10">
        <location>
            <begin position="1"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14397" checksum="E251A542FD153612" modified="2025-10-08" version="1">MGIPFLDDKEFASALETDSDQQFDIIVDAIFGFGFKALPREPFYGILKVILEYILWQFLARTKVPIVSIDVPSGWDVEKGFSGVKEEIRIDPTVLVSLSAPKLCAKYFFGAHYLGGRFIPPFLNQNFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF5</accession>
    <name>A0ABV2AIF5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ADF-H domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001287</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000294">
        <property type="protein sequence ID" value="MES1919457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002108">
        <property type="entry name" value="ADF-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00241">
        <property type="entry name" value="Cofilin_ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55753">
        <property type="entry name" value="Actin depolymerizing proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51263">
        <property type="entry name" value="ADF_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADF-H" evidence="1">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14064" checksum="6CE9FBA81943E2CD" modified="2025-10-08" version="1">MTTSFSDNCHSAYSEFKTKDIKTNYLVFSVEKNGSNHKIDVSRKGEDGLTGLKDLLSSEYDDKVAFAVIRVNGVDNKNELVSTRNKFIFICFVGSKTPVRVRGAASFLSPQVQNFLGSFVQYTSFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN8</accession>
    <name>A0ABV2AIN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001353</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000321">
        <property type="protein sequence ID" value="MES1919541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7335" checksum="C8BF083DADBB8D1B" modified="2025-10-08" version="1">MMTQPLISNRNVNLSNAEARKDVSSFIHDRKRSSKNENFLKQFLLNFLYKKNRFTKRNFTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ56</accession>
    <name>A0ABV2AJ56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001483</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000369">
        <property type="protein sequence ID" value="MES1919699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="11436" checksum="1FA886CFC928A628" modified="2025-10-08" version="1">MISLAVMNAAFGTGVIGTGIFATRSYSKFMTHLIFGGNYIFSSYMNYGKNPDGKYFGFVNSLGLGGAMLLRNMRAQSIESTILLSLAVVAAMTNAYAALVTDSKILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK85</accession>
    <name>A0ABV2AK85_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000506">
        <property type="protein sequence ID" value="MES1920086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16846" checksum="4E5C85B37B4B54BF" modified="2025-10-08" version="1">MTSLSGRDMIPRFFRLLILLPAAAYCVFHTFLSMISSFVIPFTRVHIVLILFPFFNVFSALMMLPKLIGFLFENLPFFNFEARFMSGYQNGLTVIYMLLMNMIFTLIDHILPPSPPNSEDNFRKRVYAEWYDQEMKHPISVWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC1</accession>
    <name>A0ABV2AKC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000519">
        <property type="protein sequence ID" value="MES1920119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13832" checksum="FC303D7258DB95B5" modified="2025-10-08" version="1">MEQIKNKIDNEIAKNEKIELKRRKRIKEMIDVEENDIFIDRTNKKIKSVEKEETEILIEETNLKLKLEKLEEKLNSNKVVENDSLDSFMADINNESLKRQIAAIHKRLKQIRNSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKI3</accession>
    <name>A0ABV2AKI3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000545">
        <property type="protein sequence ID" value="MES1920193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14890" checksum="C381FC8D6A40034B" modified="2025-10-08" version="1">MLKIFRRTVLKNRLLVIPKSTYYTDRVTFTEKEHYKVVYDPPLEGETEEEWRRRVPNIYSPCKRYSDVVDIPFLDRSLYLLMEPAPHGHNFKEQPVIKMSPEYQIGWMFSDLWRQPGATKDNHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKJ3</accession>
    <name>A0ABV2AKJ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADP-dependent oxidoreductase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001657</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the aldo/keto reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000441">
        <property type="protein sequence ID" value="MES1919913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd19071">
        <property type="entry name" value="AKR_AKR1-5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="entry name" value="NADP-dependent oxidoreductase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NAD(P)_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43827">
        <property type="entry name" value="2,5-DIKETO-D-GLUCONIC ACID REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43827:SF3">
        <property type="entry name" value="NADP-DEPENDENT OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="NAD(P)-linked oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADP-dependent oxidoreductase" evidence="4">
        <location>
            <begin position="5"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="24253" checksum="0996D5F4C69500F2" modified="2025-10-08" version="1">MLNEKTVYDCAVQSLKDLGTDYFDLYIMHWPIPDIDDRSKYKSPENKEKRFMAWKAMQLLEKEGKARKIGISNFMVNHLEHFLGNTTKSPYLNQVEFHPYLDLDDLKHFCDDKNIIVEGYSSLGHGNNALLKEDVVISIAKKLGKKPAQILLSWSLHKGVKIIPKSGTFERIKENFDSVSIRLDLDDIEKINSLRSKNKRFCLDPNEMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS4</accession>
    <name>A0ABV2AKS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001977</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000590">
        <property type="protein sequence ID" value="MES1920291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17178" checksum="CDB1510FA4659715" modified="2025-10-08" version="1">MSVSVNKLIDKINKKIVFHKKVEKHSKRIATAIFNPKKSDIDFDYLFNGDFDNGKKGIIEFVFETTKSNKKSKNICLKLAVILVTENENAKESLKNCNLNYEKSVKYLFNKEDADFILNLINFRQDCKKLVEFEFKKMTIRDEIISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL15</accession>
    <name>A0ABV2AL15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002031</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000625">
        <property type="protein sequence ID" value="MES1920353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046592991" evidence="1">
        <location>
            <begin position="20"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="428" mass="48832" checksum="B9C980B548661C27" modified="2025-10-08" version="1" fragment="single">MKMKYTFLMLVQMPLLLFSQIDRLEDINEKRLFSTKYCTKAQLNAIFKTAKINSVDNLCPTTNPIDSSCYIYCTEEFTVLNLPVPNPYAPVTCKEDGWRYYQITQQKYIEIDKNKRMFTCRTVTVADNYCPLNLDKKVLAAKFPFTGLGPDFDFVVECVKDLTKKMVVICDNKNSLLVKTSKVKFNSTCSRSFCKEDCVLENLLRLLSKNESCSCTKPLHNFGTTCSIWCNTNRQIFDLDLPVVTQIATCRGVWNVYRNANYVAVTSKNLGRCVDVISKHEVCSVAEIDHDIVRLSILAWGFTSSEAPTSVCVTSANTDIPMECRKDVIFVRSTRLKYLDVYRRRCKSPCLTANLTSAIMDRNLFSLCRDNQYPFGGKCVARCFFGTLLDSDLRSTEAELICNGEWDYLFSKVLGTLKPVTDPRFRCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL31</accession>
    <name>A0ABV2AL31_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002049</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000635">
        <property type="protein sequence ID" value="MES1920372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046789260" evidence="2">
        <location>
            <begin position="24"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="18172" checksum="4ADF3A6649F2FF1F" modified="2025-10-08" version="1">MNTINIIILFQIHFLLFAKFSLSSNSTILNNSCPLPKLTEDQTFKKTTTIFKDKSTKTLFCKEKKFYNSAIRYNVFEKKILCDVEKQKYFDVENGQKYDFESTEICHYSYILVSCTFISVAYSLLNCLNLLRLYFKNNNEENNNDNQNIEMEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF0</accession>
    <name>A0ABV2ALF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">AdoMet-dependent rRNA methyltransferase spb1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">SPB1</name>
        <name evidence="11" type="ORF">MHBO_001966</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000583">
        <property type="protein sequence ID" value="MES1920279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01547">
        <property type="entry name" value="RNA_methyltr_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050082">
        <property type="entry name" value="RNA_methyltr_RlmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015507">
        <property type="entry name" value="rRNA-MeTfrase_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012920">
        <property type="entry name" value="rRNA_MeTfrase_SPB1-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024576">
        <property type="entry name" value="rRNA_MeTfrase_Spb1_DUF3381"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10920:SF13">
        <property type="entry name" value="PRE-RRNA 2'-O-RIBOSE RNA METHYLTRANSFERASE FTSJ3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10920">
        <property type="entry name" value="RIBOSOMAL RNA METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11861">
        <property type="entry name" value="DUF3381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07780">
        <property type="entry name" value="Spb1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 11" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Ribosomal RNA methyltransferase FtsJ" evidence="8">
        <location>
            <begin position="24"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3381" evidence="10">
        <location>
            <begin position="232"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal RNA methyltransferase SPB1-like C-terminal" evidence="9">
        <location>
            <begin position="511"/>
            <end position="667"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="389"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="498"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="498"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="670"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF07780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF11861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="670" mass="78058" checksum="713F95A784CDFFF7" modified="2025-10-08" version="1" fragment="single">MVKKKKLAKTRLDKYYWQAKQQGYRSRAIYKLIQIEQKHELLNSARCIIDLCAAPGGWLQGCKKLAPLDAKIIGVDIVPIPNIPGVTTFQSDIKSSQCKAQLNRILNGQKADVVLNDGAPSVSGNWDKDSYDQVELSLYALRLACNFLNKGGSFITKVFRSKDYTAFLGSCQHFFDKVISTKPHSSRDTSAEIYVICKNFRGPKDLKSGMLDPKIVFKCDETSNKTKNVFKSDKRNRSGYEKDLLTIKTANLMEFVKCKKPAEFLADLNRIAIDDDSVKALSGLAIEEEIKFLCEDLLLLSKTDFKRLLKFRRKALMLLKKSLKETKKEDKPKLEDDKDKTINLLEKKKKETRRRKHKEKMKSLKRLRDKASTNNFALSSDEELFSTKKKTRGAVDNEENEIEQNSENSEFEKESYLVEQEEYFDRMYQEYKEKNDKIMDKEKAENIGENEIGEKFDIFEKGILSDFRKKMILDESKDESKMNELDFKKSYKKQKAENNKKKIDKRMSGRKAEKTNMIEKEEKSMFEIVPESSSENSCDSEAIAETLAIGKAMLNKKRRRDMIDDTYRRNVFNDHDILPEWFVEDEKKNFQPNKPVTAKEIAEFRRDNTRKGAMEKKEIEAIARKKQRKRKRYERIKPRINSVMAGDMSEKQKTIAVEKLKKSYYKRKRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM6</accession>
    <name>A0ABV2ALM6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fcp1</name>
        <name evidence="8" type="ORF">MHBO_002032</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000626">
        <property type="protein sequence ID" value="MES1920354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039189">
        <property type="entry name" value="Fcp1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004274">
        <property type="entry name" value="FCP1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23081">
        <property type="entry name" value="RNA POLYMERASE II CTD PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23081:SF36">
        <property type="entry name" value="RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03031">
        <property type="entry name" value="NIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00577">
        <property type="entry name" value="CPDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50969">
        <property type="entry name" value="FCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FCP1 homology" evidence="7">
        <location>
            <begin position="92"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="505" mass="57392" checksum="529A06B77613BAEC" modified="2025-10-08" version="1">MAGLSSDPISVILKSPISVRTETSLFIKFSFLVLEDGINTVLVKRRSHDINENAVNSDKKQKPSESPKWNEFADKYQKKCNLGPKKDKKENTKKLRLRLYLDNDETLVSAKMAEIIPSDIREKNWENNVCDYKAKSSSKTAVKLYLKIRDGVLEGLKRLHKLFDIVISSTGEKRYISEVVNILDRDKSLNIEIVAGDQNSPSSNKSVHRSGKVDEKHCLVLDNLLLWDEQHILVESPKFDFWDHASLFAAKKSDNFFPVFESVAVAVYQLIDQDIVSSTEEALKAIKKSVFAGKTFRFLGVPTKKQIITIESLGGRVSESPLWKNDFNVLADKFEMKDIVMQSSDFLPNDAPCVQWNYVRTSLLQLWPAKPESFTLMSLKFFAGDEFSLFDAFPVTAEKRVLRAKNCLLKGSPEPEAAPTTKILSTPKTARNELLNWYSSKFDGNIFEIKESQLKALNKAENKKLLSLYKDNIKALTFLLKNGFDPNTITEEKVFVEKLERTSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS6</accession>
    <name>A0ABV2ALS6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA polymerase zeta catalytic subunit</fullName>
            <ecNumber evidence="2">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002289</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA polymerase type-B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000781">
        <property type="protein sequence ID" value="MES1920636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.690">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1600.10">
        <property type="entry name" value="Palm domain of DNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006172">
        <property type="entry name" value="DNA-dir_DNA_pol_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006133">
        <property type="entry name" value="DNA-dir_DNA_pol_B_exonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006134">
        <property type="entry name" value="DNA-dir_DNA_pol_B_multi_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023211">
        <property type="entry name" value="DNA_pol_palm_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030559">
        <property type="entry name" value="PolZ_Rev3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45812">
        <property type="entry name" value="DNA POLYMERASE ZETA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45812:SF1">
        <property type="entry name" value="DNA POLYMERASE ZETA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00136">
        <property type="entry name" value="DNA_pol_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03104">
        <property type="entry name" value="DNA_pol_B_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00106">
        <property type="entry name" value="DNAPOLB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00486">
        <property type="entry name" value="POLBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA-directed DNA polymerase family B exonuclease" evidence="10">
        <location>
            <begin position="13"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="DNA-directed DNA polymerase family B multifunctional" evidence="9">
        <location>
            <begin position="235"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="433" mass="49802" checksum="98E980BCF1922384" modified="2025-10-08" version="1" fragment="single">MSLAYIELMASTTNEKFSDPDKDKILTICVLIKSENNFELNVIATNDDFRLDVNEFYPHKMALILKFCDNEEQIIEEFCDLIRKKDIDILAGFEIQKKSIGFLLDRIIKAYGKNSHVFCRNFDSDNRKLLNVLAQFDSKIVCFEKFGRIFLNIWQVCRSELSLRSYTIQNVYFDLFSETFPSLNDQILFANFCKGGFAKSRAISYVAKKCLLSHQILENLFIIERTCEKANIYGITFANVLNRGSQYRVQSMLARISKIGVYQLLSPSRKMTMSQNTPTSIPLVLEPEKGFIKDPIIVLDFRSLYPSIIIAYNLCYSTCLGKLHFDSNFHSKKFGVTSKTNFKKVDKKDLFLTPNKVVFVKHQKRFGLLPALLLELLQTRIGIKEKMKKSDKNLEKLLNARQESFKLISNVIYGYTAAGFSGRMPCSELAESI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS7</accession>
    <name>A0ABV2ALS7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002108</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000673">
        <property type="protein sequence ID" value="MES1920439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sushi" evidence="3">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10965" checksum="065A04FB01DB02CD" modified="2025-10-08" version="1">MLMRCNEGFELVGSYQCNDNEWVGSPRCEPSRICEKSINRPPSKSNRTSNKSIGDPLSDSNVTSWIARSCSESKEIFTVIAKSSKIYPISILLFVIIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX0</accession>
    <name>A0ABV2ALX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Ribosomal protein S14, S11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">RPS14</name>
        <name evidence="9" type="ORF">MHBO_002283</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the universal ribosomal protein uS11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000777">
        <property type="protein sequence ID" value="MES1920630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.80">
        <property type="entry name" value="Ribosomal protein S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01310">
        <property type="entry name" value="Ribosomal_uS11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001971">
        <property type="entry name" value="Ribosomal_uS11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019961">
        <property type="entry name" value="Ribosomal_uS11_archaeal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018102">
        <property type="entry name" value="Ribosomal_uS11_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036967">
        <property type="entry name" value="Ribosomal_uS11_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03628">
        <property type="entry name" value="arch_S11P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF007176">
        <property type="entry name" value="PRK09607.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11759">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00411">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002131">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53137">
        <property type="entry name" value="Translational machinery components"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00054">
        <property type="entry name" value="RIBOSOMAL_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="143"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="16384" checksum="94009166B669F071" modified="2025-10-08" version="1">MPAKKQKSKPEEEVKNYGPKNVAIGENVFGIAHIYASFNNTFVHITDVSGKETITKVTGGMKVKADRDESSPYAAMLAAQDAAEKCKQRGITAIHIRLRATGGNRTKTPGPGAQSALRALARSGLKIGRIEDVTPIPTDSTRKKGGRRGRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX9</accession>
    <name>A0ABV2ALX9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002317</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000796">
        <property type="protein sequence ID" value="MES1920668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="2">
        <location>
            <begin position="231"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="1">
        <location>
            <begin position="231"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="30269" checksum="293EABB312F1AD4B" modified="2025-10-08" version="1">MSLNFTTYEQYNKDQNKNLHKNAETEDNAKSISLESAQLIRKHVLKKMARYESLVKETAENNGDPFVYVEKLKKLYDEFQKYHSIAFDIISSSSERHRPVRGAEQELLFKNIAMDQFRRKARDSFPAEEAMSQDFKRVAKGILSSNPRITLKMFAEGYNAVAKRRINFLEMREEELRELFESISGVVLQPNQLNNSYNVLDLNVVCFPFKQNSVCECGLDCDGANGELALGWRTMQCAAELFGKCRMKANCNYLHTKTPYKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY0</accession>
    <name>A0ABV2ALY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATP-binding mismatch repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">PMS1_1</name>
        <name evidence="1" type="ORF">MHBO_002314</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000795">
        <property type="protein sequence ID" value="MES1920665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.20">
        <property type="entry name" value="MutL, C-terminal domain, dimerisation subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.100">
        <property type="entry name" value="MutL, C-terminal domain, regulatory subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038973">
        <property type="entry name" value="MutL/Mlh/Pms-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042120">
        <property type="entry name" value="MutL_C_dimsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042121">
        <property type="entry name" value="MutL_C_regsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037198">
        <property type="entry name" value="MutL_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073:SF52">
        <property type="entry name" value="MISMATCH REPAIR ENDONUCLEASE PMS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118116">
        <property type="entry name" value="DNA mismatch repair protein MutL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16092" checksum="8C37DB12876C8997" modified="2025-10-08" version="1" fragment="single">PIKLNFTEEEKNLIIENRIKFIKKKVCFGFENKKPVSVTTIPLYKNLNFDYFDIKDMCRVLKDGYFTDDFQFKSVKLAIATKACRSAIMVGKALSRKEMLQIVRNLVHLENPWSCPHGRPTICHLKEINSLLDKNKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD9</accession>
    <name>A0ABV2AMD9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RNA-dependent RNA polymerase</fullName>
            <ecNumber evidence="5">2.7.7.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002472</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the RdRP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.48" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000905">
        <property type="protein sequence ID" value="MES1920846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057596">
        <property type="entry name" value="RDRP_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05183">
        <property type="entry name" value="RdRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01360">
        <property type="entry name" value="ZF_MYND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="7">
        <location>
            <begin position="11"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="111"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="380" mass="44936" checksum="07FDE5841DA045D7" modified="2025-10-08" version="1">MSDSLKKEFTCDMCKKPSTSAKICRCKMAIYCDEECQAKHWDKHKKECEKFRHLFNKNSDISSDSSDFADFEIPRDTKTDFDELDIFEYFENSQIDDFCDFETAQTPKISNNEKDIEKPKTQKSPENNNLSVIDEFEDYEKKSNLDAENRFVLNLSDFNEYNFTEGIKKLLLKFKFDESKLIPFPKMRDSWEIKNLDVMPPDGTFMLFERSSLKIDNFLSVTFYADFLPAKCAVREAHFQTLRAKKSDRSAYEHFYRREEKLRRRERKMSRFYSEAISQFLRNGIKVINSFRSDVNGIYRFAGHSNSQIKNNSCYLVKAPSAEIHQTLHSIGNFDEIDDLVKLVKFLRFRKKFALLHMSIRNVHVICNFVYQCKKSEQAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH8</accession>
    <name>A0ABV2AMH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Heat shock protein 70</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002494</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000923">
        <property type="protein sequence ID" value="MES1920876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="HEAT SHOCK PROTEIN 70KDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00301">
        <property type="entry name" value="HEATSHOCK70"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00297">
        <property type="entry name" value="HSP70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00329">
        <property type="entry name" value="HSP70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="283" mass="31028" checksum="8A63F0078301D06B" modified="2025-10-08" version="1" fragment="single">MNFLQNLNKRSFKRVSFKPQQTIVRSPQKHFLRLFSNKIVGIDLGTTNSSVAILEGSKPKIIENSEGQRTTPSVVAFTKDKQKLVGLTARRQSVVNPKNTFYAVKRLIGRKYDDSATQKDKKTVPFQIIPGPNGDAWVKDEFGKKYSPSQVGAFVLEKMKSTAEDYLGESVQKAVITVPAYFNDAQRQATKDAGRIAGLEVSRVINEPTAAAVAYGLDKSNSGKNIAVFDLGGGTFDVSILNCDDGVFEVKATNGNTSLGGEDVDLRLVEYLSAEFKKQHGID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ9</accession>
    <name>A0ABV2AMJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000935">
        <property type="protein sequence ID" value="MES1920893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8806" checksum="BAC60D2621557B58" modified="2025-10-08" version="1">MNSENKKPQIRSNLSHGAEVDEYERIHSEHPYRNDYLNEMVIPDIHLDKLESKIWDERENNDDGFMREYAVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMN0</accession>
    <name>A0ABV2AMN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-ketoacyl-CoA synthase</fullName>
            <ecNumber evidence="3">2.3.1.199</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">KCS2</name>
        <name evidence="3" type="ORF">MHBO_002299</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.199" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000785">
        <property type="protein sequence ID" value="MES1920648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012392">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013601">
        <property type="entry name" value="FAE1_typ3_polyketide_synth"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31561">
        <property type="entry name" value="3-KETOACYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08392">
        <property type="entry name" value="FAE1_CUT1_RppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="FAE" evidence="2">
        <location>
            <begin position="89"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24077" checksum="0D85C53551EF7CED" modified="2025-10-08" version="1">MDKTSMASLRTRLPNFRTEANPRHIRGGYKTLLRNLNICAVLALICCILPALFHPAAMAAYLFSLAKRCCSYYRTIHLLLFTVFALAAVMRRGKRTYLLDFSVYNGEDYMKLTKKRFDWIITHNSCSEESAEFAKRVYSKSRIGDGTMFPPQIMENFPAQIDKQSMADAKFESREVMFKCVSDVLEKAKLQPVQIGFKNCKRRKIFWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR9</accession>
    <name>A0ABV2AMR9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002566</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000985">
        <property type="protein sequence ID" value="MES1920966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="14113" checksum="7853D71EDD99BE32" modified="2025-10-08" version="1">MDTTAIKELKSKHYNVLRQLEYIDGRIFMSFEGYLSLMKVEKLGGIYLVKVFPINFLYNIILENINEEIKLYKEIESPYVVKFHDSFVTDKFHYVLLNFDDGKNLAFEIFNDLYLEHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS2</accession>
    <name>A0ABV2AMS2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Kinetochore protein SPC25</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002337</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the NDC80 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
            <location evidence="1">Centromere</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Chromosome</location>
            <location evidence="9">Centromere</location>
            <location evidence="9">Kinetochore</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the SPC25 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000809">
        <property type="protein sequence ID" value="MES1920693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23784">
        <property type="entry name" value="RWD_Spc25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.50">
        <property type="entry name" value="Chromosome segregation protein Spc25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045143">
        <property type="entry name" value="Spc25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013255">
        <property type="entry name" value="Spc25_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14281:SF0">
        <property type="entry name" value="KINETOCHORE PROTEIN SPC25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14281">
        <property type="entry name" value="KINETOCHORE PROTEIN SPC25-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08234">
        <property type="entry name" value="Spindle_Spc25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4 9" id="KW-0132">Cell division</keyword>
    <keyword evidence="8 9" id="KW-0137">Centromere</keyword>
    <keyword evidence="3 9" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-0995">Kinetochore</keyword>
    <keyword evidence="5 9" id="KW-0498">Mitosis</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chromosome segregation protein Spc25 C-terminal" evidence="10">
        <location>
            <begin position="142"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU367150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="200" mass="23647" checksum="64DBFF2CF0988635" modified="2025-10-08" version="1">MAHIKSNIRPIQKEFEYTTKLFENTEKANELSKKILTNLYKENLELNQELILKNREAKNEKMHVYKLSSELESMQKVCEELPSVIKALSAENMASKENLNSQIRQLEMTKSLNDQKIKNLRNKINLREKLLGVRFEPIQYGVKIVLFNLLENNPNYECNFRLKIENGYKITDCNPKIDFADELKKFCQTEDFKLFMKVFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN12</accession>
    <name>A0ABV2AN12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002656</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001057">
        <property type="protein sequence ID" value="MES1921058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18869" checksum="2FD9DC1C70E42176" modified="2025-10-08" version="1">MVDLYKKFVTKNVLPLFEETEFAVQKEPNFRVCFPDNTAIGETGKEQSDKIGLHKDSDYGHPTGEINFIVALTDIFDSNGLFFETFPKSNKFVPLKMGYGQFFQFYGNQCRHYNLLNVTKNTRVSLDFRVVPMSVYDEFNLEKSVHSGRKFVIGDYYVKMIAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN36</accession>
    <name>A0ABV2AN36_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002669</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001067">
        <property type="protein sequence ID" value="MES1921079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15571">
        <property type="entry name" value="ePHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034732">
        <property type="entry name" value="EPHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050701">
        <property type="entry name" value="Histone_Mod_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793:SF107">
        <property type="entry name" value="BROMODOMAIN-CONTAINING PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793">
        <property type="entry name" value="PHD FINGER PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13832">
        <property type="entry name" value="zf-HC5HC2H_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51805">
        <property type="entry name" value="EPHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="4">
        <location>
            <begin position="77"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="383" mass="44743" checksum="342EC9B51C2A0175" modified="2025-10-08" version="1">MFENGCTTGKTRNKDLEKRCAICLSEIECPSLLECRKCRVELHKQCLVLAKFDCKVGRNGHFDKFVCSNCDSKNIFTPKCVVCPISTGFFIRCEENRFIHLSCALWIPEIHIANKINRKVVGINDVPFERYQLLCFYCKNSYGACIQCASPNCSISFHPSCSFRNKNRFIIKDKNFQIWSNTDFGSEILAEKFLAFCHKHNNENVLNVEKQTDFLFFRRTINYRESPNSSNSRTFIANKKKLEKPKIFLPLIWKNLESFFDNRLIIPILRLLNCSPKIDLSFAIPGQPLRRSVKMRILENFVKMPSFLGYREKMAIGISTDLSFCRIFRFLENFFCKSNSSIDEKKCVCEQCRNLNDSFADFINDFDEFEVCEKKKKKWAFSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN52</accession>
    <name>A0ABV2AN52_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FATC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002666</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001064">
        <property type="protein sequence ID" value="MES1921072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050517">
        <property type="entry name" value="DDR_Repair_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003152">
        <property type="entry name" value="FATC_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139">
        <property type="entry name" value="ATAXIA TELANGIECTASIA MUTATED ATM -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139:SF9">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02260">
        <property type="entry name" value="FATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01343">
        <property type="entry name" value="FATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51190">
        <property type="entry name" value="FATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FATC" evidence="1">
        <location>
            <begin position="43"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8529" checksum="A1F022B1D2C4CB04" modified="2025-10-08" version="1">MSLLPIASRRAKSSEKDSCEINLMALKIMKRISAKLSGTEFGEFMNEKQQVNELILQATSVKNLSQCYVGWCPFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND7</accession>
    <name>A0ABV2AND7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002749</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001129">
        <property type="protein sequence ID" value="MES1921180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9363" checksum="40AB7A296C0B84D2" modified="2025-10-08" version="1">MTRRVSLRLLSELHRRSKSGLHGISEVSVNTTCHTMLNGKVEIIDKKFLGSTLSQTGRVSKKQWRELMVSQPNRLFHAMKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANF5</accession>
    <name>A0ABV2ANF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002738</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001120">
        <property type="protein sequence ID" value="MES1921168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="10389" checksum="B30386D7F5128F0B" modified="2025-10-08" version="1">MQANQPVGTTQNYHVVHFHHEDAMYDSKHLWSYFAIQMTWYFTKEKIKYSFMAKQMFTSLDFKIEFFKICAIKKSIRLVISWKATP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP7</accession>
    <name>A0ABV2ANP7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002837</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001217">
        <property type="protein sequence ID" value="MES1921287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="89" mass="10012" checksum="55DA376B0CBB1329" modified="2025-10-08" version="1" fragment="single">AVARVSDCSHTFCWNCLVVLKDSSESIGYDVKCVPKCTSWLTRDTVQRFLQEYDNSKNHVSFRCPPILPLCGYKLNTTGTPVSKLINVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP19</accession>
    <name>A0ABV2AP19_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Lipoyl-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002953</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001338">
        <property type="protein sequence ID" value="MES1921420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06849">
        <property type="entry name" value="lipoyl_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050537">
        <property type="entry name" value="2-oxoacid_dehydrogenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43416:SF5">
        <property type="entry name" value="DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43416">
        <property type="entry name" value="DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="Single hybrid motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="5">
        <location>
            <begin position="31"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="142"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21232" checksum="32A5334B51F8ABB5" modified="2025-10-08" version="1" fragment="single">MVRSRIVKNAISFRLLQLNSLRLRQIRFFAKKTVNVPFMGDSITEGKLIEFSKSPGEAVEEDELVAVVETDKTSLEIRSPEKGVIEKFFRKIDENVEVNTPLFEIDTATTTKTSLKTKGTENKTEKQKEIFVKKTEKIKETSKKVEKLTDSPKVEKTEQTKKVGNRNETSIPLSRMRLKIAERLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP55</accession>
    <name>A0ABV2AP55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Nucleoporin Nup54 alpha-helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002994</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001373">
        <property type="protein sequence ID" value="MES1921460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024864">
        <property type="entry name" value="Nup54/Nup57/Nup44"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025712">
        <property type="entry name" value="Nup54_alpha-helical_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13000">
        <property type="entry name" value="NUCLEOPORIN P54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13000:SF0">
        <property type="entry name" value="NUCLEOPORIN P54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13874">
        <property type="entry name" value="Nup54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Nucleoporin Nup54 alpha-helical" evidence="5">
        <location>
            <begin position="58"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="229"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="29909" checksum="B5B5567ED6B11D8B" modified="2025-10-08" version="1">MMAEINNMYSKEQNQLSGIMTALKHLFRRINPTSPNNLFQAVLYDNKPTPDGQEFLCPPNADVIKWQEGVSTNPDDTRLTAIHIDSFASLKERVALQNTFKKIFAEKALKMQSEINAFEQNQLFSVDSPLKELISSFSDLSPRLIRAIAQKERLYSKVNLNGFDPEEDLKNLFNRTNNLKLQSVGLIERLDKLNENLEMAEKKDLVQQKSLDESEEFDETDFEIMFNALKSYQTRLDRVEQNIDQIADELDLKIAKKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP99</accession>
    <name>A0ABV2AP99_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copine-3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CPNE3_1</name>
        <name evidence="2" type="ORF">MHBO_003034</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001427">
        <property type="protein sequence ID" value="MES1921507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045052">
        <property type="entry name" value="Copine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010734">
        <property type="entry name" value="Copine_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857:SF106">
        <property type="entry name" value="C2 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857">
        <property type="entry name" value="COPINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07002">
        <property type="entry name" value="Copine"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Copine C-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="22952" checksum="B184F548A7462AE5" modified="2025-10-08" version="1">MESQCFSLTFDPQKPFVESTEEAIEFYNSAVKRRQVGQCGRKIIGEVLNTIKMVSDRQVRAGKACYDILFLMFSNGSFVDRSNLANLLVEISVKPISFVFIGMGPGDFEEYKFLNKLKLKSSSGKKSFRDNASFFNFRDIVEGHTPDKTRTVLFSHIDRRIRQQVLEYFHNKKLSPENIFEGTESDRYQDNFNFNHVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APA2</accession>
    <name>A0ABV2APA2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001429">
        <property type="protein sequence ID" value="MES1921508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13457" checksum="F72A31E2EC6353AF" modified="2025-10-08" version="1">MEVVKLQIEKKFGKANASVLDRVRIGSIDSTPFRKTEDRIRQKIGIHINNDCAKNLGLPFHTEWVFTTQDRITEMEKRIEEAKVKNEFDTIDIFKTPFLELSQLPEGVEKLLLKAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APD2</accession>
    <name>A0ABV2APD2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003064</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the DP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001459">
        <property type="protein sequence ID" value="MES1921537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004345">
        <property type="entry name" value="TB2_DP1_HVA22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12300">
        <property type="entry name" value="HVA22-LIKE PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12300:SF161">
        <property type="entry name" value="RECEPTOR EXPRESSION-ENHANCING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03134">
        <property type="entry name" value="TB2_DP1_HVA22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="23"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="78"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="24024" checksum="4F8EEB1CBB4D8DCA" modified="2025-10-08" version="1">MSSKINKVEQTTKSEKINENPNVAKRVAVISFLLFCTAGTITGYLTNLFTSFVTGIVPVVKSIKLLQNYDTEKTKKILYYWIVYVLFTIIETNFDWKTRPFLVVNMAKICFFLLLMRDDFKYSEKFYRNTILPMYKKNEKRIIDFATILQEELENLREDISFFVREKIFSKKIAKTDLKEDEKTEKRKTVEKKGFLGIKRKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK5</accession>
    <name>A0ABV2APK5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002993</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001372">
        <property type="protein sequence ID" value="MES1921459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24409:SF295">
        <property type="entry name" value="AZ2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24409">
        <property type="entry name" value="ZINC FINGER PROTEIN 142"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13894">
        <property type="entry name" value="zf-C2H2_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="13"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="69"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="123"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="150"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="27455" checksum="E4166844B691EF23" modified="2025-10-08" version="1">MQVHIPLHEKPICRCETCGKIFRSKKSLSGHRVVHSKRSPFLCDICERGFVSRRNLRNHQKGHLSGSNYRCDVCDVYFRSSANLAVHRAKSHFDPKYTSFPKVISEMAFKIENSLNSVEKIVYPCEQCERSFTNKVLWVDHMQKHFSDQHRCICFICGHSNASLEDLKSHLEAHSSDVPPPPSISPPKTTLSNYDAKYFISFFASNGIELRPTVKMPVKAFEQIPPPPPVENVAMLKKRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT7</accession>
    <name>A0ABV2APT7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003209</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001623">
        <property type="protein sequence ID" value="MES1921678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00033">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046318087" evidence="2">
        <location>
            <begin position="18"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18073" checksum="1AE5DDF1A62FF301" modified="2025-10-08" version="1">MPSFVIFLLATTQLNQSQRTCPRPTIKFPAYYTNYCGGLFPGQTCGVGCVTGYSLVGASKLRCNENYLFDIFHGCNISPVIAEGCLTPLIQFGWWNGGCTNKMINQTCELNCYDGHITTAKNDVAITKYTILCQNDLTFNKSINCIRHTGFFSHFSLFEDTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU5</accession>
    <name>A0ABV2APU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphomevalonate kinase</fullName>
            <ecNumber evidence="6">2.7.4.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ERG8_3</name>
        <name evidence="6" type="ORF">MHBO_003211</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via mevalonate pathway.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.2" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010001624">
        <property type="protein sequence ID" value="MES1921680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004631">
        <property type="term" value="F:phosphomevalonate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="entry name" value="GHMP kinase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035102">
        <property type="entry name" value="Phosphomevalonate_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31814">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31814:SF2">
        <property type="entry name" value="PHOSPHOMEVALONATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="GHMP Kinase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21557" checksum="2E75F6202385EED3" modified="2025-10-08" version="1" fragment="single">YNFLSLNFDKQKKLLINKNPIENSIKFRFPKNLDIIMGQTEEGSKTTELVEKVLEWRKNQKNDLFWGKIFDCVKIIFQNFQKNPNFANTTNEIKSAFLKMRSLYKKMGILSGVEIEPDSQTKLLDETDKIEGVIGSCVPGAGGYDAIVAIILNDVNTRKNVEKLWTSNNIKILKVGIEKSEGISFDDIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV0</accession>
    <name>A0ABV2APV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DksA C4-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003223</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001638">
        <property type="protein sequence ID" value="MES1921693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="89" mass="10141" checksum="643ABC848BC40A5D" modified="2025-10-08" version="1">MRTMENSRVFLNVASVGACAVDELIQMSSGRIYIRPIQRSLPIDETKKTLVSSDYEECHNCGSLINLENLRDHGKECRVCFKQYLKSEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE3</accession>
    <name>A0ABV2AQE3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003421</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001905">
        <property type="protein sequence ID" value="MES1921890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00033">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00084">
        <property type="entry name" value="Sushi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045335290" description="Sushi domain-containing protein" evidence="2">
        <location>
            <begin position="21"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="3">
        <location>
            <begin position="224"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="31325" checksum="27A976D3C23658B9" modified="2025-10-08" version="1">MSEIFLIFLVLKLYLSATCGINPDEYMDMNIDSPTREEGQYLQFTCKDGYFLLYKDPIICKDGVLTVNGKPFKNPCKAKSNYCKALPNSNVRNNNVDIIATLACDDGYQYNNKMFTGIDLKCTPDVENVNQGVWKDENLMVYGDVCKPESNYCSQDVNLNKNVIADFPSKRIINSITKVKCADFYTPRLNKINYKNITFRCIKNRRWEYDGYQIINLFCVPKKYVCPEIKINPISESRILTRERSIGSTIRFVCNPGYSRPRNPATCGSTGQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF7</accession>
    <name>A0ABV2AQF7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Kinesin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003183</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001591">
        <property type="protein sequence ID" value="MES1921653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027640">
        <property type="entry name" value="Kinesin-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001752">
        <property type="entry name" value="Kinesin_motor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47968">
        <property type="entry name" value="CENTROMERE PROTEIN E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47968:SF75">
        <property type="entry name" value="CENTROMERE-ASSOCIATED PROTEIN E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00225">
        <property type="entry name" value="Kinesin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00129">
        <property type="entry name" value="KISc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50067">
        <property type="entry name" value="KINESIN_MOTOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 3" id="KW-0505">Motor protein</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinesin motor" evidence="4">
        <location>
            <begin position="6"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="98"/>
            <end position="105"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15443" checksum="8958C803E3B6200F" modified="2025-10-08" version="1">MSNKYSISVAVRVKPFLSGSKETKSTVDIAHKQIVNFDIGDTSRPLGSIGKRRKKNQHYAFDCVFSPEDSTKTVYDKMAKSAVIDALNGYNATIFAYGATGSGKTHTMIGNSRGGPGIIVLAMYDIYTVIEKRFDECAFNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ2</accession>
    <name>A0ABV2AQJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003447</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001940">
        <property type="protein sequence ID" value="MES1921919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6173" checksum="9030DA933CD11F37" modified="2025-10-08" version="1">MGHKRSTLAGKWRSGMLRREKGVAGKERTISLYANDQLEYIPKGSEMFLPMCRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN0</accession>
    <name>A0ABV2AQN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003468</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001971">
        <property type="protein sequence ID" value="MES1921942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036278">
        <property type="entry name" value="Sialidase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50939">
        <property type="entry name" value="Sialidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="12234" checksum="FDC23E250F801D82" modified="2025-10-08" version="1" fragment="single">MSDNGKYVYLGSNDDLGVSTKNGASGTYIRTLHVDENSDPSGTNIYSQGEIIALCCSSSGRNVFVVVGNQNTNKDFKIARSYDYGSTWTVSNNFNVGTLSFKSIQIATDLTGAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP7</accession>
    <name>A0ABV2AQP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003482</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001987">
        <property type="protein sequence ID" value="MES1921957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29676" checksum="54C144936312DFD3" modified="2025-10-08" version="1">MIVLDESFNRFQDGLLKKKQAHLHAKSRCLSSMITGPSNFPTRRNQKALNSEHNRLEEFISYFDKGVKIIKRNVKNALSGDELKKEQKAVEEESYNYIIRQAVSVIADAVQWGRHNTLLKSALQRKIVNKLSHNGELMEKAVNEINEASKENTGKNMFTKRHSIFKIIEQAKAPKVEPEVKEDKVLFENDLYRLEIHYSDERYRFFFDGKPSDEIRNVMKSNGFKWSPRACAWQRKNTYNGKLATEVVMSHLNNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS6</accession>
    <name>A0ABV2AQS6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATXR3 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003538</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002087">
        <property type="protein sequence ID" value="MES1922020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045606">
        <property type="entry name" value="ATXR3_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46655">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46655:SF1">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19633">
        <property type="entry name" value="SDG2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATXR3 C-terminal" evidence="1">
        <location>
            <begin position="5"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="26572" checksum="500E5B4D548381B9" modified="2025-10-08" version="1" fragment="single">NQSRKPPLTFSSPSKIIRRLWSDGDSLVNTILSITSQYLTKAKIYRLHEIKKSVDFVDGTLKCLDTVRAKLLQISEILKNVKDEKNICNSACSDLIIMYARTKYYFHSNDYIPFKSAFAEIGLTINKESKCAVGQTCYSSDYPLSLLLSWFKDAVDANFSSLLLKGVIYLPDVKSCYLEEGEKISPIYRKERLLANFEENFDLAKFSSFLSKESHFTFFNHFGFMGSPFFDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT8</accession>
    <name>A0ABV2AQT8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003256</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001683">
        <property type="protein sequence ID" value="MES1921727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="23188" checksum="D203E6DD3DC96724" modified="2025-10-08" version="1" fragment="single">NLKTLKTPSKVVDLCFNKDDSLIFVLMKRNQFLAISTKDFKATNYFLKYKNRIKSILHNFQQFSKLQLSPNNKDGFFAYNDKMIVKIDMSKFPPPPPTKLNFSQTNLSQKFEPIFEEKNLINGVKRKNGEYFNDESSNLFSENDDGSFDMDNFQIERNFKPVYFTALNDFERIVVEQDAVALSKDLPSTLYKHKYGTGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW7</accession>
    <name>A0ABV2AQW7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003401</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001873">
        <property type="protein sequence ID" value="MES1921866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1110.10">
        <property type="entry name" value="RNA polymerase Rpb2, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007644">
        <property type="entry name" value="RNA_pol_bsu_protrusion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037034">
        <property type="entry name" value="RNA_pol_Rpb2_2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04563">
        <property type="entry name" value="RNA_pol_Rpb2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase beta subunit protrusion" evidence="7">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="25021" checksum="6ED18FE51228ACFA" modified="2025-10-08" version="1">MIKSKSCSLRKFSRQQLIDAREEEFENGGYFVVNGRERIIRLLMVSRRNFPIAIIRKSIKTRDKTFTKYVVFVRSVREDCFASKLFAHFLTDGGVMIGFSVGRKRITVPVVLILKCLSGFSDKAIFSELMSDCSDADFSLFSDKVDFLLRDFSKHGFVDKKSCLRHLGEMVSDLNFYQNERDNEKIGKMVLEDCILVHCFDEKFLGKQNILKIYGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY5</accession>
    <name>A0ABV2AQY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003303</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001747">
        <property type="protein sequence ID" value="MES1921772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="104"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="124"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="144"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="156"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="24821" checksum="1CF567D25192046C" modified="2025-10-08" version="1">MHACASVISRSIKSVYPPVNGILDLSVSILNTVFPPRGLKSRHTVTLLWFNCSLSHIPGKWSPNHFVPLLSNDQNVPVVDLTSELDFPPLAKSNSKSCPVKSASVPNQTSSSQNSGVSKPDLNSGPSSSFSPISSPVKSASVPNKNSSPQAITVDSSPQASPPLSLNPPSSSSELHEITSVSCISSSDIPLDVPYSNPPSHSLHGKFLENKTVSELVKERKEVFQRWFQRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE0</accession>
    <name>A0ABV2ARE0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003551</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002114">
        <property type="protein sequence ID" value="MES1922034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="12"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16809" checksum="D45A80E7E76DE396" modified="2025-10-08" version="1">MLIEIVNGWQSLRKLNEKIDHLENIVSGLESLQQKQEKYARQMKNLLQEQRQLGREQERKIKGMEEFVRNQTMCACDQRSLMKTQKQNKEKEKEILIPLQERDILKDTNTRRETRNFYKRVARETRSVSSQGMLFYYIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF9</accession>
    <name>A0ABV2ARF9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">SRP54-type proteins GTP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003582</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Endomembrane system</location>
            <topology evidence="6">Peripheral membrane protein</topology>
            <orientation evidence="6">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GTP-binding SRP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002162">
        <property type="protein sequence ID" value="MES1922064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.140">
        <property type="entry name" value="Signal recognition particle SRP54, nucleotide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036225">
        <property type="entry name" value="SRP/SRP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
        <property type="entry name" value="SRP54_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43134">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43134:SF1">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47364">
        <property type="entry name" value="Domain of the SRP/SRP receptor G-proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00300">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0675">Receptor</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SRP54-type proteins GTP-binding" evidence="8">
        <location>
            <begin position="341"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="368" mass="40640" checksum="71B4B38B580C76B7" modified="2025-10-08" version="1" fragment="single">TKQKKEKEKRTWKDKKLSKNELKALDRSSDKNSSILSPQNSDFSSSAQQTAEKNLESSSEDDIPAHNNNSLGAKLGGLFGKLSHKQLDERSIKSSIDQIERILIDRNVAVEIARAVCDSVKSDLLGKSVSRMALTAPIVKDAFREALVRIVTPSREVHILKEISNSIRLGKPYAIAFVGVNGVGKSTTLSKIANYLRKRGLQVSIAACDTFRSGAVEQLLTHAKALKLRLFHKGYAKDSSRVCAEAIKEARRKSDDAVLIDTAGRMQNNEPLMRSLRKLYETNRPDLVLFVGEALVGNEALSQLEKFNEHVPIDGIVLTKFDAVDEKVGAAISMTHRTKFPIVFLGTGQKYEDLKRVDAGSLVNTLLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG8</accession>
    <name>A0ABV2ARG8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA sliding clamp PCNA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003773</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processivity during elongation of the leading strand.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the PCNA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002490">
        <property type="protein sequence ID" value="MES1922265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00577">
        <property type="entry name" value="PCNA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.70.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046938">
        <property type="entry name" value="DNA_clamp_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000730">
        <property type="entry name" value="Pr_cel_nuc_antig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022649">
        <property type="entry name" value="Pr_cel_nuc_antig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022648">
        <property type="entry name" value="Pr_cel_nuc_antig_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00590">
        <property type="entry name" value="pcna"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11352">
        <property type="entry name" value="PROLIFERATING CELL NUCLEAR ANTIGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11352:SF0">
        <property type="entry name" value="PROLIFERATING CELL NUCLEAR ANTIGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02747">
        <property type="entry name" value="PCNA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00705">
        <property type="entry name" value="PCNA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00339">
        <property type="entry name" value="PCNACYCLIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55979">
        <property type="entry name" value="DNA clamp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proliferating cell nuclear antigen PCNA N-terminal" evidence="5">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="Proliferating cell nuclear antigen PCNA C-terminal" evidence="6">
        <location>
            <begin position="90"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="26341" checksum="E16BB964167EF1B9" modified="2025-10-08" version="1">MDSSHVAVVSFSIKAENFEHYRVDRNFSLGVDTRMISKILRRLDNNNILTLRADESADTVNFCIQSTENDKEQYSFDIKKLNIDSERLNIPEKDYDCNININSSDFARVCQDLSNLDETVTLSADGKGVVFEVSGEAGSGKIEMRQSGDEGTTKRMKIVMNEDTKTLSQKYALSYLLSFVKASSLANDVTLCISENTPLLVEYEIDDFGFLRFYLAPKVFEEDDDGEEETPNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS22</accession>
    <name>A0ABV2AS22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tr-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003798</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002527">
        <property type="protein sequence ID" value="MES1922289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908:SF6">
        <property type="entry name" value="116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908">
        <property type="entry name" value="TRANSLATION ELONGATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="1">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15553" checksum="B1D8DBB4D0040048" modified="2025-10-08" version="1">MDTPGHVNFSDEQTAALRISDGAVIFIDVVEGVMKQTIRSIKHSIENGVPIVVVMTKMDRLILELKLPPKDSYHKLFGIFKEINDLLTNLKYPAQISPERGNVCFSSALFGWSFTLDSLSRKYQDRNGLLQFFDNLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS78</accession>
    <name>A0ABV2AS78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002962">
        <property type="protein sequence ID" value="MES1922497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10516" checksum="42F9C48C46F7238B" modified="2025-10-08" version="1">MVALTQYRKTIKGLPKIDYKADYKNINIAAEDLVSLSIFGKSENRLLDFHRYFNIENKKVVLTPFDTENSETSFLRHNLRIKTIHGMQNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS83</accession>
    <name>A0ABV2AS83_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004044</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003027">
        <property type="protein sequence ID" value="MES1922531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="37"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="223"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="29727" checksum="5A348FA4D0F398AE" modified="2025-10-08" version="1" fragment="single">SINKQEIELKSEQKSHSLTKKESERNYEKLNSTFKKIDDLQNQLFEEKIANNNLKTELGETKSNLKSLKNQKSPNFHNENATEKQIEKLRNENFKLKETKNRLNFKLEKLEKENKNIQNYFKQNNRIDDKNNQNENSFESFLKSEILTFKEKLAAETNEKNVLKKKISELKSAENAKLDKDDKMKSELKKAKEKLDKMGKFGNDNNFKNEQTLKLEKRIKALVDKNKREKMFYEKRVEKLESLSKDKNQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE9</accession>
    <name>A0ABV2ASE9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cold-shock domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003883</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002688">
        <property type="protein sequence ID" value="MES1922376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cold-shock" evidence="1">
        <location>
            <begin position="6"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13832" checksum="62110F836FE2D609" modified="2025-10-08" version="1">MTKSEEGKILWYSKLKKKGFIETGEGEEIFLSEIAFKNSFDKSKIRKDAKVSFEIGLSKRGNKYAKNVRILENRNMCNEPLKSEDMFLGFEEYMTKEDKIWKMVAAIVFNYGDFDFVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF7</accession>
    <name>A0ABV2ASF7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ribose-5-phosphate isomerase</fullName>
            <ecNumber evidence="3">5.3.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Phosphoriboisomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003921</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ribose 5-phosphate isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.6" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010002743">
        <property type="protein sequence ID" value="MES1922409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004788">
        <property type="entry name" value="Ribose5P_isomerase_type_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11934">
        <property type="entry name" value="RIBOSE-5-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11934:SF0">
        <property type="entry name" value="RIBOSE-5-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06026">
        <property type="entry name" value="Rib_5-P_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75445">
        <property type="entry name" value="D-ribose-5-phosphate isomerase (RpiA), lid domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011959"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="21980" checksum="680ACD9CCFEFE6C5" modified="2025-10-08" version="1" fragment="single">LLIPLLKDLKDKIFIPSSAQSEELLIKNGLKVGCLNQHPLIDVTLDGVDSIFVEENVVFKGKGGCFLMEKVLIANSKKTILVGTSDKIIKKSDLSKFSISIEILPKCLNSCQNFIKSNFDVQNMKTRQSEKNKIGYVVSDNANFIVDVEFQQTFDKFDQFLKFVENLEMKLNQVPGVFGTGIFLDMVDIFVTGDCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI4</accession>
    <name>A0ABV2ASI4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Histone-lysine N-methyltransferase setd3</fullName>
            <ecNumber evidence="4">2.1.1.354</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SETD3</name>
        <name evidence="4" type="ORF">MHBO_004157</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.354" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010003299">
        <property type="protein sequence ID" value="MES1922638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140999">
        <property type="term" value="F:histone H3K4 trimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1410.10">
        <property type="entry name" value="set domain protein methyltransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050600">
        <property type="entry name" value="SETD3_SETD6_MTase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13271:SF47">
        <property type="entry name" value="ACTIN-HISTIDINE N-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13271">
        <property type="entry name" value="UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="27426" checksum="5AE415FF1615AF05" modified="2025-10-08" version="1">MPPLVMKDFFWALSVVMSRQNLLPGIGYSLIPIWDFCNHKNGEITSSFSDGNCESFAIKDFRRGEEIHICYGERPNYKLFLYSGFVLDGLLPFDSVPFSIDVMFEDDNILLRANKKKNAEKYLAVTTGTVLVHNVEESVQKSQLVKELWYQNILGVCRVATASKEEMKIMWQKNNLMEPLSPENEAKSVERLIKVISNHVGKLQSVDCESAFAANGQRAQIVSSMLQLELALFNRFMAKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM6</accession>
    <name>A0ABV2ASM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003966</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002854">
        <property type="protein sequence ID" value="MES1922451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25912" checksum="9CA6036ECE32BCA3" modified="2025-10-08" version="1" fragment="single">MSGMKRPGMVAYNAVNRTIVETMHELAFALLPSKEIDAKNCKDPRAIMACKTLEITFMARRKYSYQKYSPTDTFNLIRNILEELEPDETTPKKDMCTVYYILETLYPVSEDFTKQQEKLKTELDKIQDLEIREELRNLNARTLSGDGVRESLGHLLEQKVFNIGEKCPIYLKQQICDLLIEIETTDYDQNDDEIETTVSDQNDVEIETTTELAKFKSIQNCLSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV2</accession>
    <name>A0ABV2ASV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003977</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002881">
        <property type="protein sequence ID" value="MES1922462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="11028" checksum="F48EE2B95D300ADF" modified="2025-10-08" version="1">MTISRYKTQQRLVSPALEVKAMRPSDMTLKAARKITLIMALRVMVKNVRLRRKCCAFPRSVYCDGLWLVTISTFQIKWFSFCKALLRCVPISDLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV9</accession>
    <name>A0ABV2ASV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004286</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003625">
        <property type="protein sequence ID" value="MES1922765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002015">
        <property type="entry name" value="Proteasome/cyclosome_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943:SF2">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01851">
        <property type="entry name" value="PC_rep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="20332" checksum="38BBB5709A5D8488" modified="2025-10-08" version="1" fragment="single">ACLGIGSATIGFNDDSLNDSLKEVLFKDNCIASQSAAIAIGLNSTGNNNSPIAREMLEYAHQTKHEKIVRGIVIGVALTCLSAQDKCDPLINEMLSDENEIIRYGGCFALGLAFAGNEDMAALKKLLEIAAGDISGDVRRAAIMSIAFVLCRVPKKVPGFVRLFAESFNPHSRYGAAMAIGIACAGTSMDVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY0</accession>
    <name>A0ABV2ASY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004279</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003603">
        <property type="protein sequence ID" value="MES1922757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15958" checksum="21330419AB110C27" modified="2025-10-08" version="1">MARWPPQISQERQKAQKDLLDNAGMLSIHLRDPVSNDGTRFLLQFGVGEETIESKLVDVNDGKPFSDHLKLNITNTDGSIKVRMFTKGLFGRKEIGRGDVVIDEMPNELRANFFEGRDVAIFVNFDGKGARVTYNFQKIDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY3</accession>
    <name>A0ABV2ASY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">E3 ubiquitin-protein ligase rnf38</fullName>
            <ecNumber evidence="7">2.3.2.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RNF38</name>
        <name evidence="7" type="ORF">MHBO_004010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010002954">
        <property type="protein sequence ID" value="MES1922492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051834">
        <property type="entry name" value="RING_finger_E3_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931:SF3">
        <property type="entry name" value="RING ZINC FINGER-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931">
        <property type="entry name" value="SI:CH211-59O9.10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="205"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="16"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="34"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="270" mass="30534" checksum="96464750FD43F160" modified="2025-10-08" version="1">MNFFNAPSPPDLNSRPLSNPQPISSQNSPFPNSMIFQFSSTRNQNNPTPSNAQFQNNPTSSNAQFQNNPTSSNAQYQSHPSGQSFFRQTTFSSPSGAPISYSISTRNFGGPIQTTNSTTSTGVHPDFYELFNTVFNQRTDGNNRNNEFSFPNLFEGNFERIFEYFRSVGARDGNQMQPATEHDIENLPSFVVDKKMAESLTSQKCVFCMEQMVEKEEVRRLPCLHVFHKKEIDQWLKINKVCPVCKAAIDSSDRSQEQQRGQGQTGQRQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT18</accession>
    <name>A0ABV2AT18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004351</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003825">
        <property type="protein sequence ID" value="MES1922825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10131" checksum="43D76B166CD2A80C" modified="2025-10-08" version="1">MIELSKVEDQLAEVKADFSQKIKPLKERSKDLIQTLKHGSINVTERVYLMDDQDNNLMGYYNDRGILVHTRPLKAEERQLKIMSIAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT58</accession>
    <name>A0ABV2AT58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">peptidylprolyl isomerase</fullName>
            <ecNumber evidence="2 5">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">FPR1</name>
        <name evidence="7" type="ORF">MHBO_004387</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2 5"/>
    <dbReference type="EMBL" id="JBDODL010003907">
        <property type="protein sequence ID" value="MES1922858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050689">
        <property type="entry name" value="FKBP-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10516:SF443">
        <property type="entry name" value="FK506-BINDING PROTEIN 59-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10516">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54534">
        <property type="entry name" value="FKBP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase FKBP-type" evidence="6">
        <location>
            <begin position="44"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16229" checksum="80325987D6E6525D" modified="2025-10-08" version="1">MIRRLKNARSLLFNKRCFATNSNSEGLKIETLIGGDDKSYPQKGNIVDVHYEAYLENGTMFDSSRKREEPFRFEVGQGIVIPGLDKAILRLSLGQRAVLTIPSNMGYGTQSVKRVIPKNSTLIFDLELLKIEQFRAKQIIHNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF1</accession>
    <name>A0ABV2ATF1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">30S ribosomal protein S16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004469</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bS16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004094">
        <property type="protein sequence ID" value="MES1922938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00385">
        <property type="entry name" value="Ribosomal_bS16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000307">
        <property type="entry name" value="Ribosomal_bS16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023803">
        <property type="entry name" value="Ribosomal_bS16_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00002">
        <property type="entry name" value="S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12919">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12919:SF20">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN BS16M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00886">
        <property type="entry name" value="Ribosomal_S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54565">
        <property type="entry name" value="Ribosomal protein S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="76"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="106" mass="12109" checksum="59B3C257E648107E" modified="2025-10-08" version="1">MAVVIRLSRRGNKHKPFYRIVVAKSTSPVKGKCIENVGTYNSIQNKDGFKELRIVEDRIKYWLAVGAKLSSTVHKLLSNAGILHELLYVIYLMFCIIKFGQWNGLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK6</accession>
    <name>A0ABV2ATK6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004242</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003500">
        <property type="protein sequence ID" value="MES1922717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="2">
        <location>
            <begin position="40"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="1">
        <location>
            <begin position="40"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="17995" checksum="504B7E80A8DF3B8A" modified="2025-10-08" version="1" fragment="single">IKQPTSANGTGKWREPSRCEKLVLCEFSHTLLEQMYHPHIYKTSLCSNFNEAFGNETIKQNCLWGNLCTHAHGKSDLRQRNDQTKIFSYDNFVKKTPKISETKGKSFAKIAKSPEKLKNEMELKLSETIYQNVLMKPTKEMSFSDALRSGCSLNKNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM8</accession>
    <name>A0ABV2ATM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004274">
        <property type="protein sequence ID" value="MES1922992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="12104" checksum="63DADC5E9B7FEB21" modified="2025-10-08" version="1">MSLSACYGAISILVLIGYKIEMGQIAEAIIILSLKINLLTESNDNKKSKIAFIVLGALLPLIKNLIDDCNSFLQQPNENDKKILNLLENIRESAGEKLLTANSLLNETFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ4</accession>
    <name>A0ABV2ATQ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">KN17 SH3-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004556</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004392">
        <property type="protein sequence ID" value="MES1923022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037321">
        <property type="entry name" value="KIN17-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041330">
        <property type="entry name" value="KN17_SH3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12805:SF0">
        <property type="entry name" value="DNA_RNA-BINDING PROTEIN KIN17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12805">
        <property type="entry name" value="KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18131">
        <property type="entry name" value="KN17_SH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="KN17 SH3-like" evidence="1">
        <location>
            <begin position="66"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15604" checksum="FB1D908DEAF08EDC" modified="2025-10-08" version="1">MKSPENKSNKKIKFVLPKKSTEKLQTIKKLEDEKKVKMAKPQKIKKKEKREIEKLIKEDKKQNLKWLKKNLIVKIKTKFFNSRFYDKKGIVKRILTDGEEAEIEVLKSKELLKLSIDHLETVVPRFFQFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS9</accession>
    <name>A0ABV2ATS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DZIP3-like HEPN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004621</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004583">
        <property type="protein sequence ID" value="MES1923083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041249">
        <property type="entry name" value="HEPN_DZIP3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18738">
        <property type="entry name" value="HEPN_DZIP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DZIP3-like HEPN" evidence="1">
        <location>
            <begin position="5"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17083" checksum="E321B4CA6DE6E6FC" modified="2025-10-08" version="1" fragment="single">KDRAVYSKDFDISQMYLILRKTGVISNPTNGWNKRPLDQHTEASDDMERIHLNRNVLVHCPTRRIDTTEFNNVALDLSVVCIRFDKTFKTCSIFLDFHRKRFISVIIKVHPDFLTKCYVRNNLSDSTNVFVSPAAANFDKEVIDCKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD9</accession>
    <name>A0ABV2AUD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004838</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005457">
        <property type="protein sequence ID" value="MES1923290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12102" checksum="27C1E363741EC9C4" modified="2025-10-08" version="1" fragment="single">KVCVIYLVVVAVMRHKCILIKWKNKIRVQYRFIIIVQHRVQMLDISSPDTNCIFGLGRDSQNDTLSTVSSQQSSSTSTISNIHDALGISLDGTYTPDTDTFGQKQSPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ4</accession>
    <name>A0ABV2AUQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anaphase-promoting complex component apc8</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">APC8</name>
        <name evidence="2" type="ORF">MHBO_004664</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004761">
        <property type="protein sequence ID" value="MES1923122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558">
        <property type="entry name" value="CELL DIVISION CYCLE 16,23,27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558:SF10">
        <property type="entry name" value="CELL DIVISION CYCLE PROTEIN 23 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="20108" checksum="F65D367D104E2E9D" modified="2025-10-08" version="1" fragment="single">ITSHWTSLFFFIKVYEKGPDGYKKLEECLNFIENLFPKSEYVKKMRIRAAYEERYFDYAQNEYNSIHKKSPFDIEGMDAYSNILFVKGCKNELGKLARDFTFYTKHRPETALIAANYHSISGNHEKAAKCFSRATNLNRNYIDAWILLGHEFIELKQLKKAMKAYLFCEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR0</accession>
    <name>A0ABV2AUR0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Serine-tRNA synthetase type1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004716</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004985">
        <property type="protein sequence ID" value="MES1923171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.40">
        <property type="entry name" value="Serine-tRNA synthetase, tRNA binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002317">
        <property type="entry name" value="Ser-tRNA-ligase_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015866">
        <property type="entry name" value="Ser-tRNA-synth_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042103">
        <property type="entry name" value="SerRS_1_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11778">
        <property type="entry name" value="SERYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02403">
        <property type="entry name" value="Seryl_tRNA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46589">
        <property type="entry name" value="tRNA-binding arm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine-tRNA synthetase type1 N-terminal" evidence="2">
        <location>
            <begin position="3"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="70"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="21136" checksum="714837D05748DF69" modified="2025-10-08" version="1">MPLDIEMFRDVNGDSVKKLKESQRRRFKDEKEIDLIIQQDKICRESVRALDTKRRDFSALNKQIFASTKDKTATKKIEDERKKLKSLKMEIKQSETDLLAKIEKRTKMLNAIGNIVSDEVPVSNDEKDNLVIKSHGELKMPLPEDKMLHHHELLYRIGGYEPEKGAAVAGHRGYFLTVFHIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT1</accession>
    <name>A0ABV2AUT1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Vacuolar protein sorting-associated protein 45</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">VPS45_2</name>
        <name evidence="2" type="ORF">MHBO_004980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the STXBP/unc-18/SEC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006080">
        <property type="protein sequence ID" value="MES1923413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001619">
        <property type="entry name" value="Sec1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027482">
        <property type="entry name" value="Sec1-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036045">
        <property type="entry name" value="Sec1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11679">
        <property type="entry name" value="VESICLE PROTEIN SORTING-ASSOCIATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00995">
        <property type="entry name" value="Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56815">
        <property type="entry name" value="Sec1/munc18-like (SM) proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21297" checksum="C4E8244529B84AA2" modified="2025-10-08" version="1">MTFNFKPPKKISKMIKSEKYAKEDILRLCMIFALRFNTASKETKMLKNLLKQNEYKNKFNIEKLQNFCSREGTQIVDLFSKGFIKKSFNVLQNAIKGVENIYTQHSPAINQILDHLVNNRLDEKNFPFLGKRKNAVGNNILIYVVGGCTYEESMCCNRFENQKVVFGSSTILNSNMFVRSLSKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU7</accession>
    <name>A0ABV2AUU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004759</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005128">
        <property type="protein sequence ID" value="MES1923216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="12"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13245" checksum="55D1AFE44FDE66F8" modified="2025-10-08" version="1" fragment="single">PEVKDTKKAKSKVDHKAEIKKLNESIAELKMHNINLEAENQKNLIEFQTLAKQFQSKAQEQINEKKNELNIKLEEEKELIKKYGSQKMLESIIEPILNIEQAVEVGKNQEAVAAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV92</accession>
    <name>A0ABV2AV92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004855</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005541">
        <property type="protein sequence ID" value="MES1923303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19846:SF0">
        <property type="entry name" value="PRE-MRNA PROCESSING FACTOR 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19846">
        <property type="entry name" value="WD40 REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="34"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="76"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="14611" checksum="6735C920C5563A71" modified="2025-10-08" version="1" fragment="single">MAFLPKKENLLITTSFDKSWSLWDLNKEKNVFRQTGHSAETYAVAVHPDCSLCITGDLSGIARIWDLRSGQAILNLRGHVRQVLSADFSPNGFHVATGSGDCFAKIWDLRAKNLLYSIPAHSMDITSVKFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW27</accession>
    <name>A0ABV2AW27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">proton-translocating NAD(P)(+) transhydrogenase</fullName>
            <ecNumber evidence="1">7.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_005153</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>NAD(+) + NADPH + H(+)(in) = NADH + NADP(+) + H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010006905">
        <property type="protein sequence ID" value="MES1923561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034300">
        <property type="entry name" value="PNTB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160">
        <property type="entry name" value="NAD(P) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160:SF19">
        <property type="entry name" value="PROTON-TRANSLOCATING NAD(P)(+) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02233">
        <property type="entry name" value="PNTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-1278">Translocase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="NADP transhydrogenase beta-like" evidence="7">
        <location>
            <begin position="43"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="10946" checksum="A545E03D2ED9B13A" modified="2025-10-08" version="1">MLDMFKRPGDPEEHARLYAIPAVAFSALYLGLSALFPSVGFTKMAYVASSLCCVAGIGGLSSQKTARLGNALGMVGVGTGIFVALSSLAPSFSHLIQMFGLLGVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWB2</accession>
    <name>A0ABV2AWB2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA-binding protein 39</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RBM39</name>
        <name evidence="3" type="ORF">MHBO_005228</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007248">
        <property type="protein sequence ID" value="MES1923621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006509">
        <property type="entry name" value="RBM39_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48036">
        <property type="entry name" value="SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="2">
        <location>
            <begin position="29"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15764" checksum="1335F5025707DA32" modified="2025-10-08" version="1" fragment="single">MKIENLVKKIENKKLKKGRKRDFIDRDECTIFSCHIHPAVDDKDIFEFFSQCGPVRDILLMRDNKSGTSKGYGYIEFHDKESVVNALTTNGQYLGGSPIMVSVSNAEKNRAAASSRATNNIDGPFRLYVSNIDASISADDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE91</accession>
    <name>A0ABV2AE91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">histidine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000056</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>tRNA(His) + L-histidine + ATP = L-histidyl-tRNA(His) + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17313"/>
            <dbReference type="Rhea" id="RHEA-COMP:9665"/>
            <dbReference type="Rhea" id="RHEA-COMP:9689"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78527"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.21"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.21" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00773">
        <property type="entry name" value="HisRS-like_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="entry name" value="Anticodon-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.200.10">
        <property type="entry name" value="Fumarase/aspartase (Central domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015807">
        <property type="entry name" value="His-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041715">
        <property type="entry name" value="HisRS-like_core"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00442">
        <property type="entry name" value="hisS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11476:SF7">
        <property type="entry name" value="HISTIDINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11476">
        <property type="entry name" value="HISTIDYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13393">
        <property type="entry name" value="tRNA-synt_His"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="8">
        <location>
            <begin position="444"/>
            <end position="804"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="318"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="318"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="858" mass="96335" checksum="C1851E158ED7818E" modified="2025-10-08" version="1">MPEPQTFYIGANFKPTLKQILDISSKRHLKIGFDQTIPIRLAEPKPEYTERVDRLNRALLFIVLTKLLKRRQLSENEAAIKYNIGMLNSNRISSPKFGIESYYDSVPSGKFAYFDYENDFPFSFEFCRVQSHLARIALAAEDLRLLADLSDVVSALSCEALRQNTAAFSSDIESKSQNVRRSDKTMLSLLEDSRLSTKTAEGDFGELKDATLVNGTVRSQISEFLEYVQRSVNEPPTEIATNIALEKLNTKTANLANHLKLLSSCTKNKLVLQNAFADEELPAGSAEATGSFLEELERSLRLLSAEALVAMERIAGEEKDKRERVERAQRRKEEIALKRGNGSGGEKEDRKAAEKRKKKLAKKSDVGLGKANRLFYDKFKHLSNAKTPNRSAALAAMRAFREEKNFVSRLLRNATKTQKLQTPRGTRDTDPRMAAVRDEAFAKIKAVFDRYGAVQIDTPVFEKKEVLLNKYGEDSKLIYDLKEQGGEPLSLRYDLTVPFARYAAMRGLKEMKRYHIGKVYRRDAPAVSRGKFREFYQCDFDIAGKFGRMLPDAEILAVCSDILTSLELGEFVIRVNHRVLLDAILESSGVPASKFRTICSAIDKLDKCSWAAVKQEMVFEKGLSDAVAEEIKGHIFLKGRDCSDLLAQLRARLREKRATSEALEEMETLLGYLDRYGCAKNVSLDFSLARGLDYYTGLIFEAVLKSVENSPSIAGGGRYDHLIGMFSGHDLPAIGLSIGIERILAILGGESNAMGSLRAVRESKTEVLVASAVKEMALEKISVCTMLRKERISSEYVLRDELTPQQQINIALDKGFPFVVFIDRKFSEGMVQLKNMKTKSKEHLKIADVVSVVRASRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEU6</accession>
    <name>A0ABV2AEU6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DNA-directed RNA polymerase III subunit RPC4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000222</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007811">
        <property type="entry name" value="RPC4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13408">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13408:SF0">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="16"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="39"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="87"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="98"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="239" mass="27529" checksum="3EE40D9BE54FA11E" modified="2025-10-08" version="1">MAEKNLPNFEINIPNRRQRSSKQRTTKSLSEVFGVPSKESSKRVEFKKRNFKKRVDFNRPKDVPILQRKSNDSKEKPKRPLNKQKPIATTKKTTKSIAKIEEESDEKKENDYSDSCESAYPVTISYPPINLALQKLAVKGEKRPFKLAQIIEQSLNSDLQNFKLEELNCEDLFLTGNSPKLKNYMLQLPSLLPLNKTKQTDFDDNKCDINELTEQQLGELLILKNGETKLKIGNVLFDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEZ9</accession>
    <name>A0ABV2AEZ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GDP-mannose 4,6-dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000252</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.47" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000033">
        <property type="protein sequence ID" value="MES1918258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006368">
        <property type="entry name" value="GDP_Man_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43715:SF1">
        <property type="entry name" value="GDP-MANNOSE 4,6 DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43715">
        <property type="entry name" value="GDP-MANNOSE 4,6-DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-binding" evidence="5">
        <location>
            <begin position="21"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14331" checksum="1A37177335C508BF" modified="2025-10-08" version="1">MSIKQNGNQPFLLKNNSKIALITGITGQDGSYLSEFLLKKGYEVHGLTRRDSRSCFSRIDHLINDSSIFGKKFFMHRGDITDSANLVRLLKNIGPDEIYNLAAQSHVQVSFETPENTSQINAIGVLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB6</accession>
    <name>A0ABV2AFB6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tyrosine-protein kinase ephrin type A/B receptor-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000352</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000051">
        <property type="protein sequence ID" value="MES1918381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="113" mass="13201" checksum="13B79DFF5252546F" modified="2025-10-08" version="1">MNNLEILLYHEDMAKSKVFILSESIRIFLSDFDFMRQFHIRYKATVTKRISVEFLQTKVCYLPCGDSYCFSEGKHCYQCTSSSYFNGRKNKCEPCIGNTVPSSDHRSCSFYKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR2</accession>
    <name>A0ABV2AFR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000271</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000036">
        <property type="protein sequence ID" value="MES1918284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13143" checksum="5680596A85448ACB" modified="2025-10-08" version="1" fragment="single">MISSFFVKLDSISTIYRKYQETAYKVYNFFEDADLNKNFGLYTRLIQQFTQFCTVSGDMVKPMISSDFLNYLNDVLKLGLKAFFTDLGKTLTSMTAKGEDMSQLATELMKFISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT0</accession>
    <name>A0ABV2AFT0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000233</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16395" checksum="B774F7727EF8CF7F" modified="2025-10-08" version="1">MDKDSRAEVVEKQLMRWNKILEDGTKLHFFLNFANDLRQLVDSNKCGSDIFDINILSTCVDKIIIDNLSVFRIHNKDDNSRKSSDWSAIEESIDNFQKEKCDVLEEWTEKINLLEGDFQNTSKFSAFNKSKSKPCSRIPID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX6</accession>
    <name>A0ABV2AFX6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000519</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000085">
        <property type="protein sequence ID" value="MES1918567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051034">
        <property type="entry name" value="Mito_Enoyl-ACP_Reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43981">
        <property type="entry name" value="ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43981:SF2">
        <property type="entry name" value="ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="3" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0809">Transit peptide</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23646" checksum="1AB730FD3E6C11AC" modified="2025-10-08" version="1" fragment="single">MFQLKTKYIFPTAKRNTTNLHKNSAKFLTTDYRAYNYKEHGDPRHVLSFSEVRFPEKPNFRVKLAPINPSDINMIEGRYPMLKQSIVKVAGNECVGYYSDNGVQRLAIPRYGNLGTWRKFIHAKESDLIILPDHVRYHPFLSAVSINPLTALRLLRDFASLKRNQYIIQNTANSTVGRCVIQLAKIFGFKTINIVRNRFLQILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG18</accession>
    <name>A0ABV2AG18_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UV excision repair protein RAD23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000562</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Multiubiquitin chain receptor involved in modulation of proteasomal degradation. Involved in nucleotide excision repair.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RAD23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000095">
        <property type="protein sequence ID" value="MES1918618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14270">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14281">
        <property type="entry name" value="UBA2_Rad23_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01805">
        <property type="entry name" value="Ubl_Rad23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004806">
        <property type="entry name" value="Rad23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10621">
        <property type="entry name" value="UV EXCISION REPAIR PROTEIN RAD23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10621:SF0">
        <property type="entry name" value="UV EXCISION REPAIR PROTEIN RAD23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00627">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01839">
        <property type="entry name" value="RAD23PROTEIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00165">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="4">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="UBA" evidence="3">
        <location>
            <begin position="145"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="domain" description="UBA" evidence="3">
        <location>
            <begin position="239"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="79"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="288"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="80"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="109"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="137"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="288"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="310"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="320" mass="35999" checksum="4F78C15B5879F8BD" modified="2025-10-08" version="1">MRISVKTLQNKKLVIDINETDKVADIKKTLEKEHDIGGTARQTLIYKGSILKNDQIFLKDFKAKENDFIIVMVSKNKGGRKIESKTNKPETKQTQTPPKHESDQKNILNQNSPQQYDNSSPPPQNSNSLPNNANINTRSINPQTESNSSAQNPLEQLVNLGFERERAAAALRSTGNNLMSAVESLFSQGVPINLQGRDLNSRNIEILNLMTNLRRLSSQQGEQNPPNQNPSFAGRLSISLTEQDRLSLERLQNLGFNRSDCIQMYIACEKDEQAAANLLCEQASEMVDLNDEIEMEDNEDDEENEENENDVGRDGENKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG63</accession>
    <name>A0ABV2AG63_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000610</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the DEAD box helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000105">
        <property type="protein sequence ID" value="MES1918680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="11">
        <location>
            <begin position="86"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="9">
        <location>
            <begin position="117"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="10">
        <location>
            <begin position="304"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="6">
        <location>
            <begin position="86"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="483" mass="55261" checksum="D12BBD3180AD976E" modified="2025-10-08" version="1">MAYSGSYNSRFKRPHSYSNNRFAPKRRQNDGFVLEKIDWRKLKLAPFQKDFYFEHPEVTERSTGETQKILKENEITIYGNAPKPINTFRESGLPPYIMKSIDKLKFEHPTPIQRQSWPIALSGRDMIGIAATGSGKTLAFLVPLIVHINAQKPLSKGDGPLVVIVAPTRELATQIMGQIPNFAESSRIRYTSIYGGVPKHSQEKQLSRGVEIIVATPGRLLDFLQSKVTNLKRVTYLVLDEADRMLDMGFEKPIRQILSQIRPERQTLLFSATWPKEIQKLASEILNNPVHVNIGALDISSCKNVKQDFEVVEEYNKQMKLLLYLRQLPPRDKVLVFVATKAMSNQLAQNLKTNGFYCAAINGDKRQSQREFILSKFRNGEISILIGTDVASRGIDIRDIRVVINFDFPNTIEDYVHRVGRTGRADKQGRSYTLLTRKNANKSGDLIRLLKNDKKKIPPDIERLYNNYGVNARSNNSHYRKWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGL9</accession>
    <name>A0ABV2AGL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005307</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000078">
        <property type="protein sequence ID" value="MES1918533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052778">
        <property type="entry name" value="Centrosome-WD_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16220">
        <property type="entry name" value="WD REPEAT PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16220:SF0">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN WRAP73"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82171">
        <property type="entry name" value="DPP6 N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="353" mass="41451" checksum="715E8BB152039AE8" modified="2025-10-08" version="1">MKFEYELIERLLARSIKISPDKDKIAILTKKEKKFQLLIFKDMAKICELHLNSGTVKNVEWSYDSCYLAVFQKMSNFVEIVNIQNEKIEKFHFGQTQIFGCLAKTDNYLLTISEFALKMTISIIGKKIRFFIEMPKFKNKNCFDFSQNGKFLVVAERNRNKDKLFIYDINNLFKLYNEFEVSTEDLSIVKMTNETNLVSVLDWEFNNQSLVYSTEGELIFKTQSNIPQCPSFKNLICSPQKDKIMLFSNKSLTLIEPLKSDKPILNFSFSDLAIIFKSTSYQIFIQCLYIEVPWDYVTNETKNLSFNNDRTKYTTNIDKTIAKFYAPKINYETISQASWSKDSRYFSVVLCFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS7</accession>
    <name>A0ABV2AGS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DEAH-box ATP-dependent RNA helicase prp22</fullName>
            <ecNumber evidence="2">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PRP22</name>
        <name evidence="2" type="ORF">MHBO_000612</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000105">
        <property type="protein sequence ID" value="MES1918684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF271">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX40-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="13"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="30611" checksum="423EFACF790B9B52" modified="2025-10-08" version="1">MALPILKVKDELLRRIEQEQCLIITGDTGSGKSTQIPQFLYNSGYRRIAITQPRRVAAVSLATRVSTEMAVKLGQKVGYTVRFDDCSSDNTELKYLTDGCLLRECIADRNFSRYDVIILDEAHERSLQTDILFGLLFETLRRRPISHGKKGLRVIVTSATLDTKKFCEYFNCRSFHIPGRCFPVEIRNSDEAPRRYVAAAVDTVLAIHRKSAADGHVLVFLTGREEIEDACEMLGRKVDALIDENVDLPDIVILPGIFICPSNRYKNLAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT7</accession>
    <name>A0ABV2AGT7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000781</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000148">
        <property type="protein sequence ID" value="MES1918886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd11660">
        <property type="entry name" value="SANT_TRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052450">
        <property type="entry name" value="TRBD-Containing_Protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46734:SF1">
        <property type="entry name" value="TELOMERIC REPEAT-BINDING FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46734">
        <property type="entry name" value="TELOMERIC REPEAT-BINDING FACTOR 1 TERF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="3">
        <location>
            <begin position="199"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="2">
        <location>
            <begin position="199"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="30460" checksum="DF821235E47CA4B8" modified="2025-10-08" version="1">MISSRLYLARIRKKYDTRKITENFVQLVENTLTSKKQVLTQHLQTKLDKQTETAFRKIKNNLNRLDKALLKQMGGKNSKHKIGATSVETRHPSKLNKLSKNDKTAQTNNSNIIKPKPSIELLKTAKMVLPKRNLRMNLRSRKKISANKSDKEIGKVDKLSEKIATKRKNENECDIKIKKMRIVKAKNCTNLSNNATNSSIRRVRHTWSDLETESLVEGVKKHGAGSWSEIKSDETLTFSPRRTNVDLKDKWKNMVKSGKFQEYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV9</accession>
    <name>A0ABV2AGV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000808</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000155">
        <property type="protein sequence ID" value="MES1918918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16787" checksum="553B08FA7D5C4F54" modified="2025-10-08" version="1">MSLYCSHTILTNLLLVKQKRFTIYSIYCILTINAVHLTLFFLEIDFVYSIEWSWFLLLWGMLLSYVEKKREKVSIAAAISSFTYLLLSGYTTYRGYIPSWLGWKISLGITFSLFGVDYIAFLVIYWTTMRKNSDTKSKDHYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH15</accession>
    <name>A0ABV2AH15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000839</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000164">
        <property type="protein sequence ID" value="MES1918955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047300967" evidence="2">
        <location>
            <begin position="18"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="242"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="32471" checksum="093F613CA156DE8B" modified="2025-10-08" version="1">MVLNCLLLLIQVCSVFADLESNSQKCLSIDRKEIEIKVKIFVPFGIEKSFENVDSRIDSMIKTANYVFKKQVGIYFNPEIFKVPKNVKNLFNREEVCQKNTPFSEYKDSFEKFLNIPTDDAIIILLSLCSFAKNGKMYYENVLMDSPVYKMAIVQFGEDEEKKFTVTLGNILGGKQDDYPDSLFNSKIPEVVKDAKIYQKNIDLICTSAKEMIEHKNSAPTIKDEEVLDDSRFNNFKHKINVVSSICIIIYIVAICCLAYCFYKWCKKSRNNKNRKKYLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH16</accession>
    <name>A0ABV2AH16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000169">
        <property type="protein sequence ID" value="MES1918971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="256"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="257"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="353" mass="40636" checksum="74AE055CA859F95C" modified="2025-10-08" version="1">MLRAQRTHKSLFNDLCKRSLIPPFSSCFYFIRTFALKAHPSDGAKVRVPEPDDKTDWIRPNFSEYFQIRKRIRQESDDQFRRSYLRKIEDATMRGMEQISLKKENSETHFDRKSTFGEDQFGDKKTFRMAKELKGMSANAIPDKTMRQIRTLLPFLDAEDEHDYVFRMNRAASAAVFRDEATRTALNEEMVTRNKLLIGKFDEHSKRLAHEAEQIKRELSKDESAIERASVQSALYKWFCLKIDFSSDELTTGAVTETEKELSGQQRKSDKTAIESDPLPFDVKGSGSGDGSEYAETKEKVFREIKELSKGNFTLEEARDLLSEESVLALVDGMRTCLNTAHDLLIVSNCNFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHB4</accession>
    <name>A0ABV2AHB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PCI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000926</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000187">
        <property type="protein sequence ID" value="MES1919052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000717">
        <property type="entry name" value="PCI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019585">
        <property type="entry name" value="Rpn7/CSN1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045135">
        <property type="entry name" value="Rpn7_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14145:SF1">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14145">
        <property type="entry name" value="26S PROTESOME SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01399">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10602">
        <property type="entry name" value="RPN7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50250">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCI" evidence="1">
        <location>
            <begin position="66"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="30483" checksum="6075623A60F5D595" modified="2025-10-08" version="1">MEMSPNANIRLEVIFEILKVFIFYDDFVAFDEYVQIAVPLEKESIDWEKRNQLKVYKALNYSEKGEFRKAAKLFVSSLSTFASEDILPFSDIILMASAFSFISLDRLSLKSQIIDSPEVVSGLADLPSLDLLLKSVYELKYSDFYTALGKLKPIFETNRFLRRHFESFENSAKRVIYGQFLESYVSVTVSSIAESFNVSVEQIYKDFFVYISNGEIEAKVDRQEEVIHRYVKDQQAEAFYKIAEAGQHLSQKAQLLLNKIQNKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC5</accession>
    <name>A0ABV2AHC5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA pseudouridine(55) synthase</fullName>
            <ecNumber evidence="1">5.4.99.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000882</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.25" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000176">
        <property type="protein sequence ID" value="MES1919002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039894">
        <property type="entry name" value="Pus10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048741">
        <property type="entry name" value="Pus10-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21568">
        <property type="entry name" value="TRNA PSEUDOURIDINE SYNTHASE PUS10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21568:SF0">
        <property type="entry name" value="TRNA PSEUDOURIDINE SYNTHASE PUS10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21238">
        <property type="entry name" value="Pus10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Pus10-like C-terminal" evidence="4">
        <location>
            <begin position="158"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF21238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="290" mass="33650" checksum="534F1FCADB923689" modified="2025-10-08" version="1">MNKPKLSRTLKSCILEMLKSPLLDKNRFKKNDFEICDFSTGILLPVVTVIEDEIQHVHTKDDIRNLVISNVEKETGFKHNKNSDVIINAVFEYKNDQKEVKHIFGLIGENKKKNFSKNDVHRNENGILINMEKIIAFLNERKIADIEIKWEITRNPIYLTGNYIKTIRNISHSKGFVGDLKVATSIEEICSNDFVKFTESEKYSFSSLGREDVDVKMLGEGRPFLIELKNSKKDVSKFQKKILDNLCNKINKKWKNQVQISKFRLASQKDIDQVKKNICKSKIYSFLNTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH0</accession>
    <name>A0ABV2AHH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA excision repair protein ERCC-6-like 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ERCC6L2_2</name>
        <name evidence="2" type="ORF">MHBO_000976</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000201">
        <property type="protein sequence ID" value="MES1919112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050496">
        <property type="entry name" value="SNF2_RAD54_helicase_repair"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629:SF7">
        <property type="entry name" value="DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629">
        <property type="entry name" value="SNF2/RAD54 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SNF2 N-terminal" evidence="1">
        <location>
            <begin position="8"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12330" checksum="4CE8F0F7DE012BF1" modified="2025-10-08" version="1">MSKKLRDYQKEGIKWLYNCYSNKRGCILGDDMGLGKTIQIIGLSMAILNKPDKNKFGCIENIKNESPILIICPKSVLFQWKEEYEKWGNFKVTIFHSSSTVFKQFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH4</accession>
    <name>A0ABV2AHH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000995</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AMY1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000206">
        <property type="protein sequence ID" value="MES1919131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026060">
        <property type="entry name" value="AMY1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13168">
        <property type="entry name" value="ASSOCIATE OF C-MYC AMY-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13168:SF0">
        <property type="entry name" value="C-MYC-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02028">
        <property type="entry name" value="CMYCBINDINGP"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="83"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="100"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="118"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14521" checksum="7E717B67718ABBDB" modified="2025-10-08" version="1">MATTKTQFISYLESNGVIEALSDVLLEIYEKDSKPENPLNFIKSKFSPEKAENKSEKEEIENLKKQLAEKEEKIKALLKQIEDLKDENAQKEGANNGTDLKSEKEEQPIETDKKSEETNNGNQKMED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS1</accession>
    <name>A0ABV2AHS1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000235">
        <property type="protein sequence ID" value="MES1919236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="1">
        <location>
            <begin position="32"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="667"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="667" mass="78299" checksum="43A489724C3B1325" modified="2025-10-08" version="1" fragment="single">MSSEENNVKSNNFLKDYSYLSDGQVKTSFSIAIKSFFDRLYQTFDSENNGIVDENEYAVTIYILKNHSTICEKIDLTDFFTKSILIIFDKNGQNKNFDKITKILGKIERSNRWKLLQKFTKRLFFTKNGVFGILDKVILRIFDIEEKLNDEEDLKEMSNLLLFTLQNVNSLPDKEYSQATNFLAKFLSNSKNNFSIPKNVINKFRKTKNYHNRQNFMNSETELKLLQSEMKVDLKMALESGSGLNNFHVKNLFDKTVLKCLKMADKQSSSKIELTCLAVDQFVDIYNNFECCDNENDFGNNENVIFEAFAKILKFDEFSLTEKTFVKILNSKLSDKFFDKLIKIGNFNAMLQIGSIAKVDLKFNNLEDRIIDFFVDKLNFNENTKFYFEDFANWIIKDKNLFDKSVKSILDDILNFQITENNFTDLNTPQNLKKIILRFSQILIILKKIDEKNSNLIKTKNVVEKSIDLASICSKSAEKNCEKEETKNFLVHINRFLRKIFCHFYKEKFKILAEKTIIDLGEQSFQSLRFALFETDSRLQTEILKMVKIMISFPEIVKTKIFQNEMFLDTVFLAIKTSTILNTKYFDKKENLFDENLSENKENIPESAFEEDEKCKIFKNLLKIEKYKKSNFCLQNWTELIVQFKVLKSDSPKIVLEILDALIRQLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS4</accession>
    <name>A0ABV2AHS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001076</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000228">
        <property type="protein sequence ID" value="MES1919215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="232"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="271"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="345"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="429"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="463"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="509"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="860" mass="98154" checksum="64F86DD92FCA47EE" modified="2025-10-08" version="1">MLFSRFASKFGINVHVMRLTVLCVIVYPEDLSFHTLTTLSKAGEPDNLALIVLEYIFLLAIPFYVVALWMNKVGTMSGNRDAVANSFLADWESSYEFKGAEKRKLSVFTVFVFISNTVFVFYFLFFLADFKMAENTFHTDWRDNVSLIMPVVTLLIYMADMLYNLFRRMRNSYIYRSFFYLGLFVAYFCLEMHIDLLSNAMVSSAAPKPSAWNFSDGFYAEGWNWGGAMKVLWLYLAIFMSFNFALMLFYHSTTLISLTFFVIKWMFSLGGIAAILSIGGILLVLIGFALSAYSYMQSYFYSYLTLEKSFKAFLDMMKAIKDVVMAFLSGFSDIANALNKVTGGYFCIVLIGVTILVAILVLIGFGVGVASMLMKKLFELLQMLFKVIRSIRNLQDVFTNIYTFTKKSEAMQDSASTSSVSKMKQGSTIYYFMVLLGMLITIGGIVTVYFYAAERYLEVSRPVFVMTLFIIEILLLAYLGFIYVTEYIFSQNYDLVIMFLRILPGYGILYTKISLILVCLGVALILASYAIGYSSGWMRNSNFFDEMDVETFVWPSFERLCCPLVASPRGRQHDDNACATLCNRLCCCFDKKVDQINDGDTSAKFVKYIFCPCTEDLNPVYDDTRVANLFANFVCCCFYDGKFQRSWNPIKICFCVPNFGKVAKMKNQLDNTFDVSVVANNKIEESHLNYYEIKTRMTKDRYNKAKHFRPIIPESAEKTTGFSLDAKTMAKLKGPPLPPGLLGSFGFWQVLKEIFQNGFNKFAQYLIPILMHGITLYIMYKALTNTWVLVSFKSDSVFSSVLSDTSTESTSDHVTEVERNKKSMCPVLDLINFIKNLMIKLIFAVLKSVFPRFYAQIISF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW8</accession>
    <name>A0ABV2AHW8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Endonuclease/exonuclease/phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001138</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000245">
        <property type="protein sequence ID" value="MES1919280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050410">
        <property type="entry name" value="CCR4/nocturin_mRNA_transcr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12121">
        <property type="entry name" value="CARBON CATABOLITE REPRESSOR PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12121:SF34">
        <property type="entry name" value="PROTEIN ANGEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endonuclease/exonuclease/phosphatase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="321" mass="37368" checksum="4C382F668E5BFB76" modified="2025-10-08" version="1">MSFNVLADIYATEKAYPYVQKRFLRWDYRCEIVLNEIARYRSHVVCLQEVQYSHYCNFFSKQLMLYNYEGIFKKKTRTSLYSDPNAVDGCALFFDKSVFRLVQQFTIEFNEAADELFRDSDGPRKEIVRRLARDNVALVCTLEDLRTKRRVCVANTHIFWDPLYEDVKLWQTFVLCKEIQSKLLFGNSSNEQKYPIIICGDFNSTPDSQVYGLLTKGIVDLNAQLFKNDKLGIFSNTKIEHSQPFESAYKEVLNKEPSYTNYTESFKGCLDYLLFSKGSLEVLKVLDCYPENVLKEHLALPSPRFASDHIQLVAEFAFGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX9</accession>
    <name>A0ABV2AHX9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000758</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000142">
        <property type="protein sequence ID" value="MES1918862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="393"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="431"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="431"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="441"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="466" mass="54227" checksum="03D6C7AA15385EDD" modified="2025-10-08" version="1">MESKRFLYFCLFYLFTFCVTDISLEAPIALKHVLKFKGEVRESKKGMHLLIRNPEQSILYDLRYPTFISTLKVVLNSPKCNNLKMVNVYISKSTNEKSKAGVKRMHCSDITNGKPIVFKFKNVGAARFVILEFLTDSRTNNLQKYNFVKDVQLYTTVPFTEPYKLKNGVDVKKDFHQMNTTVTPKSNSSPKKKYIKFEKRKVSKIVLKMAPMHQFSKNNKPILKVIAKGEPDISPDYLDCTMIVDAENRSYVSVFPDSFETSHIQLENFDQIRSIAIYRPEIGRLVGEGKNNKWVSKNETLVDVSRIEFPKVKKGEEFHALVTAYESDEEKTSIKIIAKSGAMDLRFKAKQVVVFGDEKVGEFMLFTNSVQEKKEKKKMEDAKRLELEAKKKANEFKKKQEEKRKQEQKEKELRKKREEKLLKELEKKQKELKKKVKKRKLGEPETAKSVEDKAFDDLEKSENVYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI03</accession>
    <name>A0ABV2AI03_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="4">PPIase</shortName>
            <ecNumber evidence="4">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001155</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000250">
        <property type="protein sequence ID" value="MES1919300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01928">
        <property type="entry name" value="Cyclophilin_PPIL3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024936">
        <property type="entry name" value="Cyclophilin-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020892">
        <property type="entry name" value="Cyclophilin-type_PPIase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044666">
        <property type="entry name" value="Cyclophilin_A-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45625:SF2">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45625">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001467">
        <property type="entry name" value="Peptidylpro_ismrse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00170">
        <property type="entry name" value="CSA_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="5">
        <location>
            <begin position="6"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18277" checksum="E801625563A49AE4" modified="2025-10-08" version="1">MSVSLQTNYGDIKIEVFCDSCPVSAKNFLALCASGYYNNTLFHRNIKGFMIQGGDPTATGEGGKSIFDKNFDDEISDSIKHDRKGMVAWANSGPNSNNSQFYIIYDAAPHLDNTATIFGKVIFGFDVLDKIENAKVGAKYKPIDQIKILNVKIHANPIASDEINFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA0</accession>
    <name>A0ABV2AIA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Vacuolar protein sorting-associated protein 4B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">VPS4B</name>
        <name evidence="4" type="ORF">MHBO_001084</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000231">
        <property type="protein sequence ID" value="MES1919224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050304">
        <property type="entry name" value="MT-severing_AAA_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23074">
        <property type="entry name" value="AAA DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23074:SF83">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 4A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="3">
        <location>
            <begin position="81"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="7"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="18"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="254" mass="28596" checksum="5F0897CAED2D003F" modified="2025-10-08" version="1">MSKMKQQHNNESNTNNDLSDKDEANDERNKMEKALSSAIVIEKPNIKWTDVAGLEAAKNMLKEAVILPIKFPQLFTGNRKPWKGILLYGPPGTGKSFLAKAVATEANNSTFFSVSSSDLVSKYLGESEKLVRALFESARKSSPAIIFIDEIDSLCGNRTDGENDSTRRIKTEFLVQMQGVGKSNEKVLVLGATNMPWELDPAIRRRFEKRVYIPLPDEEARKAMFRSFIAKSPNELCEEDFEQLAGRTEVFKRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AID0</accession>
    <name>A0ABV2AID0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Nucleolar GTP-binding protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">GNL2</name>
        <name evidence="7" type="ORF">MHBO_001277</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
            <location evidence="1 5">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000291">
        <property type="protein sequence ID" value="MES1919443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01858">
        <property type="entry name" value="NGP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030378">
        <property type="entry name" value="G_CP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024929">
        <property type="entry name" value="GNL2_CP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023179">
        <property type="entry name" value="GTP-bd_ortho_bundle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012971">
        <property type="entry name" value="NOG2_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050755">
        <property type="entry name" value="TRAFAC_YlqF/YawG_RiboMat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11089">
        <property type="entry name" value="GTP-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11089:SF9">
        <property type="entry name" value="NUCLEOLAR GTP-BINDING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08153">
        <property type="entry name" value="NGP1NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51721">
        <property type="entry name" value="G_CP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CP-type G" evidence="6">
        <location>
            <begin position="190"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="454" mass="52080" checksum="7B6C51DBF0BB66C9" modified="2025-10-08" version="1">MSKTLLAPRNKKLNKLNAQRDTATAKRLRLHKQKTIRNKKGALLKNQPKSLLVGKDTGSSAKIQPDRRWFGNTRVISQNSLDEFKEAMDLQAHDPFKIVLKKRKLPLSLLQEPKKQKNSKILETETFEQTFGSKSTRKRPKLSFENMTDLAKAVRKSHSDTRSDNDDDFAQISESARESIFSKGQSKRIWSELYKVIDSSDVVLQVLDARNPVGTRSEHIEKIFRKKDCHKNMVFVLNKCDLIPNWAVRQWLRILSKDFPAIAFHASIKRPFGKGSLIKLLRQYSKLNSHRKQISVGLVGYPNVGKSSIINALKKKKVCKVAPIAGETKVWQYVTLFKQIYLVDCPGVVCPNSDSDAEIVLKGVVRVENVENPEQYIPEILKRVKKEFLERAYGEFEWVDPEQFLAEFAKKSGKLLKGGEPDVNNCARMILHDWQRGRLSWFVPPPNEETEMEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIM1</accession>
    <name>A0ABV2AIM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001083</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000230">
        <property type="protein sequence ID" value="MES1919223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="421" mass="48549" checksum="2726962CD88FB888" modified="2025-10-08" version="1">MSIIFLIILKKFQCDCVFENKDIYSIPDQICGDEFSLNSDFIKENRICYIGCKNEKFRIKKNFLVPSIPYAHCVNGQLKYRGKTFTGQNPLCVRSEEELCYVDIIKKINFDWNCSKTAIKRNTICRFRCKKGLRINDEIPLIKCGEGGKFFQLNTAKLVANLDKFIGKYLMCFDDSHCDTFSLNTTTKITGCIKNGIKILNQSRYIPSESVCDAECGEIKKVKCLFGKWINFETNKSLNKCRKRFCPNNLYSDAMHTGNCHNLSTIPIGGRCSISCINGFSDDFGINNREKSVLCDSFGEFVNEDGSLFDPSNIEIFCHSNKTCSHTQIKNMKNIFECSKAQYFTSGTFCKWDCKFSEVKLIFCYDGIWFEKDSNDGIKKFFFECIPRFYVNFRVLSYEKTRKNRSRNKLHSTESGLLGHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIM4</accession>
    <name>A0ABV2AIM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001341</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000315">
        <property type="protein sequence ID" value="MES1919526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="14015" checksum="414637995D0BF890" modified="2025-10-08" version="1">MISESHFVEVNDFALRLHSLSLSLQGYCNDSERMPRIKISRIFHLRQNMRAPIVKLQIVYNKAQTLMKALQYGKYVSDQMFRLAELLEEKKELSGFLMSKRTGMFRTGKIMDIISEDFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN3</accession>
    <name>A0ABV2AIN3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001347</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000319">
        <property type="protein sequence ID" value="MES1919532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00030">
        <property type="entry name" value="C2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="2">
        <location>
            <begin position="1"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="2">
        <location>
            <begin position="154"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="292"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="403"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="301"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="519" mass="59660" checksum="29D7BD24F6D14C99" modified="2025-10-08" version="1" fragment="single">IFSLRDGVPSIHLVTLKIIGAKEISVPLGTRLPDIRAYVQISDFVLRTKLRPRTSKPYWNEQFQVELPFLATKELTIFIFDAKNRIIGKSKIKFLDEDGLSLFNKNEEEQWHFLKNTKENKSGRIKIAINSQIINLAEKKKIFYSKNLKEPLNAKSQNEFDMRAKANRNQNLLVVNVLRGIHLSKLTTSTDELNTFVSIVLNENETKSTRIIEKCSSPVWQEQFEYSTKKSSFELQFKVFNSISGNVNILLGLIKLKVDFKNQLRWREQWIELAEEGQEQLIDSKIFNNTDLATENDDMKPSNSLPSKSRSNSSFQNEIEMVENDGFANKNSSSTDLNQFSDSPSKAMLLVSLKTSSFGEQKQSKLFFSPKAKNGLRIEKKSYSSKMQRLLSPAKLTKSFLELSKNRKEKKTSTEKNNSSYSNTLKKQRLLGPYSLILKRKFMKKGKRVELKIVDNEIIWTDQTDQEKFSALKIDRELSVRLKTDNDIVFQSGDISKTFSGESAIVKALFKDVNEILNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIU7</accession>
    <name>A0ABV2AIU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">60S ribosomal protein L9B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPL9B</name>
        <name evidence="5" type="ORF">MHBO_001153</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000250">
        <property type="protein sequence ID" value="MES1919298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.930.12">
        <property type="entry name" value="Ribosomal protein L6, alpha-beta domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000702">
        <property type="entry name" value="Ribosomal_uL6-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036789">
        <property type="entry name" value="Ribosomal_uL6-like_a/b-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020040">
        <property type="entry name" value="Ribosomal_uL6_a/b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002359">
        <property type="entry name" value="Ribosomal_uL6_CS2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11655:SF16">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11655">
        <property type="entry name" value="60S/50S RIBOSOMAL PROTEIN L6/L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00347">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002162">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56053">
        <property type="entry name" value="Ribosomal protein L6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00700">
        <property type="entry name" value="RIBOSOMAL_L6_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL6 alpha-beta" evidence="4">
        <location>
            <begin position="52"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16099" checksum="054948D897CD9518" modified="2025-10-08" version="1">MRLRGSSVRVAYYHGGKKLSAMVNTIASHVENMITGVTKGFRYNMRLVYAHFPIDTTITTKEGRMHLDIRNFLGGKKSQHITMGEGVEITKSEFVKDELILEGNSIEEVSQSAASIQQSLSIKGKDLRKFLDGIYVSQKGFVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY8</accession>
    <name>A0ABV2AIY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DNA polymerase delta small subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001436</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA polymerase delta/II small subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000351">
        <property type="protein sequence ID" value="MES1919640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007185">
        <property type="entry name" value="DNA_pol_a/d/e_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040663">
        <property type="entry name" value="DNA_pol_D_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024826">
        <property type="entry name" value="DNA_pol_delta/II_ssu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10416">
        <property type="entry name" value="DNA POLYMERASE DELTA SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10416:SF0">
        <property type="entry name" value="DNA POLYMERASE DELTA SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18018">
        <property type="entry name" value="DNA_pol_D_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04042">
        <property type="entry name" value="DNA_pol_E_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0235">DNA replication</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA polymerase delta subunit OB-fold" evidence="4">
        <location>
            <begin position="27"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="DNA polymerase alpha/delta/epsilon subunit B" evidence="3">
        <location>
            <begin position="175"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF18018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="427" mass="48103" checksum="A9B26DA9A002F603" modified="2025-10-08" version="1">MAQKRLSSDLKFQNISESITSPLAHDYHHLYKARLSALRFPLEKKAALKWPNLEIKGLSSLNSSESECVIIGVLYKRMERKINPLDFFNGKTTQKNEPSFVSRNDKLFLEDFEGRIEIENLDAQKWTTGFFVAVKGNQTSSSRFFVNDFLLPGLPIQRFNIRGKSLTKNGDRKHVAIISGLNFSKNLGFCKILGDFLTGNIEDKKLKNVSAKISHLVIAGGSFSDLFPKYEIDPIFDDETKNIENESTTQVKSLDSYLSYLSTSIPIFLMPSKTDPTNLLLPQQPINPSLLPVSHSFSHFKCVPNPALFSLNGMTLLGTSGENIEDIKKYSEMSQIEAMKKSICNRLICPTAPDTLPCKAFGHRDELILEQCPNLYFCGNAKNFERDKLSENDKEIVLMAIPSFYKTGTVVLVDSQNLESEVVTFEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ18</accession>
    <name>A0ABV2AJ18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Exonuclease activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">REXO5</name>
        <name evidence="4" type="ORF">MHBO_001471</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000365">
        <property type="protein sequence ID" value="MES1919683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031736">
        <property type="entry name" value="REXO1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047021">
        <property type="entry name" value="REXO1/3/4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12801">
        <property type="entry name" value="RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15870">
        <property type="entry name" value="EloA-BP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA exonuclease 1 homolog-like" evidence="3">
        <location>
            <begin position="127"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF15870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="371" mass="43152" checksum="0814BD2DFE13374B" modified="2025-10-08" version="1">MSLSESNQKSQNSTKKQSVWKTTLLRHYSDFFDYRPVDRTKNFGNYNFRQSTNKLVEKSEKIKIDVCDNIDLTKDESVDDDKSTKKTPFKKPIRAKKILKKATKSADSEKAFLVNKSITIKRIPGHEHKAPQKYRQRFAEKLFSVCSTMFQDKNADVLNVVKQVEKSIASKSNSPNAYKQFCISTLVELKRRKSIEWLIKSVSEKSEKIAKDKSELNSNKNVELIDFDKAKKYLMTEEQMIKNGYPQKFMLDLETDWTQFPCTQKKTIFAIKCISKNSEKRLLLCDVNLLLDIEFCFSDKNDLSLKKVQNKLLNIVSNESILIGNGLQEDLKMLKMYHKNVIDISLLKNFEKTKDISVKKMIENFAKMLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ99</accession>
    <name>A0ABV2AJ99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CCR4-NOT transcription complex subunit 1 CAF1-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000373">
        <property type="protein sequence ID" value="MES1919707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032191">
        <property type="entry name" value="CNOT1_CAF1_bind"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040398">
        <property type="entry name" value="Not1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13162">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13162:SF8">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16415">
        <property type="entry name" value="CNOT1_CAF1_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCR4-NOT transcription complex subunit 1 CAF1-binding" evidence="2">
        <location>
            <begin position="873"/>
            <end position="939"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="860"/>
            <end position="887"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="940"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="940" mass="109029" checksum="075A35C832E59F7B" modified="2025-10-08" version="1" fragment="single">NLRMEAIYFIHSQIKTNLNELRKNNVKSIFNALKELTLNYGKEVDVLVLRNLIDDITNLANSDKENEGKTRFVQYFLDKLLAKGPKCFMSTVYGAFKSAHTHPNMLESFFSKTHLSLEKRVLSAMALVRGFDALLKTEGSNYFANAKFYEKLKQSLKNDSVSNRVLHELLYALQKQDMLPMQQREKIVSLIAEMSIKNKNMHKSLNLLIFRQNVFNFKIESRDTKMANLLATMSHPENKNAKIDIAGLANESSIFESVEKLTDFLVKNEKEQSKTAFEVIWAFLCHTSFGKSASKSVVDLSKKTQNSSNSEVPENKNFLLFGKFEKADFDKIESFQLVKIIEKNYENLDWLNLIENFPKTENFGRTENIKLEIGKQKTSRLLDTLLKLIQAMPNPKLCFASFLKLLYGNPWNDRSVHFELIKASLESPKKFSLRTSYQLKNSDKYCAYLLESKRNIKTANEDEKSRFRSLVNPVVLRALLRFEEYREDVRRILMEAARACPVLLFTAFSDIKTTNELKTEAMKAIFDRFLMDGKKSASILFSIDFEMSLRLLEQKFEDSNNSRISINRNASPIFVLCDLTSEITESANWKITAILRMITNKIFSVDFAIRSFENGRFTKFEKWLKLQLENSRNSVMVKNSIFSLLENDRKNQIRLIKQKQSEQTTSLGYKKTTIEMLAAIIDDRHMQNFKSRFSHMSKILVSKRLKNLFGRLHNGSSFGKEVEEIKILSDEDKNTATAFILDEAKEGFPDSGHVYSNEAAKTISHFIGEKSLSRKMHFRLESETITFLRQFGHSTLFTFGATILRAIVRRIESFPLFCHEALRIAEFKTHFPATFKLAKSVVAKTVKKSKIHKKESDLFADRKKKTVDNLKEELAEATKEKITFLLNNLSALNYRETVDFVEEEMCEQFYEYFARYLVCNKVMTEGNFYFVYLRLFRQLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB6</accession>
    <name>A0ABV2AJB6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Cyclin-dependent kinase 2 homolog</fullName>
            <ecNumber evidence="3">2.7.11.22</ecNumber>
            <ecNumber evidence="2">2.7.11.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Cell division control protein 2 homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">cdc2-related kinase 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="23" type="primary">CDK18</name>
        <name evidence="23" type="ORF">MHBO_001530</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="23 24" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.22"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.22"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10216"/>
            <dbReference type="Rhea" id="RHEA-COMP:11321"/>
            <dbReference type="Rhea" id="RHEA-COMP:11322"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43176"/>
            <dbReference type="ChEBI" id="CHEBI:68546"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.23"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="13">May form a complex composed of at least the catalytic subunit CRK2 and a cyclin.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="23">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.22" evidence="3"/>
    <dbReference type="EC" id="2.7.11.23" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000389">
        <property type="protein sequence ID" value="MES1919755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07829">
        <property type="entry name" value="STKc_CDK_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050108">
        <property type="entry name" value="CDK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056">
        <property type="entry name" value="CELL DIVISION PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056:SF46">
        <property type="entry name" value="CYCLIN-DEPENDENT KINASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 20 21" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5" id="KW-0132">Cell division</keyword>
    <keyword evidence="9 23" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0498">Mitosis</keyword>
    <keyword evidence="7 20 21" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 21" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="22">
        <location>
            <begin position="9"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00038543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00039612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00041902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00042858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00048367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00049280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="MES1919755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="334" mass="38569" checksum="DD7F04AAC0F70C6D" modified="2025-10-08" version="1">MQNKTMLKYQLQGKIGEGSYGMVYKAKNQETGELLALKIIPIADEKKGVPTSAMREVSILKYLNHPNIIKFFLFPFNVSDFNVRLANIWRNVVILKKMDQNFNNSQNRVHDVIHDGKQLILAKEYVEQDLDTFIQNCKTQISIKNTKSLLQQLLLGVKYCHDNKIIHRDLKPQNLLINNKMELKIADFGLARIYNVENERSFSNQVVTLWYRAPDILMGSKNYSTSVDIWSVGCIFAEMYLKKPFLKGNSAETQLNRIFKELGTPSKEHWPEMAKLCKINKYNLGTFKKRNLSLKFPSLGNKGLDLLEKMLDCNPKTRISCVDALEHPFLNCKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK0</accession>
    <name>A0ABV2AJK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transcription initiation factor TFIID subunit 11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">TAF11</name>
        <name evidence="8" type="ORF">MHBO_001463</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TAF11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000362">
        <property type="protein sequence ID" value="MES1919674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045127">
        <property type="entry name" value="TAF11-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006809">
        <property type="entry name" value="TAFII28_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13218:SF8">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13218">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04719">
        <property type="entry name" value="TAFII28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TAFII28-like protein" evidence="7">
        <location>
            <begin position="28"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="96"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16752" checksum="AF2857C2213F60E6" modified="2025-10-08" version="1">MDSENFDDSNDSLSDLEDSDYLKKRRIALSNLSKSQNQRYQNFLASKFKPETIQRIVKDVTGANAQKSTAILIGSIAKVFVGEIVEESRILMFSRKDQNNKRKRQDETNDNAVDRDNPIPPDVLKMAFDSIKSKKPKLNFESINFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU3</accession>
    <name>A0ABV2AJU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001679</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000448">
        <property type="protein sequence ID" value="MES1919935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025574">
        <property type="entry name" value="Nucleoporin_FG_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13634">
        <property type="entry name" value="Nucleoporin_FG"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="133"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="19244" checksum="3BAB4192901C69E9" modified="2025-10-08" version="1">MFGQSNSSFGLFGSSQNQSNQSNNAFGANSNQNSASPFTSFSSGFGSTLKKNDNNSNSGLFGSSLGSFGSGSSFGSNSNNSSNNLFGSSSTLFGGNAGTPSGGSLFGNSGNAASYNNSSSLFGSPSNSAFGSSNTNALGNPSSGSNTSSFGGSSLFGSSNLQPQNQNAGLFGSGNFSSNSSNLFGGSSSNNNFGTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJY4</accession>
    <name>A0ABV2AJY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001718</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000468">
        <property type="protein sequence ID" value="MES1919984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="733"/>
            <end position="754"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="760" mass="87861" checksum="446FA3026CF368DE" modified="2025-10-08" version="1">MDYCVHAISVLISLLPEIKLNVNGKITKIKELAKMNKIGDIKIKEIKISEFLANSSEKVVFVEESQFQNLFSNRTNRKVYTDEGCELLNLLESAKSPKTKMFKNFSGLKRVFEKNKKRLSDLVREDIPVMFTFKETLLAIPSKTPVAPNKKKFEQQRVTRSRIKATAKEEQIIVLDDQETPEINKNLFAARKSRDKISKKMALAYFKKTLSAILIYKDKENFSEKRKIVDAPEHKLKMAKISGRERQKTLIASKINISELIEECDKTRFGYSKDCCGCKCHKILVHLEINGRDISCRFCAESHKNECFIFRFVLTCLFKRIQKHIESSSRNFYETQNVLCLFINFSNMIFLVKEHMIKYKLLTRTVKKDTSKLVEKIFSLFFLSFNIDVSDFIDLKTLHRAWKEFLGEEKLVLPEEGWFGKKIERVLARKTFSIEEPPKIYKQRIRALVAQNRVVDALVYSCAVNDIYCAAKCLALLGRIAEAQKCLLALPNLHKDDTIDFTKLFFAHDPKTALKFYSLRRVGSKQPPLQVSEIEWLCKSCTESKAKNGFEKDVIALIKELCASLPPTKAADLKQIAAKLRKFNFSAVEIAIEQSFRKDRKSEERDSVWLIELILNYGADAKNIESFIKNFELVSDYDVSFAAKTTRICEMFVAKEVFWAAEKLGICFLRLYSKHFQRQNKKSAIAYNNYLRSDHKDLVGSVVGYMFKNGKRDNVGESDGADIEDLGQRLKKFLELVFVIKIPDLLFAVFIVVWKIKFSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK80</accession>
    <name>A0ABV2AK80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001801</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000504">
        <property type="protein sequence ID" value="MES1920081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="23412" checksum="FEE4E12326C39898" modified="2025-10-08" version="1">MSNFLVHSSIYLTNEIDFDRTVNFDPSGTAIFNLVQCEYVEEPDSETLKRHCIFMLRSINTVFFCNTTCVVLGSNIQGVAERIRHNLLNGSYLFECLDFNPNADQSEFILGLNVESNFYIYDNTFHPFSMSNVEDKVHLVGPINSKFTVKVRIYEKNSQTVFDFMDQNNIHFCQKYDDWKFSYVLYQKQYVTGRYYLTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK84</accession>
    <name>A0ABV2AK84_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transcription factor CBF/NF-Y/archaeal histone domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001806</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000508">
        <property type="protein sequence ID" value="MES1920087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22929">
        <property type="entry name" value="HFD_POLE4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.10">
        <property type="entry name" value="High mobility group box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003958">
        <property type="entry name" value="CBFA_NFYB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036910">
        <property type="entry name" value="HMG_box_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050568">
        <property type="entry name" value="Transcr_DNA_Rep_Reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10252:SF54">
        <property type="entry name" value="CHROMATIN ACCESSIBILITY COMPLEX PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10252">
        <property type="entry name" value="HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00808">
        <property type="entry name" value="CBFD_NFYB_HMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47095">
        <property type="entry name" value="HMG-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription factor CBF/NF-Y/archaeal histone" evidence="3">
        <location>
            <begin position="88"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19817" checksum="263FD8215C20F5EA" modified="2025-10-08" version="1">MENKEKKKKAIRKKKKSGYTLFIEECSNKDEKMTLKKRAEKWQALDEEEKNDWNRKAKILQKSLEDDKNSLDDLKIKQNKIFVKETIFPLNRVKKIILSDQDVKRVNKEAILLVSKSTEKFIEYLSEKLSLLVEQKQLKTITKKDFDTLIHNDENLEFLKMVWKPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN3</accession>
    <name>A0ABV2AKN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Exosome non-catalytic core subunit rrp46</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RRP46</name>
        <name evidence="7" type="ORF">MHBO_001739</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RNase PH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000477">
        <property type="protein sequence ID" value="MES1920009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="entry name" value="GHMP Kinase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050080">
        <property type="entry name" value="RNase_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953:SF1">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT RRP46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0271">Exosome</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="6">
        <location>
            <begin position="8"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="13955" checksum="C57F1D4A28DECBD5" modified="2025-10-08" version="1">MVGEKIVLRAMSCKQDMSATASGSCLFTAGNTKVCCVVTGPSESTIRDENVDNAVIYVSIKGFETSFIIYVIKGEENKRIESFVYDVLAAVLITSKLPSTFIDFQIRILEDDGSVLVKFASQENLHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL46</accession>
    <name>A0ABV2AL46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002073</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Orn/Lys/Arg decarboxylase class-II family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000649">
        <property type="protein sequence ID" value="MES1920400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="entry name" value="Alanine racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="entry name" value="Lyase, Ornithine Decarboxylase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002433">
        <property type="entry name" value="Orn_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11482">
        <property type="entry name" value="ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11482:SF6">
        <property type="entry name" value="ORNITHINE DECARBOXYLASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02784">
        <property type="entry name" value="Orn_Arg_deC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00278">
        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="Alanine racemase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="PLP-binding barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn/DAP/Arg decarboxylase 2 N-terminal" evidence="6">
        <location>
            <begin position="79"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Orn/DAP/Arg decarboxylase 2 C-terminal" evidence="5">
        <location>
            <begin position="263"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="383" mass="45237" checksum="1999B706A0393AD6" modified="2025-10-08" version="1">MISCPINAVYNFESGDSNLPITKLADFKFDQNSFYNCILDPKILILKKRMNKIKLAKEIIFKNKIDCGLSFLDFRLLFQNISNWSKKYPNLTPFYSLRCLKDPLLLRLLHHLKIGFFCYNLNDLELLEILDISYKSFLYKFKATIMANPWLNYNQILVSLSKGIRYFLVDSEFYLNCIFKALKYFKIKNGVHIGVIMDDMKTINKMAFNAKTANKMADSHNLRVITFDINSNFDKIDNCTFFSNENCNSNISKFILRPILFKVVKIISIRKDVTKKTIKFNYFVDDSVYQNFFHLKTHLNSNPLPFSLKRDFKINEKNYISTIWGRTCDDLDCFYKYIYLPEMSVGDWFLFKNIDFSSLNTFTEFNGYASKRTTFYVIETNMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG2</accession>
    <name>A0ABV2ALG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SET domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002122</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000681">
        <property type="protein sequence ID" value="MES1920457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd20071">
        <property type="entry name" value="SET_SMYD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050869">
        <property type="entry name" value="H3K4_H4K5_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12197">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SMYD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SET" evidence="1">
        <location>
            <begin position="1"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23492" checksum="49C5937C8B5E4CEC" modified="2025-10-08" version="1" fragment="single">KSVLKIKNFIQIDEKNIFSSFDIRKIQLIVQYLFLLYHASTDSLGESSENAFAHARLLNKIFRLHSECSCESLKEEEKRYVASEKIKNLVPRKYSNMINQEKVSEIMSIIDTNSFEVNVSREWRGCGLYLASSMANHSCASNCGFMFKGDGLKLQLIAKEEIKAGQEITISYDSYAETIEDRFNRVLYLSQNYGFLCRCIKCSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV0</accession>
    <name>A0ABV2ALV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NLE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002134</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000687">
        <property type="protein sequence ID" value="MES1920469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012972">
        <property type="entry name" value="NLE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19848:SF0">
        <property type="entry name" value="NOTCHLESS PROTEIN HOMOLOG 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19848">
        <property type="entry name" value="WD40 REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08154">
        <property type="entry name" value="NLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="NLE" evidence="7">
        <location>
            <begin position="25"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="112"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="154"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="23392" checksum="8A77877DA885A7E4" modified="2025-10-08" version="1">MSNETKLKTVSASLSPSESATDNSNWDKFKDKTSNLTLPISSTPKQLNLLLAKLLNNTESDFAFYINGFELATDLEKFLEREKISAEEQINIVFDQKEPLWVRPVTRCSSSLSGHENSILVVRFSPDSKSLATGAGDNTVRLWDLNTEMPRFKLEAHGGWVQALAWSPDSSLLSSGCYSGILCLWNPSNGELIQKFSAHSFYYFGKFHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW8</accession>
    <name>A0ABV2ALW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002069</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC34A transporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000645">
        <property type="protein sequence ID" value="MES1920393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003841">
        <property type="entry name" value="Na/Pi_transpt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF037997">
        <property type="entry name" value="Na_Pi_symport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010:SF46">
        <property type="entry name" value="SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02690">
        <property type="entry name" value="Na_Pi_cotrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="59"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="101"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="18229" checksum="0F1C6560EC2B0E76" modified="2025-10-08" version="1" fragment="single">MEVESLSISLSKSKDKSSNSIEAPVEPPLVTLDEKDLKDAFYKKKSWRNMGARERFLKILKIFLIVLAFCILMIIFFAGITLMSDAFKVLSGYNTRNIFEFASNPMAGLCVGILATVLFQSSSTTTSLSVALVASSVLSVKDAIPIVMGANVGTSVTNTLVSLGHIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM19</accession>
    <name>A0ABV2AM19_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002373</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000830">
        <property type="protein sequence ID" value="MES1920732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15081" checksum="FD1C56EB25AC874F" modified="2025-10-08" version="1">MLSSKLDDKSSWEFLSDETKSLGQKLRVIKKNCKSENRGFVVVKVAFNCHLGIGRLLTRLQSVHNLIKESKLCQMTLVNFKERCTMPHDGEFPHAKELLLDLENVLKELGPLGDDFVLRVSKLTTAVEDILLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM42</accession>
    <name>A0ABV2AM42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002340</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000810">
        <property type="protein sequence ID" value="MES1920697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007203">
        <property type="entry name" value="ORMDL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12665">
        <property type="entry name" value="ORMDL PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04061">
        <property type="entry name" value="ORMDL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="92"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16873" checksum="B11DA040082062E9" modified="2025-10-08" version="1">MILNKNVEFIGTKSFFCFYILLIAITRILLWYMPSSEKYGWTLVGVLHSIITFFMLHWSKGTPSLEDQGKFEDLTFWEQIDYGVQYTKTRKLLTLVPILIFLLATYETDWNKIYLFVNFSILAVLLVAKLPLMYHVRLFGINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM60</accession>
    <name>A0ABV2AM60_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GYF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002246</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000754">
        <property type="protein sequence ID" value="MES1920589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003169">
        <property type="entry name" value="GYF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013085">
        <property type="entry name" value="U1-CZ_Znf_C2H2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02213">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06220">
        <property type="entry name" value="zf-U1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00444">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55277">
        <property type="entry name" value="GYF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50829">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="GYF" evidence="5">
        <location>
            <begin position="135"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="200"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="323"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="217"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="253"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="330"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="343"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="354" mass="41509" checksum="2C5146942CEB4926" modified="2025-10-08" version="1" fragment="single">MTTYWISNPRQYCRDCKTYIDSKPENVRKHEAGAKHQKAMKKRRNMLRDQNYERSATKHGFEKQMELVEKAARDSYKKDSSYFSMFDDQSRFEQQDRFLEMANFSKFPPIPKNEDNFQKFSKGFKPPPGMSSATTPTWLYKDEEGRVQGPWKLSEMILWNASGFFDKEMEVRNISKREMGWLPINCWAEIVGEENVQQIPKQNVGTNSKHKNFPNGDDTKISDKNDSFKNTENVNESTGMGEWTPVPSTLKPENSDNKTKMANSKSEKSKVKKMDILKNDPKSEMSPKILENNEKNKMLNFVRKSRRFEERIEDSDEDLKVLENDSVASKMDRNDVSSEKTQKTQKLKVRRKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM78</accession>
    <name>A0ABV2AM78_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein S20</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002079</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000653">
        <property type="protein sequence ID" value="MES1920407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="99" mass="11769" checksum="FA327CCDE325A429" modified="2025-10-08" version="1">MANHRITKKIQKKHKKISKRKSREKFAKRQMEKISSKIPKTTKKLSKTEKINKNRQKRLENRRFLAKSLKMKLDSPKLAVLIQILDINTNISAKSRKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM95</accession>
    <name>A0ABV2AM95_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CSD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002179</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000713">
        <property type="protein sequence ID" value="MES1920513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052069">
        <property type="entry name" value="Ca-reg_mRNA-binding_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12962">
        <property type="entry name" value="CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12962:SF1">
        <property type="entry name" value="COLD SHOCK DOMAIN-CONTAINING PROTEIN CG9705"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="40"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="132"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="30350" checksum="92B51BC61A4AA754" modified="2025-10-08" version="1">MSDSRKNQVSKIKTNSDSDNNTFKRQIDKETAEKIDKSVEYEGDCSWYNESKGYGFITCSALPCDAWVHISNINSNDTADPANAKLHTGQHCAFQVQLKPCPGAEDSFRVSAVNVFPVLKDGSEEPPKSAKRLSGVCVRFNEHKKFGFVQCAEKGCERLFVHKDQIQGGKPLREGQKVTLELATFKGRTKAVNVIAEKFVEDPLSKDVRKGVVAIFYDDRAFGFVREEDCGETHFFHKENVIGRKDLVEFQEVKFKLRKKMFIKLLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB9</accession>
    <name>A0ABV2AMB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002449</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000886">
        <property type="protein sequence ID" value="MES1920816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15902" checksum="FEB80C2DB372D66D" modified="2025-10-08" version="1">MVNKIKKNKMIEALYIAQKEIIVIDGVVTNRKLLNDIKMLNLIALLNNNKNLPAKYKPFLDNEYKEKLVKIVDSKLKDYFGHKKKPKIKRYYKFLRFSQIRLRKSMTFPAKLEYEDSDYEKKERKKDNKKTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD2</accession>
    <name>A0ABV2AMD2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002452</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000890">
        <property type="protein sequence ID" value="MES1920821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="6895" checksum="F0C33F4678CCE26F" modified="2025-10-08" version="1">MRRTTTESGREFRRWASSESAIEFGSKRPFLLPTARLPTVLMPAIVHRITGTCEDSSASNAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ5</accession>
    <name>A0ABV2AMJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002491</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000921">
        <property type="protein sequence ID" value="MES1920871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046239194" evidence="1">
        <location>
            <begin position="19"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="341" mass="38727" checksum="F71C1D1FCB90BE07" modified="2025-10-08" version="1">MPPFLKLLLLLFLRPKNGECTFENTETQFNVYNVSNFYEKITDESFSIKNGLSIFVNCAKNILYEQIISIGYVILYCDETSLVSQWDYDKTNANYHCDNILPGTKMVMCAISDSSQIYYPHIQSAHKYLPNGLKTSATCKGQEWYTFNVQCMEGENVYTDKNSNLLKYDQICTDLVNCCDPLLVPLPLVPSTYEKTPSSKSLEITCFYDQKKYVLDCENKQFEYGDNQTAVTQDFAYSICGDPELQCDTANVAAPIKVKDGDQKLNNGTKTKAYCSNGASDTEFNLLCENTFWYIEDEESNKVTYINVTDESAKSYCNGAINDKKIAFLVLVLNFVLFLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR8</accession>
    <name>A0ABV2AMR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Anaphase promoting complex subunit cdc16</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">CDC16</name>
        <name evidence="8" type="ORF">MHBO_002544</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000970">
        <property type="protein sequence ID" value="MES1920937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013105">
        <property type="entry name" value="TPR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558">
        <property type="entry name" value="CELL DIVISION CYCLE 16,23,27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558:SF9">
        <property type="entry name" value="CELL DIVISION CYCLE PROTEIN 16 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13424">
        <property type="entry name" value="TPR_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07719">
        <property type="entry name" value="TPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0498">Mitosis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 7" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="repeat" description="TPR" evidence="7">
        <location>
            <begin position="47"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="7">
        <location>
            <begin position="86"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="20036" checksum="19D97CD56446774F" modified="2025-10-08" version="1">MSAYRTANSIMPGAHDPNLYIAMEYISSKNIPRAKFFLDKISTETDPFVLNEWGNYYYKNENYEKAKIMFQKAISLIEHFGFKNWESVLFNLGNTLIKLSQYEAARKVFKRSLIYCKKQNKSSVLCALGICCHFLKDLEAAILYYNKALAFDDKDYAVEYLLEIAILNKMKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW9</accession>
    <name>A0ABV2AMW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002481</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000912">
        <property type="protein sequence ID" value="MES1920859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="71"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="175"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="330"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="496" mass="57707" checksum="CECDED8428E583EC" modified="2025-10-08" version="1">MEEAKDALLVSLSAFEKDILFKNNDSPTNRILANYKILGQDGEEKPFMIRYSSLLKQYNRLKKKSENDTSEEEHAEKLNAKQSKIRKLQNSILKIDSKQQNYEEQLGDSTNRKPFENLENTKISEYKTMKTELEKLKWENRRSKKLEESLNSLIVKKNELSFDDQKSRERIAILKEKTSELKKREIEHLDEIERQERVLEAINESLEKDRFFIEGKKISLNESVSAEEAKFNHLIKSFHILRSKIKQLRNEISQAVSRKDHFAVFAEKVETEEKRRKKPEHLGKISQVKHRQFQASEHSKNLLSTVLKIAKFAQAKSDSLKDINSYNAFLKEAKIGRKKYKTQIASAKQDVAVVLAERLRVKAENEKRQSEILSSRNTTNRKIGEAVAELRAKSAEVAKRIYIFEKIATSPAKTLARDCAECGKENVFRIDFEERTTRFLCSNCQTNLAEIEFSENLRFSNKKRKVGKSDRKSKMATNKVKMGKCSVIKNEKLRCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE7</accession>
    <name>A0ABV2ANE7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Eukaryotic translation initiation factor 3 subunit G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">EIF3G</name>
        <name evidence="5" type="ORF">MHBO_002517</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000942">
        <property type="protein sequence ID" value="MES1920903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10352">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="196"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="16"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="16"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="35095" checksum="7157F09D55D1CAEB" modified="2025-10-08" version="1">MAEKKKIDLTQLAMRIKEKKNGPASPDEKNANPDKTTPKKKISLEDLYKKTSQKNNNVTENYPQINTVYDEKNDLYTTTTIKLENNKRIKEIVRYRLKKEKTTIKRFALNRQKLLEQKFGDPKIRENYAPTESKVKFNLESKKANISTSRFRDVIACANCRGVHFTHQCTSNKKRVFGAERREERPDFFKEEDHSPVIRVNNFPEETTPDDLQTLFRQFGQIKKVKIAFDYKTQKSRGYGFVTFVNRAEAEEAMKVVQNHRYGRMVLNLEWGKTRFELKKDREEREKKKGFVRRFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN3</accession>
    <name>A0ABV2ANN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Serine/threonine-protein kinase plk1</fullName>
            <ecNumber evidence="8">2.7.11.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">PLK1_2</name>
        <name evidence="8" type="ORF">MHBO_002825</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.21" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010001208">
        <property type="protein sequence ID" value="MES1921272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13118">
        <property type="entry name" value="POLO_box_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1120.30">
        <property type="entry name" value="POLO box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033701">
        <property type="entry name" value="POLO_box_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000959">
        <property type="entry name" value="POLO_box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036947">
        <property type="entry name" value="POLO_box_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24345:SF0">
        <property type="entry name" value="CELL CYCLE SERINE_THREONINE-PROTEIN KINASE CDC5_MSD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24345">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE PLK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00659">
        <property type="entry name" value="POLO_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82615">
        <property type="entry name" value="Polo-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50078">
        <property type="entry name" value="POLO_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="POLO box" evidence="7">
        <location>
            <begin position="213"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29449" checksum="0A917A4DB8928E24" modified="2025-10-08" version="1">MLQHNKKGHSFEVDVWSLGVIMYTMLVGRPPFETEDVKDTYNRIKHNLYRFPEDSTLSEVSKNLIRKILQVCPDSRPTLHEIRVDKFFTTALIPRNLPSSTGSGVPVITNFKESISKSAQEYGKEESLMEASSERKPMVEKVKDGRLSPKSELFRSAVYSRRARNSFGMSGEMAKTTRSEPKISKQIDNLEKDYKRFSLEQDEESDLYEPSVWIECWIDYSSKYGIGYILSNGIYGALFNDNSKMLLYSDRKFFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP26</accession>
    <name>A0ABV2AP26_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha tubulin suppressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ATS1</name>
        <name evidence="3" type="ORF">MHBO_002961</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001342">
        <property type="protein sequence ID" value="MES1921430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051553">
        <property type="entry name" value="Ran_GTPase-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45982">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45982:SF1">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13540">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="RCC1" evidence="1">
        <location>
            <begin position="1"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="78"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="84"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="109"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="19116" checksum="2AD7A9A0B2AF66EB" modified="2025-10-08" version="1">MFGSNKSGQLGLALESGLDCISYPTVVPGNFSVSNLCCGSNHSVILTEDRRVLSAGSNMESQLGIVSTKDLAPKPKVLSSAPAAKEKSKQLRKEKSKQLRKEIGKRGVSPTTRINSSTLGKNSIMEPEELTPVLPPTFFVSVFTELEFFRDKKVAQIICNGNSTAILTKKTWIADAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC9</accession>
    <name>A0ABV2APC9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">methionyl-tRNA formyltransferase</fullName>
            <ecNumber evidence="1">2.1.2.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003052</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.9" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001443">
        <property type="protein sequence ID" value="MES1921526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08646">
        <property type="entry name" value="FMT_core_Met-tRNA-FMT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041711">
        <property type="entry name" value="Met-tRNA-FMT_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11138">
        <property type="entry name" value="METHIONYL-TRNA FORMYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11138:SF5">
        <property type="entry name" value="METHIONYL-TRNA FORMYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="Formyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Formyl transferase N-terminal" evidence="2">
        <location>
            <begin position="72"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="377" mass="43595" checksum="CA3C40B61488FF3A" modified="2025-10-08" version="1">MGKKVMFFGTDYIAVKALSALFDAKNIVKSLKLIAPHSQPQKQLSTIDFATKNNIDFIKLPPKTKFDLSNFYLPKHGYDIGVVVSFGYLIPKDIINSFKYGMINLHPSLLPKYRGASPIQNTILNNEAETGVSIIQISPQIDCGSLLYQQKTKIHQNETFWPLYRRLSEKGAQLILKAVENAENFNKIAKPQKNVNPQQIEPKEEENFYKKSYSKFSKRSGHISFVDSDRKSVYNKWRAFYEYLPVVAFYKFAKKRKRFQIFKAFLPENKFRLAKDFDKMNEKIRLKSGHLSAGKAIFLNKKDSRLAGGCLLVKCKCGKMMGIENMKTNVNVIRADDFINGFSDNRSEIDFYFFNFFRGFFEDFFRLLSIPSFFSIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE5</accession>
    <name>A0ABV2APE5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">STK11</name>
        <name evidence="12" type="ORF">MHBO_003082</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001474">
        <property type="protein sequence ID" value="MES1921552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd14008">
        <property type="entry name" value="STKc_LKB1_CaMKK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43895">
        <property type="entry name" value="CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43895:SF32">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE CHK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="61"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="359" mass="41210" checksum="A9EB275B9044751A" modified="2025-10-08" version="1">MRQNDKTVSFKSQTFHSNSDKRYVKSLKLASPRSFDLSEDIFLNGTVLQNDSPKKDCLENYKIVRVLGEGTFGKVQMATCNRDGKRVAIKIVDTRRLRRIKNGTSNLEKEVFSMSKIKDKNVVELYEVLRESDGNKLYIVMELLEGGSLADLLKKEKSLNEERARMIFRQLIEGLESIHSKGIIHRDIKPSNLMLSLDAVVKIADFGISNVLKKESAMYGLIKNHFGGTPSFIPPEHFTGPEYISGFKADIWAAGITLYNMVTGSVPFNGRNLYELYQNIEKGKFSAPEYLSRELKDFIMQILNPNPNHRISISEIKKHPWYKMNKITSEDFIIDPKKNRFIFEQLSNRKNNPKFLNSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF0</accession>
    <name>A0ABV2APF0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA replication licensing factor MCM5</fullName>
            <ecNumber evidence="1">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MCM5_1</name>
        <name evidence="4" type="ORF">MHBO_002881</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the MCM2-7 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the MCM family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001262">
        <property type="protein sequence ID" value="MES1921344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1640.10">
        <property type="entry name" value="mini-chromosome maintenance (MCM) complex, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008048">
        <property type="entry name" value="MCM5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027925">
        <property type="entry name" value="MCM_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033762">
        <property type="entry name" value="MCM_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF42">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14551">
        <property type="entry name" value="MCM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17207">
        <property type="entry name" value="MCM_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01661">
        <property type="entry name" value="MCMPROTEIN5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM N-terminal" evidence="2">
        <location>
            <begin position="41"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="MCM OB" evidence="3">
        <location>
            <begin position="136"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU368063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25387" checksum="1D8FE9A447A9F91F" modified="2025-10-08" version="1">MAHVFSEVTSAATYSDQRLGAETSEAFKRNEQIKQDEAICYKFIEEWRKDESFIYRERVKANYRSRKPELTIDFSDLSAFDKSLSDRLAADPNSLLSLLEKAALKVVAETLIPRPKEEDLRPIHIKIENYGRSESIRALRADHINRLVEVNGIVTSAYKVQSKATKIRIKCATCNDARDLACPKGFGSAAVPRVCSSMVNGSSDTLFLFLAKIFCRFFVVFCRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF6</accession>
    <name>A0ABV2APF6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003072</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001469">
        <property type="protein sequence ID" value="MES1921545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050173">
        <property type="entry name" value="ABC_transporter_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24223">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="234"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="287"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="44"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="313" mass="34755" checksum="8A18D361704C95D1" modified="2025-10-08" version="1" fragment="single">IQNATIRDNILFGNEFDKKWYTKVVQSCCLAEDLKMIKGGEFAEIGERGINLSGGQKQRVSLARAIYSRKNIYLIDDALSALDPQVAQKIMNSCIKDLLKNKTVIFSTNAVDFYPLANKLILIENGKITKFGAFEQIKESLENAFSSDKNETRRDENDLTEEKVLEKIDDTKHEIEFSGSRSRIVSISGTGIENSVSFEAVSGFEEGAHNSEGKLIDREKKETGAIGWKVYKNYIMANGGILMVLVISISFALRQGSDFGVKRFLAFWTDKYAGNNILPENEVTKNILLYAAVSLAAVIAIAFNAFVHVIGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF7</accession>
    <name>A0ABV2APF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003094</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001485">
        <property type="protein sequence ID" value="MES1921561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="12010" checksum="9C7C5F267D4BA9C5" modified="2025-10-08" version="1" fragment="single">MSTAIEKNKKQKIENKKPPATDTKSNVERRNDYLKNISNGPKETRKSRKRSARLSDRIEELFNSNIYSNDVESHKNIFKYPRKHKTDDKKSSRNNKNERIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API6</accession>
    <name>A0ABV2API6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003122</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001526">
        <property type="protein sequence ID" value="MES1921591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="20337" checksum="0A1554D1E5B077BF" modified="2025-10-08" version="1">MTKRKKNRKSTKRRKKKSKKGKSKTCQNLINAKNIDKKKTNRNKKDQNEKEKTDGDKQKEKQKNVKEDNDKILDVIKKEEDRIKEEAKIFEEEKLKNRVEALKKMDLLEDDYLERVGREKSEFDDELATEIWLLRQELQEQIFLNSQIKKMLLVTIDEDKFSKVFYKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ3</accession>
    <name>A0ABV2APJ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Fructose-1-6-bisphosphatase class I N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002975</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">Carbohydrate biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001354">
        <property type="protein sequence ID" value="MES1921444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.540.10">
        <property type="entry name" value="Fructose-1,6-Bisphosphatase, subunit A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.460">
        <property type="entry name" value="Phosphofructokinase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000146">
        <property type="entry name" value="FBPase_class-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033391">
        <property type="entry name" value="FBPase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035966">
        <property type="entry name" value="PKF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556">
        <property type="entry name" value="FRUCTOSE-1,6-BISPHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556:SF1">
        <property type="entry name" value="FRUCTOSE-BISPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00316">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56655">
        <property type="entry name" value="Carbohydrate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53784">
        <property type="entry name" value="Phosphofructokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fructose-1-6-bisphosphatase class I N-terminal" evidence="4">
        <location>
            <begin position="248"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="398" mass="44812" checksum="CF41741891ED2F2A" modified="2025-10-08" version="1" fragment="single">MEINFELEVKRLRDIMSKIGCVNIFVSEGACVPMITKQLENSGKKVERDQSGNIRLSNINVGEWIAKNFGPKIGSEKNVTVKSGYFCRAAAADDFDKKLIKNCCKIAVKEAIKKSTGIIGPNENKNDQIELIPLEHIKGGRKFDINQKWFSEMMLDIGQPFKFDDGYVRRKTLNSRKISVFSAKKNPIRNKGLFTDKKELSSIETELSNEVNFASRSSLSLLHSSDREEYLFKNLINKFSGLEISDAVNLNEVIERLMVSFKFLSEQIIKAGVLGDHNDKNTFKMLSNVAENTIRSSLQSLHSVKNINFRAEKFPKNSKNLDENFSKFDIYCDALDGESNIKANISTGTLFGIYRNDSSMLPKCNKIVVSGYCLFGTSVILSIAFPNRVVSFKLNQSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM1</accession>
    <name>A0ABV2APM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002932</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001314">
        <property type="protein sequence ID" value="MES1921401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="87"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11369" checksum="3BBB76958F7CE563" modified="2025-10-08" version="1">MKITKEEKSAKYRKQTETGMEQTSAIQTTTTRSTATRPTESSKKTFNLTNDNKRRRRKTRKRRNVHGTKSKKSVSKRPEKGVWERIKKAKVFRKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX1</accession>
    <name>A0ABV2APX1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cleavage and polyadenylation specificity factor subunit 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Cleavage and polyadenylation specificity factor 100 kDa subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002914</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001295">
        <property type="protein sequence ID" value="MES1921382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="entry name" value="Ribonuclease Z/Hydroxyacylglutathione hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027075">
        <property type="entry name" value="CPSF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45922">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45922:SF1">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16661">
        <property type="entry name" value="Lactamase_B_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Metallo-beta-lactamase" evidence="2">
        <location>
            <begin position="22"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="11694" checksum="D37C06440890A5E0" modified="2025-10-08" version="1">MTDKTSLTPLYGLGPYEPLSYLLEFGGCRILLDCGWDSRFNDSDISGLKLIGNVDCVLISHSTLQHLGALPYAVAKLGLSCPVYATLPSLNLKFNAVSNELRNNLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ88</accession>
    <name>A0ABV2AQ88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001503">
        <property type="protein sequence ID" value="MES1921578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19855:SF11">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN WDR12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19855">
        <property type="entry name" value="WD40 REPEAT PROTEIN 12, 37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="146"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="308" mass="34429" checksum="06439A2DBD4E2727" modified="2025-10-08" version="1" fragment="single">EFLQDGKPLICGDFSGKLNVAKMTRPAQKNNVVFETNSHSIKDLHILSQNNDTADIITSGRDFSLKLWEYQITQKTMHSLQTFKTAGNCHSIQSRNDKIITGGTENAINFYRFEKIRPISAEDKKIDESRNEESSEEHLKHVFRIEKAHEDCVSSVCFSSEISFCSGSWDRSIKKWDVGTEKAVSAFDSEDVVTCLNFDGQTGLMASAHASRGVCLWDLRYSKSENPVFSLRADCWQSSVRFKSTNVVVSCGHDGLVRFWDLRACADEEAAVLVAKKKKKLFCLGVCGDAEIAEVAAGGEEGVFTWKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF5</accession>
    <name>A0ABV2AQF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003434</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001919">
        <property type="protein sequence ID" value="MES1921903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="18534" checksum="772E6A1E60A235AF" modified="2025-10-08" version="1" fragment="single">MNVSVNLPVIKDVRIDLFKRPQEYIQNLVYTKAQNDLKNLLHESHLEFILTGEDQLTKSAPSVADETTKIDADNAAAIAALSSAIYAKFLTVPENNTDSEFAEQIKPTGKQGTGWLYGASVAGTEGLDYAQVAQELLRNNSHNPPRLAEHFEINNIQAKVYLLLKDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP2</accession>
    <name>A0ABV2AQP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003516</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002038">
        <property type="protein sequence ID" value="MES1921993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="6954" checksum="580D24195E687BDD" modified="2025-10-08" version="1">MSCLVISCVLTMFASKISYQRHWDTKHNTSSFTVLSCPAVLPVVVGLTLDITYVCCIISSTIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ7</accession>
    <name>A0ABV2AQQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">26S proteasome non-ATPase regulatory subunit 13</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PSMD13</name>
        <name evidence="3" type="ORF">MHBO_003340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001795">
        <property type="protein sequence ID" value="MES1921806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054179">
        <property type="entry name" value="PSD13_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035298">
        <property type="entry name" value="PSMD13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10539">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10539:SF0">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22037">
        <property type="entry name" value="PSD13_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0647">Proteasome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PSD13 N-terminal" evidence="2">
        <location>
            <begin position="12"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF22037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="20202" checksum="7231979D0B1FD7A0" modified="2025-10-08" version="1" fragment="single">QEFKTSFIDKIQPAIKHSPEALFLIEVTDIKIDFLTTDFNFVDEHLHETSQTLSKHLQDFKNPTKAYFYRVRMEFYKHYDMSTEFYETALSYLRYEDIESLRPNDRLILGTDICKAALVGKIYAPEKLINHPIITDLQQTAEKWLYVALKAMNECDIEKFEAALFNDQVFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR18</accession>
    <name>A0ABV2AR18_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Envelope protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002186">
        <property type="protein sequence ID" value="MES1922077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="75" mass="8140" checksum="10737F68EF546965" modified="2025-10-08" version="1" fragment="single">GVDNLLDMPKENVTKLGSLTQTYHVCTCENHNTGNSNGATTVSNKATCSTGKTVNCNIFKTKKVETTNACFVRRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR71</accession>
    <name>A0ABV2AR71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003696</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002349">
        <property type="protein sequence ID" value="MES1922180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="26541" checksum="A58B5A81E9FF819E" modified="2025-10-08" version="1" fragment="single">KIKKIKLAKNRQKNLNFLNPLQKRLHSKGPRLRHRQIDFEAQRHPYFDLLPRLVIRQLEKDVALAPPTFHYSYPPRVDRRHQLHAVAQHHPPRSHSRRQRLHFAVRARAEINLFARKHRQIGRPNRVTAQNKTFLNFFFRVFKPFFGFCVAIVEQNRSGSFSAVEMGYVAAAQAQRFYLFVLFAAAAAKSVFVTVSGAARAVPRLKSFFFRNWTSLGLFKIYFFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX4</accession>
    <name>A0ABV2ARX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RNA splicing</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">RP9</name>
        <name evidence="1" type="ORF">MHBO_003940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002779">
        <property type="protein sequence ID" value="MES1922428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034585">
        <property type="entry name" value="PAP-1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35252">
        <property type="entry name" value="RETINITIS PIGMENTOSA 9 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35252:SF1">
        <property type="entry name" value="RETINITIS PIGMENTOSA 9 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16869" checksum="B9ECECF1FBC60686" modified="2025-10-08" version="1">MEYSELKRSKGYKDLLEEKSEIGVKRKNYGLRKSDSKEERIKSAEHIPDTKENREVKRFLEKAPSKGLFQPLGKEVKIMQCWRCKNFGHRAADRECPFSEKGNLILDSERKLREDPILKKSKKILKNKKKSKLRSVLSKYLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY5</accession>
    <name>A0ABV2ARY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">RNA helicase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003934</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002768">
        <property type="protein sequence ID" value="MES1922423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057479">
        <property type="entry name" value="PRP28/DDX23-like_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25430">
        <property type="entry name" value="DDX23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="9">
        <location>
            <begin position="145"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="176"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="7">
        <location>
            <begin position="145"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="328" mass="38180" checksum="82677D96233A7B78" modified="2025-10-08" version="1" fragment="single">YLGRKKREKRVIPLDHRQRFNFDWEPTEDTSVDPNELYAKKADVSLAFGRGFVAGVDREAQKTRNSAFLEMLRKHKAREPRRMARIIERKEERIRRLKEKRLARKSAHHLWKHKKLEDMTDRDWRIFREDFGISTRGIGKFTPIRYWEESALDKRIKEELRRARYRDPTPVQRMAIPIGLARRDIVGIAETGSGKTCAFVIPMLEYILKLPPLTPQNSADGPYAVILAPSRELAEQIERETERFAKPLGVRTVSIIGGVLFSFNCIFEILQNCVFVSAKNAKIVVLSCLTNQFFGYRCDFLFKLQFCAKTKSCLSVLNKVRTDCVINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ6</accession>
    <name>A0ABV2ARZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003767</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002479">
        <property type="protein sequence ID" value="MES1922259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046435936" evidence="1">
        <location>
            <begin position="20"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16409" checksum="95269F2AF3CF2F7F" modified="2025-10-08" version="1">MAFIKFIFVLLSAITFVKNDNDNTEINAETSTNHNRSSIPSIQNPYICNVNDIPDGFKDYWQNYTILNDINVAKNLIRRWFLFDVDNNYMPILHFYCVDGKYAHFVNIRDYEPFGYALCVNGHFLPPPLCLDLPESESESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS48</accession>
    <name>A0ABV2AS48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cleavage and polyadenylation specificity factor subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CPSF1_4</name>
        <name evidence="2" type="ORF">MHBO_003985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002893">
        <property type="protein sequence ID" value="MES1922467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050358">
        <property type="entry name" value="RSE1/DDB1/CFT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004871">
        <property type="entry name" value="RSE1/DDB1/CPSF1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10644">
        <property type="entry name" value="DNA REPAIR/RNA PROCESSING CPSF FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03178">
        <property type="entry name" value="CPSF_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="28007" checksum="5B9B587AFB61EC73" modified="2025-10-08" version="1">MLYYWNGTHLIGCAFLDLQFFSTRIVSLRNYLLVGDAYRCIYLLLWEPQTRQLLMMSRDASKQNVTSAEFLINKSSIAFFTSDGDRNLKILNYDPKNPKNRGGKSLEQIAHFRSGHFITKSVMLKAKKSEKKFFVLSGSVDGSFVVTVPLEEKIFRRLKSLGTIMTYYLEHNGGTNPRMFRKSVHDGHSNYQNFFIDGDLVDKYRHLDMYRQIELARKVKSSRKEILEKLRFIGELTRFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST0</accession>
    <name>A0ABV2AST0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Flavodoxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004147</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003276">
        <property type="protein sequence ID" value="MES1922629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001094">
        <property type="entry name" value="Flavdoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00258">
        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00369">
        <property type="entry name" value="FLAVODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="Flavoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047418573" description="Flavodoxin-like domain-containing protein" evidence="1">
        <location>
            <begin position="23"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="Flavodoxin-like" evidence="2">
        <location>
            <begin position="94"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="17798" checksum="9DEB19E0D3857BAE" modified="2025-10-08" version="1" fragment="single">MDFYIVAIPVLLLLIVKPQISAKILQIPKIVIIKVTAIFEFKKKNDKKIEKNDQKINQFLPENDQKIEKNDQKSNLFLSKNEVFEQKNDKTDQITIYYGSQTGTAEGFAYDLQNDMSSIGYSVKVVDIEEYETKNFLDKKFSVFIVATFGDGDPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT36</accession>
    <name>A0ABV2AT36_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">5-formyltetrahydrofolate cyclo-ligase</fullName>
            <ecNumber evidence="5">6.3.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004272</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(6S)-5-formyl-5,6,7,8-tetrahydrofolate + ATP = (6R)-5,10-methenyltetrahydrofolate + ADP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10488"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.3.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.3.2" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010003581">
        <property type="protein sequence ID" value="MES1922749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10420">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002698">
        <property type="entry name" value="FTHF_cligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024185">
        <property type="entry name" value="FTHF_cligase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23407:SF1">
        <property type="entry name" value="5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23407">
        <property type="entry name" value="ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01812">
        <property type="entry name" value="5-FTHF_cyc-lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00036539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00038966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12487" checksum="0E1480C4D8ABD4E0" modified="2025-10-08" version="1">MSVKLLKSAMRKKTRSVVSTLNEKNMTEQSKSVFKILTESEIFLKSKIIGIFISTYKELNTLKIIEKALNLQKEVYCPKTHFSPEKLSFHKINSVNEIKNFRKTKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT66</accession>
    <name>A0ABV2AT66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004303</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003687">
        <property type="protein sequence ID" value="MES1922779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14768" checksum="8DFC0559B378C5B4" modified="2025-10-08" version="1">MISRFTYPMPFRMFYVNGSKVSYKEGTPFLTALVVSQSSEVPPVLWIPQEQVFYRGENGLLSQHKKIKNASVQSSTQIKEVENRFKFFYAKVDTNNPLKLGLANRKFFGEIAGCRKLPSNYSLLVSTME</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA7</accession>
    <name>A0ABV2ATA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uridine-cytidine kinase 2</fullName>
            <ecNumber evidence="2">2.7.1.48</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">UCK2</name>
        <name evidence="2" type="ORF">MHBO_004400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.48" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003938">
        <property type="protein sequence ID" value="MES1922872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004849">
        <property type="term" value="F:uridine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006083">
        <property type="entry name" value="PRK/URK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10285">
        <property type="entry name" value="URIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00485">
        <property type="entry name" value="PRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00988">
        <property type="entry name" value="URIDINKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phosphoribulokinase/uridine kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="16122" checksum="5DFB22933A7B5FCB" modified="2025-10-08" version="1" fragment="single">GEKTDIPIYDFVNYCRSKETRQVGPCQVLIFEGILALYDEKIRNFADIRIFVETDSDICLTRRIRRDMKERGRDLETILRQFNLFAKPSFAKFCLPTKDFAHLILPNSFRNPIAIEILGLYIRTKLEKTREQNFRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE4</accession>
    <name>A0ABV2ATE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004471</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004097">
        <property type="protein sequence ID" value="MES1922940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15009" checksum="257D99C6A547358B" modified="2025-10-08" version="1">MYIPNRNSLDEEPRKPKYCGVPSVIFVPKRVEIPQKYYIEALRSVVKINDEENVENPKIMLSSPQGAFNGDKIMKEVNETLFVESKDQSIDFIWKHKRQCDFSRFKDVIEHSSVEKFNNFLGYQYKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF4</accession>
    <name>A0ABV2ATF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Class I-like SAM-binding methyltransferase superfamily</fullName>
            <ecNumber evidence="5">2.1.1.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SMT1</name>
        <name evidence="5" type="ORF">MHBO_004293</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.41" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010003641">
        <property type="protein sequence ID" value="MES1922769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003838">
        <property type="term" value="F:sterol 24-C-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050447">
        <property type="entry name" value="Erg6_SMT_methyltransf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030384">
        <property type="entry name" value="MeTrfase_SMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44068:SF1">
        <property type="entry name" value="HYPOTHETICAL LOC100005854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44068">
        <property type="entry name" value="ZGC:194242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51685">
        <property type="entry name" value="SAM_MT_ERG6_SMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM-dependent methyltransferase Erg6/SMT-type" evidence="4">
        <location>
            <begin position="57"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14285" checksum="1355B58CAE255EEE" modified="2025-10-08" version="1">MISEWLRHFFSCFKRNSDKDYFSVASSYLGFFKKADDNDDTNRDLRSEKRTSITNSYYDLVTDFYELGWGKSFHFAPRHNEETLRESITRHEFYLCYKLGIDKNEHVLDAGCGVMGPARLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG7</accession>
    <name>A0ABV2ATG7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribosomal protein L14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004487</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004147">
        <property type="protein sequence ID" value="MES1922956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00337">
        <property type="entry name" value="Ribosomal_uL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="entry name" value="Ribosomal protein L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01367">
        <property type="entry name" value="Ribosomal_uL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_uL14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_uL14_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761">
        <property type="entry name" value="50S/60S RIBOSOMAL PROTEIN L14/L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761:SF3">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL14M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01374">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="Ribosomal protein L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="145" mass="16457" checksum="5487F07F1C82AA65" modified="2025-10-08" version="1">MFALTKSRCRSLPFRSFLVKMASRTVVTMRCGTADNSGAVLVRVIGNIGRRANKNPKIGDICTVTVREALNSKDSKVKRKDVVWAVLATSKKNFRRKDGSHIRSYRNSFVLIDKERKPIANRILYPVARELKKYKFVGDKAEVLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN3</accession>
    <name>A0ABV2ATN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004504</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004199">
        <property type="protein sequence ID" value="MES1922974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="47"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="24345" checksum="8CDA5734EDE63788" modified="2025-10-08" version="1" fragment="single">IFRHFCNYSVNFSSVIPLLNKVEEYPKDDQNSLNDWAKEFRQANLDKQKFRKSLLETKENIEKLLEALKEKKEEQIYFDIPFPVPDTTLPESERPKQKEMNAWSRERMELLQAIDENSAELGMQYQLTETLRQENGEIKLKLKLLANKVKAKSIKLSLYRKMEDSFSSALNSELVLPVEGESDGFKRIKDKKAIFMFFRHLKWSNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP4</accession>
    <name>A0ABV2ATP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003564">
        <property type="protein sequence ID" value="MES1922747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13524" checksum="32F35BF187588BFF" modified="2025-10-08" version="1" fragment="single">KIFYEQMKVLRDSYNEGDNILIGNVTMTVGILCFSFPSKSGYFLHHFAKEFLKALERYPFSREKTIAIKGVLMTANKSPKTFLFCFGTFCKAVILFGIKDFEIKNAVLQVINMYRIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR1</accession>
    <name>A0ABV2ATR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004592</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004498">
        <property type="protein sequence ID" value="MES1923058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11808" checksum="97C07FCD0AAB5384" modified="2025-10-08" version="1">MRENINPEIQNKNIKESLWGYRKESHCHLYYLAYILALFKINDSVVGYDNDFLYSFEDTYYEANSKKLKIQCPTRKLKLSNSLQTQKSMSFNFCFRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY8</accession>
    <name>A0ABV2ATY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">THH1/TOM1/TOM3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004653</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004724">
        <property type="protein sequence ID" value="MES1923112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="142" mass="16758" checksum="5D4D63CC58156890" modified="2025-10-08" version="1">MEMVVALFCWKSVSHPWSSSFIQDPEDNDLTFHNFFKKGTLLLILNICYVLFVLLMEIFVIRNIDDNTWTKDPKLVVKTQSYSIILALIVARTTYLMYRRLYSKEIATSFMFYFCFVFYLCCSMIIDIQDMSTSHKVLIALK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU20</accession>
    <name>A0ABV2AU20_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TF-B3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004666</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004770">
        <property type="protein sequence ID" value="MES1923124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="179" mass="20728" checksum="6E2AFB414CB92138" modified="2025-10-08" version="1" fragment="single">MAVNVVLLKNHRHDLVQQLHIPRLFGVVTRIKKLSSMEMPSFLPEHLHVSTLEGFIYFRHTYMKSVLKAGKKVLKDDELVGSYARFDDKSFARDCASIKKGDKVSFRLCYSQNGNLAVREIRFLEREQNDFCGEEEFANPSKLTNEKESTEVVLVPFVSAEKKAKLEQNFRKKNVYGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU65</accession>
    <name>A0ABV2AU65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004752</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005108">
        <property type="protein sequence ID" value="MES1923209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="21776" checksum="49C0CA9550C27417" modified="2025-10-08" version="1" fragment="single">MGTPDMKLRITGADGKELANNSMESITSSLTQGLKPYNDFSGMIQTMADKIDVSDTTKVEFEGKNMKTIKATDVPQTMKTIGAYVNNMIGSDDSDRMRELLNNGNYGDTPKEVRKNMSNTIFDMVKKTNDVKIANNPQAKAIQDKKNNQMASTSISDILRGAEVPSGSLNSQPWNDTIKMKNKKGEIVEVSGAKVKGTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU73</accession>
    <name>A0ABV2AU73_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SNF2 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004506</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004210">
        <property type="protein sequence ID" value="MES1922976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050628">
        <property type="entry name" value="SNF2_RAD54_helicase_TF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45626:SF17">
        <property type="entry name" value="HELICASE-LIKE TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45626">
        <property type="entry name" value="TRANSCRIPTION TERMINATION FACTOR 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SNF2 N-terminal" evidence="5">
        <location>
            <begin position="1"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="25116" checksum="66CCA9D663E1482D" modified="2025-10-08" version="1" fragment="single">AHKIRSRKSKKHKAICSLWTDRRWCLTGTPVQNKLDDLYSLIRFLQVHPLVNIRFWKSVILNPLKTQDPEGLKKLWTLREYILLRRTKSSKINGKPIVNLPKKYHRNIILNFDEDEQNKYDLLSNLGRKSINRAENQFGKSNVFIFAILTRLRQFCCHPQLLPDNYINQIEVQSSLPVGTNSVSEALEEILDGETICFLCKSPAHDPCVTACFHVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU77</accession>
    <name>A0ABV2AU77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA excision repair protein ERCC-6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ERCC6_3</name>
        <name evidence="2" type="ORF">MHBO_004748</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005081">
        <property type="protein sequence ID" value="MES1923205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050496">
        <property type="entry name" value="SNF2_RAD54_helicase_repair"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629:SF7">
        <property type="entry name" value="DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629">
        <property type="entry name" value="SNF2/RAD54 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16927" checksum="D2BEDBD805A15A54" modified="2025-10-08" version="1" fragment="single">GLGKTVQIAAFISGLNLTEPNKLFLILCPATIIEQVLRSILKWSVELKKWCNNCKIMLFHSTICENEISTKSKIEKMENGIVVSSYGMFLVNNKFFRFRKKNFDYLILDEGHKIRNVDAKITKSVKKIKTSHRLILSGAPVQNNLKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA7</accession>
    <name>A0ABV2AUA7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rho-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004786</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005256">
        <property type="protein sequence ID" value="MES1923241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00159">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044785">
        <property type="entry name" value="RopGAP1-5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23177">
        <property type="entry name" value="MKIAA1688 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00324">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="2">
        <location>
            <begin position="43"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25446" checksum="1B11E2B98C92574F" modified="2025-10-08" version="1" fragment="single">FVKKRKNSFDMLEMSTRTHSNSALEQPRGKQFGVDIFDLFGTTKLPNLNARIPTVVIRMADYLFKTKGHLKEGIFRIAPEQTECAIVMKQLDEGTFTHCEDVHCVANCMKVWFRSLPQPLINQTLLELIAEREEKETFEDVLTKGLEEPNLSLLQWLLKFLSKVAKHEKVNRMSAKNLAIVFSPNLVEVIKVEAISASGSVTSFLEESICNLMKRKKSVLEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC5</accession>
    <name>A0ABV2AUC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004811</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005375">
        <property type="protein sequence ID" value="MES1923267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="17666" checksum="1BDA1B8D8E8B364D" modified="2025-10-08" version="1" fragment="single">KKEPFALFESKEGEQQWIREGENIPKGFRKATSGTIRGTDLAYAVGPDGKGQYLSKTTQLPEGYSWSTPAAQEKLDKEIKKGKTAEAQKKFYAGVVVDDIGRAKNLIETAKFPATGFFGAQAAKIPGTAAHDLDAILDSIRGNISFTRLQQMRESSPTGGALGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD2</accession>
    <name>A0ABV2AUD2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004569</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004428">
        <property type="protein sequence ID" value="MES1923036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="48"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6173" checksum="7F64D239083F96A2" modified="2025-10-08" version="1">MGLACLSAQCVLNEQPCSAAQRSIDVARTPVWHPMDGQFSDVEDESGEKDAFKCSGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE6</accession>
    <name>A0ABV2AUE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004824</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005408">
        <property type="protein sequence ID" value="MES1923277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101898">
        <property type="entry name" value="NHL repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="23530" checksum="FFC7471A83CA89A1" modified="2025-10-08" version="1" fragment="single">MSNTSVPVLPEFIKGTIAKTELEKQFGKIGLYDPNPQKSKKTHILQISQPSRPRFSLACNCNIVKIKETPMPKIRSVHHLSFTPSGEVWVSDDHGNLVLSDLQGNLIQEFSTDVLPTTGSHTVTADGELLYTDYKNRAIHRVTTNMTKTTLITTGDWYPGAIFSSHINGDILVGMNKDKDKKWKVTRYSKEGRKFQDIRRHTKSLDLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG8</accession>
    <name>A0ABV2AUG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004734">
        <property type="protein sequence ID" value="MES1923114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="9"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6442" checksum="DA0E413994D42F22" modified="2025-10-08" version="1" fragment="single">EPHSTSVCQEPPNTRQQPRQTPIYPTRRRGGAEFWSMQSLIQMTQASMCHQEKGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH4</accession>
    <name>A0ABV2AUH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005636">
        <property type="protein sequence ID" value="MES1923328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="104"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14145" checksum="89B8C27039A3E5A0" modified="2025-10-08" version="1">MAKEIIGEKESKSVRNPTLFSDAKGAAFDLDIKFEKRIANLAKTKSHYSDETGSDISIEAAIELPRLASFSLGDNMNSNGRRTFGRSKFGTNFRNRNNGGGYRNGNYKRNSYNGKNRFGGNKRLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK6</accession>
    <name>A0ABV2AUK6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004901</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005706">
        <property type="protein sequence ID" value="MES1923340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019927">
        <property type="entry name" value="Ribosomal_uL3_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11229">
        <property type="entry name" value="50S RIBOSOMAL PROTEIN L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11229:SF8">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL3M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="193" mass="22320" checksum="A012A6CD3DA8B505" modified="2025-10-08" version="1">MLKSNLNRINRHLPKFTKIRLIKTSFKNITQYRKVRKFESDSYKKYNPPQRDLFEPSFPSIMLPTRFQKEQKWTKKKTRMGAIGVKMGCISIWDGHGVIQPCTVIKFDNLQIIKIHNFVNKLDLAKVVLGCGQKNWNRIDPCNRRLFEEAGVAYKAHLKEFQVSKDGLAPVGTAITVRHFLPGQLVDAKSTTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV94</accession>
    <name>A0ABV2AV94_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004931</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005834">
        <property type="protein sequence ID" value="MES1923366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051092">
        <property type="entry name" value="FYVE_RhoGEF_PH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673">
        <property type="entry name" value="FACIOGENITAL DYSPLASIA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673:SF159">
        <property type="entry name" value="LD03170P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00169">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50003">
        <property type="entry name" value="PH_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PH" evidence="1">
        <location>
            <begin position="11"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12522" checksum="E6CF171321639AAF" modified="2025-10-08" version="1" fragment="single">DDVVFLEPKRKFIYSATLTKICRNSKKKYTFFLFSDILVYASKSGRKYKLHRKLEINSAFNYQDLTDGEFGDNRIQISTSIKSFEVHCENKQQKQIWIDHFKNVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVK3</accession>
    <name>A0ABV2AVK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Calcineurin subunit B type 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PPP3R1_2</name>
        <name evidence="5" type="ORF">MHBO_005030</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006281">
        <property type="protein sequence ID" value="MES1923456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45942">
        <property type="entry name" value="PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="48"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="89"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15983" checksum="E63FCA84A2B05851" modified="2025-10-08" version="1" fragment="single">ISIEDLKSIPKLEKNVLLERVLQIMTSTENFNFNDFLNIVSVFCKTDNKNEKIEFVFKMYDVNNDGFISNGDLFKSIELMVGNNLSKKEIQELVDRTIFEADQDKDGKISFTEFQSYIKNTNLEKQLMIKLPKMPEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEA3</accession>
    <name>A0ABV2AEA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6041" checksum="826D7EEC3DB5B49B" modified="2025-10-08" version="1">MKRRALFSRSTRSVYSGLGSASRIGIVWSKPILRCRLEEMSKICLSVGLKLAPM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEG5</accession>
    <name>A0ABV2AEG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000128</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000016">
        <property type="protein sequence ID" value="MES1918110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="251"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="251"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="31455" checksum="5847DCB1956B6D80" modified="2025-10-08" version="1">MTYGYPYPQQMQPMAYQPMPYPNSFYPPPQMQAPAPARQYNRKLDYDFVKDGHKRAIVLKNVELPHAVDVKSKTLSFKRGEPNYKGQMPFSFSPDGEDHVVHITSNNKIKHTVNLSPQPPKIKLFKNGGKKLCVENLYAPENLRLKSNNPMKWNLESHPSKKHTYTLNFDPYDNVHDIEIYYVNKNGKELPCKNGKLKLAPKNKPVVNRNRAPMPYSTQYANGNFAPMAYPQQYPMAYPMAYPQQPMYPQQMPYPQMQAPNRQSQKVRRGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEK8</accession>
    <name>A0ABV2AEK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000153</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="144"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24236" checksum="1D12E5D784EB096A" modified="2025-10-08" version="1">MDKKLHTKLIGPQQFLRNRKNPDDWQTEGTIKNDNQPFSEIDQISKLHDETDRNDLNVNISDTRKETEMKATEMKVTETKSPEDNSIPTYPNLKKDEKIETILRNVAINHPKLNTSWTKLVTEKTEKVDKEEVPRKKIQFRNGFLVSIGLIIDLAICAFVSTMVALVLFRLIYQMFQLLDCSFTQIPNYASGKVDWSLFFRIAKIRFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP6</accession>
    <name>A0ABV2AEP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="202"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="403" mass="46230" checksum="170E919C41B4FFB9" modified="2025-10-08" version="1">MTKKDVHELLQQIPHLNTDIKIYFSSFYQACDSLVKFLRQLFPSIEDSYLPSKKISSLIKPLFILVPTKSPFFKGINDKTFNCFYGAGIYGFNCKDPRGVIKALTFFANGEDTVTPFIHVVKVKNAEAVFRNWKKQEKDEFVEASKPVYTSDFGVAGKERVFSFDRELTLLHPTIPETAALLANIKSCTQKLPLDLRNHSDLLSKHEKIEKTINEMATAEAEMSNLENGVKVMFGNISEKLFFDPEMTDQDILDICDIAIDMIGSQWRKFGKTLKLAKEDLEEYVKKRASRNAKRTELTRIIEQIKIILRNKIGDAFERMYEHGAIDENVQSYLEILDKLDLSNRFGIQNKTKVEAKCEVVATFEFLPCHEASHHVYSRYVGVHKELSEDLKLGNEEEIDSDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEY5</accession>
    <name>A0ABV2AEY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Alpha/beta hydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000236</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NDRG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004142">
        <property type="entry name" value="NDRG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11034">
        <property type="entry name" value="N-MYC DOWNSTREAM REGULATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03096">
        <property type="entry name" value="Ndr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="136" mass="15739" checksum="B3A954717B4EAFC2" modified="2025-10-08" version="1" fragment="single">LDSMWKVYDSNYIPKKKLLGRYFSASTSTTLRKLYEKVLDRQNSRNLTKLLNAMIKRDDISTKLKNINCSVLSVIGLESSLYEDCLYAKNQMNPKLCEFVEIDNAGHLLTEESFDKLIEPVILYLNSFGFTVRDKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF39</accession>
    <name>A0ABV2AF39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000292</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19827" checksum="D131E12CC82200D0" modified="2025-10-08" version="1">MNESVSETETSNSTVTGARSKRSIENFYSKENRVSLSMTSSRKQKSKNFNCSVPFLNILKKRKNIKFTDASENSLSTLTNSLPVLSEVTKGKTKRETLLKKSLCRKNENFDDSESYWTEVFSTAIADVSPNFEIDSSLLRERDISAEIGSFVTETTGETIVYLKFKHWNFDDIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM3</accession>
    <name>A0ABV2AFM3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TCTP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000428</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TCTP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000066">
        <property type="protein sequence ID" value="MES1918463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.10">
        <property type="entry name" value="Metal Binding Protein, Guanine Nucleotide Exchange Factor, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011323">
        <property type="entry name" value="Mss4/transl-control_tumour"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034737">
        <property type="entry name" value="TCTP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018105">
        <property type="entry name" value="Translational_control_tumour_p"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11991">
        <property type="entry name" value="TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11991:SF0">
        <property type="entry name" value="TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00838">
        <property type="entry name" value="TCTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="Mss4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51797">
        <property type="entry name" value="TCTP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TCTP" evidence="2">
        <location>
            <begin position="1"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19670" checksum="606D7EC6C8939AAB" modified="2025-10-08" version="1">MKLYRDTLTNNEIITTAYKKEELRDGSIWKIESNLIDKDDDSGMKAPDLVINYSLNSINYSKKELKAIFKGYFVALKNFLQEKMKENENRESELKKFKEMFGNLKADYKKVGGFFQEEILPEFDDFEFFVTTEGLDQTAPFVIFSKYEDGKTAPSFYFIRCGLTEEKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ8</accession>
    <name>A0ABV2AFQ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000454</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000071">
        <property type="protein sequence ID" value="MES1918490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20950" checksum="96327C643CE11089" modified="2025-10-08" version="1" fragment="single">IFEKTINLLKFGQFSEKILDFSFDQINTNSNEKQKNLLISANANLIFRRIRTTFQNKEFNDKSKSEKLIEFLIKLENSNSSLNLAKNIKFDDKTRTIKFLGEMLNLDKKKFNPKIFIKMAAILAKDFDFDYLSWLNINTEAKNLKSLKIDLVNFCCNKFYFGHSSQTLCQLFANFGLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX9</accession>
    <name>A0ABV2AFX9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000536</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000089">
        <property type="protein sequence ID" value="MES1918589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF458">
        <property type="entry name" value="SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="89"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="134"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="199"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="244"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="9">
        <location>
            <begin position="14"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="277" mass="30544" checksum="86A9DC9505536C79" modified="2025-10-08" version="1">MNSNSDVNFVDLKKIGIMRSTANLVNIILGSGVLYIPKALSQSGFYFGVFLLVLVSAMSAYISVELVKIAKKEKVNEYETLAERAGGTWLFYLTSVFCFLYSFGALMNYSELIKSSIESILENYWTTTQLKQHWVSIGITLALFSLVVTPLSLLRQLSMLSWTSILSVSTFCLLAIGVIIAGVRTFSQPTVPTNPSFSGIVAAFGTLSYSFVCTDSIFPVYLGLENPTQGRWNKVVISTVATIGGLYLIFSTACFFLIPVLVTIFTFKKGRFCFKLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGA6</accession>
    <name>A0ABV2AGA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6 7">Ribosomal 40S subunit protein S13</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPS13</name>
        <name evidence="6" type="ORF">MHBO_000641</name>
    </gene>
    <organism evidence="6 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <reference evidence="6" key="2">
        <citation type="submission" date="2024-03" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Hiltunen-Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Burki F."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS15 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000113">
        <property type="protein sequence ID" value="MES1918720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="JBDODL010000113">
        <property type="protein sequence ID" value="MES1918721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00353">
        <property type="entry name" value="Ribosomal_S15p_S13e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.860.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.10">
        <property type="entry name" value="S15/NS1, RNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01343_A">
        <property type="entry name" value="Ribosomal_uS15_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000589">
        <property type="entry name" value="Ribosomal_uS15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023029">
        <property type="entry name" value="Ribosomal_uS15_arc_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012606">
        <property type="entry name" value="Ribosomal_uS15_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009068">
        <property type="entry name" value="uS15_NS1_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006331">
        <property type="entry name" value="PRK08561.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11885">
        <property type="entry name" value="RIBOSOMAL PROTEIN S15P/S13E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11885:SF6">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08069">
        <property type="entry name" value="Ribosomal_S13_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00312">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01386">
        <property type="entry name" value="Ribosomal_S13_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01387">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47060">
        <property type="entry name" value="S15/NS1 RNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS15 N-terminal" evidence="5">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17139" checksum="CF09CE17A684D943" modified="2025-10-08" version="1">MGRMHSKGKGISRSALPYRRAKPSWCTTDAETVDKMIVKYAKQGISPSQIGVLLRDSFGIPKVRAVTGTQILRILKGKGLAPAVPEDLFNMIKKASNIRKHLERNRKDKDSKFRLILVESRIYRLARQHKKRGKLPPTWKYDVNTISTIVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGC3</accession>
    <name>A0ABV2AGC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000636</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000111">
        <property type="protein sequence ID" value="MES1918715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="14285" checksum="B3C468484AB1FE8D" modified="2025-10-08" version="1">MALQNYEEANQMARIVISVDRVSRKLRCQLYLRTEESFFGMPEEIGRVNIEDNEPLKPLKQILNEYQEKGKPQQIVNEYNILDNFMEPFNDHERNNDYSLYKNYLNSLGTDPMGVYDDHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ8</accession>
    <name>A0ABV2AGQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000771</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000146">
        <property type="protein sequence ID" value="MES1918876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00180">
        <property type="entry name" value="PKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167">
        <property type="entry name" value="OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167:SF30">
        <property type="entry name" value="PHOSPHORYLASE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="76"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="370" mass="42254" checksum="03D50C974C3ACEC0" modified="2025-10-08" version="1">MKKKFNKDFSDKLIKSISNKNLIFLKNLAPTKIKKVSSTQIAKFKNLSLKSSDSKEEQMRICLYKKDYKNFLGQYQYSKRPFGAGGFGKVWKAKKIIGIKNGENKYDKNDYVLKRIDYFNNSENWFSAKREVHFGQKLSGEKHISRYVESFDDSEHKIFWLVFFHEGVSIQAKLYTLDANRFVPSKNWTEMKQNDSLVFLVRALSTQLLEAIECCHRKGVLHRDLKPSNILVDKSGVLRISDFGGAVDATATELYDSNGPSKESVSDEYSPPEVFFDDVPFDAADPAAYDMWSLGVVILELLLGTSDVFKLSPREEAILKNKVSFESDDDIEKALKLGAFAEYGIYPPKELVLSGKWDKSLILPRKVLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV7</accession>
    <name>A0ABV2AGV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000794</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000151">
        <property type="protein sequence ID" value="MES1918901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010989">
        <property type="entry name" value="SNARE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47661">
        <property type="entry name" value="t-snare proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16216" checksum="6F1C6D69089997A6" modified="2025-10-08" version="1">MRKNSENFDSIKQSIEMLLVTLNDKLANLARLVSILNSEESSDSLESAIQEKGITDHLINEVERKIQEIDFIARDNKKTSNKIDIQKIKSFKTKLKHIRKDFRKTVKKFEEGEKTTKRRQNYFFSNIANINSKRLKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGZ5</accession>
    <name>A0ABV2AGZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000491</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000077">
        <property type="protein sequence ID" value="MES1918532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="367" mass="42604" checksum="777A0618B08240AF" modified="2025-10-08" version="1" fragment="single">MLVLNKFKKQVKINARAFSKKRSVINEAELNKARKDWNQKYDWESQYKDNSDQIIKSFQAESDENFYNLFQPMDHFEKKSLPFSETANLIKVKNLLVSENQSCDDEMIKSFFEENGVKTKKIVYLTDELGSPNGEAIVQTNQKMEKLGEMNESKITNLRIVEKILEKIRKLSQTNGSLTIDLRNGEITTKNDENAKLLNLKNFDDFKKSEKNFVELPNFNSEVAFLRIKTSQLDELTKLLQKRIKERSTNVFKVDREKQIAQTKKLDRIELQFKERRNGAATTRTETLNKIAKSAKGIEFLNFLLIQLVKHDGRSIGEEKELFYESLHDALFSEKFSCAHSPEVVKAIENFANTPLGNHSLELLKFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH01</accession>
    <name>A0ABV2AH01_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Adenylate cyclase-associated CAP C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000847</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000166">
        <property type="protein sequence ID" value="MES1918963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013912">
        <property type="entry name" value="Adenylate_cyclase-assoc_CAP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016098">
        <property type="entry name" value="CAP/MinC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036223">
        <property type="entry name" value="CAP_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08603">
        <property type="entry name" value="CAP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69340">
        <property type="entry name" value="C-terminal domain of adenylylcyclase associated protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Adenylate cyclase-associated CAP C-terminal" evidence="1">
        <location>
            <begin position="5"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11441" checksum="0E9D01AD478A5A6D" modified="2025-10-08" version="1">MTSKDKCENVKITVESLISSLELMNSKNVKVGVTDSVKHFQVDKCSDVTLNVKNHEGVMITHTGCKNFNLEMNGKSLKLPSSFVSTFSKGKFDHVIATNDKCCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH88</accession>
    <name>A0ABV2AH88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Threonyl-tRNA synthetase</fullName>
            <ecNumber evidence="4">3.4.21.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MST1_1</name>
        <name evidence="4" type="ORF">MHBO_000913</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.7" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000184">
        <property type="protein sequence ID" value="MES1919036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.20.10">
        <property type="entry name" value="Plasminogen Kringle 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000001">
        <property type="entry name" value="Kringle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013806">
        <property type="entry name" value="Kringle-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038178">
        <property type="entry name" value="Kringle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050759">
        <property type="entry name" value="Serine_protease_kringle"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261:SF7">
        <property type="entry name" value="KRINGLE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261">
        <property type="entry name" value="PLASMINOGEN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00051">
        <property type="entry name" value="Kringle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00018">
        <property type="entry name" value="KRINGLE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00130">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57440">
        <property type="entry name" value="Kringle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50070">
        <property type="entry name" value="KRINGLE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0420">Kringle</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kringle" evidence="3">
        <location>
            <begin position="97"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="345" mass="40180" checksum="DD10E384CFE9980F" modified="2025-10-08" version="1">MFGQPGAATNAFETCRRYRRRLCHLAELTRYANTGRSGCKYFWAYYPEYHRIFGTGILTEEDKCLTSVEYTGLIPVLQHIYSSGYIYYCAVETGPYDDCEGTGKEYKGTLSETASGYKCQHWNKIYPHKHKLKLTTSDQNFCRNPDEHRKPFCLIDDIKARNITAEYCNLNCKPYGNFDHCKISFFNKKYFKGKQCDFSVGRAEFKRFDIDSKNCLHGVPVRSVRLRGQFCIGHLNYYIVINKNREIKDFGSIVLKIFVLYDTSAQVLLRKYDPYFDHINDYDKYYVKCDPAQVDNAANEIYDQSTDHIGRTEFLTRHGKMYLEYSYGTQSASGLKGSWCCENSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ9</accession>
    <name>A0ABV2AHJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001006</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000209">
        <property type="protein sequence ID" value="MES1919142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15432" checksum="F03AAE9080CABDF8" modified="2025-10-08" version="1">MNSKIKTPMIELATREPSPKRCSDAGSSKANPKNQSGDWFWCDHGNFLWTPARVISRDQENVIVESKEDGKLCFSQKDFANFGKCESSTIVFFGKLIHLKNATFENLADMSEFNDAAILYQMRKRFFANSVYVFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI13</accession>
    <name>A0ABV2AI13_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LisH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000891</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000179">
        <property type="protein sequence ID" value="MES1919013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006594">
        <property type="entry name" value="LisH"/>
    </dbReference>
    <dbReference type="SMART" id="SM00667">
        <property type="entry name" value="LisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50896">
        <property type="entry name" value="LISH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="153" mass="18093" checksum="AE99021100859FD8" modified="2025-10-08" version="1">MGDILESDSSVEMTSIHKRQNCEFDVYEWQQLVKRINLSNRIDKMIFDYLSFEGFYDAATNFCKEAKFQMPEKEKEMLVLRKRVKKLLKYDNFDSAVKTVNETCSNKKTAIFWLKILKMQNFIVKNKNLEAINVAQNEISKFDLIKNVSNLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB5</accession>
    <name>A0ABV2AIB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Sidoreflexin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">SFXN5</name>
        <name evidence="10" type="ORF">MHBO_001249</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Mitochondrion membrane</location>
            <topology evidence="1 9">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the sideroflexin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000281">
        <property type="protein sequence ID" value="MES1919411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004686">
        <property type="entry name" value="Mtc"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00798">
        <property type="entry name" value="mtc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11153">
        <property type="entry name" value="SIDEROFLEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11153:SF6">
        <property type="entry name" value="SIDEROFLEXIN-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03820">
        <property type="entry name" value="SFXNs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 9" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="234"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="272"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU362000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="327" mass="36230" checksum="47003FC096C75C76" modified="2025-10-08" version="1">MSDEEFNLEKNKYDQSTLAGRVRHFFEIFNPMLLMTSDKKLKRAVSLLEEYKTGKIKKLSDAVNRELWEAKKITDSILHPQTKEKIPLPCRFAAFVPMNIPIILGMISAKTIQAQLFWQWYNQSYNVAINHSNGNKTNPMSPQKIASAYLMALTVSCGMSVSISKLVKPASKISPIAGIAARATVPFLSVAAASVSNVLLMRYNETVKGIELKNKDGEVVGSSKKAAHKALRQVSLSRAIFPIPTILFPALVKSIMERKLVFKNMPRMAMPFNIALITATTFISLPVSIGLFPQIGSAKISELEDCFKGLKLSDGSPVETLYFNKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK9</accession>
    <name>A0ABV2AIK9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Selenocysteine-specific elongation factor C-terminal RIFT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001329</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000312">
        <property type="protein sequence ID" value="MES1919511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049394">
        <property type="entry name" value="eEFSec_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21131">
        <property type="entry name" value="eEFSec_4th"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Selenocysteine-specific elongation factor C-terminal RIFT" evidence="1">
        <location>
            <begin position="110"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="25214" checksum="5F3C356B2E4470F4" modified="2025-10-08" version="1">MEVKMFKRTEFESTKKIYINSGYTNINANPRFLVDEGINYPDDKKSFLYKEKLKFCKTEKFFVLLTFNKKIIYNEKFPIVALDLDCVDFRFLFYGTPNLVFENEKEIFSKITIYKSKSKTGKIERIQSENRLICSKMFSPFAKFSVFQNFVVRVNGHNAIIKKSFGDFRKTGKFVVAVTEETEDQLKEISFSDENIVKLDFKKIAFGPSKGDIFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIU0</accession>
    <name>A0ABV2AIU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001026</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000213">
        <property type="protein sequence ID" value="MES1919162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="28018" checksum="A3FACDDD40BEF1B9" modified="2025-10-08" version="1">MADSEKCVSEQIKQSDSCIFVCKFADSLFGVPGQEKTELEVFCNKGKWVYMSKIGDNKQQNNLFDSYGQISPQFSCVALKNDQNYCSLKEFDGSAITFKYGVKGVGTDQNVVVECNGGDKMNLHCRDKNLINSANLIVTNVKEVTDFCKDIYCSNKVLHENTGSEIVIVCPKEKNYFGDQCAIYCNTEKQVLNLLAPVTMSTVKCSEQFKWIIANDPTVDFYDISNPVRCRCFCTTLKIKIFCVTNFPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV2</accession>
    <name>A0ABV2AIV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001367</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000325">
        <property type="protein sequence ID" value="MES1919557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="719" mass="83125" checksum="B73D1B4E25DC6D31" modified="2025-10-08" version="1">MILIPKTFRHFSFKNNQFLNKQTFSRQKRFVQIQQISVPRNKRFKIFSAKNLFISSVLFAIPTFFLTQLYPRESKYHFDLLKSKVQSKIDRKTEQSSLRKFFLLFSSLVVNRSEPFCRYLVNRKIFRQCLDSLKSDYEQVDIKLKPLKNLNFEIFLKENEYFDQLQIPNNNIESVKISFLEHRHQDDENMTIITIKRDIDKNGDFANFAVKAPKNVWENSNILKIELILEENCKNFPNILNNDILFFKKSFVEIKSTSIFNNKIAILNFLMTAANSDLFRGALLKNKEDLNVEIQKINDLILTEIPEISIYASQILSGFIKDPRFGPYLLKNDCLNCLLRQSLARHQLVAGNSIYPIAALVQSVGIEKMDLNQKQKDLIFRALLQVSTQLISLGNYPHALVALEDSLKIDKDNINSLAMIVTVHNKIGNVEQENKYLRKLIKIVPFAAEFRLGLASNLFRKGSESSLEDREEAIKHLQKGIDAGNASSPEQLVFLLSDILLSLDREQEAIYYLSDFCESQRGAKIAKAQYKLAKTLLSRFPNDSKALEKVRFLLTKISETEKFSLQTQRNLASVLIKLGHYEEAENICRKMLILDSEDESVLELMSLIKRKRSDWKGVEAILLQLAKNKTLSPAQQFSLGVSRERQNKNVSVVFECYLNGLRELRRRCGRGTAKEEKWFKENPADLKILKDLSERCFSGGCSKEILNEIDSFQKWVKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ36</accession>
    <name>A0ABV2AJ36_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000370">
        <property type="protein sequence ID" value="MES1919701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006553">
        <property type="entry name" value="Leu-rich_rpt_Cys-con_subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00367">
        <property type="entry name" value="LRR_CC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="493"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="532"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="563"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="595"/>
            <end position="614"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="626"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="domain" description="F-box" evidence="2">
        <location>
            <begin position="32"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="688" mass="78938" checksum="780819B73E7CF45A" modified="2025-10-08" version="1">MEDIFENEIKSALDLETYESLKFTLLALNEKPDKHTFLPEDAMFNVIRFLDQSDISNLACASKALRNICNSPLLWTELDLRPYWHKSDDLFVQQLLNTSEKFTNIETLKIDMCRALTNKSLRLFARRCRKLKRLSMFRCPQITQEEIIQFAKKMPLLESIEFYGSVFSLNALIGMVVSFPQLDIGVNAFILSAHKKIAIEKVRMESRENSASLQMARLSQTESSISRSAAKPESSEFAKISQLKLSAHINGVSEVYSIDRATCDFKDSQQASPCWGELKSQVIFGDREFEISGNFPTKVIFACEGHLDMITSVGITECEYCHKYLEDESCVNDIICRLCCDRYSFANKKNWITIKRKNLEKISIGQISNTIKIANPKNIPPFLILYDSVELNISLMRTAQNDHSNSQDLARSATFEEDTPFSDFWSTNRSRIEEASDRIAQILKNAKKEKGANRAVFVYDDSEEIGIYISKGSVNIKTHAKETISVQNFTKSFWWLILPIIFLLTILFVFKSNFLAELPIFYTDNLRSLKPIAPLSVFLFVAIFIFMRTIFLHNQRVLKIINIITNTFLSLACATIFFFFFFFNFRMLFLPFDLLSLSIFTFNLCAASFILTFVRISYSSEILIKGVYLTLTLTYYMQISTHIVLITLIFYFAMEIVILTSPLSNNFLALFSTYGSEGDIVFTAKSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC9</accession>
    <name>A0ABV2AJC9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GPN-loop GTPase</fullName>
            <ecNumber evidence="5">3.6.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">GPN1</name>
        <name evidence="6" type="ORF">MHBO_001517</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Binds to RNA polymerase II.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the GPN-loop GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000384">
        <property type="protein sequence ID" value="MES1919737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003844">
        <property type="term" value="F:1,4-alpha-glucan branching enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd17870">
        <property type="entry name" value="GPN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004130">
        <property type="entry name" value="Gpn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030230">
        <property type="entry name" value="Gpn1/Npa3/XAB1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231:SF8">
        <property type="entry name" value="GPN-LOOP GTPASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231">
        <property type="entry name" value="XPA-BINDING PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03029">
        <property type="entry name" value="ATP_bind_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4 5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="303" mass="34221" checksum="669E7939AFA55044" modified="2025-10-08" version="1">MNRKSDNQAFKELEILETPMNCIVVGMAGSGKTTLLQRIKAHCNEKSIKAYMINLDPAVYRVPYATDIDIRDSVNYQKVMQNFDLGPNGAILTSLNLFATKFDQVLRLISKRAQSHQYAFIDTPGQVEAFTWSASGAVISESLSTSFPTAILFVVDSTRTKSPVTFMSNMMYACSILYKTNLPLLVVFNKIDLYSHEMAIKWMKDIDLFEEALLEDSTYMATLTSSMGSALSEFYEKIKQVGVSAKTGQGMGKLFDLIGSLEKEYKTDFAPFLLERKKENDLRKSERVNEQILKLNKDINKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG0</accession>
    <name>A0ABV2AJG0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001426</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000346">
        <property type="protein sequence ID" value="MES1919629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044634">
        <property type="entry name" value="Zuotin/DnaJC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43999">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43999:SF1">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23082">
        <property type="entry name" value="Myb_DNA-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb-like" evidence="2">
        <location>
            <begin position="232"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="39"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="33777" checksum="FECAB039855B30E7" modified="2025-10-08" version="1">MARENQAEISKLEKAEAKRIKKLVNDAFKSDPRIELYYKKEAENKKLKKLKKLEKKREREKEEKRIEELQKEARKRDFDKKAKAKELEAIINNKILKLKSDFRKLTELHKINAKMANRIFTKTKSAELQKILDSNCGEYELYLVHSKLITKEIESMSTDWSDDEIVLLTKAFKRHPAGTIDRWGKISRHLEKSGVAKSESDIILKSAKLTGKDNLPRKLRSKSLSRYEEGPKWSSEQHFLLEKGIALTANVKCAKSRWTRIAAMIPRKSPKDCVDEFKRIRTSLLDKPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG7</accession>
    <name>A0ABV2AJG7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001404</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000337">
        <property type="protein sequence ID" value="MES1919604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24347">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="14"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="451" mass="52696" checksum="928233F6F5A15C22" modified="2025-10-08" version="1" fragment="single">KKQPKDCEHKFEDYAICSAIVWDATVQIFKVIHKQTGTKFTMKAVRKSKKNMKYLINEIKVADKLKKLKWVCVLKHVFESNDYMFMMFENMDCSLADIKSECKIGADNIGHIFSNLIHAIYMVQKEDVIIVDLNEESIMFDKMGNLKLWGFGQAFYDKDDPILEKERMENVVYVAPEIKNDRVFDKVSDLYSLGKILCGFNLNLSSLEGKLMEEDYTKRIELLDLFEDETVLRWFKIHDKAKIVEFVENTMKDRLSNLLQDFYDEDFEINENALPSAANENLEKVIREWRDIPFELHLPKLFKESYSSKCKKPCCGCEEDLADYKLNCAIKTAKTYIVFEAEKGSEKFAVKAYLKTRENARKYVIETRIHLRAKHANILEPLHSFETNNCLFVVSELCVATARFLLLFKSNETRRKNRSIKRCLAKRAFRVDGLWDCGCVKVFVRKPSGSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI2</accession>
    <name>A0ABV2AJI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001597</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000416">
        <property type="protein sequence ID" value="MES1919840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16223" checksum="54199D0C16624910" modified="2025-10-08" version="1" fragment="single">MVKIFPNLTDKIYPGCGYNYFSAEAVQSSSYRTISDLKNKNFLDLRSEEKQPIRMTDVITAIKSNDIEGLRNNSDLKDVCASRFVQETKNDYSSEFFVSLSQLLDFYGYNGASNVQMINSNRRSLCNHVEFNESDLSFFVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJL1</accession>
    <name>A0ABV2AJL1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial</fullName>
            <ecNumber evidence="2">3.1.3.43</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PDP1</name>
        <name evidence="2" type="ORF">MHBO_001628</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.43" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000429">
        <property type="protein sequence ID" value="MES1919876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004741">
        <property type="term" value="F:[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832:SF792">
        <property type="entry name" value="GM14286P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="287" mass="32151" checksum="940766BE41DBEC1E" modified="2025-10-08" version="1" fragment="single">FPLLCYHKSNSIDTPLVGKESFLFADDCFLTNAISRNDTDAAKAGACAVVAHVKDDKLRVANAGDCRLVLAEKNEEGVLEAIEMSHVDQIGESEIERERLLSNHPREKGLLKRNRIHGRMEPTRGFGDGEYKRSVFNDDPDNWKPPYSTAEPHISERQLSERSEFAILASDGIFDELSAEQAVQCVSTFLERRESGEESLRNASAALVETAFSRAAERNNGRLENGENIDKMLKISGKERRYLHDDMTALIIFFEKEYNVKSKFSGNGQNNTEAPKIVQSLVGLLEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ9</accession>
    <name>A0ABV2AJQ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquitin carboxyl-terminal hydrolase</fullName>
            <ecNumber evidence="1">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001651</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000439">
        <property type="protein sequence ID" value="MES1919905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02257">
        <property type="entry name" value="Peptidase_C19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006:SF915">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="1" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="USP" evidence="2">
        <location>
            <begin position="269"/>
            <end position="599"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU366025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="602" mass="69908" checksum="9B6F49BC33DF9A3C" modified="2025-10-08" version="1">MNAPRTPEKFKLVLINTENLLRLKNANKPFDLAKIYHSNLGEVTVSFSRDRRAVHSINLTKWIKSIKIDKLSLDKKCKITFISNKNKNIVAEIKFKSNATQFKNTLNRIEAFVQTAQLYIHYSNDGNTKKLKQLPRIFLHEKYSYSPINKLTSAGKIKSGFVETSKLPTSNLFMSPKKFKFDNFVENDNSIKNQNSVENQIFFENDNSIKNQNSVENGNLSNPKKSSKELIKLKIDEEINNKNNKIVSKIDNFLDNGAKNKFKNTQNLRGFVNLGNTCYINSVLQSLLHLKTFCQTLSNKKNFLLKNDNFCFEILKLVQKRQNSQNNGEIFQKTEDILLNVKTKLVKTEPVFADNRQQDAHEFWTTLLNQFSKDFSDKLPEKESPENVCFCFSIRQTVVCTGCEFSRNSVVRNYDLSLNFGDDEKGENSPILSDLKNGGNFGRNKIIYQSVQDMLNSYFQPKMADFSCEKCKNNSVLIKQEIYQNPRILVLHFKRFCFEKQNGQYFRAIKLHNSVQIDRKIDLANFSQKMGQKNRYDLRSVIHHRGQTVESGHYVADVLAGKDKNWFCFDDENVQNIDVSTLDQKDRRKSCYILFYELDDNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU7</accession>
    <name>A0ABV2AJU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Diacylglycerol kinase</fullName>
            <shortName evidence="6">DAG kinase</shortName>
            <ecNumber evidence="6">2.7.1.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001439</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 1,2-diacyl-sn-glycerol + ATP = a 1,2-diacyl-sn-glycero-3-phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10272"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17815"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58608"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.107"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the eukaryotic diacylglycerol kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.107" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000353">
        <property type="protein sequence ID" value="MES1919643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="entry name" value="Probable inorganic polyphosphate/atp-NAD kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037607">
        <property type="entry name" value="DGK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000756">
        <property type="entry name" value="Diacylglycerol_kin_accessory"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001206">
        <property type="entry name" value="Diacylglycerol_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11255">
        <property type="entry name" value="DIACYLGLYCEROL KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11255:SF121">
        <property type="entry name" value="DIACYLGLYCEROL KINASE (ATP)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00609">
        <property type="entry name" value="DAGK_acc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00781">
        <property type="entry name" value="DAGK_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00045">
        <property type="entry name" value="DAGKa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00046">
        <property type="entry name" value="DAGKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="NAD kinase/diacylglycerol kinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50146">
        <property type="entry name" value="DAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAGKc" evidence="7">
        <location>
            <begin position="18"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="370" mass="41541" checksum="C6F2171DDEEF599B" modified="2025-10-08" version="1">MAPFCISCMSDAEPLIDDNEPFVIILLNPKGGAGKAKKVMEILKDRENCNVIDILRFAEEKEEMNVRKELENIVQKNEKCRIVFGGGDGTITWGFQILDEIGIMQPIAILPLGTANEISKCTGWSNSFKLDHLKDFLYHVRHGPTFDFDIWNVSYSDNPGKDAKEPIPERRPSIMGAFLSFGTDAQIANKFHLSRQKKTKQPSIAESKISYAKYDLVEMFRPFKSINKIVKLKVDGEEIQFNKNYSCLQLLNINSMAGGVDFFGKGKSGAKDLMQDGQYTKPLFCDKKVEIIGETSVHHYNLCFLGLSRGRRLGQGNVVEIESQEAIPMEVDGEPFLNPRGTVVVTSLGSRKMVLGNFRNANTRRGIEMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJX9</accession>
    <name>A0ABV2AJX9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Inositol polyphosphate-related phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001712</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000465">
        <property type="protein sequence ID" value="MES1919975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046985">
        <property type="entry name" value="IP5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000300">
        <property type="entry name" value="IPPc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200">
        <property type="entry name" value="INOSITOL 5-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200:SF300">
        <property type="entry name" value="TYPE II INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22669">
        <property type="entry name" value="Exo_endo_phos2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00128">
        <property type="entry name" value="IPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="Inositol polyphosphate-related phosphatase" evidence="2">
        <location>
            <begin position="54"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="371" mass="42959" checksum="3509F735A01CD1F8" modified="2025-10-08" version="1">MENIERYLQSTPEILIFYVAILVYILILLSTCAYYQCKIGNCGTRRKRGDFDFKNLRVQVLTLNCEGNAPPTNLDDFFYDPFNSDIICVMLQEMVPLKKADTIKRSFIIDDKTALNKWDVAMKNFLVYDKSGFRLIARRSEVGNAVLVYANHKTSKHISSIQTRSIKLGYAKNTLGNKSSTAASFYLGNDILCFSSAHLNSHRFKNDKRYKDIQRMFKKIKFNFNGKTMTIDKMNTFCGGDYNFRTPVKEHINDEQYPKLSELKEQCQANDFSLAVSLDKNYNQITETMQGNFVEADIKFPPTFHLDFSDPREYVDIVKKGKHLTPSYTDRIFTNLTSEGIKVYTSPSLRYSDHNPVIFVYQFPDEKPKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK07</accession>
    <name>A0ABV2AK07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exosome component 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">EXOSC10</name>
        <name evidence="2" type="ORF">MHBO_001743</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000478">
        <property type="protein sequence ID" value="MES1920013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045092">
        <property type="entry name" value="Rrp6-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12124:SF47">
        <property type="entry name" value="EXOSOME COMPONENT 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12124">
        <property type="entry name" value="POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3'-5' exonuclease" evidence="1">
        <location>
            <begin position="231"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="385" mass="43541" checksum="8713A2BE79061D63" modified="2025-10-08" version="1">MTDLDQHLKNLIVNIIDAQRLSGSISLNTKTPLNNLKLKSEAILFQLLDMVEQKRIQSNETPPFRELDIEKIFDAVDICQSLANKIAGNANKAIKDECPAGDFQDENLFISAEKSVFGGRNNNVKKQPNIKLQKRFKNRPNIKLQKTALLRQKHEKFLASLYNSANKQLFAERNFQFSANREKPDHPFRDLVVYGFDKFRLLDAVEIARKYDQSFPKPLKLVTANLLKTPCHWIDTADGLASLVRTLSSADEFAMDLENHDTRSYSGFTCLIQISTAAADFLVDAIALHDELGALNEVTADPAILKVFHDARADVMWLQRDFGVFVVNLFDTSLACSSLKLEKTGLSFLLSRYCGKTKAKSMQRADWRIRPLTPGMVEYARGVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK13</accession>
    <name>A0ABV2AK13_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein TIC 214</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000477">
        <property type="protein sequence ID" value="MES1920010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="77" mass="9037" checksum="D30FD7599CE996B3" modified="2025-10-08" version="1">MNSFYRKGMLQAKNIKIPHLRNCLVFGAVIYMPIYAMTFYNLYPLLLPHQKKFLLSFTLLGSLDAEYKENGEEDEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK28</accession>
    <name>A0ABV2AK28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001754</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000482">
        <property type="protein sequence ID" value="MES1920025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046986512" evidence="1">
        <location>
            <begin position="17"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="30349" checksum="068CB28B0CACA860" modified="2025-10-08" version="1">MISLFIILLLHRGAFQSKFNFAESCALRFEPGGGPDALEFRVFKKVAPILVRIGITSPYMVEPDVYSLELQLFSMKMHPSQKEEKLIMRKWSTGNFTTHSPVFEFNFPPGTVLNRGSYRWAVKDFSLYQLYVASSNQRLEAGGVILNDYLAIELPYEVQPNQPLFTFAMETFPCEFFRRGRAYNRDFIRKEYVPIPRQRVHLNYTNFERIAAEVKDAQFVELINRIKERMEDLTKKLRKLVETLIGRTDHIARSTLMKSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK46</accession>
    <name>A0ABV2AK46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000492">
        <property type="protein sequence ID" value="MES1920050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18818" checksum="21030AB82D7063C3" modified="2025-10-08" version="1">MIDEMPKILNIFEKQSDILIILQTINSHSSKDINAFDKTFYNRLKCVNKEMLHLFLPQLIGYLYEFENEQMAEILLFRCKNDLRILVKTIYYLNCVIKENSQSQKSKFANSYLDKLNFCKFGNSNFDSVEFTIRAESKREKSSRATKKFEPIVYNQKAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK88</accession>
    <name>A0ABV2AK88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001808</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000508">
        <property type="protein sequence ID" value="MES1920089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002298">
        <property type="entry name" value="DNA_polymerase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133">
        <property type="entry name" value="DNA POLYMERASE I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133:SF27">
        <property type="entry name" value="DNA POLYMERASE NU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="28196" checksum="94A962681428080B" modified="2025-10-08" version="1">MARLLDSDRLRYSLEVLTTDYLKRPKIPFKKLFPVPETALKEIRDSDNGGTKLDEDIESIDKDLIPEPFLLQINKKNRMKWIDYCVYDTEATWLLREKFESLLLKQHWGVCSTMYDLYKKVYVPFARLLVRMEERGFHIDVKGALSDSFENAFSIASKYADKFKKWAVKYEPNSENLNPRSYRQVQQLLFAPNSETDLHETKLKHDHIFNIENENNVILPGKKTPNKYLKVRIRVFKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK89</accession>
    <name>A0ABV2AK89_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Fatty acid hydroxylase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001804</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000506">
        <property type="protein sequence ID" value="MES1920085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006694">
        <property type="entry name" value="Fatty_acid_hydroxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050307">
        <property type="entry name" value="Sterol_Desaturase_Related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11863">
        <property type="entry name" value="STEROL DESATURASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04116">
        <property type="entry name" value="FA_hydroxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="58"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="157"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid hydroxylase" evidence="6">
        <location>
            <begin position="102"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="28847" checksum="50BC93CD4CC77A75" modified="2025-10-08" version="1">MVDFCKTEKWGLYYHFIFVAMNIGILEVLVPLITILFKNYKKIPMKADHLDELENVDIFYLVVNRFTTVSFVYFLSRFCCSTQIKWDIKEATITNTLLPLPAAYLTYDFFYFIFHWTLHRKQIYGYIHKHHHRQRSPTRGYIDASNVHPLEFVIGEYLHILSLSLMPALHGYSILIFFVLSAFMNSLNHTRFDVHWFFNLYDVKNHDIHHRLPNNNYCIYSRCWDVIFGTFREYNWDKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL7</accession>
    <name>A0ABV2AKL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000550">
        <property type="protein sequence ID" value="MES1920207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17344" checksum="B8FFBBF881E5CC92" modified="2025-10-08" version="1">MFRFGEYSYSTNTSISCINGYVKDNLPRVVNRSDVHYCFDQIAARFENGVLLDGCYENVFNGKCIYKCYFPYASLDGKYSDMSSCSNGTINKLPKCFLQKKLVITLSLIAIMIIFLIVIMAVLLLKNFGIFDFISKKMTKESKVDDPKDIEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKU8</accession>
    <name>A0ABV2AKU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001993</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000604">
        <property type="protein sequence ID" value="MES1920310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="445" mass="49181" checksum="2D142B15BB85E624" modified="2025-10-08" version="1">MILCDKMTVIGTGDDNDGGDGDIAGGDDDENKNGNDDSTENTIDNENGGFENGDRSIGTRNPILQNCFSGDLYSSTTTGNCSFSHFYGHNQFCSLKCKTGLFPSRQFLHVSRNLICYNGNWRYTNKAFFSKSDFYCNVKTNENTADDDVGCYDDNSCVDDSGIGGGNDNADRASRDSCDSSIFQNSGSGYLLSQNCNDANYIKSAGTLCRLICNSGKFQTSKTSQILLTCFEGDWYFSSIEEGGFFPAEVVLQSLVCSSDVERENEDLPFIKNGKYVSSKCEKSEGAVCRFVCDRDLFAMPYDRRRHNKFEGAIWSQNGEWVRPLCADHSFVVEKDKHSLESRETSYGAQVVFEVDWDNCVVDSNGETVCVYSCSPGRISPFSSQKSLLSFISGFTKRSASTWTPVICSTREKPVEKVSTVLMESDFGGKALIRYGLVELVLLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW7</accession>
    <name>A0ABV2AKW7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001971</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000586">
        <property type="protein sequence ID" value="MES1920285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="163" mass="18489" checksum="1C067B811EF2BF48" modified="2025-10-08" version="1">METYPPDISELKYLINVRILQAFLKQSIISSTGFKEIECVVTEGPISKSTSKQKISNNPIWNEPVNFVFTFNPGTFFKISIVVSTPKNKNKKVIAHGITSFKWPLTVTEWVIVPLYTQVVSGITEEQHVGSIELQVVCKKSFCDENEINSYDYSHACRINIKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL63</accession>
    <name>A0ABV2AL63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002076</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000650">
        <property type="protein sequence ID" value="MES1920404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="33"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="48"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="97"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13837" checksum="0ADEB469DC4B6CF1" modified="2025-10-08" version="1">MARKIQKVFVCKFTEIEIQTKNSTETDLNGVSDKSKNVEMKKSEKLNVQKKKKRGRRRSSHKKKVCDNKEFAAPKDEMTSVKEKDLDVQKCRSNFENKNFSTESANAKNENGLEDSKSFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL64</accession>
    <name>A0ABV2AL64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002074</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000649">
        <property type="protein sequence ID" value="MES1920402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19781" checksum="16B310A74ACF4F3A" modified="2025-10-08" version="1">MHLHNILMEFIINFEMTHLISVSGQDTYFFDKEVDVVADITKTSFSPLNKSNENKAFSNLEKKAIFKTNSEKTAQDLTSIGFRPAKEIMVFGMSSMLLRDAQFFHPDAPKVTIIVNKTRKKDGLGVLAVLWAVKTIIDVNFDISDFGEESDVDKLVFNSEEIISEDESVKRMYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL86</accession>
    <name>A0ABV2AL86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002077</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000652">
        <property type="protein sequence ID" value="MES1920405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="718"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="718" mass="83025" checksum="AEFCD3619482751B" modified="2025-10-08" version="1" fragment="single">ITPKMKKTQNKKLIECGDKVVIKPQILIHCFRSFQLCPINMNWFGWPSEFNSIVNRECVVRKLCKKTSLALVEMTAENRSKFILIWVPIKAIKRLAISEKFCRVKSNEKLRSLLRNNLVKNIVSLCTRIVTKVIENKSKDLEDEFGKRFVLEQMARSHLRYFESFENIPFSFPEKTKNFERFLTIEDSFEMSNKLIIEGKDKIAKNNKKLFFKCNEMSLKGEQFHFRNTVLLWKQHILIEHSEALCFSILGKITVPPEVSIVVAGDENCEEVLLELKDNKIFYPFKIDRGEAWVFVLARKAERESRLRNVQIYLLASSTCLELTLGLWLLSVSMDRLKELSLRGKSDRNDEGKVAERIVKTLLPRVKDGIKGVLAIVSQTNCSLYVKLVILRTLSYVLESLKPFCAPEKHFGFSEEISNVVFKDLSFVSEIQKIEKSENSNKEIYSEYYHALLEILILTCFNQIDSTLAEESIVSSDNPRNELAELMSCFSNNSYPNSFLWPELSERIVFVLYMLRYVTGDNRRLDAFEKMAGALSKTAKKKVSWQRVTKEDLEEIAEFEYDSKITKISIEIARELLLEIDNSGNLIFLHVDLRNGKFAKIVRKSKRLLSTKMLLNLTDSILDISSMTWNPKRVKIDRINSEKSIYIQLFDQIGLVDSSKLRIKPSPTGNSVGFFVNFVNESAVGSTGPYREVLEQIFNEIFSVKNDNFLFEPTPNFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC2</accession>
    <name>A0ABV2ALC2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Leucine carboxyl methyltransferase 1</fullName>
            <ecNumber evidence="6">2.1.1.233</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001894</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha-leucine ester residues.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>[phosphatase 2A protein]-C-terminal L-leucine + S-adenosyl-L-methionine = [phosphatase 2A protein]-C-terminal L-leucine methyl ester + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:48544"/>
            <dbReference type="Rhea" id="RHEA-COMP:12134"/>
            <dbReference type="Rhea" id="RHEA-COMP:12135"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90516"/>
            <dbReference type="ChEBI" id="CHEBI:90517"/>
            <dbReference type="EC" id="2.1.1.233"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the methyltransferase superfamily. LCMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.233" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000547">
        <property type="protein sequence ID" value="MES1920198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016651">
        <property type="entry name" value="LCMT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007213">
        <property type="entry name" value="Ppm1/Ppm2/Tcmp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13600">
        <property type="entry name" value="LEUCINE CARBOXYL METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13600:SF21">
        <property type="entry name" value="LEUCINE CARBOXYL METHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04072">
        <property type="entry name" value="LCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016305">
        <property type="entry name" value="LCM_mtfrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR016305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="293" mass="34619" checksum="692A00C2CA9811EE" modified="2025-10-08" version="1">MKRSCVETGYYRDDFLRHFTKGYQKRSPVINRGYYCRVKAVENILIKFCQNFEDRPKQVVSLGCGFDTTFFRLKHHHNIIFSNYIELDYKSIVSAKSEIIKNEKKLFSHLKNFKIKNGIKSDDYNLMSCDLSNIETIKKAFSEHKISYSAPTIFIAECVLIYMDSESSNNLIEWTTKSFSDEIVFVNYEQIHPGDCFSDMMIKNLAARNLFLKSFEQYPNLKSQEERFKNLGFDKAEAKDMNQIFEEIMDRNEIAKMQELELLDEIEELQLIHRHYCIVVASKNIKRCFLNIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD0</accession>
    <name>A0ABV2ALD0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001953</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000576">
        <property type="protein sequence ID" value="MES1920264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="27686" checksum="C64B98AD9EBA6E08" modified="2025-10-08" version="1">METKMSVYLFVFILIGTIILIAIIVYFFLDKKKKKRTNSNENDLSSGSQNYLIYYSSKEEAVIQISRKINFPEEIKTILELFDTVSNLEEKLKLKTNFTDKINSHECLSYIKHASVADTILLLEAIIKSETKDKIDLDVFNAICQKFDIFDKNFAFRKDASLLLKCKNYVANPTFFNEKVLKDYKNDDKEMFEHKLENFKIKKYYQLKVIYDFIENEKTENFIKMVEDLEYFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALE7</accession>
    <name>A0ABV2ALE7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Calponin-homology (CH) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002111</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000675">
        <property type="protein sequence ID" value="MES1920442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.10">
        <property type="entry name" value="Calponin-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001589">
        <property type="entry name" value="Actinin_actin-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001715">
        <property type="entry name" value="CH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036872">
        <property type="entry name" value="CH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044801">
        <property type="entry name" value="Filamin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38537:SF8">
        <property type="entry name" value="FILAMIN-A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38537">
        <property type="entry name" value="JITTERBUG, ISOFORM N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00307">
        <property type="entry name" value="CH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00033">
        <property type="entry name" value="CH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47576">
        <property type="entry name" value="Calponin-homology domain, CH-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00019">
        <property type="entry name" value="ACTININ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50021">
        <property type="entry name" value="CH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Calponin-homology (CH)" evidence="3">
        <location>
            <begin position="10"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Calponin-homology (CH)" evidence="3">
        <location>
            <begin position="126"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="30610" checksum="2495B860FB69068C" modified="2025-10-08" version="1" fragment="single">MSKETVPWVQAQKNTFENWINQSLKDTEFQIKDIKFDLTDGKALYALYRQLTGKKIKSIDHKPVMKINCLLNLNLVIDHFKKDKVKIVNVQGEDVYDKNLKLILGFIWMLILKYQILGDNEDEEAKAAKSLLLDFVNSMISGRKARNFTKDWKDGEILGKLVDAVEPGSFPEKMRPEDSDKLVSKSLDVAEEKLNIPKVIQPEYILNATDEHSLMTYISYFKQYTLNKRNEPYGPMCTASGKGLGDNVNADSPHPFEVVLRNRYGES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG1</accession>
    <name>A0ABV2ALG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000692">
        <property type="protein sequence ID" value="MES1920480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15145" checksum="E0CA6F115811001C" modified="2025-10-08" version="1" fragment="single">MSDLKTIYKLLRNKGYTITKPAYEKLCRFLKSPENSKKNMVDLLNAVLENIQKDKKCKMILETDDVSRALDKLYSNYKKSSTIFLSSKIGDGSNLSDENFIERKFSIFANRFNKLLKIAKKGFASSNGDIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG3</accession>
    <name>A0ABV2ALG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002172</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000711">
        <property type="protein sequence ID" value="MES1920507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="33227" checksum="D488FDD51E5D40F8" modified="2025-10-08" version="1" fragment="single">NRNNKVPKNTKSFKGQHDRPHLSEEELSELKWPILTLYALLGCGMVANLKFLAMFLAHKYFGDNEDKFGLLEIILSIVVVFFKANSILIFDWALRIYTNRLVLMIDAFSFSIALSEVIYMTTLQLYKLYDPAMMNLFYIAIIFLLLCIYSMRSGDKKPIKICLLEQLKHCLQSTCCRRDANQKISSKEGYQRYPSKKEKGCCCLAENEKKYRFGKQKNISSISLSSKELHSKKFYGANNFEEMQFNKIENEYIYDQNDRDFGQLENERGQNYDVNNGEIEIAYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH4</accession>
    <name>A0ABV2ALH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">RNA helicase</fullName>
            <ecNumber evidence="9">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">MRH4</name>
        <name evidence="9" type="ORF">MHBO_001992</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000603">
        <property type="protein sequence ID" value="MES1920309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47960">
        <property type="entry name" value="DEAD-BOX ATP-DEPENDENT RNA HELICASE 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="8">
        <location>
            <begin position="96"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="130"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="96"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="551"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="551" mass="63243" checksum="61803C80D44F8441" modified="2025-10-08" version="1" fragment="single">MMNKILAKTKNAVKPKMRKSGDLRKPKTKLNIDKTKISVNEIMKDFDTLQNENFFNKAIPNKNSHFNNNLTKNKSPKKLDNFEKAATPAPFINTNSNFEHYIQSPKILKNLYKNGFKYPTFIQNLAFPVIKNAVNKKTIVLGAETGSGKTIAYLTPTIDKLLTPDQRRLEGYDHNKNLARLPRAIVIGATEELCNQIKNVAIQIAENSKIAIQHFRESQTFPQIEHRDKQKFSNHLFVQTENIRKKAVKAQQKEILQIKKNENLEKSENPKWFPDVLVCTPKTLATKITPDLAIGLNFIIFDEADFLLEPFNERWTYLKSILAVFKMIEKETDQTQNFHIIDQSKSGDKIATKSGKNNDENNIVNSKKGDLRETKKDLLSPLKSFIGLEKSKLKYIFCGATLGKKIVQKFLHKTEMTQKQTNRLNPLNSLFKNSVWIQSPMLHHVLPQLETSWKLVKGEIDHQISLLKALGVNSNFGDNENCNEINLEKLYNKKLINFTESKILERNLDRKFCNEKTLIFCAFPQNVAKVNAFLKKLGFDSVAIHEKMSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN4</accession>
    <name>A0ABV2ALN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000646">
        <property type="protein sequence ID" value="MES1920394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2230.10">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035927">
        <property type="entry name" value="DUSP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143791">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="675" mass="78409" checksum="0BE0C4AF0CD64473" modified="2025-10-08" version="1">MGGTNSMVTNDGKQLSTSHESGLSYADRRLVEKETFYNGYEINELYKLFSKITGSKKSKKEIKRIFNSDFEKQFPYYALEKLRTSFMNSVRTGFLSFCKFLMKMDVFRNNRSQKSKFIFFLFDQNGDAFLSRRQVADIAIASKRVIAKSNVYSTQQKRHKIKEVDRFAKKSSSQSKTSRKKVFSTIQKYLSNVNFIESAENFISDVFDELFYSFNFVIPRESQKQLVVSILKNQRRLNVGSKWAFIDKEWWEDWANYTNFGSKDLEKGQLVKKMASSQNLSETSNEETFYSKEISRSRSVASSNELSHTTQNLSSKHSAVYEDFLQTGFRDEKDKTDNEKSAVDQQTTFAEKEPLVRPTRLKHLILPRLDRQKMKDNFFPKPPLIAFSEGAFQCLDNSVLVPLAVKEKLAVIYGGDPSPSFCAVTEENKRFVDVEPKKWIFWSLNSKNVPRILAEIRMSDRRTASNLFSKFAKANEKNRPNAIFWVRKKVGISEKGETDSKWTLLPEATYTKKGANSETESQNRDSFYCEDSHFTDNDSVDQRFEAENVSAFEREQKGAFRFEKDWAELSEEKGDVSLKDLGISEDVLVETDKVYFSKVVRRILGLSEQLAFQNRKSGRPQNRKQMDFGQNRQNRRRFCYSSRSGKEEGAVRSAKKFGFFGRRSALWMHRFLLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ1</accession>
    <name>A0ABV2ALZ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Eukaryotic translation initiation factor 3 subunit D</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002345</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000814">
        <property type="protein sequence ID" value="MES1920702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007783">
        <property type="entry name" value="eIF3d"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12399">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12399:SF0">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05091">
        <property type="entry name" value="eIF-3_zeta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016281">
        <property type="entry name" value="EIF-3_zeta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="532" mass="62508" checksum="97BA3D082880A81B" modified="2025-10-08" version="1">MPDKLFENINENPVEEVIKLIKKNKNIDAEKDKNAPYFYKIGENGSTKRENVYNNYDHQISSFVENKRISDIPKFGKIKQFNKDQDTIDMLNKYHQKQFQRKFKTDHPKSKKNLPRNTKKNRYNANYYKHFYQNINNTETNYIKREFSIDVNDFGEQIKIFDFDYLNSLKIKLKDLTEERIGFKGTVYSFDKSVEKISPQNRLKLQNSPLKSSKLHTRYEIEEDSIIEDNLDKADIFISDLLLATIMTATKSYMGWDIIVKKKDDKLFFYKRRESDVEKEFCMNTKSKTEDLLSKTKESSKINDNFIFSSLNSNEQLKFDPNSQKKFDHLITKPTKNSTENKNSTEKKLPNYEKAFQYKIFGISENTKILVKCQIDTFVKNESLTKKEKTFDDIHLLSLKALNEYEEADSANSWRCRLDNQKGSVLVDEVRQNNFKIARWAAQAQIGGIDQIRIGFVSRSKNKKPFDHFAQATIKESPVNLMSQMGIYKSNLWAIFKEIADFAMENLENDKKCILVKDPNNDCLLLFEKTAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AML0</accession>
    <name>A0ABV2AML0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nicastrin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002503</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nicastrin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000930">
        <property type="protein sequence ID" value="MES1920886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041084">
        <property type="entry name" value="Ncstrn_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008710">
        <property type="entry name" value="Nicastrin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21092">
        <property type="entry name" value="NICASTRIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21092:SF0">
        <property type="entry name" value="NICASTRIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18266">
        <property type="entry name" value="Ncstrn_small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0914">Notch signaling pathway</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357137" description="Nicastrin" evidence="10">
        <location>
            <begin position="18"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="Nicastrin small lobe" evidence="11">
        <location>
            <begin position="34"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF18266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="28929" checksum="0A992819BD3B07DC" modified="2025-10-08" version="1">MNFVWLIFNFVMKFTHSKHFSREDMYTTLGADYCIRHLTRDSKYGCASSWKGESGRMVTKEDLDNKNYHENLILLISADLFTKETIDLLISKHRIKGIVVNKNKEPESSSHERQKPFISSKPNGVDDFVWNEKGDGLIYDDFNIPVAFLSSGRYKNFENTKSYLKMKSEMFGKQNSQNCIEKMTCSPVGGFSPWSLYGGAKIKTTKFLILSAGLNSNDFFSYRNQGASTSVSGLAALLSIAITIKESKVFEPKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU8</accession>
    <name>A0ABV2AMU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase S1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002582</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000993">
        <property type="protein sequence ID" value="MES1920976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="entry name" value="Trypsin-like serine proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001254">
        <property type="entry name" value="Trypsin_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00089">
        <property type="entry name" value="Trypsin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="Trypsin-like serine proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase S1" evidence="1">
        <location>
            <begin position="29"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20478" checksum="93C958A0B47BB4BB" modified="2025-10-08" version="1">MFRVSFTEVIDKACGQTCKTASLAILFDTYGSFICSGILLNKEWVLTTASCVSKKVFKIKSEHRLRRRFCRKNRLVPPFAVTFFILRAEESQSSNVHQVMLHPDYPLDGTNDSDKMNYDLALLRIDPDCYHRKAKIASTYGFGLSIKIRRQKRHFLLGSAGKKKAFEVDVRRIHVDKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY3</accession>
    <name>A0ABV2AMY3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002451</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000888">
        <property type="protein sequence ID" value="MES1920819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039727">
        <property type="entry name" value="SE/Ars2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021933">
        <property type="entry name" value="SERRATE/Ars2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13165">
        <property type="entry name" value="ARSENITE-RESISTANCE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13165:SF0">
        <property type="entry name" value="SERRATE RNA EFFECTOR MOLECULE HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12066">
        <property type="entry name" value="SERRATE_Ars2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="365"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="280"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="25"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="42"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="121"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="282"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="429" mass="50761" checksum="704510D11F077B52" modified="2025-10-08" version="1" fragment="single">MSSDFLKGRKRSFSSSSSSLSPFRNNEKSRSAKIKKDFSVSPVLQMSSSPSNFPESPQKRGGYSIPSKRYEGHNKKRRYNHSYVKRDSGNNRSRSRSNDFGENNFRKPSARQNNRSHRKHSFDSEDDRSSPRKSDFLSYKEFLSKQKDDITPEEAQQLYQQYKKEYKLTNNQIFFNRHKDEEWFLEKYNPIGQNLCYQRNLKLAQKNAKSFFEELEGAVSNKNFEKFVEKFDLNNDRSSFLLYEKIFSELNFPKNEEQKDEEYLINQLKKRLFEEREKITDNNQNENLEQNETLEQKKNLEQKKNELEKAKEKSGKNLLESEEKTLNPFLFSKSFEKNLSNLGKNLAKKRNERLKSENSFEFDENAVFVSTLPLKVTRKQLVDVFGKQDGFIKICISEPIAKYDMNRFAWITFDSKENCRKALDLNGHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN29</accession>
    <name>A0ABV2AN29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">T-complex protein 1 subunit gamma</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002486</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000917">
        <property type="protein sequence ID" value="MES1920864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="entry name" value="TCP-1-like chaperonin intermediate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012719">
        <property type="entry name" value="Chap_CCT_gamma"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053374">
        <property type="entry name" value="TCP-1_chaperonin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054827">
        <property type="entry name" value="thermosome_alpha"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02344">
        <property type="entry name" value="chap_CCT_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF041082">
        <property type="entry name" value="thermosome_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF041083">
        <property type="entry name" value="thermosome_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="GroEL apical domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="GroEL-intermediate domain like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00750">
        <property type="entry name" value="TCP1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00995">
        <property type="entry name" value="TCP1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 8" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="541" mass="58853" checksum="1BC737C55BFDC556" modified="2025-10-08" version="1">MNAPILILNKNAQRETGKEAQMGIITASKAIADIVRSTLGPKAMLKMLLDPTGSVVLTNDGASILREIEVRHPAAKSLIELSRTQDEQVGDGTTSVVVLAGELMEAVRPLLSGGMHPSVIVGAYRRAADLSLQALKKCAREVDPTDPKQLLSFAVTALGTKQVSRFGNLIPRLAVEAVRTVSFEESGKRTSDLRALVKVEKVAGGEIDSSRVLKGVMLNKDILHAAMRRRIENPRIMLLDCPLEYKKAESETNIEMNRAEDWRKYLDLEEEHIRKLCEAITALEPDIVICEKGVSDIAQHFLLQKNVSVLRRVRKSDLHRLAMATGARVGSNSTSMKETDLGKKCALFEVRKLGDDYWSFFENCDSPKACSVLLRGSSSEGLAEIERNLTDAMGVVRNIIMDPRVVPGAGASEMAMSTVLRKQSREESEAAARVFACAASALEIIPKTLGENAGANVSQVIAKLRSAHEENDSLLGVDGDSGEVCDVSELGVFEPFSVKQQAIKTAFETATVLLRIDDILSGVSKNPDQQQMAQQGVPNIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN38</accession>
    <name>A0ABV2AN38_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002673</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001071">
        <property type="protein sequence ID" value="MES1921086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="212" mass="24282" checksum="CA89543CDDC8AE26" modified="2025-10-08" version="1">MLRPEQPTYSLPSTLLNFVFLLVNCYFYKTIGNSEKTAFPMSGTKSLIVLHFVGMVRFSLMPWLNFLFENLRRVCPITALFFLCNFFFSLHFPSARQLMVPHGYFCLFVFFLHVFHIRFWEDLVFAACFLFVLRLHFRLIAALFRSFWSTLAVSASLGAAVYVLRRGSVGAGEACGAARARVLTEGRLQVLLSASFWAIHFCLQNILSSKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANA7</accession>
    <name>A0ABV2ANA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001112">
        <property type="protein sequence ID" value="MES1921150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="79" mass="8994" checksum="755647DB05E3FE2D" modified="2025-10-08" version="1">MLRLRANPKKKSNTAFGIPSAQNWAQLFWAGWTIFGYGQETSFSIWERLLAQQCPIAATSSGRRDWFTPSSSRIDRDAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANB4</accession>
    <name>A0ABV2ANB4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002446</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000883">
        <property type="protein sequence ID" value="MES1920812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="234"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="326"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="456"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="234"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="250"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="275"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="286"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="331"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="352"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="364"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="542"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="542" mass="62700" checksum="AD78C0510577D978" modified="2025-10-08" version="1" fragment="single">MSFNEGAGFNSSYSPRKENFAAQLKRVLEERKFLQYKHLISVWKYVGEKTTITVYPILQEIAKLFSGIEWCGDYGGLKVEYEQFVPEKFKKEYRRVMFGEMSTKQSYFDPKIKKAALNLENLSQQELDVFMSNPNTSVSLRDSAFYRFFDVEYLDDSERNCEKWDRMPLVARRILCFDLKSVTEMSIFLRRETIEIVRSLGTCRHWPAKICVAAETNEILRSNTENLANTSLDNFQNLKNPTSQIGGKNDFSEKASDRPAEKSNLEDLSEFRQRSSVNSDSSFDLSDLDIDEEDEEMQQKLRRFEEEVLGVAKTDNSKNNIADLIKKSGNRTDSANANKTDSNNQSSTEATNEPKKFESEKSEKKGRKCGKTRRKRMFERDEADLETENLVKAEISSKRSHRRGPLVTHSDEEDKSAVEDFAQKNADGNDFARNFNAEDFIPDFEEEDRLDFVQQYNSSENRPQPDLGATGAAEQTQKEKTKGFFNENEVRNYVEASDHNGDVKMAEDFRGKEEDAIEVKIDRLEDEENWKRSLKRNALIRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND4</accession>
    <name>A0ABV2AND4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">choline-phosphate cytidylyltransferase</fullName>
            <ecNumber evidence="8">2.7.7.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">PCYT1A</name>
        <name evidence="10" type="ORF">MHBO_002737</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cytidylyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.15" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010001119">
        <property type="protein sequence ID" value="MES1921167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004105">
        <property type="term" value="F:choline-phosphate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02174">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041723">
        <property type="entry name" value="CCT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045049">
        <property type="entry name" value="Pcy1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00125">
        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10739:SF13">
        <property type="entry name" value="CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10739">
        <property type="entry name" value="CYTIDYLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="6" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cytidyltransferase-like" evidence="9">
        <location>
            <begin position="40"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00026101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="287" mass="33804" checksum="D284E34C15EDF941" modified="2025-10-08" version="1">MTKPDKRLEKNSSNDDIRRRGIKRKAQSDFGQEGYYRIYLDGIFDLFHFGHARLFKQIKTRFPNSTVIAGVCADDLVNKRKGKTVLNSEERYESLEHCKWVDEVIQNAPWTIDQKFLDLHKIDYVAHDPIPYTTGNDKDTYSYVKSIGRFIATDRTEGISTSDIINRVVKDYDKFVRRNLKKGYSRQEMNVGFLKEKRIKVAGKMDEMRNKVDQIKNRVKDKGDEVFDSSKNLVEKWYENSQKYIDEFLQMFGRDGRINAFMKNKVNSIEKKIKDITKIPKKKTKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND8</accession>
    <name>A0ABV2AND8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001131">
        <property type="protein sequence ID" value="MES1921181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="23211" checksum="D12428305056217B" modified="2025-10-08" version="1">MSYGYVIKLFDEIDEKLFFKMDGNSKLLHLLIILITEKNFFQPKLFKIFCDHFMKIIDTNMGKIIIELFLRRTKLENSHNNAINLFDEIIDCDDLYTENIILNYLKHCCESSQCSKILSKLKSPYEILKTTKKSDFVNFLAKIDKIDIVIESLLKHSNLDNFLKQKDVKTNLDSINKSKFGSILQQKWKDKFNKYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH8</accession>
    <name>A0ABV2ANH8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002783</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001165">
        <property type="protein sequence ID" value="MES1921220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14370" checksum="8C9C68F2A220E9CA" modified="2025-10-08" version="1">MRIGMFIKDVTSTSISLVKEFPTGFTTLKFTVSLLPNMRKPVENKNFFEDKVTFMNPMIFSTGHMMEGGLGPSLRQVIKIPWSCQRRNVSRTVRTDFGGVVAFKRKTERIMKGTNHLKSSSDRGNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM8</accession>
    <name>A0ABV2ANM8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">polynucleotide adenylyltransferase</fullName>
            <ecNumber evidence="3">2.7.7.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002657</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the poly(A) polymerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.19" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001057">
        <property type="protein sequence ID" value="MES1921059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.590">
        <property type="entry name" value="Poly(A) polymerase predicted RNA binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011068">
        <property type="entry name" value="NuclTrfase_I-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007012">
        <property type="entry name" value="PolA_pol_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007010">
        <property type="entry name" value="PolA_pol_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10682">
        <property type="entry name" value="POLY A POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10682:SF10">
        <property type="entry name" value="POLYNUCLEOTIDE ADENYLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04928">
        <property type="entry name" value="PAP_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04926">
        <property type="entry name" value="PAP_RNA-bind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55003">
        <property type="entry name" value="PAP/Archaeal CCA-adding enzyme, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81631">
        <property type="entry name" value="PAP/OAS1 substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Poly(A) polymerase central" evidence="10">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Poly(A) polymerase RNA-binding" evidence="9">
        <location>
            <begin position="52"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="Poly(A) polymerase RNA-binding" evidence="9">
        <location>
            <begin position="130"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22478" checksum="0CE3C6418E901C40" modified="2025-10-08" version="1">MPIITPSYPAQNSTYNVTFSTFAFLREEISRAREIFKSGKDDIFEKLIEANTFFKNHKHYFQISGTCFIEEDFTAWFGWIESRIRRFVGTLEEILYFKLVPFPQSFNHDLEKQKNISFFIGSKIIIDKNEIKHNRNNKRKKINIVPAVKAFVKHINDFNSKTEGMSVKVNYISKSKLPDFVFASNGKRKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV1</accession>
    <name>A0ABV2ANV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002714</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001102">
        <property type="protein sequence ID" value="MES1921134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="297" mass="35220" checksum="4EF31009C8B3278D" modified="2025-10-08" version="1">MDTSYENEDDSVKKQNDITKKEQEFIERHEKQRQQKIMDRIKKEHEQNLNNYLMTTSDEMEHLYIDDCFRFQRITEEEMEKMLKNIDDRNLEAIVHNINLFFFDRRDDLKSGRSFANLFLKGVAFFATTAKFIEVKSEIYEIAKIVVAMNSASSKAGYVEELNRVAAKVASCNLFLSKWTVNFLKNNVHFCDFLCENYGEESNLLFDLYGLTHLIQYEDFQLPQNGRSRRAISYIMENYTAKHRYKDLFDILENISNQSCVNCNDLFTLRNKALILLMYLARSNFIDSSELVKHYCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY7</accession>
    <name>A0ABV2ANY7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002696</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001091">
        <property type="protein sequence ID" value="MES1921113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037869">
        <property type="entry name" value="Spp1/CFP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46174">
        <property type="entry name" value="CXXC-TYPE ZINC FINGER PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46174:SF1">
        <property type="entry name" value="CXXC-TYPE ZINC FINGER PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="7">
        <location>
            <begin position="12"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16663" checksum="A5D6273B0A5CEB3A" modified="2025-10-08" version="1" fragment="single">MVENKNFTENSGLYCICKNSNNRMKSMIGCDECFGWFHYNCVKITIGEAKRKTKYLCPKCTKKFNPKQKNDVKTEVFKYYEFLSDDAEENNQTQILAKRINNINLCKKNKPKTEKEIFLNFPFHLYRFKLKNVETIENSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP45</accession>
    <name>A0ABV2AP45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002986</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001362">
        <property type="protein sequence ID" value="MES1921452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6260" checksum="83A97D873820EF8C" modified="2025-10-08" version="1">MYPDNIIGGNSSIKTHRKGTTTCLIYRKKGKSHQSVLRVWGSSEMLTKLPAESHES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP56</accession>
    <name>A0ABV2AP56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001359">
        <property type="protein sequence ID" value="MES1921451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="134"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17946" checksum="9C1643D3DF483254" modified="2025-10-08" version="1" fragment="single">KGVTASQYAELYGHIELFSYLRDFPLSPSKKSPSKKNLFDNSRLTIKDTDDDLLYLSEESANCETSLSGDYLDKEIKSDSEILLETHSDASDSSEEQNVGNLAFRQNNKNLLKHFENVNKRLFKFEQKSGKCNFYIKTAICGIFISIIFRFLIKFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP86</accession>
    <name>A0ABV2AP86_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">K Homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003013</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001405">
        <property type="protein sequence ID" value="MES1921483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="entry name" value="K Homology domain, type 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="48"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="146" mass="17024" checksum="E8D912BED5461F81" modified="2025-10-08" version="1">MDQKSNNAKSKNGENNKNDKKLQNYKKEETKTKKKRRSRFDDAPPGQPKHKKIAKKPVTKKDRKMEKILKEAEKFAEKSRTNQNSFEARIPIPDELVQNKAINFVGLVIGPSGMTQKKLQRDLQCRVNMFSKKITISKNNYFLMKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE4</accession>
    <name>A0ABV2APE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003068</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001467">
        <property type="protein sequence ID" value="MES1921541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.1800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003903">
        <property type="entry name" value="UIM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02809">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00726">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50330">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12071" checksum="83DB15223C5BCC05" modified="2025-10-08" version="1">MVSVSEGESLADTAFGKFAKVPQNGSAEMEDDPELALALKMSLEENQQATKTESEPMETEEDELAKAIAMSLSNLPDKSEKQQIDKLIGDKDFLSNLCLTSTKTTLISTKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX8</accession>
    <name>A0ABV2APX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MYND-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003266</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prefoldin subunit beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001699">
        <property type="protein sequence ID" value="MES1921737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002777">
        <property type="entry name" value="PFD_beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024119">
        <property type="entry name" value="TF_DEAF-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10237">
        <property type="entry name" value="DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10237:SF14">
        <property type="entry name" value="MYND-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01920">
        <property type="entry name" value="Prefoldin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46579">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01360">
        <property type="entry name" value="ZF_MYND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="6">
        <location>
            <begin position="7"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17623" checksum="DF6EB87612218CF3" modified="2025-10-08" version="1">MDSKKSCDKCKKNTEKLKKCGACKKVEYCSRECQKSDWENHKKICSFSPKNKISAKISQREKIIDKFVKEEKIKKFNFKIEAMRKSKKLLNDVIDEIEISLEDEDPFMIKVGNAFMRVDQEKALEFSNTKIQYLENRLNHFESKISEIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQB1</accession>
    <name>A0ABV2AQB1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003058</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001451">
        <property type="protein sequence ID" value="MES1921532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051175">
        <property type="entry name" value="CLK_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45646">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE DOA-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45646:SF11">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE DOA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="53"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22185" checksum="9B28B9709C5F3E1E" modified="2025-10-08" version="1">MGRQSISKNKRRKIALSDKIVSSSKSVISDKDADDKNSGLIKISAGDVIYNRFEVLRKCGQGTFGTVLSCYDKNKQKKVAIKAIRSVRRYLKSADIEIKILEKIYKADLHDDSLCVKLRKSFTDHVHGRRHKFIVFEKLGCSLYDFISQNNYKGFSLRHVKEFSYQILKAVRFCHRMNLIHTEFFLILKPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF3</accession>
    <name>A0ABV2AQF3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001910">
        <property type="protein sequence ID" value="MES1921895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11920" checksum="5645C29C57D660AF" modified="2025-10-08" version="1">MTTQKNANFQNCNKKGDAESWKVEGFCKSHKGQITENKKKSNLTKDELRNAEKLIDEIVDLLTNAFSGSQNVFILPNLEIDSENDFNENFEFCQNRIEKFLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF8</accession>
    <name>A0ABV2AQF8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Dolichol-phosphate mannosyltransferase subunit 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003249</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Component of the dolichol-phosphate mannose (DPM) synthase complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Endoplasmic reticulum membrane</location>
            <topology evidence="1 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the DPM3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001675">
        <property type="protein sequence ID" value="MES1921719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013174">
        <property type="entry name" value="DPM3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08285">
        <property type="entry name" value="DPM3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="8990" checksum="6395EE9850008E7E" modified="2025-10-08" version="1">MINGRLNAFVFGAIALMLVAQWFNRSFFKSAFAISLISGLLLFAKTVEMVVSIRDCPEAFSELQEDVKLATTELAKTGITAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG8</accession>
    <name>A0ABV2AQG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003443</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001934">
        <property type="protein sequence ID" value="MES1921915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="170"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="27339" checksum="BC124C3EBCDDB24F" modified="2025-10-08" version="1">MTFKSQNSSILKLKKRIHRRYSTNINISRNETIFHFSYSIVFLLTGFFVLFSHLPDKPWKFSVLEKWFDSPPKQSLVLKSLLMSTCVLSAFQAIFIIRKWWKSFLPTNLTIGYLLLRVTVSVVLLCSAASGLDGLLLLTFLLLYELPQIPSLCARLFVEENERLSETDAKLFSAHFILFVATRILAALFFNGILIPFAKIFATKFLALLFILVSISSGLFQILSRLRKTRIYNLLSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT6</accession>
    <name>A0ABV2AQT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002123">
        <property type="protein sequence ID" value="MES1922038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="30714" checksum="6A9B3CBF0E9F01BC" modified="2025-10-08" version="1" fragment="single">SVEINYKNGARKNASWFEISLDAIDCLEPDNEIIKTYRCLNGEPSLNASIKIAISWHCPEENYKNNIFKLCKIQKKLNEKRTMKESSEISKLKIKLSKLQNIPETVQILSIVLGDVKRVFRIRNESDLLLKDHFIVSKDSHKILKILLCSDNALYYGSINTSEQKNNKITLHPLATTTEHTSKNSDREEIRKLPQIHIEMAFSKVGNLKRNEKAVMKLKMSRLGLSLIKNGEELVYVCISDLFLRLSEYDKKFIFKALIGSLQIDNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX0</accession>
    <name>A0ABV2AQX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001898">
        <property type="protein sequence ID" value="MES1921884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="18042" checksum="8BE467E80656E5D4" modified="2025-10-08" version="1" fragment="single">MICVCKNNQKLLKISDKNQTDLDNVKKTEKVGKMVSFGNTENKHLFEIYLENKGFLGIGYFNGKYKNIPFMKRQKFEDKIRMINAFWSTQFDIYRLFLVIPMIIFLLTFCMSFSLFLINKNLVCYSGTIFFTAATFYCFMRFFVVRFFFIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE1</accession>
    <name>A0ABV2ARE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003723</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002398">
        <property type="protein sequence ID" value="MES1922212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15197" checksum="B3930A276177675D" modified="2025-10-08" version="1">MRYKENFGPAKILKSSSFEYSIKQEWLNLAEQKKFFSDQNNQKEIRESIFFKSIEINYDFLYKDGKDIFVLTKNRFCSISEHFKAEKDNWKFSFAKGIFAAWLSVCCGLFGVDFMKKFIWFHDDSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ4</accession>
    <name>A0ABV2ARQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Calmodulin-like 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CALML3</name>
        <name evidence="7" type="ORF">MHBO_003866</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the centrin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002653">
        <property type="protein sequence ID" value="MES1922360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050230">
        <property type="entry name" value="CALM/Myosin/TropC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048:SF59">
        <property type="entry name" value="EF-HAND SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048">
        <property type="entry name" value="MYOSIN LIGHT CHAIN 1, 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="8"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="44"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="81"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="117"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17039" checksum="4ED6CF179FF0654E" modified="2025-10-08" version="1">MDENKELKKVDEIKEAFELFDKNGDGTISALELGQVLRSLGQNPTESELNDMISEFDSNGKGNIDFEDFKRIISTHKSEFSAKSNVKEAFKAFDKDGNGFISLEELKSAMESLGEKVTKEELQEMVKIADKNNDGKIDYEEFVEIMQHEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS63</accession>
    <name>A0ABV2AS63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002921">
        <property type="protein sequence ID" value="MES1922482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21169" checksum="95BDEC69FD70A85D" modified="2025-10-08" version="1">MDENKNGFEQSSISDSKDLPERLKILVKQLKRGIHNAEILDETLKKMSEQFHNSGSVLKKISEKSTAKTSRKNLHDYVDKDCMNTYSAINILGDNHLRISDEINELIESKYHTGLENLRLRCKTLDKQNGECVASLRKQRVNIELLKQRAIKKITNEFEKDYNIRTNGTPSKQRLSVMVRFGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP7</accession>
    <name>A0ABV2ASP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Piwi-like protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PIWIL1</name>
        <name evidence="2" type="ORF">MHBO_003915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002733">
        <property type="protein sequence ID" value="MES1922402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.260.10">
        <property type="entry name" value="paz domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003100">
        <property type="entry name" value="PAZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036085">
        <property type="entry name" value="PAZ_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22891">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02170">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00949">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101690">
        <property type="entry name" value="PAZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50821">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAZ" evidence="1">
        <location>
            <begin position="122"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="31996" checksum="AFF3D6518AED8D15" modified="2025-10-08" version="1" fragment="single">SSIIHVILQRATNQAGLVKIGRSYYEKEMMNEDEFLLKDYNIRLFRGYSMNIEQTMKGLQLTVDLSHRVVSTINASDLIDSFDKNLKPLPPGGMTKGAPVKQHKGEVLRGYHRGVPTMNKAFAANQMFDDRDKENTPEIQRRAEEELVGRSVITTYRLRNWRIDAIEWDKNIDSTFSWKKKSGETVKISFRDYFYTNYRLKLVSKRFGMLVSMPKSRRGKGPDKFYLPPEACYLTGMSKKMKADFRMMKRVRDIVSLTPPKRFEAIENITRDLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT12</accession>
    <name>A0ABV2AT12_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Band 7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004306</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003697">
        <property type="protein sequence ID" value="MES1922782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="172"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="234" mass="26305" checksum="591CDBF269A8FF2B" modified="2025-10-08" version="1" fragment="single">MLYDVTGLNRVRDGSSPQAGALVGTQKIALAMSNNATKHILNGALTILKNTSEIIISRIQQMALYGQDLNTAIKGALGERNVKVLQEANKLHLYEFSISIEVDMDEEERMNFDRLIESALTSGAIEIPDVIDLKATKNIKLASEYLKIKITRRKKEVQKYKEQEIQVQAQSQAQAQIAVKQAEQQALQMQMQLEQVKSQFDAQKEVMILGKQAEMDIMLENLKHQHAMEIQGLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC8</accession>
    <name>A0ABV2ATC8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Eukaryotic translation initiation factor 2 alpha kinase 4</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">EIF2AK4</name>
        <name evidence="3" type="ORF">MHBO_004436</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010004002">
        <property type="protein sequence ID" value="MES1922907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd23823">
        <property type="entry name" value="RWD_GCN2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040213">
        <property type="entry name" value="GIR2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006575">
        <property type="entry name" value="RWD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12292">
        <property type="entry name" value="RWD DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05773">
        <property type="entry name" value="RWD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00591">
        <property type="entry name" value="RWD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50908">
        <property type="entry name" value="RWD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RWD" evidence="2">
        <location>
            <begin position="26"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="187"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="188"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="202"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24287" checksum="0629F956662B880E" modified="2025-10-08" version="1" fragment="single">MQKQNNESLSDSSSNAMLSSSDERQTEITVLKSIYADEIKEKNKYNNYSPYCFDLQIVATSQSNTERSAVFQFSLGVNYPRKEPRIKISDDFNLTTSQRKQLLSKILANARESKGEAMIHKLALAAKDFMNNLDVTKKDGKDEKGEKDIELQEAIDEAIEEKKKKAQIIEDENSSFMDIFIASHSVEENMDDQNDFEESNTSEHLYSPTDNTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE9</accession>
    <name>A0ABV2ATE9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004196</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003389">
        <property type="protein sequence ID" value="MES1922673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9780" checksum="4D439D7ECCD01729" modified="2025-10-08" version="1">MNIGGRSFRKINNKLKKSMKLFEEAGGNSLSADKVRQLGEIEQVKKLQTEKSSKEQTLKNIENNKVVRKTLRKMRKVLQKFLFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI6</accession>
    <name>A0ABV2ATI6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004245">
        <property type="protein sequence ID" value="MES1922983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="135"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="25514" checksum="1B2B2687D80EED87" modified="2025-10-08" version="1" fragment="single">FIARILNLNDLDENSNFLFETVLKFVYIGILECANGHLDKKTETIFLKNLHSRFEPKLKLPQNPISNFLSKTKNDYTSLEDSSKPKFQSGNNVYSVIESICRMNKKKSNRMAKWILFHAAKLSVEIENIVLEYYNDLCELDVNKEKDENEKSEERIARVKKAKELATAFVKAKTKKFCEKNDLVFQEEKNGKKDEKICIFCRSKNEENEETELVYLSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM0</accession>
    <name>A0ABV2ATM0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Immunoglobulin I-set domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004529</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004285">
        <property type="protein sequence ID" value="MES1922997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036179">
        <property type="entry name" value="Ig-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013098">
        <property type="entry name" value="Ig_I-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07679">
        <property type="entry name" value="I-set"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48726">
        <property type="entry name" value="Immunoglobulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Immunoglobulin I-set" evidence="1">
        <location>
            <begin position="4"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="7479" checksum="1906BFE54007BEBC" modified="2025-10-08" version="1" fragment="single">NGIWKKNGTVIQVEGSTKYLVTNNGMKDSVLVVSCLEETDEGTYTFSIENRSGRGESNAVSFKSNKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ0</accession>
    <name>A0ABV2ATQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Voltage-dependent anion-selective channel protein 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004586</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004489">
        <property type="protein sequence ID" value="MES1923053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="171" mass="18225" checksum="BFBA793CA9077601" modified="2025-10-08" version="1" fragment="single">AKPADAGLKHEVSSVWDILKGTLKYSMLYKTIHGTEFGLHALHNMNTNKSTGLIGCKVDGTSVAAGIEADKESKSAICSLGTETLNCKMKINANKFELNGKYQNFGAGLSLEKEKGDLCVKAGVNCSSEHESLGCSFGLGFSTRSGIFAEGSFKICGFPVFSVDTRKSFLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR5</accession>
    <name>A0ABV2ATR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004588</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004492">
        <property type="protein sequence ID" value="MES1923055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="14211" checksum="C8F98F0B09C3D63F" modified="2025-10-08" version="1" fragment="single">KREIVRQKREWQKLIKNKQGRRQMDEHNPSAKILEDNLVLEEEKNPSHKSRRISLRNKIRKNLLSESFKEMEKEYMERKQNVDEKEIGETSSCDGFHYNEKGFIDGSSQYCQYCNCLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU30</accession>
    <name>A0ABV2AU30_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FAM50A/XAP5 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004701</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004921">
        <property type="protein sequence ID" value="MES1923157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048337">
        <property type="entry name" value="FAM50A/XAP5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007005">
        <property type="entry name" value="XAP5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12722:SF0">
        <property type="entry name" value="PROTEIN FAM50A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12722">
        <property type="entry name" value="XAP-5 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04921">
        <property type="entry name" value="XAP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAM50A/XAP5 C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14361" checksum="936E55A4EEAA2CE6" modified="2025-10-08" version="1" fragment="single">IEKGKTIGNFLEIVKERLSDVFMEFKSVPTDELLYVKSDSIIPHVFTFKFVKLKNYTFYELIATKALGKSGSLFILDEAVEEIDDFGNKISVQRDECHCGKVVIRSWYDRNIHMYPASNWDNVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU40</accession>
    <name>A0ABV2AU40_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004726</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005026">
        <property type="protein sequence ID" value="MES1923181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="63"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="19512" checksum="E8672A28095D3D85" modified="2025-10-08" version="1" fragment="single">LSNLESLVLTKKASRIQSREDRLRRREDLLELEDDDSDKEQAEETITTENMLEPMKKIGVEQFSLLKVVGRGSFGKVLQVRKKDDGQIYAMKILKKSDIMYQNQMEHTKAERKILQVIQHPFLMKLRFAFQTKQKLYIVIDFYKGGELFFHLKKKNRFNELEASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU43</accession>
    <name>A0ABV2AU43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004731</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005032">
        <property type="protein sequence ID" value="MES1923185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6423" checksum="3A85B2999D2B21AF" modified="2025-10-08" version="1">MESPKVELGIGFPTIVEGQQTVGELPRVQNLILQVGGSPYSDALLPLTRPWVAVEECFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU70</accession>
    <name>A0ABV2AU70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">STE20/SPS1-related proline-alanine-rich protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">STK39</name>
        <name evidence="4" type="ORF">MHBO_004749</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010005085">
        <property type="protein sequence ID" value="MES1923206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050629">
        <property type="entry name" value="STE20/SPS1-PAK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48012:SF16">
        <property type="entry name" value="NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48012">
        <property type="entry name" value="STERILE20-LIKE KINASE, ISOFORM B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16582" checksum="A5530CA836FF9A9A" modified="2025-10-08" version="1">MAFGKPPYAQHSPMKIMMLTLKNKPPSTTTFGEKGSKISRSFKNMVDICLKKDAARRPTAKELLKHKFLKKSQGKDYLRTHLFDENKDLKETKTENMKNGDFSDKVNENDKSRKAVSVGNFNFDGFDKELIKDSKKSRFIVEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK3</accession>
    <name>A0ABV2AUK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Splicing factor 3B subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SF3B1</name>
        <name evidence="3" type="ORF">MHBO_004914</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SF3B1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005770">
        <property type="protein sequence ID" value="MES1923350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038737">
        <property type="entry name" value="SF3b_su1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12097">
        <property type="entry name" value="SPLICING FACTOR 3B, SUBUNIT 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="2" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0747">Spliceosome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="17721" checksum="BF0D7EC14F520E03" modified="2025-10-08" version="1">MTFLFEYIGEMGKDYIYSILTLMEDALTDRDLVHRQTACTAVKHIALGVAGYGYEDAMFHLINMVLPNCFETSPHMINAVTEAFDGMRLALGPGVVIHYLLQGLFHPARKVRTIYWRLYNNLYIGSQDSLVAFYPDIPNSEDNVFHREELDYFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK9</accession>
    <name>A0ABV2AUK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004902</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005707">
        <property type="protein sequence ID" value="MES1923341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="19256" checksum="0E854015D2C922F0" modified="2025-10-08" version="1" fragment="single">MWADAEAKIIINMAAWASKNTTGVKTLDSDGYIECYSAAVCTISGGPSGYDVAKVLDSAGVEVYLTPIGQAAPSSQGTTSPSFNIIGTVVDQPNIPDTNKAAVVYGAVANLGFNGSAFHVFAKTANNKLAGTLVTLNAKISGFVGNYVVADNYGSPQYVPVVFTKTIAPADDLSKLESYVISGKSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU5</accession>
    <name>A0ABV2AUU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004712</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004969">
        <property type="protein sequence ID" value="MES1923167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="19196" checksum="E1C33F958DDE4E7B" modified="2025-10-08" version="1" fragment="single">MPSSFIKDVSWNLLMKSDDDLTMRKDLGFTKYFAKNKKISQKKKNSVLTKLEKKELLTNKNNEIFKSPNFYISNQAVLRKNSLELNQRKSFHLFANEKIDLLNRKFTTKEKDGLKNIFITYTDFNLDYEKIAKLIEYPCVMMQGWLEIQRPFKEPKNFDSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV36</accession>
    <name>A0ABV2AV36_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF551 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006477">
        <property type="protein sequence ID" value="MES1923499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007539">
        <property type="entry name" value="DUF551"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04448">
        <property type="entry name" value="DUF551"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF551" evidence="1">
        <location>
            <begin position="56"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="14911" checksum="C54AD4AF44F7FEB0" modified="2025-10-08" version="1">MSEQRLIDANDFMAVIKKHDYLLVDDINSKDVGMFTIGIQQAVDEAPTIEPPVPQWTSVEIGLPEDFYKEIYAENQVPCVTVTNGYWIAMAYHANDIWVFAEATNAKIKIDWTEITHWMPLPKPPKEETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV52</accession>
    <name>A0ABV2AV52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006739">
        <property type="protein sequence ID" value="MES1923537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7353" checksum="CE97F7FFFC0DD3E3" modified="2025-10-08" version="1" fragment="single">YIQDIKNVDEVLDIDGEAIPLLKNHFRVYRDGKAYEVVVDNTLFEGIKALSSTTEQNIVTDAVKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA8</accession>
    <name>A0ABV2AVA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005182</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007003">
        <property type="protein sequence ID" value="MES1923586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="6169" checksum="CAD705D0C8CAB81E" modified="2025-10-08" version="1">MYIFRPKDVPIYSGKLCMRKLDFLHIIRFNITYTFSTWISRYHVMNTHLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC5</accession>
    <name>A0ABV2AVC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005236</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007276">
        <property type="protein sequence ID" value="MES1923628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6381" checksum="56782E0E4B3091A8" modified="2025-10-08" version="1" fragment="single">DTVNDKSVCITANIHKGVPYNVLVCGRIVGRRLNPETGKRDDYNKDIPIVQRFEPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC9</accession>
    <name>A0ABV2AVC9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">P-type ATPase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005234</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007265">
        <property type="protein sequence ID" value="MES1923626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032631">
        <property type="entry name" value="P-type_ATPase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16209">
        <property type="entry name" value="PhoLip_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase N-terminal" evidence="2">
        <location>
            <begin position="51"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14176" checksum="99D75BC6BC6E21B0" modified="2025-10-08" version="1" fragment="single">MEPKVNKEMDVYIHFGRIQTYDDHDTCEICHTKEPTRLERFLAATGIEQNKKNAITSTRYSPVTFLPMSIINQFRRPSNIYFTLILILSFTKYSSSSPAFTFIPIFVVFSISILKDFYEFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF1</accession>
    <name>A0ABV2AVF1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Deoxyhypusine synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the deoxyhypusine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007367">
        <property type="protein sequence ID" value="MES1923638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.910.10">
        <property type="entry name" value="Deoxyhypusine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002773">
        <property type="entry name" value="Deoxyhypusine_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036982">
        <property type="entry name" value="Deoxyhypusine_synthase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11703">
        <property type="entry name" value="DEOXYHYPUSINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11703:SF0">
        <property type="entry name" value="DEOXYHYPUSINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01916">
        <property type="entry name" value="DS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="DHS-like NAD/FAD-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="82" mass="8731" checksum="684485F5C136A6D7" modified="2025-10-08" version="1">MIILGGGLVKHQICNANLMRNGADFSVYVNTGIEYDGSDSGASPDEAISWGKIRGDSCKPVKVFGDATIIFPILVAMTFAKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF4</accession>
    <name>A0ABV2AVF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004928</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005828">
        <property type="protein sequence ID" value="MES1923363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6395" checksum="9EEC070227C96D5A" modified="2025-10-08" version="1">MQPMDQRSEGKLQPSPRITSGALYWRVLIMREWWSSSNVAPPKSIKRMSVLHGNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEM4</accession>
    <name>A0ABV2AEM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000020">
        <property type="protein sequence ID" value="MES1918150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="707"/>
            <end position="727"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="739"/>
            <end position="762"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="800"/>
            <end position="822"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="831" mass="96736" checksum="7A0D41BCD995B012" modified="2025-10-08" version="1">MDTELTESICSSEELIEFGLNGLPFIKRKFTDDLTRRIIELRFRKMNVTKRLEAAHNFFRNFSMANYLKWGELRYRDEFDTFLNKLFNVMWKWRGFPEITFLLSKISILSINHRLKTPSMYLKIYMRNCYSAWANESVHFSMRVNEFLAGFFKKEPLIDILQANRTIGDDMHMHVQISGIEEAVGKSGLAKLEMAITPARKGLQKYLAKNNISFLESTATEFSLTVVYSVQYTKADKNDILKKLHDWLQSICPLIDKIHIQIDEDKLKVQIDFRKNDLNISNIMEELIKSLTSILSNVYTFTHLNGNQNGNDSTNHYILRQIYDKLAKLTSKHISLLEKDENFVKWVHCLTHFLLNNENYPEKSHPHASYHFIRTVEAVKTTIKEKLKLGDESLVENELAKYLTELNNILSLLEKSRSDNDENDVVVIKESEKSESFFVMTLVQYDVSAKSQKTVKDDLECKMKRDLECEHLVVTKWASRIDNGKTFVDVQFKVPEDKNRNIEERLLTSERSLLDKVNLVEQFGNFFIPNDDANLVNINESVKFLKRPFMGIDSLLKILLYGEDIHVKSKKAFLKQQQWQLTKDDDIIKLFSGGAGNISKYSISDISRTIMRNISHSVPPKKRLIEYNEVEALIKATMAKNISLGLKDYNIPFVMVYSHYMAFRRKSETLELQYETKSDRSAATGSQNCGKTQQQVKDMKKKFGIHLIFRFILNLISFLPIGLPIVIQNLRIQKFVPFIYSLAWAFALILEMINICFVKSTFDDPSKNIRKSEDNNYYLTTKGKILNVVRITKFAMRTFLYSNLILFLSGVYLILITEFAFIEILDNKHVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF40</accession>
    <name>A0ABV2AF40_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Translocon-associated protein subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12861:SF3">
        <property type="entry name" value="TRANSLOCON-ASSOCIATED PROTEIN SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12861">
        <property type="entry name" value="TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05753">
        <property type="entry name" value="TRAP_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047025855" description="Translocon-associated protein subunit beta" evidence="2">
        <location>
            <begin position="17"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="182" mass="20197" checksum="ECF7A215438BE4A7" modified="2025-10-08" version="1">MGTLFLLLVSCHSFLTVNKNYKYSDLAVGSPIEVSIDIFNKGKLDVSDVFLRIGENRKKFIVDSSIVSLQENGDLKIEKIKQGESFKVRFNLIPNQVGKFKAEHATLSYTENGKTIKATSGTNIKVLRIKKEGKFEKRNISTVQLNLIQTSFLVYAGFLTTAVILPIASFQVSGLCGKSKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFC2</accession>
    <name>A0ABV2AFC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000169</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14429" checksum="12868FF59036ED3D" modified="2025-10-08" version="1">MIKAHFDEHKKAVFAKIASVAEETIESEEKQTFQSGLDGDLSQNMKSFVRKLRYLKKNTFDYLGDLEQNNLQEVVHGAFERKIQTLIRKHKIEWGSADLNYLKEHFKMIWGSNDALEEMFAEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH2</accession>
    <name>A0ABV2AFH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="15">U4/U6-U5 snRNP complex subunit lsm6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">LSM6</name>
        <name evidence="15" type="ORF">MHBO_000390</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 13">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the snRNP Sm proteins family. SmF/LSm6 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01726">
        <property type="entry name" value="LSm6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016487">
        <property type="entry name" value="Lsm6/sSmF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11021">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11021:SF1">
        <property type="entry name" value="U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006609">
        <property type="entry name" value="snRNP_SmF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 13" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="10 13" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="11 13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12 13" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="9 13" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="8 13" id="KW-0747">Spliceosome</keyword>
    <keyword evidence="7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Sm" evidence="14">
        <location>
            <begin position="7"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRNR" id="PIRNR006609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1918423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="79" mass="8906" checksum="D086FC7A6C59A8AE" modified="2025-10-08" version="1">MSAIKTTPVEFLKKVMGNQVVVKLSSGNEYRGILTTLDGYMNLTLEQTCEYESNRLKSKFGDAFVRGNNVMYISTCENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV4</accession>
    <name>A0ABV2AFV4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000493</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000078">
        <property type="protein sequence ID" value="MES1918535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="160" mass="18797" checksum="7A91455685594AFF" modified="2025-10-08" version="1">MSENPNKSNVNGKNMDKIWSTEISFINKLHPFELKFLHFVDKSLKKKLTDDFCSNFEKFVSNMPETASSCFADDICLLLMEKIDISDETNENDKILNLISILSKRFRICRSLNELFILYPLATYKNLNLSQKLLKTIFRSLNIRNPLKYWDLTSLRKPCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG66</accession>
    <name>A0ABV2AG66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000065">
        <property type="protein sequence ID" value="MES1918459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="146"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="180"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23112" checksum="4D4E575FA0641462" modified="2025-10-08" version="1">MDKSLSDFGISDDRNKNKNKQQRENPDRVAVNCVQALLGFVYLGCALGLTITILVYPNWTSFATDKNVSVYIGITYFSVANLNRWYKYSDYADPNLYFICGNDCENFRDSNYILLGLFVTVAVILSVLKIVLLVKICLNQKRIIKWIGAFLVAAATVLVMAAILKFACDEYSVINGHSKRYSYCFYMAISLNIYVPFSVIFFNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG85</accession>
    <name>A0ABV2AG85_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000614</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000106">
        <property type="protein sequence ID" value="MES1918686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="278"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="310"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="354" mass="40057" checksum="749134EDDC9F73CD" modified="2025-10-08" version="1">MSDPLNPNTEVPVYHPVLNDILFETKDNVDLTYNVNHGLIEMCSNPMKVQAKLNDLMAGWADSDSEKKKCSLLQNIWNILSKSILKNKALKCLFEGSYGTIKRCSENENNILELRPALDQMAINSSMYGMRFYDVYLSDSKEYARIPTVILVIITNTLEYSISKVAKHNLTDTYTSGELLHKLKASVKDCNANVNPANKETMEIYKKDVKDIDKAKSIQELENWAKNLINKVSDIAASNEPKTLFQQKQGGFLSRIKMFSGSLKEKLLEKFRSSKKAIFNYVISAIIGIIFIGFLLCGIILMYFDQKKGLIHLFGLLVGLSVGGQFDKCFAHFITGCCWPFYRCCFSASKHKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB3</accession>
    <name>A0ABV2AGB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000637</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000112">
        <property type="protein sequence ID" value="MES1918716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="13577" checksum="F9906CA45A96781A" modified="2025-10-08" version="1">MYNFNNCYPFNNYCQNDWNCLPQPCGNVCRPVIAGPPGPPGPPGKQGCPGIGLHGMRGCPGIMGPMGPRGDRGRCGNVGLCGPSGRNGVMGPRGAFGAPGCRGPKGACGPPGQCGKPGCPGKSYQKYYEPFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN1</accession>
    <name>A0ABV2AGN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000558</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000094">
        <property type="protein sequence ID" value="MES1918614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="101" mass="11890" checksum="4CF7849969B79F0D" modified="2025-10-08" version="1">MELTLLLHFLKIEIAVLLFLQLLLFVISIHSVAKIRQRIKTNKKIATKDIENHRNIKISNDIEVNSKDGSNQFDFFEEIQKTNLGYVSNKYYEDLYVESED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ5</accession>
    <name>A0ABV2AGQ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">TRUD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000727</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the pseudouridine synthase TruD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000134">
        <property type="protein sequence ID" value="MES1918827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02576">
        <property type="entry name" value="PseudoU_synth_ScPUS7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2350.20">
        <property type="entry name" value="TruD, catalytic domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001656">
        <property type="entry name" value="PsdUridine_synth_TruD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020119">
        <property type="entry name" value="PsdUridine_synth_TruD_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011760">
        <property type="entry name" value="PsdUridine_synth_TruD_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042214">
        <property type="entry name" value="TruD_catalytic"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00094">
        <property type="entry name" value="tRNA_TruD_broad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13326:SF21">
        <property type="entry name" value="PSEUDOURIDYLATE SYNTHASE PUS7L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13326">
        <property type="entry name" value="TRNA PSEUDOURIDINE SYNTHASE D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01142">
        <property type="entry name" value="TruD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037016">
        <property type="entry name" value="Pseudouridin_synth_euk_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50984">
        <property type="entry name" value="TRUD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01268">
        <property type="entry name" value="UPF0024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TRUD" evidence="4">
        <location>
            <begin position="92"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="409" mass="46612" checksum="CF1052FF98149874" modified="2025-10-08" version="1">MRLRPKLFSFCGNKDRKAVTIQRVCAKRITAKRVRDVSRFSRRLFVGDFEYQVRPLSLGQLDGNRFNIVLRKIEKKRKNDFEAISESIKENGFINYFGLQRFGSCSVPTHNFGKLVLKRQWDELVALILFTDEIGKLPTQHRKIAETLKNKKSFSEALKHCPKHLSVERPVLERLSQNINSRDAFNSIARQTKSIYVHAFQSYIWNKAASARLKKYGFSPVVGDLVVLGKEQGMAQSSGRKTKTLVRSLGKADVDSGDFSIFDVVLPLPCAGCELPRNEAGEIYEAELKKEGISDQLVEKLRKDRSLIIYPNYRPLMMRCLNFKSKFGSGLENSLPVEQPELIENGSFSEMVNEQLVDRTLGEEQSSKTVDCEKKSGIIIDREKFCAAQLQFDLPSSCYATSLLREFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV4</accession>
    <name>A0ABV2AGV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000616</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000106">
        <property type="protein sequence ID" value="MES1918689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19433" checksum="57C4724D30299FF2" modified="2025-10-08" version="1">MNDEVVGKIKTFSSIATNFESANVLVDNFPVSVKVPKGSQNARINKAVGGGGSFFFSVYNLSHYSNAKFDFWFCVNNTETYNDLFPQRNIFEKELILPLCGFFWGFENKTNKIILTEISDTQKKTSFEVKFRHKIDYKHLMFVVLRAIVFIEHHSSTELEMYEIDESE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW6</accession>
    <name>A0ABV2AGW6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">6-phosphofructo-2-kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000627</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000109">
        <property type="protein sequence ID" value="MES1918704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003094">
        <property type="entry name" value="6Pfruct_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013079">
        <property type="entry name" value="6Phosfructo_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10606:SF44">
        <property type="entry name" value="6-PHOSPHOFRUCTO 2-KINASE_FRUCTOSE 2,6-BISPHOSPHATASE LONG FORM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10606">
        <property type="entry name" value="6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01591">
        <property type="entry name" value="6PF2K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="6-phosphofructo-2-kinase" evidence="3">
        <location>
            <begin position="25"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18915" checksum="7755A54AFDF326E3" modified="2025-10-08" version="1">MSSQKSYHQFSENANNRRNIFRSLSISPHEESSKLIIILVGLPARGKSYISHKLSNFLNWRGHSCRVFNVGQYRRTEMSDEPRQNADFFSDKNSKNVEKRNIIALKVLEVAITWLNNKNGQIAIFDATNTTKSRRKALSEIIKKVIFNYLDNAPISLRRIDMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH14</accession>
    <name>A0ABV2AH14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transcription elongation factor A protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">TCEA1</name>
        <name evidence="8" type="ORF">MHBO_000502</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000081">
        <property type="protein sequence ID" value="MES1918547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13749">
        <property type="entry name" value="Zn-ribbon_TFIIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.30">
        <property type="entry name" value="Transcription elongation factor S-II, central domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035100">
        <property type="entry name" value="TF_IIS-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003618">
        <property type="entry name" value="TFIIS_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036575">
        <property type="entry name" value="TFIIS_cen_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001222">
        <property type="entry name" value="Znf_TFIIS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11477:SF0">
        <property type="entry name" value="IP08861P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11477">
        <property type="entry name" value="TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07500">
        <property type="entry name" value="TFIIS_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01096">
        <property type="entry name" value="Zn_ribbon_TFIIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006704">
        <property type="entry name" value="TF_IIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00510">
        <property type="entry name" value="TFS2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00440">
        <property type="entry name" value="ZnF_C2C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46942">
        <property type="entry name" value="Elongation factor TFIIS domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57783">
        <property type="entry name" value="Zinc beta-ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51321">
        <property type="entry name" value="TFIIS_CENTRAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00466">
        <property type="entry name" value="ZF_TFIIS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51133">
        <property type="entry name" value="ZF_TFIIS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIS central" evidence="7">
        <location>
            <begin position="50"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="TFIIS-type" evidence="6">
        <location>
            <begin position="168"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="23798" checksum="92C9BD2D8C8E4AD7" modified="2025-10-08" version="1">MADKSGIVKEKLISKILKSQNKSVVQKDSKNDINDKKNIKNINEKVRSVVREKISQALIAGLEMDVDKKDLEEIGSNIEAAMLAKFGNTGNNYKSKYRSLIANMRDKKNPEFNKNIATKKISAYKVVEISEYEMASSKLKEERKKEKEIAIKDSRSDIISQSTASTTSMFQCAKCKERKASYYQLQTRSADEPMTTFVTCINCNNRWKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH98</accession>
    <name>A0ABV2AH98_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Derlin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000183">
        <property type="protein sequence ID" value="MES1919033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="260" mass="29549" checksum="CDD2A65F6AB01B38" modified="2025-10-08" version="1">MANIDYRQQPLEAAKESVRNWLDETALVTKFFILLSIAGSFLSLTSVIGIDLVQIFANIPYKAIIGLQIHRLIFSWALPSSFFGGLFQALSLFTVLQKIEQKRGSVYLLVQILVLNFISQVALNIAKVLFAVFCLFFGLFVQVISVQTSVGMWVLFFNVLPIVLKEPFQERGVPFFLVKIPPVVYPFVLCVFFQFFGFNLDIVFGAVVGHLASYKYRYLELSSSQLKYLEKIWIVRVLRTRAKGFAVSDISEYDGLPVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD9</accession>
    <name>A0ABV2AHD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Polyadenylate-binding protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PABPC4_1</name>
        <name evidence="6" type="ORF">MHBO_000765</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000144">
        <property type="protein sequence ID" value="MES1918869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48033">
        <property type="entry name" value="RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48033:SF10">
        <property type="entry name" value="RNA-BINDING PROTEIN SQUID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="27"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="558" mass="64519" checksum="E86FEE55FE03C081" modified="2025-10-08" version="1">MKSKECEAVLNPKNESNPHENKIDEKASIFVKNLPKNVLEEDLVKAFQKFGKIVSVKIPKKRDQHLSFGFVNFLKENSKNKCVKEEISINGKVVDVFSRSKSDLKKENKLSNGLKIESEDETIFDLIQFFEKFATIRAICLLVDSFNPFHQKNIAFVFFENFEEMEKILSQKLKMGENALKMEKTDKIDALKLLNCKILYPLKLFKIRADSSYLEIKSVLEICGQIENGKLLYNNLDSVSNSICGYVFFNNVKSQEMALKMKRFKLKKQVFKVELPKTEEKLNNGDLDKKLDESKSLSENKNSENLVVVKIKENSKNGCKKQICDSFDFLQFALESKRSKRLIFELKKDEFKNSVKEKLALLNFIDNIKIIKKPKRWKNIIKQKEILLNFKAKLADRKKLQYILDFSVGESKKISFASILGWTNFDDLAKAEIVLNKFRQIDKNDYFKAHFAVTETSKNKNSIIVKNLAEKTQKDKIANRFGLYGKIEKIDFHSANNICSVGFQKAIEANQAFSLLQNDIDFFLDFGEVEMSLANIRRAKKRKIGNMRNLIVDKLGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH6</accession>
    <name>A0ABV2AHH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000991</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000205">
        <property type="protein sequence ID" value="MES1919126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3380.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002298">
        <property type="entry name" value="DNA_polymerase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057220">
        <property type="entry name" value="DUF7898"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046931">
        <property type="entry name" value="HTH_61"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048960">
        <property type="entry name" value="POLQ-like_helical"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133">
        <property type="entry name" value="DNA POLYMERASE I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133:SF62">
        <property type="entry name" value="DNA POLYMERASE THETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25453">
        <property type="entry name" value="DUF7898"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20470">
        <property type="entry name" value="HTH_61"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21099">
        <property type="entry name" value="POLQ_helical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158702">
        <property type="entry name" value="Sec63 N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA polymerase theta-like helix-turn-helix" evidence="1">
        <location>
            <begin position="3"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="POLQ-like helical" evidence="2">
        <location>
            <begin position="148"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7898" evidence="3">
        <location>
            <begin position="313"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF21099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="437" mass="50120" checksum="D2E655CFE102DBF5" modified="2025-10-08" version="1">MGSSLKPLKSCLLLKRDGFCRIILEAVASKAASNLKQIRKFVRATFLFSQFQIDKIEEKEGEHLSFLLENRFLVEQIKTQSPKFKKLDLEDQLVLSKPTLTLSKTQRKRKKDLLSNLWLDRRKMSSTKTKHYFSTQFGNATFFSGLNPSEAISIKKELDLARKGLVLKGNLHLCYLVTPIQYVSIEPDWAFFYQIFNSLSPIFAKTANRLGISEFYLSRCAYNPPSYQCMSPEAISHRRFFLALMLSEIINEKSLSEISARFGAERGQLQALQNSAAAMAATLALFCERLRWPVMASLLAHFCERINFGVQGELLPLLQIPHVKAFRARALFDSGFTTIEAVAEASKAQIKEAISRYQCFSAPDSKEGLLKERIERRTTELIQKEANALISQRLENMQGEFEETTELEKLDEQLQNHRMRETGKDFEMEEIDSIFDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP5</accession>
    <name>A0ABV2AHP5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001068</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NOSIP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000226">
        <property type="protein sequence ID" value="MES1919206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16449">
        <property type="entry name" value="RING-HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016818">
        <property type="entry name" value="NOSIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031790">
        <property type="entry name" value="Znf-NOSIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027370">
        <property type="entry name" value="Znf-RING_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13063">
        <property type="entry name" value="ENOS INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13063:SF10">
        <property type="entry name" value="NITRIC OXIDE SYNTHASE-INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15906">
        <property type="entry name" value="zf-NOSIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13445">
        <property type="entry name" value="zf-RING_UBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="8">
        <location>
            <begin position="205"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="290" mass="33722" checksum="B0B5C99C420BDDD4" modified="2025-10-08" version="1">MTRHSKNNTSLGYFTKAEKDKLKKDYGTIEARLDKRSIKNFCDCGICLKTAINPLCCNEGHIFCRECILKNILAQRKSHKNLKMAYKNHKASLKNKQNIEIEKAKTEALKTFEKTNNTLNFADSNSQLEVETKSLENEYDSSVWGLRKTPENKIRQIKKPNKLKIICPRKQKTSENTKMGTLDHQISFKKLAKISFLLKNGEIWCKICDRKINNNCQTVALVDCGHVFCQKCVEKALKNSKICIECEEKFKKYQKLEKGGFVIIFFKEADLRRMEIILKRRNIVSHLYLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX6</accession>
    <name>A0ABV2AHX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Cyclin-dependent kinase 2 homolog</fullName>
            <ecNumber evidence="2">2.7.11.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Cell division control protein 2 homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">cdc2-related kinase 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_001136</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">May form a complex composed of at least the catalytic subunit CRK2 and a cyclin.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.23" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000244">
        <property type="protein sequence ID" value="MES1919277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050108">
        <property type="entry name" value="CDK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056">
        <property type="entry name" value="CELL DIVISION PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056:SF0">
        <property type="entry name" value="CYCLIN-DEPENDENT KINASE 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="4"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00039612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00041902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00042858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="319" mass="36587" checksum="9169A8012ECCA817" modified="2025-10-08" version="1">MDRFKKLGKIGQGAHGTVIKCERKKVVLSTISFQNELENSKKEIVAIKKMKFSYLSNEQGLASQVIRELMYVQELRHENIVRLYEVFPHHKSLNLVFEYVPFNLEEIIHRERFSFSDANVKSFCKMLLSAIAHCHSKWVLHRDIKPSNCLVSCSGVLKVADFGLAKQFGNLEQALSPEACTLWYRAPELLFGSRLYGEAMDLWAVGCVFGEMLSRKVLFPGDRTVISQLSAIFAIRGSPDEGKWPGVTTLPNYFEFEKTAEVDLRTIFPLVGEEALDLLNKMLCLDPNRRITAEDALKHEYFERNPKEQKMKFGEKDEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY3</accession>
    <name>A0ABV2AHY3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein ENHANCED DISEASE RESISTANCE 2 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001151</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000250">
        <property type="protein sequence ID" value="MES1919296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009769">
        <property type="entry name" value="EDR2_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07059">
        <property type="entry name" value="EDR2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein ENHANCED DISEASE RESISTANCE 2 C-terminal" evidence="2">
        <location>
            <begin position="2"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10033" checksum="BFC1BF00B37D5C61" modified="2025-10-08" version="1">MTKTYSSSLAIDLAFTLEGREEEHLPEKVFCKLRINRMSNGSAIKIEDLERENIENIDESKVSFASADNVDKRKKKHKKSSTEIFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI15</accession>
    <name>A0ABV2AI15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000948</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000193">
        <property type="protein sequence ID" value="MES1919079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="27592" checksum="2FFDB21F9BD2B991" modified="2025-10-08" version="1">MSYKSGNDKLINRYLSKNNIDFMEKQKSEVKSEFENKIYKTKNFQTLKKSKKLAVSKKLFLTDNSNAIFINKELIRKIKNFGKTAKIDDGQNGLRNFNKLRSAWTGRLYISDELSSSFSMPSKIIENNKMGKNKKISYVEFINDFLTNYQKSVNYKSVHLKKTNDSRSRFCIDGICTKTFRKSRNFEIDKEFYSTDNKSLFEHSEKKWLTHIKEDYPNCISLKEMCEFLTNKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI17</accession>
    <name>A0ABV2AI17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">ATP-dependent DNA helicase II subunit 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">KU80</name>
        <name evidence="12" type="ORF">MHBO_001174</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000256">
        <property type="protein sequence ID" value="MES1919322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006164">
        <property type="entry name" value="DNA_bd_Ku70/Ku80"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016194">
        <property type="entry name" value="SPOC-like_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12604">
        <property type="entry name" value="KU AUTOANTIGEN DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12604:SF4">
        <property type="entry name" value="X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02735">
        <property type="entry name" value="Ku"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00559">
        <property type="entry name" value="Ku78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100939">
        <property type="entry name" value="SPOC domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="8" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 12" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ku" evidence="11">
        <location>
            <begin position="252"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="482" mass="55726" checksum="6395D3FFA8633DF4" modified="2025-10-08" version="1">MTNKIADVLVIDELSNNDDFGLLDKARNYIANYAMNKLLFYKKTDMFGIYGVSSSGELTDISPLKQQFDLEDLKKIKEIKLKTDLSKSQKTDILKNLIEEIQNVIKKRKYTIKIHFITNCKINENFGNSDINDTLSENKIFVEFILLSQKFNDFYNSIANKFISVSTFRDAIFKAKNERKRSIKHVPKYKGFLNIGNALKISVCCYSKTKVERAPPAKRRRADTKSAIKTISRYYGLFDEDNVIKNDSPDSPYFVKDKIKAFSFGKDIVPFTVFDEEGLESKTEKSFCLLGFVKRDRIDLLPLRMSTSDYVCAQPENERSVLLLAAFVSACRKTNSVAIVRLIKQNKAMPLYGYLSPGINGNERYFVWNELPFREDIKLVTKRDQKFESVTKEQLLKMEEFVDSCEIKSEVKIGFNPILQRLHEKIVGAAAKEMGDDFCKILSNDKIIANNFIFSEPKINCEELKECFSLEKREKSKYWFEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI79</accession>
    <name>A0ABV2AI79_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000836</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000163">
        <property type="protein sequence ID" value="MES1918952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="459" mass="53666" checksum="B4E169BA8D6BCC44" modified="2025-10-08" version="1">MVLALFGDLGENIILKNEMSQDRNLLNNHIKELTNCNCIDGTIFKQTFSRISAILNHFDDFALKDFYEQTVLNLPHQISSFQTEVSLKSKFAKSGKNDQNRENFIRTLVNLKIIDSFLCRYLKICDFLGKVGCNSHFNSLLTTMQTLLKTENNDIFKIAISIVERFFKMPKSKKYFLLIQKALNNIKTKTLSAMISNYPENRKCVETVWTLFGNENYLLSHKIKNLYKIVINALTNQNYGHKEDLLNFVLKFDVQVDIEKMSDAFTNFSPFLIFTFLKICSNHFDKIYKSENSSFGKMILRVHNFVMTQITQNDSENYKEKCICLLIISECLSKKYFDIVSVKTRFGDIIRLLKGLCKIDKLKPEDLVSILKTTKILLKNKNCEKIIKIVQKFVFFVVQNLGTANKFDLFFENEKIVLNLFDCLIKIDVENKNFQNLILFFEKLLKSFVFNKRRKMLQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI91</accession>
    <name>A0ABV2AI91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">6-cysteine protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001223</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000273">
        <property type="protein sequence ID" value="MES1919380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="501"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="424"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="427"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="439"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="450"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="529" mass="61154" checksum="E3757024530B3048" modified="2025-10-08" version="1">MITLYFAAIISYVNSNQFDICDNSNLIDKGFAFKPLNSNFEEQDFNEWKLDHFEIKTCFVPNQKYVIFCKNDDKLIKSRDENFFVAVTILCDEETGENIFQTFEANSLSCENKTSDVRTSCNSDKIDENIIVSKTQIGIIDNIGFLSSVAGLCKNIDRKVNIACYNYIFYYIGDNANNSINPNYYCNACFISESLQSLYAKLDLENIYYENFNFEYLKNKKIILPGIFEISCNNGYFIKDNMIFFKIDLKCDENHLTFVFPDDESTDISKISCNGSHENKSHICSFASITRFDYFKLPEKGYFEGKFKLVCPKNKEIFIEILCNEGSIVYQNDAVSYCQKHECLPEYPDYKFETIEENEKTFRMSCNDSNGKKYYVQFNEVDVLEYLTVFCEGEKLFLSKSNSKSDLEIKKQILKCVSEDYVNSQESNNSNDKNVPNDNTDEPNYDNDNIDGNYDETNNNNIGNNGNDAKDNVDNNVDINIDESNNSNKNGTKNLRKISPIFLLFPIISWTIFFSFIGLMVYLFNKSNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC2</accession>
    <name>A0ABV2AIC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001248</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000281">
        <property type="protein sequence ID" value="MES1919410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="168"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="218"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="26"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="78"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="188"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="222"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="235"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="315" mass="37024" checksum="53ACFF678D4C8D58" modified="2025-10-08" version="1">MTKGAKQRNFDLKKYESLTKKKNPFDSINRNSNKNGLRRNIGIISKMQHKNKTVKQFGRQNKNRYFNKTRRNRDENKQNVNYSNNNNSKFEKNPKTLMDKINKKIQDDESDENLVRMSDEKFSQIRNKLNFSGKPRIFKNDVSESFQNLLVSLSSESTATAIKKAQILTKDDSSSSSDLISNNDQDFPDDRENSKVDQDAETKFLDKMTNDEVRKLYEIDSSDPNDNSLDQNQKTGKKSKFASPRKKFATLTPSLSRFKKKPRIQKMARTKERNKLKSLRKKASEFRFEKRALEVKEETRRAERQKEIRKIIENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC4</accession>
    <name>A0ABV2AIC4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">BRCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000877</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000175">
        <property type="protein sequence ID" value="MES1918997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010613">
        <property type="entry name" value="PES"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12221">
        <property type="entry name" value="PESCADILLO - RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12221:SF6">
        <property type="entry name" value="PESCADILLO HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06732">
        <property type="entry name" value="Pescadillo_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="BRCT" evidence="5">
        <location>
            <begin position="266"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="410" mass="48049" checksum="3777A950962D37BC" modified="2025-10-08" version="1">MGHAQRKKKGKKRLNKHSLGLTKPLEYISRSRAIKKLQISMTDFRKLCILKGIYPQVPKNRKFSKTKIYYYKRDINCISREPVLAKYRDIKAYSKKKTKARSKFSTADLLSVKKSKPSINYDHLVKERYPTFGEALEDMDDPLTLICLFLSVPARAVKGFGPEKSEDLQRLYDEFLHLTAIKGWLRKSFISLKGFYFQVDIDGHSITWLKPHKFTQNLENKKIDFNSLVAFLEFYHTLLKFVVYKLYKDQKMDYPPKFEQNITLKSNNNLFHNFVFLLSKETPYDVLEYIIKALGGKIYIETNVFDKMDKIKPLLTHKISDRPLFSASKTKDNFENVQSQYVFDCLNFGKILPVGDYLPGNKCPDHVSPFENFENLQIDQDAPKLENEDLNESEKKERLLDRIAAQKRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF1</accession>
    <name>A0ABV2AIF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001274</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC34A transporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000290">
        <property type="protein sequence ID" value="MES1919440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003841">
        <property type="entry name" value="Na/Pi_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010:SF46">
        <property type="entry name" value="SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045650253" evidence="8">
        <location>
            <begin position="26"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="122"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="22791" checksum="E833F1020FFC448F" modified="2025-10-08" version="1" fragment="single">YFLVVFVVDFCLCLILLDQLKNTTAKNFTIKGANVGTTITAFLAAIGEGVQEGIQIAICHFLFNFFGILLIYPIPYFRSLPIVSAQALGYKISKNRLYGFLFISLTFFVIPGILLGLSFLKWGNVVGAVLLYSSLLFAYIWRQIRVRCPHAIPLWCPNFMKPNNREAEEAMEDLDFVAKFVGAEKLEDGLVVTKKEDFENNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH1</accession>
    <name>A0ABV2AIH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001283</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000292">
        <property type="protein sequence ID" value="MES1919453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14989" checksum="70898975615FDBE2" modified="2025-10-08" version="1">MSKFLNIVETNDHQMLLELIKSFVSNYLDDFNIPIIARTETNSKIDNFKKRLLDKNRNNILSTKNIIFHVQFFKVLETIFFNLSNFNSKNRRFLTQRGIYYELKKFFSSQNELNEILNGFYFRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR1</accession>
    <name>A0ABV2AIR1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tr-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000312">
        <property type="protein sequence ID" value="MES1919512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050055">
        <property type="entry name" value="EF-Tu_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43721">
        <property type="entry name" value="ELONGATION FACTOR TU-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43721:SF11">
        <property type="entry name" value="SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="1">
        <location>
            <begin position="9"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="281" mass="31635" checksum="5066588371050EEF" modified="2025-10-08" version="1">MTESPKKQITNVNIGLFGHVDSGKTSLSKLISTHKSTAAFDKSNQSQERKITLDLGFSSVIFLKERVQVTLVDCPGHSNYIKTIMGGAQIVDGAIIVIDIVEGIQRQTLECSALCKMLSKMAHKNGRPFFLFFFLNKVDLLANEEVLKAKMAKIEKALTKLFLRKNVRKNVLAIQSVFRNNKNKEMAEKEKISNFILEKIANFCENGHFLDRSGEKFDERQEKFLMAFDHCFGVKGKGTVLTGTILDGNVKIGDKLYFQSNPNAFLKVKSIQKFHQNVPVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY7</accession>
    <name>A0ABV2AIY7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WDHD1/CFT4 second beta-propeller domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001448</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000357">
        <property type="protein sequence ID" value="MES1919653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022100">
        <property type="entry name" value="WDHD1/CFT4_beta-prop_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19932">
        <property type="entry name" value="WD REPEAT AND HMG-BOX DNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19932:SF10">
        <property type="entry name" value="WD REPEAT AND HMG-BOX DNA-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12341">
        <property type="entry name" value="Mcl1_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WDHD1/CFT4 second beta-propeller" evidence="2">
        <location>
            <begin position="261"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="210"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="107"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="338" mass="38274" checksum="4D2F0C96A6A3DDC5" modified="2025-10-08" version="1" fragment="single">GRYAILPSYNELRLVESEDWTSETKISPEKQIGEILFSVWSPNDNFAASIGPESKITIWDLCLSKSVFSDKISSVTSIAWPSDDKLCLAKSDGTLSYFDVSQFNKNDGKSSNSTQVLSNEKEVPETQLSINDSDEQNRSRESNSEDDFELVDDLEKINFDSFETNSNQKKPISDFKSDSKNSEDDYFDRAGNEKIAFGSESEDIDAFIDNGNEETTKKPKKSSKRKSLAEQKSEKMAKTWNEHEKTDRKNIETFAFKSPQKAFQSSCTPFVGDRRYLVWNLAGSVTMIRGEDNCVVDIELSDVSLYKQDKIVDDHIFEFACLCFLFAIFSRKGDIFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ66</accession>
    <name>A0ABV2AJ66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Protein fam49b</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">FAM49B_1</name>
        <name evidence="6" type="ORF">MHBO_001506</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CYRI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000381">
        <property type="protein sequence ID" value="MES1919726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039789">
        <property type="entry name" value="CYRI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009828">
        <property type="entry name" value="CYRIA/CYRIB_Rac1-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12422">
        <property type="entry name" value="GH09096P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07159">
        <property type="entry name" value="CYRIA-B_Rac1-bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CYRIA/CYRIB Rac1 binding" evidence="5">
        <location>
            <begin position="19"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005778"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="316" mass="35858" checksum="B834C167CEEBEE17" modified="2025-10-08" version="1">MGKIISNLSYRNDYKKCELNFEEAKPSDDAKAIFDLLKEMFEKSGRLKQELENYQDCTKEVREAMENPDDPEVVSRCFAVINERVAVGKRLYDFSLLAQNALDRFIEIFEPILSSTDALKPLLVNEQALVYQVIHLLASILKVDEAKLKKPALQNDLAFYRRVLPKVGIETELCISRNDVNNIISFLAEHIPLTRSISNNLAETAKDKTAVAELLAEMANGSFKIVHAKKFPPESPENIVFLQAMVLTIIVYDSLRPDGAFTSGSSINLRFILRFLQNSPISDFKEAKALCNHVRYGCNPDNYRKAPESIHSMFDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF9</accession>
    <name>A0ABV2AJF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000406">
        <property type="protein sequence ID" value="MES1919805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6296" checksum="CBD038F65DEA28E2" modified="2025-10-08" version="1">MFQLPNSQSSLVLYVNVVDRLIRMKPDSVPKILAKAIFKLFEQIDFIDLECRLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN9</accession>
    <name>A0ABV2AJN9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000429">
        <property type="protein sequence ID" value="MES1919873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045610881" evidence="1">
        <location>
            <begin position="18"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10872" checksum="0D5A5CFD95BB1435" modified="2025-10-08" version="1">MLSLKLMAVFFAHNMLSENILLDNCVVKTSEFYQTMIVSMDNPEDALMYSIVLLEKKKIFALVLNGKLTFDPVTIRCGPIGKWDARLEFIESFYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ1</accession>
    <name>A0ABV2AJQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">60S ribosomal protein L26A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPL26A</name>
        <name evidence="6" type="ORF">MHBO_001653</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000440">
        <property type="protein sequence ID" value="MES1919908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06089">
        <property type="entry name" value="KOW_RPL26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005825">
        <property type="entry name" value="Ribosomal_uL24_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005756">
        <property type="entry name" value="Ribosomal_uL24_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041988">
        <property type="entry name" value="Ribosomal_uL24_KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01080">
        <property type="entry name" value="rplX_A_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11143">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00467">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16906">
        <property type="entry name" value="Ribosomal_L26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01108">
        <property type="entry name" value="RIBOSOMAL_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="KOW" evidence="5">
        <location>
            <begin position="48"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="8"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14199" checksum="3561FE21FE160D74" modified="2025-10-08" version="1" fragment="single">MKINPKVSSKRRKSRKAHFSSKSEKRRIIMSSALSKDLRKKYDARSLPIRSGDEVIIVRGSFKNREGKVTNVYRNKFRIHVEKVTRESSTKTINIGIHPSNVVITKLHLTDDRRSLLKRKGGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT8</accession>
    <name>A0ABV2AJT8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CDC55</name>
        <name evidence="6" type="ORF">MHBO_001698</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the phosphatase 2A regulatory subunit B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000459">
        <property type="protein sequence ID" value="MES1919956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000009">
        <property type="entry name" value="PP2A_PR55"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11871">
        <property type="entry name" value="PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037309">
        <property type="entry name" value="PP2A_PR55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00600">
        <property type="entry name" value="PP2APR55"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 4" id="KW-0853">WD repeat</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU331113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="475" mass="55063" checksum="A64B0F872231E0D7" modified="2025-10-08" version="1">MSDESETISLKQIFRHSEAKDIFTSVDIEEDGEFIATGDSSGKVWIYNWEADDSLKTDQSEDTSSSISIDNEESNEKTTKLIKRSKLRKNMTMDKNILEARQKMAEKIKLKQSPEINNNGDGTFDFYGQFQSHEPSFDYLKSLEIDEGICMVKWLPRQSYSLFLISTNDKMIKLWKIYERSLIKPEDYGFRNVETDYGKFIRLPNFKMSANVTAVSMRNQFKDAHAYHINSISINDDKETFLSADDLRINIWNLENSAETYNVVDIKPEKMESLKEVITTATFHPMQRPIFLYGTNEGSLKFNDLRMSSNFDVSLKESEKMFNDVTSAIADIKFLPCENEIITRNYLSLTNWDVRQERYPLRQISVMDKVQSNLITLYESDLIFDKFECAINSEGSRCVTGTYGSQFVSWDLEKNRDTIYKFSNISCDVKEEKTFPTDNLSVRPLNIAYRPNSDQFVTTQNQTLSIFETGKNDDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU5</accession>
    <name>A0ABV2AJU5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RGS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001693</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000457">
        <property type="protein sequence ID" value="MES1919951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845:SF192">
        <property type="entry name" value="DOUBLE HIT, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845">
        <property type="entry name" value="REGULATOR OF G PROTEIN SIGNALING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00615">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00315">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RGS" evidence="1">
        <location>
            <begin position="4"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="14274" checksum="EBFD40AE9E25B5AF" modified="2025-10-08" version="1">MLKSFDETINSIKKRKSFSNFLEKEHSRENLQFYDTVLQFKKIKNEKKLEIWGNFIFCMYVRSGSYYQLNLPEKIVTRLVKKVKEKKFNIGMFDDAFKEVKKMLIFGSFMRYSRIIGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ3</accession>
    <name>A0ABV2AJZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001376</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000328">
        <property type="protein sequence ID" value="MES1919567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18501" checksum="A9F6655D2405CCB1" modified="2025-10-08" version="1">MRTQSIDSENKRSSSLESPEIIPGEKIAETAKFLNQNSLTKITEKSIRKTNFCQQKDKSFCRRMVKPDERENTSNDNKKTDHKNNTENLLSSKQKASNTKKSDKNPLITGNFETRRNILSNFRERKNKINYLIKTVSKIFAKRILEIFQKYLQTKIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK00</accession>
    <name>A0ABV2AK00_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Zinc-finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001730</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000472">
        <property type="protein sequence ID" value="MES1919995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018866">
        <property type="entry name" value="Znf-4CXXC_R1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10497">
        <property type="entry name" value="zf-4CXXC_R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Zinc-finger" evidence="5">
        <location>
            <begin position="96"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF10497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="19999" checksum="0914A777B8D01BEC" modified="2025-10-08" version="1">MAAIKPIEMAEKFNLDPTQIKILKEKVCCARLKLENDSKKEFNRKITKICINAKKIISLRRSVKRVVNWIDHKTNESNFINSKKTENNYKNRLLSNNNSCHQCKKNKPNSSLAFCTKINSNSKYCNKKFCEKCLWKKHKILFSLIDKKDWLCVFCSGNCNCAKCLREKLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK40</accession>
    <name>A0ABV2AK40_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Histone acetyltransferase type B catalytic subunit</fullName>
            <ecNumber evidence="3">2.3.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">HAT1</name>
        <name evidence="11" type="ORF">MHBO_001596</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-lysyl-[protein] + acetyl-CoA = N(6)-acetyl-L-lysyl-[protein] + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:45948"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:10731"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:61930"/>
            <dbReference type="EC" id="2.3.1.48"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HAT1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.48" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000416">
        <property type="protein sequence ID" value="MES1919839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061733">
        <property type="term" value="F:protein-lysine-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04301">
        <property type="entry name" value="NAT_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.360.10">
        <property type="entry name" value="Histone acetyl transferase 1 (HAT1), N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048776">
        <property type="entry name" value="HAT1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019467">
        <property type="entry name" value="Hat1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037113">
        <property type="entry name" value="Hat1_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017380">
        <property type="entry name" value="Hist_AcTrfase_B-typ_cat-su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013523">
        <property type="entry name" value="Hist_AcTrfase_HAT1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12046">
        <property type="entry name" value="HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21183">
        <property type="entry name" value="HAT1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10394">
        <property type="entry name" value="Hat1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histone acetyl transferase HAT1 N-terminal" evidence="9">
        <location>
            <begin position="35"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="domain" description="Histone acetyltransferase type B catalytic subunit C-terminal" evidence="10">
        <location>
            <begin position="313"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF10394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF21183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="403" mass="47602" checksum="E3838CB2D35EFC20" modified="2025-10-08" version="1">MADPVNFKKPKLDHSNYYLSNLKEKSEQKNHREYFCHANTAIWLKLIRTPSDFDNDDIVFHPKFTHQLFDKEIIKGFKNLRVNIYFSQASLATFFQITYEDKLDDSFSADELEKKITKNIVGGFYKDKAEFLKALSRENNFKPIGKVIERHKRLSELETDPEHPCFSSYLPAFYGADTEISYKITLSTFKTPGFKSFHDRIQFFLLLFIDASSYIDSSDSIWNVLCLYERRQNRRGDGSAGPAYTFIGYCTLYSFFSYPDSSKLRISQILILPPFQRSGHGGHLLEVIGELCRKGDYSELNIEDPSDGFQFLRDLMDVSNCHRRNYFSFLSEENFREDLDEKLAARIKRELKITDVQIRRCFEILKLKFLDIKNEQQYKLFRLFVKKRIYKIFWEEILSSLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK63</accession>
    <name>A0ABV2AK63_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Timeless N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000495">
        <property type="protein sequence ID" value="MES1920055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="562"/>
            <end position="622"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="570"/>
            <end position="584"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="587"/>
            <end position="613"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="622" mass="72654" checksum="F5F26054DAEC1B65" modified="2025-10-08" version="1">MESFIAEDWLEFMELLQKMVENETRHFLPNLLTPGLNMYPGENSIAYLCTEYISECNSFLAKLGPSEYTLYPTCILFQFYEHLRKLLKSEKSRKFLTQTTIQKISMLFLDYRGIFRRKSKDITEEELALLQRMLLPIKNKRKTLHLKQDALKSTKVSREFISEANRIQNHIFKILKDFILKVSDIELVLTILSGKMYSLFKRLIFIFFQKQQLKKGVVSTFINLDLTKLEVDVEKSLARRSQIFSVLNLKKPTLELEAQESEKPFKSKKALSSVTKRLCVYYDNTFELLEAMRKFESRLQNFVKRSLGKSVSAKWEKWDMKPLFEQCDLLLEIIALRIALYDSKDFFQNLFKTKNLKNAETSEKLSNYTITLAQIREFTLKENCHFIIEATRSMVYKLLEWMLLDSDRTFTLFHGEELSEAFDDLNLVFNFFLPEDRRSEVPESVTSLLKLMGLGDSDLLNVYREARDKGVIKNEYLGRKEKEVSSSQKVMEKQELTLTSFFEVLSADEEPEEKTKKGKDNSKMKLNKSEKTKILEKLLSVISRRRTELCRKFAVDNKKKVPVEIKSDQESDSSDYSASDEDYNDSGNDKANEDSNDGVEKEKTAQKSPKTSDYDEDFDSTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK69</accession>
    <name>A0ABV2AK69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">U3 small nucleolar RNA-associated protein 7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">utp7</name>
        <name evidence="7" type="ORF">MHBO_001792</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000501">
        <property type="protein sequence ID" value="MES1920072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012952">
        <property type="entry name" value="BING4_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040315">
        <property type="entry name" value="WDR46/Utp7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14085:SF3">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14085">
        <property type="entry name" value="WD-REPEAT PROTEIN BING4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08149">
        <property type="entry name" value="BING4CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01033">
        <property type="entry name" value="BING4CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="170"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="BING4 C-terminal" evidence="6">
        <location>
            <begin position="255"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="339" mass="38343" checksum="AE4810D1A2EEA4D5" modified="2025-10-08" version="1">MEKDFRLDLKQGPYFHSYSRNGRDLLLGGQRGHVALFDWHKPRIKTELQLEERINDVCTLFDDSLFAVAQKKHLYMYDNNGIEIHCIRKHKFVHKLTYLPYHFLLCSIGKFGILKYIDISTGEDVSALNTKSGPCGVMQQNPWNAVIHLGHLNGSVTLWSPKTLKPLAKMLCHKAPVTSVNIDMLGRYLVTSGADNKIKVWDLRKFGLLHGHHKKVSKPNCVALSQKNMLAVAEGPRVSVYENIVVKKLDNQVKRALFPGHRITSVSFCPFEDALGLSKSEGFSTLMVPRSGEADFDSLEINPFETKGEKKNRLVRSLLDKVQPELITLNPNDIGKILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH5</accession>
    <name>A0ABV2AKH5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AMP-dependent synthetase/ligase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001843</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000523">
        <property type="protein sequence ID" value="MES1920127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43201">
        <property type="entry name" value="ACYL-COA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43201:SF8">
        <property type="entry name" value="ACYL-COA SYNTHETASE FAMILY MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="2">
        <location>
            <begin position="6"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="446" mass="51243" checksum="3B782FE0F2917BFB" modified="2025-10-08" version="1">MCSNPLKFAIAVYSIWNFTNGIVLPISPLLAKLDIENKIKLFDVTKIATDINFEKQKFPSHLNFINIHAPLTNNKNNNKTNPDKIRLQRNRSDPALIIPTSGTTGTQKGVVYNLTKLQNQSLSMAECWSLSENDHFLNMLPLNHIHGFVNNFYLPLFYLNAKITFTEKFNPKMFIETILEFGTINVFMGVPTMYSQIVSYYKKLEKDKKKELSERLSKFKIFLCGSAPLSEKTENEWSSISRKPLVQRFGMSECGMVLSNDPKNVAKKSVGVQMPKIRAKLDQNGIRCVGKPNVGELLVKSENIFEEYYKNGEKTKMSFKDGWFKTGDIFKFDDKRKVFLYLGRKNVDFVQINGFKVSLMEVEKLIVSSNLAEEALIAKRSKNGVDYLECFLVKNSESKNFEEDLIKLKKWLKKNVSGHMIPRKINFVKEIKKNALGKIARSFYNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP5</accession>
    <name>A0ABV2AKP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">C-5 sterol desaturase</fullName>
            <ecNumber evidence="7">1.14.19.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ERG3</name>
        <name evidence="7" type="ORF">MHBO_001944</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.14.19.20" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000571">
        <property type="protein sequence ID" value="MES1920253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050046">
        <property type="term" value="F:delta7-sterol 5(6)-desaturase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006694">
        <property type="entry name" value="Fatty_acid_hydroxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050307">
        <property type="entry name" value="Sterol_Desaturase_Related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11863">
        <property type="entry name" value="STEROL DESATURASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04116">
        <property type="entry name" value="FA_hydroxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid hydroxylase" evidence="6">
        <location>
            <begin position="2"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13863" checksum="ACB6066223A1EC08" modified="2025-10-08" version="1">MSPFASHAFHPVDGWLQVLNLTSKSLPYHIFVYLFPLHKRLYVSLFVFVNCWTISIHDMIYFNRLTLINGAANHSLHHAKFNYNYGQYFIVFDWLFGTFKAPPKEEMDGTYLKRKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKU5</accession>
    <name>A0ABV2AKU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001748</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000479">
        <property type="protein sequence ID" value="MES1920018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11990" checksum="A0FB1A92C5CBAFCD" modified="2025-10-08" version="1">MDKNEGKDDEIGKIYQNLDHFCRKNPNFVKKESNFKQTKKIYNLIKFDKEINYMNPKVPKIVAKSCELLVIDIVIKTLALTKSQKRVVLTVFIFKPKRTKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL51</accession>
    <name>A0ABV2AL51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Brix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001747</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000479">
        <property type="protein sequence ID" value="MES1920017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10480">
        <property type="entry name" value="Probable brix-domain ribosomal biogenesis protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007109">
        <property type="entry name" value="Brix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044281">
        <property type="entry name" value="IMP4/RPF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22734">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22734:SF2">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04427">
        <property type="entry name" value="Brix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00879">
        <property type="entry name" value="Brix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50833">
        <property type="entry name" value="BRIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Brix" evidence="1">
        <location>
            <begin position="83"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="291" mass="33718" checksum="8AB63E2DED3FFFFC" modified="2025-10-08" version="1">MDRRLVRLRQEYLHRKNLEGKEKTSYERKLALREALRQGKSIPNELKNDGLEVFDQVDAEDEWTSKLRDPKMDEYSASIKREPKILITTSRKPSSRLKKFAKEMKLVFPESVRVNRGGMVLKDLVTSAITNDFTDIVLFHEHRGNPDTMIISHLPHGPTASFSMKNCVLRHDVDKKEIGQMSTAYPRLIFDNFSNSIGERVTNILRFLFPTPKITAKRVITFANRGDYISFRNHGFKKRPPSDVELSELGPRFELRLYQIALGGLETRDPTIEWVLRPYMNTAKKRKVLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA5</accession>
    <name>A0ABV2ALA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002136</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000688">
        <property type="protein sequence ID" value="MES1920471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="137"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="24376" checksum="FB57F0635075BCCA" modified="2025-10-08" version="1" fragment="single">MENAKHIAQSNYPSTLIVVQQALHGLSVASKNKRDFHISRIYLEKELQTLNLIQLNIREGKMVLNQNITLIEKYFDCYRAMENIHSVLGNAAESAEFAAKASLAQEGKNFDVDTYKKKACFVENLLTATEKNFVQTGPLDVSSEDDRRSESSQSDSNEVETDLEDKASRLKEGEIFVPCESLLKWRDELDSLVDLILKDGGAQELAFYFRAEGFDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI9</accession>
    <name>A0ABV2ALI9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">diphosphoinositol-polyphosphate diphosphatase</fullName>
            <ecNumber evidence="1">3.6.1.52</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002211</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>1,5-bis(diphospho)-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + phosphate + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:79699"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:74946"/>
            <dbReference type="ChEBI" id="CHEBI:77983"/>
            <dbReference type="EC" id="3.6.1.52"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="5">
            <dbReference type="Rhea" id="RHEA:79700"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:22384"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58130"/>
            <dbReference type="ChEBI" id="CHEBI:58628"/>
            <dbReference type="EC" id="3.6.1.52"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="4">
            <dbReference type="Rhea" id="RHEA:22385"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein-tyrosine phosphatase family. Atypical dual-specificity phosphatase Siw14-like subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.52" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000731">
        <property type="protein sequence ID" value="MES1920550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.10">
        <property type="entry name" value="Protein tyrosine phosphatase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004861">
        <property type="entry name" value="Siw14-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016130">
        <property type="entry name" value="Tyr_Pase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000387">
        <property type="entry name" value="Tyr_Pase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020422">
        <property type="entry name" value="TYR_PHOSPHATASE_DUAL_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31126:SF48">
        <property type="entry name" value="INOSITOL PHOSPHATASE SIW14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31126">
        <property type="entry name" value="TYROSINE-PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03162">
        <property type="entry name" value="Y_phosphatase2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52799">
        <property type="entry name" value="(Phosphotyrosine protein) phosphatases II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00383">
        <property type="entry name" value="TYR_PHOSPHATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50056">
        <property type="entry name" value="TYR_PHOSPHATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50054">
        <property type="entry name" value="TYR_PHOSPHATASE_DUAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="Tyrosine-protein phosphatase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Tyrosine specific protein phosphatases" evidence="8">
        <location>
            <begin position="64"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00044949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00047342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="22100" checksum="D62D5633A8FB5245" modified="2025-10-08" version="1" fragment="single">SGFIRPENLPFIRSLNLKTVICLSKDPYRPETFSFFEKNGIRVINKGMESTKESFDEMPQKAFKEVLEIVKDEEKRPLLIHCGKGKHRTGCLIGIYRCSSRWSLTSIFEEYNRYAGSKARPLDLQFIEQFHVKYNHGYFYFCLFTSFFAINPFLHLSFFGHFRRKTKLFSFNVSFPSNRFHKKKDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK0</accession>
    <name>A0ABV2ALK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sodium/potassium-transporting ATPase subunit alpha-1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ATP1A1</name>
        <name evidence="6" type="ORF">MHBO_002193</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000722">
        <property type="protein sequence ID" value="MES1920530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050510">
        <property type="entry name" value="Cation_transp_ATPase_P-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43294:SF21">
        <property type="entry name" value="CATION TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43294">
        <property type="entry name" value="SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08282">
        <property type="entry name" value="Hydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="443" mass="49376" checksum="D7DEB1C1C0261A94" modified="2025-10-08" version="1">MTVSHLFYDGRARTIDTHDQRKGDFDKNEEGFTRFMRAAILCNNATYNKENMIIGDASESGLLKFGNPNLNDTIAEFRRKRQKLHGIPFNSKNKWQLSIHRTSEDSSKGPVIVMKGAPERVLQYCDRILLDEQVKPLRQEDIDSIMHGLNSFATQGERVLGFCELELDGEAFPEDYKFQGDSPDEANFPFRSEKNQSEGFVFLGLSAMIDPPRPSVPQSVLKCQSAGISVFMVTGDHPTTARAIASKVNIIAPKDSVFDLSKIEKPTLEDIESSDSTACVVTGSHITLFTNDVSADSKVRFWNGILSHKHIVFSRTSPQQKLLIVESCQKRNGIVAVTGDGVNDSPALKKADIGIAMGVAGTDVAKEAANMILMDDNFSSIVNGVEEGRVLFDNLKKVCYQNLVHRLHSLLEHPRDFPRHLQAFDRNPVAHPNDPHSDHRFGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN3</accession>
    <name>A0ABV2ALN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000723">
        <property type="protein sequence ID" value="MES1920532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="12976" checksum="0326C3DC52C3A7F8" modified="2025-10-08" version="1">MVDFMLSQKKADVLFETNVSIKSIINGEEKEETEKKLILTKSNIKFLSNDNATNTSVNLSDIVFISLSNKDDLQKDGEEICLKLIDKELVIKPSKAIPSLANYLYENIMEMMRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV3</accession>
    <name>A0ABV2ALV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NADP-dependent oxidoreductase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002302</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000786">
        <property type="protein sequence ID" value="MES1920651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="entry name" value="NADP-dependent oxidoreductase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NAD(P)_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42686">
        <property type="entry name" value="GH17980P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42686:SF1">
        <property type="entry name" value="GH17980P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="NAD(P)-linked oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADP-dependent oxidoreductase" evidence="1">
        <location>
            <begin position="15"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="35361" checksum="DD22544504A58FC6" modified="2025-10-08" version="1">MRYKILGRTGLKVSELSFGCSGFGDVYGNVSLETSNDLIAKAVENGINYFDTSPYYGAGRSEEVLGTIFPKFEREKLIISSKCGRSGKLKNDNTIESIFNFSAESLTDSIYNSLNVLNLDYLDIAFLHDIEFEKSKSKICEESIPALQKLKEKGLIRNIGISGFPIEILNDYLVNPSLEIDVVLTYGHYSLQSNLLNNYINEWKDRNVGIICASPFSMGLLTNKKPPKWHPASEKLKKVSEEAHRFCVRNDQNISKTALTKCLKNENIDTVLTGMYTMKELEDAIDVVGNPICPKFVEKVESVFKRAGVYNKMW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM43</accession>
    <name>A0ABV2AM43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002359</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <reference evidence="1" key="2">
        <citation type="submission" date="2024-03" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Hiltunen-Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Burki F."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000821">
        <property type="protein sequence ID" value="MES1920718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="JBDODL010000821">
        <property type="protein sequence ID" value="MES1920719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6286" checksum="C8620C0589B135D8" modified="2025-10-08" version="1">MDLGWSKPDLPAMTLHVWSSPPSSDVPVTKELWSEWARRTLTSEMKPSPREAFCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM77</accession>
    <name>A0ABV2AM77_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">14-3-3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002402</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 14-3-3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000849">
        <property type="protein sequence ID" value="MES1920763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08774">
        <property type="entry name" value="14-3-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.190.20">
        <property type="entry name" value="14-3-3 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000308">
        <property type="entry name" value="14-3-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036815">
        <property type="entry name" value="14-3-3_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023410">
        <property type="entry name" value="14-3-3_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18860">
        <property type="entry name" value="14-3-3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00244">
        <property type="entry name" value="14-3-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00305">
        <property type="entry name" value="1433ZETA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00101">
        <property type="entry name" value="14_3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48445">
        <property type="entry name" value="14-3-3 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="14-3-3" evidence="2">
        <location>
            <begin position="15"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20307" checksum="D1FB3032190FC623" modified="2025-10-08" version="1" fragment="single">MNSEFDIKSIKSEDRNHLLQLARLAENSERFEDMCAIMKRVISLAPNINMDERNLLSIAYKNAVGSRRTSWRAISSELEAAPEGAVRADMEKYKAVVEKELHSKCHEVLEVIEKNILPDFDKENAEGHIYFLKMAADYYRYLAETGQDEGKKTVEYYKKAYEIAEKSLVKTHPTKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD5</accession>
    <name>A0ABV2AMD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000868">
        <property type="protein sequence ID" value="MES1920795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="19526" checksum="833DB8F197F50D67" modified="2025-10-08" version="1">MSETALELDKDKTVLKNYNLSKMCKLNLSDWRKLQNNVIEGTVLRLSKTAQNLFNSADTISISDFFYNFVHSFVSQNVNCHPIQFFSLTFAKNKWPTEIQFVLSQILNAVWIECRNSDQKNSKTIELRFLALLSGLLSTQLISSDVFEKTLSVELIGKLGILDTAKHLNFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMF9</accession>
    <name>A0ABV2AMF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">WD repeat-containing protein 44</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">WDR44</name>
        <name evidence="3" type="ORF">MHBO_002338</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000810">
        <property type="protein sequence ID" value="MES1920694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040324">
        <property type="entry name" value="WDR44/Dgr2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14221">
        <property type="entry name" value="WD REPEAT DOMAIN 44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14221:SF0">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17076" checksum="554D085A49907E9A" modified="2025-10-08" version="1" fragment="single">GKEVTKIEFSKNSKKILVSTNDDRIRLFETGKFELIKKLKGHRSELFVGGSFSNEEKIIISGSKNGKIYLWGQQKSEKAYESIIEQDQVLTNAIFAPKESVNFAQEESDKINNHFEMVFGEFKPRDKINLIIVATNSKGFVKIFETKYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AML5</accession>
    <name>A0ABV2AML5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA polymerase epsilon catalytic subunit</fullName>
            <ecNumber evidence="6">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002502</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">DNA polymerase II participates in chromosomal DNA replication.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DNA polymerase type-B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000930">
        <property type="protein sequence ID" value="MES1920885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029703">
        <property type="entry name" value="POL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054475">
        <property type="entry name" value="Znf-DPOE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10670">
        <property type="entry name" value="DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10670:SF0">
        <property type="entry name" value="DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22912">
        <property type="entry name" value="zf-DPOE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23250">
        <property type="entry name" value="zf_DPOE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 6" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 6" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DNA polymerase-epsilon zinc finger" evidence="7">
        <location>
            <begin position="111"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF22912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20206" checksum="21BA53C790086CE9" modified="2025-10-08" version="1" fragment="single">ILQMVNYICKILSLDKSISDNVLTLKRSLLKLLSIPLFSPDAIFSDPGQSFVLQDIVCSYCADCTQIDLCKTPTALSREWLCVVCSHDIDLSAIENAVNGNFWDFVFAFITQDLVCKRCKRPKNLYLDNVCKCSGQFELKVSKREFEEKRDLFSKIANFYNFELLKESIEQSNFVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMN2</accession>
    <name>A0ABV2AMN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MSH2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">msh2_1</name>
        <name evidence="2" type="ORF">MHBO_002529</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000956">
        <property type="protein sequence ID" value="MES1920920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361:SF34">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05192">
        <property type="entry name" value="MutS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="DNA repair protein MutS, domain III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair protein MutS core" evidence="1">
        <location>
            <begin position="25"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17340" checksum="047BE2399CB0E4D3" modified="2025-10-08" version="1" fragment="single">MKKGAIEAMNLFSFGHKNSKFVLKQKSPKSIFELLNKTKTANGAKLLKRFLLQPLFDKSKIEKRLQIVQFLLENGKERIKIQNVLKKVPNIDNLRKKLIIGTCNVQDLVALYDFSKTTIPEMASVLNFKENLSFVEKSAISSLKMDVQSPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMP7</accession>
    <name>A0ABV2AMP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">AAA ATPase midasin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MDN1_2</name>
        <name evidence="4" type="ORF">MHBO_002370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000828">
        <property type="protein sequence ID" value="MES1920729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040848">
        <property type="entry name" value="AAA_lid_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041190">
        <property type="entry name" value="Midasin_AAA_lid_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103:SF2">
        <property type="entry name" value="MIDASIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103">
        <property type="entry name" value="MIDASIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17865">
        <property type="entry name" value="AAA_lid_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17867">
        <property type="entry name" value="AAA_lid_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="3">
        <location>
            <begin position="268"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="644"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="644" mass="74217" checksum="616A7102097A640F" modified="2025-10-08" version="1" fragment="single">MYVCGAKSGIFEFKNGILSDSAINGNVVVFENIDKAPFEVIATLIPFVKYNEFLLNGAEKKIGAEFKILATISNSSFLQNDIKSKKQKLISDLFHLIHINALTNSEIKEIGLSRYPYISRFEIFDLLFSFFCALSGSQKQKNLQNSGENFFDQISNFGSAKISLNDFFKCCKRVNKILENFSGKSLISSIKESILRNITDCFISKIPDKKLKFAIFGHFGQKLNLSSSRIDHIFNFDEKIFVDRSPKNFVMTDHCQNLLQKLARCVNMSEPVLLIGETGIGKTFSIQILAEHFGKNLKIFNFHQQTESNDLIGSFKPTNSEQKFLKIKGKFDKLLQSAKIKNQKIGENGSTELSESNFKQKFLRFFKMAQNLFKNDRISAKIWQKWLDLAKNVKNLNFSKFGFAEGILLQSLKNGDWVLLDEINLASRPVLERIESLIKSIDRKKFLLLEKGEKEQIRIHKDFRLFASCNPSDDFGKKELPESLKSRFSQIYVNNDFARNDITKIVQHFAKFENSAKNKNLTKSLVENLTSFYMNIGEKLKLTDRNGENIFFSIRTFVRALKNGKEIVDKYPLKRAIYEGFSAHFLTPLNYKYFKILDYRLKKAVFGDDLTKFDDLENNMAKFEEKTDNLLKAKNCLDKDRFVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT2</accession>
    <name>A0ABV2AMT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002553</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000975">
        <property type="protein sequence ID" value="MES1920952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="37770" checksum="3C59286D45ED8FF6" modified="2025-10-08" version="1">MQNEKLSQNDASFLLRTISSMWKDQVPIKDAWNCVKDISKKIANSRDAKNPLNKSADDILESKQISLQKPNYQVLDKPSPEKPKITDNRLSPEKSETVLQNGDFSEYSISQEEYYDESDENDINGRYDFSISMDRDQNSDSSNDIRKVKILKIRLLKILTIIEMRYFFYNLKDDSEESEGDSPGLNLAEHDENKPTINVSAFRRILRNNLYDVNRDDRNQDEILEALKDENKIGSKFDSKMRKIFDTPKNYESMSNDNEPVGTTEETECRRCTYSFPLTDKNCPMCGAAKNYEEPELWRCARCNSENGFKGKNKLFCEFCYSKET</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANF0</accession>
    <name>A0ABV2ANF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002739</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001123">
        <property type="protein sequence ID" value="MES1921170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="11376" checksum="4D1FF8736A4AFF14" modified="2025-10-08" version="1">MVQQKESSFLQDVFTKLQNAKSNDYSIKTRAENLETLQDAFRSNPFRHLLEIYYEKIKKELSILIDDPFCDFSKIRFCDFYKFFRKNLTKIAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP80</accession>
    <name>A0ABV2AP80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002718</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001106">
        <property type="protein sequence ID" value="MES1921142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017868">
        <property type="entry name" value="Filamin/ABP280_repeat-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001298">
        <property type="entry name" value="Filamin/ABP280_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00630">
        <property type="entry name" value="Filamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00557">
        <property type="entry name" value="IG_FLMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50194">
        <property type="entry name" value="FILAMIN_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="Filamin" evidence="1">
        <location>
            <begin position="88"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="repeat" description="Filamin" evidence="1">
        <location>
            <begin position="138"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="423"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="429"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="440"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="465"/>
            <end position="521"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="569" mass="65856" checksum="1E87CAB6D97458FD" modified="2025-10-08" version="1">MFGGKVKENLEIFIQIQYPLNKDIHSMKVDLDAERLPEKLSSKNKFNRPKSRYSVPKLSRNNETSKILDDGNEKFSPRKLNLNENKFIDYSVKRLGNDLFRVRYIAEVPGRYKLNIKINNELVDKSPFNVVVVPGDIVKVYGKGVEGDHIDFAKLEEEKYKHEFTIDSGLKMGGFSDEIDIKILSPAKRGIDHTLRDVGNGKYKVCYQSDEQGEHLVGIRMWGFEVLDVQKPIFSNKISSPLEIANGVLSLKLNFKDVSGEPKITGGDKTSAFMTFKNSTKMQKIETIDHKNGYYSANVKFPEKLDSVVKGKINFIVNDDSSLNPFYFCLSNNPFLHFDSDEKFENDPNPENVKMAENDQNPENVKMTENDIMAENYQNPENVKMTENDIMAENDQNPENRKMAENYQNPENHKMAENDIMAENDQNPENDKIAKRDKNIEEDEDFETENDSIEECENSEEDFARDEIPLKQKTDFIDEKSEQKETKNNIDSDISEVKSEQRENSDVENIKPKNEERRLTEEEVVITEQTESANAVHLDRKKSFRLLSKSNDDEPKKDKERTRKLFDFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC1</accession>
    <name>A0ABV2APC1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mog1p/PsbP-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002856</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MOG1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001236">
        <property type="protein sequence ID" value="MES1921314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1000.10">
        <property type="entry name" value="Mog1/PsbP, alpha/beta/alpha sandwich"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007681">
        <property type="entry name" value="Mog1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016123">
        <property type="entry name" value="Mog1/PsbP_a/b/a-sand"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15837">
        <property type="entry name" value="RAN GUANINE NUCLEOTIDE RELEASE FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15837:SF0">
        <property type="entry name" value="RAN GUANINE NUCLEOTIDE RELEASE FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04603">
        <property type="entry name" value="Mog1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55724">
        <property type="entry name" value="Mog1p/PsbP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="167" mass="19396" checksum="5735A70D3D4C9321" modified="2025-10-08" version="1">MFIFGGYAECAIPPNFSDLSKFRDVPDNQEIFHNTETDEAIIIEFLEYQKIDDLESAQFHFEEITKENRSDYFRILDISNHNEEQISPFLRQHSNFVSSCSGEQKMLRNGRVCEVFIKLFVVRVKKVATDIVISVNGPISEKESCADVLNDVVSEFRVRDWDLFKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APD8</accession>
    <name>A0ABV2APD8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002768</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001152">
        <property type="protein sequence ID" value="MES1921202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07032">
        <property type="entry name" value="RNAP_I_II_AC40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.120.12">
        <property type="entry name" value="DNA-directed RNA polymerase, insert domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.10">
        <property type="entry name" value="RNA polymerase, RBP11-like subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00320">
        <property type="entry name" value="RNApol_arch_Rpo3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011262">
        <property type="entry name" value="DNA-dir_RNA_pol_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011263">
        <property type="entry name" value="DNA-dir_RNA_pol_RpoA/D/Rpb3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036603">
        <property type="entry name" value="RBP11-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022842">
        <property type="entry name" value="RNAP_Rpo3/Rpb3/RPAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033901">
        <property type="entry name" value="RNAPI/III_AC40"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036643">
        <property type="entry name" value="RNApol_insert_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050518">
        <property type="entry name" value="Rpo3/RPB3_RNA_Pol_subunit"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001988">
        <property type="entry name" value="PRK00783.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11800">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11800:SF13">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01000">
        <property type="entry name" value="RNA_pol_A_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01193">
        <property type="entry name" value="RNA_pol_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00662">
        <property type="entry name" value="RPOLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56553">
        <property type="entry name" value="Insert subdomain of RNA polymerase alpha subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55257">
        <property type="entry name" value="RBP11-like subunits of RNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="DNA-directed RNA polymerase RpoA/D/Rpb3-type" evidence="4">
        <location>
            <begin position="46"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="330" mass="37203" checksum="CF533328EEDFD50D" modified="2025-10-08" version="1">MATKVKIELKNSHLTKTQFPAKDDGQNWMDKIQIKFRPNLSLDENTLEFDLRNADPAIAILLRRTIMNDTKAAAIEKVGIYYNDSVISDEILSHRLGLVPIKAETSKLVPMKRGDEMDSENTLVFKLDVTCSLKKGVAVEDLDILAEGDKFEKNVVFSGDLEWVPQKEQLDKFGENGVGCLFKDIVLAKLRPGQSIKLEAFCQLGTAKDHAKFSNVSTAHYRMKTKVVFKNPITGKRAEKIAKCCKNIFGIKNSELVLLNEDECSLCRNCLSEGGDDISMQCRTNDFLFEIESLGLKSPEKLIFESLETIEEKCHNFLTNLEQLNKPFSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ64</accession>
    <name>A0ABV2AQ64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Heat shock 70 kDa protein 4L</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">HSPA4L</name>
        <name evidence="2" type="ORF">MHBO_003127</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001530">
        <property type="protein sequence ID" value="MES1921596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="135"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="165"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="180"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="21564" checksum="90E033C4D3CBB841" modified="2025-10-08" version="1" fragment="single">TENYIYSSDSDDPKNIPKLENLLQIASKQKKSVLSLITENETFSPTAANLTDLINKNRALLNEALQKSEKYDHLSKEELESVSENLKDCEKWLETATAIRSTCPLPEECSVKVGDINEKTRELKIACDLVFNRKKPDVKKDDQNGDDNNNGENGDGKDIGENGDDNNNGENGDDNNNGENGDDKDNDQEKEEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE1</accession>
    <name>A0ABV2AQE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001728">
        <property type="protein sequence ID" value="MES1921759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.60">
        <property type="entry name" value="Vacuolar protein sorting-associated protein Ist1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042277">
        <property type="entry name" value="IST1-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="72"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="86"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="99"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="116"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15630" checksum="2A5EAAB3953A908D" modified="2025-10-08" version="1">MKLLTNRFGEEFEANVITNEAYVEKRVKDWLSVNPPRRKRVISRLKSISEEYDLDIDLTKFEKEEEFEKEMEKLIDQNGADLSENSYDKNQKEFKRDLQNLSSTSDNKNGSANESSDSKKEFGNLEDRLNKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM3</accession>
    <name>A0ABV2AQM3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002012">
        <property type="protein sequence ID" value="MES1921973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="18706" checksum="4CE83C3D827AF9F9" modified="2025-10-08" version="1">MILFSIINFVLTTGATLILLVLIFNPNWLVAVANNNSFHLGIRGYSTSTAKFDLSGISSYGKNSPFCIGACPKFEEGNKILLALMSIMIFALVALAIIKGLLLCFSKILKYLFIILYACLAISSVVLPILYDLYFKKSINKSFNVSNSFNLYLSLALVPIFIVLAVLAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM9</accession>
    <name>A0ABV2AQM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003307</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001751">
        <property type="protein sequence ID" value="MES1921776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="25424" checksum="8B7E0A20EE420D53" modified="2025-10-08" version="1" fragment="single">KLLFNSLTKILEEMLTSMYKFEYPVSQRSQKLTIKILQNIENYIPGELKLAIMIAFKLQSLITSGEKRLYISNITNDSRLNWLLLDEDKKELLKRSRDVNSILERSVLHLSKNSENLNGNLIHFKSIIKNNKIQTEFCNEVNYICLIIFHQREEAIKFLNLDICKEYIFTFAKNEICVLFNSSVCIKNRTCHLRHICAWCGKKEHNLYHCLKYNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ0</accession>
    <name>A0ABV2AQQ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003272</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001704">
        <property type="protein sequence ID" value="MES1921743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18410" checksum="9CF76A7A4D8ED5DF" modified="2025-10-08" version="1">METNQNSNSKMDKENKTINEEKKIGRNYYIADLSASSEDDENEGTTAENFETRSRNYIESLQQEALSAPNKELREHIRQTQLREQNRNERLAQGAMVFSGDASLENGLKKSHFDQSGVNIRYKHDGRVVDEKEDLKTEKLLPSLSDPKLWKVGCPVFIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU4</accession>
    <name>A0ABV2AQU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PDHA1_2</name>
        <name evidence="5" type="ORF">MHBO_003561</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002136">
        <property type="protein sequence ID" value="MES1922045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050642">
        <property type="entry name" value="PDH_E1_Alpha_Subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516:SF60">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Dehydrogenase E1 component" evidence="4">
        <location>
            <begin position="2"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="22648" checksum="961115A7980FCCC0" modified="2025-10-08" version="1">MMGDGAANQGQVYETTNMAALWKLPLILLVENNKYGMGTSAERSSFCTDYYTRGHYVPGIQCDGLDVVSVRATMEFAAEHCRSGKGPIFVEMRTYRYHGHSMSDPGKTYRDKEEVKTYRKTNDAIKNCKNRILELEWATEEELKKIEKKCSIEVEEAAKNAMADEEAHKSDRFVDIYYKEIPKFIRGTDIENSYHRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV8</accession>
    <name>A0ABV2AQV8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003574</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002153">
        <property type="protein sequence ID" value="MES1922056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="10050" checksum="88D55131AB058100" modified="2025-10-08" version="1">MTPNQPSERSNNHMRLPNHHLQLVDNHMGLLNHHLHLVNHHLHMVNNHLHMVNDRLCLSNNNLYFQNNNLYLPDKHSQLPNHNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW0</accession>
    <name>A0ABV2AQW0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002144">
        <property type="protein sequence ID" value="MES1922050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22199" checksum="DF65C5B3C61D2D05" modified="2025-10-08" version="1" fragment="single">SDEGDRSGLNYTSLDVHVETLHNRWSVSITGRFFAPGGHFFEVGARVSDFEYEGEEFASETLFADKQGFAMNVTIYFPERSGIYAKVLPKIVPNIDTNYTRKPGILEKLIKGYINRKFHSFPDFIPKPSRPNVILTMRDAHGSEDFLLAENNTKPEEEITLEIRFMGYVKWKEGFDEEESEEEDDDVAEKIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR67</accession>
    <name>A0ABV2AR67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003651</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002266">
        <property type="protein sequence ID" value="MES1922137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045414354" evidence="2">
        <location>
            <begin position="21"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11792" checksum="6A29F281F3C611D7" modified="2025-10-08" version="1">MCVVSAIIIIAFFFNSLILQRESVQMQRESLAVERERLLIKKERFNIERRRLEQEEERRVRSSPCYGYTNQSSSEYELYSSAFMTILITSTLFMMYVSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA8</accession>
    <name>A0ABV2ARA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform</fullName>
            <ecNumber evidence="5">3.1.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PPP2CB</name>
        <name evidence="5" type="ORF">MHBO_003712</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010002378">
        <property type="protein sequence ID" value="MES1922200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047129">
        <property type="entry name" value="PPA2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45619">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0464">Manganese</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="4">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13148" checksum="086F483219D125C6" modified="2025-10-08" version="1">MCDLLWSDPDNREGWGISPRGAGYTFGADKSAEFNHRNNFSLIARAHQLVMQGYNWSHSRSVVTIFSAPNYCYRCGNQAAIMEIDEFMDYSFIKFEPAPTPGEPNITKRPPDYFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE4</accession>
    <name>A0ABV2ARE4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003771</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002486">
        <property type="protein sequence ID" value="MES1922263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="232" mass="27887" checksum="781A7CF4D6629F04" modified="2025-10-08" version="1" fragment="single">MFYHEGYSKVKIDCKFGKFCTRKDCFYFHPGEIIDERSLYSSKNIVNLLLSPENLNLENKDLKVQTKFNNFEKYFVLTVENHFSEYLQFIKEIEPKNVKAVCYKDKNHYFLSFQNAELNDSENNFSLLKHGKTFHFILKYCEENKRFTVYSKHSKQIFNSVNKNSRKKVNLRFYGYAGNFSSNLFSICKFYEKNKDETCQKYEKFLMNPEFNFKGNYKSDDFVYDENCNTTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ8</accession>
    <name>A0ABV2ARJ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phospho-2-dehydro-3-deoxyheptonate aldolase</fullName>
            <ecNumber evidence="5">2.5.1.54</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003799</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4 5">
            <text>D-erythrose 4-phosphate + phosphoenolpyruvate + H2O = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14717"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16897"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58394"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="EC" id="2.5.1.54"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 1/7.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the class-II DAHP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.54" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010002530">
        <property type="protein sequence ID" value="MES1922290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002480">
        <property type="entry name" value="DAHP_synth_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21337:SF0">
        <property type="entry name" value="PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21337">
        <property type="entry name" value="PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01474">
        <property type="entry name" value="DAHP_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51569">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00047508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="28398" checksum="031E77F7B060BE74" modified="2025-10-08" version="1" fragment="single">KKLRKHQILRLLEANSKAKNIFKLIKNKIYISHEGLILDYENALSSKMKNNFYNRSAHFLWIGDRTRNLKSAHIDYFKNIENPLGIKIGPNHDSNEIVQICKILNPKNVFGKIVLITRLSSEKVTRLLPNLVRAIKQNKLEVIWQCDPMHGNTTKYKNIKTRYLSKIKEEILKTVQILAKFSILLMGLHLEMTYENVFECVSELDSVEKLGRNYRSLCDPRLNFNQAKQIVSFYGDAVNKYFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK5</accession>
    <name>A0ABV2ARK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003803</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002536">
        <property type="protein sequence ID" value="MES1922294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30431" checksum="B62267734533314B" modified="2025-10-08" version="1" fragment="single">MVVIDARGKDHSKKQPSYPPYGGELLQLKGLNKGITFLEMKEKVSIALRWPVNQFRLWDQTQYEEFMTKNYDPFNRSAYRDHIPHFVDLEENEVMFPLFLTGQYIVVERIRAVLQKFPKSPKPERFDRDSWNASLRKEWKGVSPEVNKTVYRNIEIIRMERNERSNTLFNALGYQLHVLSNVKGEDESDEMKDGLTQPSRYRSARIKKYLAGFVADNSEALLESGLLEEYMENGLKENSVMKYFKALFDPFYSGFLRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS4</accession>
    <name>A0ABV2ARS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003667</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002286">
        <property type="protein sequence ID" value="MES1922151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="19062" checksum="5A0D14026FF537F0" modified="2025-10-08" version="1" fragment="single">KVTTEGDLQITSFRQAIGYNISSIRKVTLHQDKKVVTVRGTKASIRFNGRLFDSNSITKIKTADSLEASDLYESLRRSIYRRFPEIERACVGRLKWWVDVTDVLEKLIKRRNMRKLMSGDFRNIFKIDIEKIGCNRVDRLFLVVTTSNSLRQNIFDEGQPILFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART5</accession>
    <name>A0ABV2ART5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002467">
        <property type="protein sequence ID" value="MES1922254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="32352" checksum="F68B984FC76ACE32" modified="2025-10-08" version="1" fragment="single">FLNMTPDEVKSFIEVDCDKFSSGKPFSFYISKNFVEYSERDRVTAEIIQNICHLRATNMNLNNKSFKNKRQELQPKDYGLIFTNKVRIHIQILIMIRTLVSYNIYLVDEIDFTGTVNFDPSGAIVFNLIQCEYVEDPNNETVDRHCYFLLRSLYTLYEDNLSEDFFHLASHVRECLINGTDLYRSLSAPDKPAQSIFLFGLNVGNFFYLFTDYYVPYSIARLDQSEHKVNSGRHQFRVRCFKKNSHFLAVFMSTCKFAKMKTYEDWEFVYVIYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS04</accession>
    <name>A0ABV2AS04_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003974</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002871">
        <property type="protein sequence ID" value="MES1922458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045335291" description="Secreted protein" evidence="1">
        <location>
            <begin position="19"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="191" mass="21367" checksum="AE4867D504C1D115" modified="2025-10-08" version="1">MLLFIVCISTIWSIDAPAAFPGPCSVPPHGNGFKTVLFESGKGALVTCDENQGSYIKTPGPDDNSYGKKHFASYVCKYDSWFDVDSEYSSKRLMCMQGCPHLPRSDFLHAFSEEGDCTLLNEKDSTAPPSYETCIFKCMPGYFSNAKAKNHMSSSKMYCKELYGKPYWPIKDGYDLEPFVHCTEGLKLNLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS32</accession>
    <name>A0ABV2AS32_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">26S proteasome non-ATPase regulatory subunit 3 N-terminal TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003992</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002910">
        <property type="protein sequence ID" value="MES1922476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057985">
        <property type="entry name" value="TPR_PSMD3_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25573">
        <property type="entry name" value="TPR_PSMD3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="26S proteasome non-ATPase regulatory subunit 3 N-terminal TPR repeats" evidence="1">
        <location>
            <begin position="40"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="27790" checksum="6B201D3E340B82EC" modified="2025-10-08" version="1" fragment="single">MSQKHQIDSLNFILSRLIKTTSEIILQNKNLPPSELPNEGFFLKMLENFLYHKSHDCVAVTMNCLMQQFIQNKEINQAHWLRTATKFPFDENVEQNSIILHRFLNAKIDALLGDYKSALKSINIAISKSPKLNFTKVGENLEDKLDESFKTKNQPNLGKAINRSKSDGMKPSSRNIDELIEKLLKLRSILKFLNGDFSQNLFEGYFDKNDLGKFRAYSDLLNVVKSGNSEEFEIVLEANKDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA0</accession>
    <name>A0ABV2ASA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003793</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002518">
        <property type="protein sequence ID" value="MES1922283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="27542" checksum="075B28E5D68F0485" modified="2025-10-08" version="1" fragment="single">MSFISIKTNNSSREKILLQMEDFKNIQTVVIKTFGMNIFSSEDSVLKETTKVALRFSNKHFSSSKEVPVHVLRCNDTEVYRIDAKFYTYLKKNGVDQKRSSFHRNSSNSVKSSIELKSNSFLLEIFKVSSKKDNLLEFFGKCRIDADRIADSANLCKWFEITDKEGLKQVGSFYLGVLTEIQKFDLQLFIEVNDVIDEIAKYKKSSYKRKKKRMNNVFIIDSFIEYFIQKTTDKDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD4</accession>
    <name>A0ABV2ASD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003997</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002916">
        <property type="protein sequence ID" value="MES1922479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002259">
        <property type="entry name" value="Eqnu_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOSIDE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332:SF10">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="123"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="188"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="241"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="312" mass="35152" checksum="9DB65567BFA36451" modified="2025-10-08" version="1" fragment="single">MSDMEPDKLNIPKCITTVSADANSRKTFCACILIGALILSPYSAVAQSSQLWRNLFGAQKMGASNWILTLPTPFVTLLMLKAENLFSIRKRLFASWALQIPVSFGVAFFPYRYFTDHKNTHFYFFLASVFCTAFLFAVAQSSFFSFCSLLPEQFVKAVPAGMSIAGLLTMLAWLILSSTVEYKRSPLSLLLAFNGIVVVSMFVCIAAFLYLTRAAFTKKFIAPEKRKIVTFAQLFFVWRKIRLFSLLIGSLMAINFLFSPTLCFGFKSSAPMFRENWGSILLLNIAFFSAASRVLTNCQPKFFCHLFGEKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD5</accession>
    <name>A0ABV2ASD5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">tRNA (Adenosine(37)-N6)-dimethylallyltransferase MiaA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004088</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IPP transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003120">
        <property type="protein sequence ID" value="MES1922573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039657">
        <property type="entry name" value="Dimethylallyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11088">
        <property type="entry name" value="TRNA DIMETHYLALLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11088:SF60">
        <property type="entry name" value="TRNA DIMETHYLALLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01715">
        <property type="entry name" value="IPPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="115" mass="12962" checksum="6BBD8A9E1F4CC071" modified="2025-10-08" version="1" fragment="single">MKNKLIMIIGSTATGKSKLAVELAEHFNTEIISADSIKVYKGLNIASAKILEEKRKNVKFHLLSIKEPQFDFTIEDLYSKNKVPIVSGGTFYYSTSLFTNNYMTTKNFGEEILSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE0</accession>
    <name>A0ABV2ASE0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tetratricopeptide repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004099</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003149">
        <property type="protein sequence ID" value="MES1922585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039340">
        <property type="entry name" value="Tfc4/TFIIIC-102/Sfc4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23082:SF0">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23082">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="245" mass="29293" checksum="8C9BF6E33038C17B" modified="2025-10-08" version="1">MHHKKSKEAQKYLKPLENSLRYKTPRFWYLFGFSYYLLENFEKAKFYFNKVLEWKGNPGPMDHESELSTRVLLSKIYKKMGDNKKAIEILKIAENVQFLSQRSNVDISTATHKDLTTKRLFKKLNKRVEMQYNRESERYYLFSKIQLLSKQIRKMVEQNKFDLIVENTKEAIDDVLNAKIHPKQLFSADGFMEIAVVLVQLWRQEKYKNERKKSLLKLCKMAAWYLGTFNSDDNFLIVDIAFLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF8</accession>
    <name>A0ABV2ASF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004086</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003119">
        <property type="protein sequence ID" value="MES1922572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="24477" checksum="57A77170AE64ADC5" modified="2025-10-08" version="1">MVPLPLNSEGLPVNDNLRMFGLVKNRGAIKRGTTLCEDVSETLNWFASIGLPHTPFHVKKYDEFKAIKGMLKEGFVLHYQIKSGRGGYVTIGVEKHKIWWYIVLRLLREFMRHRRNVFSRRWSENLWTRLEDRNKSYMDMSAGMLRKWYKLLCKFVRWFFDRKYEKHMNLIGFESGSLGMGTMWREFLFDYPEIDDSFGVFVCCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN7</accession>
    <name>A0ABV2ASN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Large ribosomal subunit protein eL24-related N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004206</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003418">
        <property type="protein sequence ID" value="MES1922684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.1270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.170.20">
        <property type="entry name" value="Ribosomal protein L24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038630">
        <property type="entry name" value="L24e/L24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056366">
        <property type="entry name" value="Ribosomal_eL24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000988">
        <property type="entry name" value="Ribosomal_eL24-rel_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023442">
        <property type="entry name" value="Ribosomal_eL24_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10792">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10792:SF1">
        <property type="entry name" value="RIBOSOMAL PROTEIN L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01246">
        <property type="entry name" value="Ribosomal_L24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01073">
        <property type="entry name" value="RIBOSOMAL_L24E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein eL24-related N-terminal" evidence="5">
        <location>
            <begin position="4"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="100"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="100"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="144"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01246"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="18729" checksum="0C33BE8F28C9CDF3" modified="2025-10-08" version="1">MVVKTNTCFYSEHIVHPGHGFTFFRRDGKSLFFESKKAFNIYSNGTKPTKITWTTAWRRLNKKVTTTTTNRKKRTKNTKVIRPIEGMSLEDIIKRKEEKQEFRKAAREEQKREIKERNRKQMEEKKKERIAGGNKAQFEKNRSRNTNTRQFNKARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT69</accession>
    <name>A0ABV2AT69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Lipoyl synthase, mitochondrial</fullName>
            <ecNumber evidence="8">2.8.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">LIP5</name>
        <name evidence="8" type="ORF">MHBO_004392</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.8" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010003918">
        <property type="protein sequence ID" value="MES1922864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016992">
        <property type="term" value="F:lipoate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003698">
        <property type="entry name" value="Lipoyl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058240">
        <property type="entry name" value="rSAM_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10949">
        <property type="entry name" value="LIPOYL SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10949:SF0">
        <property type="entry name" value="LIPOYL SYNTHASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102114">
        <property type="entry name" value="Radical SAM enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="1"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18504" checksum="11756297EAC9EDF2" modified="2025-10-08" version="1" fragment="single">FNGKKSSIAKVVDSNLDVFAHNVETVEECTRFVRDRRANYQQSLNVLEMAKKIVKNGNSDRKMLTKTSLMLGVGERDNEIKKTLIDLRQRNVDVVTFGQYLRPTKRHMKVFEYVKPEKFEMWKDVAEKMGFLYVASGPLVRSSYKAGEYFLKSILRENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT90</accession>
    <name>A0ABV2AT90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004131</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003226">
        <property type="protein sequence ID" value="MES1922613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13623" checksum="B25C97B35F69EDC6" modified="2025-10-08" version="1" fragment="single">PFEDYDVNDNFDFRNGEFEDFTDFDNVDTDIQNEIDDLNINDDDFETGGTGTFEDNYDDLFNETPTDPFEDYDVNDLSRFIKNGFEDFNDFDNIDTGVQNGIGEVNINDDEFEIGETG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB5</accession>
    <name>A0ABV2ATB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C1q domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004029">
        <property type="protein sequence ID" value="MES1922915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001073">
        <property type="entry name" value="C1q_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00386">
        <property type="entry name" value="C1q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="TNF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50871">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C1q" evidence="1">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10856" checksum="B1988B38809AEE4C" modified="2025-10-08" version="1" fragment="single">FHATLSSSDTDTINFDEIHINQEHRYDSVQGKFTAPTGGLYVFMTSIIGKNAGDYDFGFRINGNQHFVGCIKTAQNSNLYDNNGIMVARVLQAGDTVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF8</accession>
    <name>A0ABV2ATF8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Coatomer subunit delta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004463</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5 6">Cytoplasmic vesicle</location>
            <location evidence="5 6">COPI-coated vesicle membrane</location>
            <topology evidence="5 6">Peripheral membrane protein</topology>
            <orientation evidence="5 6">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5 6">Golgi apparatus membrane</location>
            <topology evidence="5 6">Peripheral membrane protein</topology>
            <orientation evidence="5 6">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the adaptor complexes medium subunit family. Delta-COP subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004077">
        <property type="protein sequence ID" value="MES1922932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14830">
        <property type="entry name" value="Delta_COP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027059">
        <property type="entry name" value="Coatomer_dsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10121">
        <property type="entry name" value="COATOMER SUBUNIT DELTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10121:SF0">
        <property type="entry name" value="COATOMER SUBUNIT DELTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="5" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU366052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19258" checksum="2F286C2EECCB8811" modified="2025-10-08" version="1" fragment="single">MALISAAIIDSNGKPILSRQFKDISSIKIGSILSIFPKLLGNGRNINYVEKDDIRYIYRPLDDLFLLLVTSLESNFLSDLDLLNVLSKSVLDICNGQNEASIRQNCFEIIHAIDEAVFQGYKQISKNSFDLMKAVNFDSKEDQLMDLMLKSKEDSAKKIADKKVKDFKEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI3</accession>
    <name>A0ABV2ATI3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004483</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004134">
        <property type="protein sequence ID" value="MES1922952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15205" checksum="146FAD2B5EBD91F0" modified="2025-10-08" version="1" fragment="single">LNKVQNQELDKHESGRNEDIDYNVFLGYIINISLSIAAVHRQTGFSVYVFNDTSYTPPSTDGLVFAHNPATCPNQMMNVTVNRVAKGIALYNSKTFPLQTRCAGYSRQHAVIEICEVRVMGKVDFITICIVEYVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ9</accession>
    <name>A0ABV2ATJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003805">
        <property type="protein sequence ID" value="MES1922814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16470" checksum="D35FA2A37BC31EB9" modified="2025-10-08" version="1" fragment="single">MENKQTYTFEEDELMATVPPTWEKVLRSEKEEFEATKCSFKAKEHDRCCKTVMDFTISRIISENDLTNIYEVEDTATKEHFAVKIYEKRDEQFYQDNEIRILTILRDIEGYFVRCEHLFTTKTHNIIVLELFVSNFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP5</accession>
    <name>A0ABV2ATP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004388</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003908">
        <property type="protein sequence ID" value="MES1922859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11469" checksum="17957B402E185FF1" modified="2025-10-08" version="1" fragment="single">MWCLLDWYEIDNIQKCLGNGNLNTFLLHIQQVNLANSDQFPHATVGTNKSFNTPYLRRVIDSDENTCIQLTDGEKWIKVWLAKDANVGVLTVTSKKSGKLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU7</accession>
    <name>A0ABV2ATU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004629</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004624">
        <property type="protein sequence ID" value="MES1923090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14190" checksum="97A26DBF2E0B083B" modified="2025-10-08" version="1">MASVINTNSKFTEARAKVVKIQKKLFKNELRLIAPHRYVVAMSKMNTIEKSTLFKKSNKYLFVLFNDMLLWADIRKGGRSYKLSFLLAKIGARYSAGEGDSYSIDVVGTRQSFYDQFKRKWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY6</accession>
    <name>A0ABV2ATY6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004661</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004746">
        <property type="protein sequence ID" value="MES1923119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6695" checksum="E6CCB433C2B1E8AC" modified="2025-10-08" version="1">MEFLTFISTFNDPHIKDETFLNGSVVTVLNANPYIISHNGNTTDNIESCDPVNFFVSSNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY9</accession>
    <name>A0ABV2ATY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NIF system FeS cluster assembly NifU C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004496</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NifU family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004183">
        <property type="protein sequence ID" value="MES1922964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="entry name" value="Fe-S cluster assembly (FSCA)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001075">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11178:SF51">
        <property type="entry name" value="FE_S BIOGENESIS PROTEIN NFUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11178">
        <property type="entry name" value="IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01106">
        <property type="entry name" value="NifU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="Fe-S cluster assembly (FSCA) domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NIF system FeS cluster assembly NifU C-terminal" evidence="2">
        <location>
            <begin position="5"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9364" checksum="801A200BF800116C" modified="2025-10-08" version="1">MLRKIEKVLDAEVRPGLKSHGGTVELIDVDNNKLFIKMAGGCQGCSSAQTTVKSGIEKLIKDKFPMIEEVIDLTDHAQGTNPYYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE4</accession>
    <name>A0ABV2AUE4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein S7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004622</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004590">
        <property type="protein sequence ID" value="MES1923084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="167" mass="20303" checksum="B15E3EFAC0E14C13" modified="2025-10-08" version="1">MSYKKEDKMEYLQEIMNKLNKNFLENAPFSLELLEEILEMGKDIPVSYIKDVLVKYDHYELLSFSNNHQKNFRSLLSFLCAVSKKKKYLIVLLPIFNRTIIYLRRQKVNKKTYRRYFREFLLNVKNNAQKENIEIARKNLFNFQIIKKDRDRDSRRFVRGKEKGYLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT5</accession>
    <name>A0ABV2AUT5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">LIM zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_005007</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006192">
        <property type="protein sequence ID" value="MES1923435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0440">LIM domain</keyword>
    <keyword evidence="1 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LIM zinc-binding" evidence="5">
        <location>
            <begin position="29"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="103"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="109"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="136"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17603" checksum="62C1E01AB18BAA0B" modified="2025-10-08" version="1">MYVGYEWRVKKGKQTYKYPEDLSNKGKTFRCNYCGKKSYPAETATYERIPYHQSCFRCLMCNKKLTTGSSINKIVKLFKNLANATPFGEEVFLCDTHFERFGQGGGFPKKNEKVEKVEEVKEDDDEMANLSAVERRRLRRKRMKEKKNGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV09</accession>
    <name>A0ABV2AV09_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Immunoglobulin I-set domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005068</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006437">
        <property type="protein sequence ID" value="MES1923492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036179">
        <property type="entry name" value="Ig-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48726">
        <property type="entry name" value="Immunoglobulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="70" mass="7865" checksum="6ABE6CEA8EAF889C" modified="2025-10-08" version="1">MVAKTKQLNLNRKKYEGSSNDHHKPTLVINNIDTSDCGYYILRVENVKSMAESESITIDIIGGKLKISKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE9</accession>
    <name>A0ABV2AVE9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007360">
        <property type="protein sequence ID" value="MES1923635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13774" checksum="C79AD5DE7F95D633" modified="2025-10-08" version="1">MKVIGDVNKLPDQDLEILRAQVELVQQTRRQYKRREFLKNNPPIGYALHNEGSWKHFWADFADVDYGIIHKELVDGYRLKLVRNPELAVQLKSDPDIVYFNPARNTSTGEFSDIAEKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG5</accession>
    <name>A0ABV2AVG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005016</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006230">
        <property type="protein sequence ID" value="MES1923444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045256607" evidence="1">
        <location>
            <begin position="24"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15021" checksum="E284DC47598FAD97" modified="2025-10-08" version="1">MKMKFMDVCTSLAVFFLISFVSGLKNHNEDGTFQIRMVEFQRMQKRMKVLEEMVEKQTEIIHFQNERIYKLESVSGLDNPESVIVNNEIKEKFRHNIRTSLLRSNTMGFQSSNDVEKGELWQLQRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW69</accession>
    <name>A0ABV2AW69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005189</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007041">
        <property type="protein sequence ID" value="MES1923591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14772" checksum="71D00C57D0C97550" modified="2025-10-08" version="1" fragment="single">AIVMFHYPQCDAIMSKMDTPMNFIKNLSNISFQKKFIDSLSEENRFKFYKMAVKLLEENSRVYQSDYKLIENAFYIDCNLFEKAVQHISEKEETDPKKRKKILELLEMLKSNKEELEFIKQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE57</accession>
    <name>A0ABV2AE57_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial</fullName>
            <ecNumber evidence="12">1.3.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">SDH22</name>
        <name evidence="15" type="ORF">MHBO_000021</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>a quinone + succinate = fumarate + a quinol</text>
            <dbReference type="Rhea" id="RHEA:40523"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </cofactor>
        <text evidence="12">Binds 1 [2Fe-2S] cluster.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
        <text evidence="12">Binds 1 [3Fe-4S] cluster.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Carbohydrate metabolism; tricarboxylic acid cycle; fumarate from succinate (eukaryal route): step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 12">Mitochondrion inner membrane</location>
            <topology evidence="1 12">Peripheral membrane protein</topology>
            <orientation evidence="1 12">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.1" evidence="12"/>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008177">
        <property type="term" value="F:succinate dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="entry name" value="Alpha-helical ferredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050573">
        <property type="entry name" value="SDH/FRD_Iron-Sulfur"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004489">
        <property type="entry name" value="Succ_DH/fum_Rdtase_Fe-S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025192">
        <property type="entry name" value="Succ_DH/fum_Rdtase_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00384">
        <property type="entry name" value="dhsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004616">
        <property type="entry name" value="PRK05950.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11921:SF29">
        <property type="entry name" value="SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11921">
        <property type="entry name" value="SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13085">
        <property type="entry name" value="Fer2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13183">
        <property type="entry name" value="Fer4_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="2Fe-2S ferredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46548">
        <property type="entry name" value="alpha-helical ferredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="11 12" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="4 12" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9 12" id="KW-0408">Iron</keyword>
    <keyword evidence="10 12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="12" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="8 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="13">
        <location>
            <begin position="32"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="14">
        <location>
            <begin position="172"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU361237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1917986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="30524" checksum="DB638B531957FDD8" modified="2025-10-08" version="1">MLSKTRKPLIFLKAQKRFFSGPVAADSVNSKKSVSFNIYRWSPNNSSKPKKIEYKIDKKQCGPMVLDALIKIKSETDSSLSFRRSCREGICGSCAMNINGSNGLACLTPIPDSSKTTTVLPLPHLPVIKDLVVDLTNFYEQYKSIKPYLIKKPSKQNNPKSKEKEQLQSIGQRKLLDGLYECILCACCSTSCPSYWWNPDKYLGPAVLNQAYRWIIDSRDGARAERLKDLDDEWKLGRCHSIMNCVTACPKGLNPSKSIGEIRKLIAEELH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC4</accession>
    <name>A0ABV2AEC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000102</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000012">
        <property type="protein sequence ID" value="MES1918080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10843" checksum="E9E89CF570C0C5BB" modified="2025-10-08" version="1">MSEEIEVDAKLSERRQLTLTQEKERQRYRKIKKTAEKERRAAEKTRRITQVNVTSFDKNLNQDLNSYYCAFCGAFAIVMRFNIIFRNRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AED2</accession>
    <name>A0ABV2AED2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000103</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000013">
        <property type="protein sequence ID" value="MES1918081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00593">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1520.10">
        <property type="entry name" value="Ribonuclease III domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.380">
        <property type="entry name" value="Zn-finger domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000999">
        <property type="entry name" value="RNase_III_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036389">
        <property type="entry name" value="RNase_III_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001876">
        <property type="entry name" value="Znf_RanBP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036443">
        <property type="entry name" value="Znf_RanBP2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14950">
        <property type="entry name" value="DICER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14950:SF37">
        <property type="entry name" value="ENDORIBONUCLEASE DICER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00636">
        <property type="entry name" value="Ribonuclease_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00535">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00547">
        <property type="entry name" value="ZnF_RBZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90209">
        <property type="entry name" value="Ran binding protein zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69065">
        <property type="entry name" value="RNase III domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50142">
        <property type="entry name" value="RNASE_3_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01358">
        <property type="entry name" value="ZF_RANBP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50199">
        <property type="entry name" value="ZF_RANBP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RanBP2-type" evidence="8">
        <location>
            <begin position="412"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="domain" description="RNase III" evidence="7">
        <location>
            <begin position="1134"/>
            <end position="1276"/>
        </location>
    </feature>
    <feature type="domain" description="RNase III" evidence="7">
        <location>
            <begin position="1325"/>
            <end position="1415"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="691"/>
            <end position="738"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="691"/>
            <end position="701"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="713"/>
            <end position="738"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1427" mass="165441" checksum="BE0A2195BBA61883" modified="2025-10-08" version="1">MQDDQTIRKRIEKRIDNFFVSSHGAIPSNPKTWATVLQTSIARKEIESGEISDALLSDALLYAVKKSIQSGAMSKNTNIIEVDESEAIDMDRSLLRRAICFAKKYVHERKERRTFPKTPVKWLNVLRSEIHPHFPFAFPEYALGPVANKVCRWYLNDSPLSEADKNKSKFPIAGETLPSDAFEQNDTSNALNLEDDNFIDGRTRQNSLKLENTQFVRDVLGEESQKVEVQKQKKMPLLHEIEENDMEKLHLIRKSAIHCLFCGANLTLVKNLIFVKGHRLKQKVKDRLGVMVHYVAKTITGDWYSQKPEKSTKARCFSCSKVIGWPYLFGDKQIYILKNKNILFKMGNQSLILTVADLKKQNSKYVTEAFWRFLKSKVSPSIKQTWNCINCTSENIERKQTKCDICNYNRISKDEWACLFCTFFNEKTAQNCEICNSPREKADKIRIEKIKIVQKSVNLLSKNSESVEKMTEKENISENKNEMKVEKFKKAEISRKSVDEEIKNEESLDSIFNFFSFDKKDKIHPEKEDKKWREQIKIGTQLDFRTSPQSLGKGNWVPGIVVQIREEPRGLSLEIIYEGYPRSFEWVPIVSARISPHKSKLNEYQIPETLPPKFYKYTSYSDIDFKNDSSNNNALKSNSNNDLSEKLIKDGKTDEKIKLFDNEKSFDNKLILGKKSDKENFIENLQCKKDSVEKPENKNRGNNDISKFFGNKSEIENNKMEKNREISENKEEKEMDIKDRSETEIENFAKKFINSHGGASFIFNQSKGTKAEFDINLGEIYNFKEYQGDSRYVETQILNNLPKMNRTKDAVPDEFKGTCSWGYMSDRAKRQQISKKAVENPKDHIEYSKSVFVGEEQMQLFCYNIVFEPKTEKQIETMDSFAILLQQKIEEPEIAFDVYLNTKEVDIPNTNNDAVAKFVPRGAQIFNFKQIERIKTAHCFLNDLLSHARIHPEMLMDSDAPMFLVVPLDERKSVDWSCIDRINETVKNGKTNFVDYLKPSNSENRIPFDQLVLTTIYNTQEQHLYTFTKFQQNLSAFSKCDNENAKVGASWNSFFKSEFGITLKHPELELFTSRQIHPRAHSVLIPPSVAKSHVPPTLNLVQELCEVHPVPLNLVTEMPDVVSTIWGLQNSLSVQRFLRKLPVPVSLSLLEEAMTFSVANNFRNYELLEFLGDSVLKYLATDYLFCKFKNTEFFREGNLTEKRKDLISNTSLLEYGKKHQIYNYSIISQFQRKDYIPPCFVKNINKKFKVENPIVTKKQIADLVEAVLGATFLSSNNEKSRFEAVTEVLKWFGSEIELPSIDDGFCLLSQVPKKDRENVEMAKKIQSLEEKLNYCFRHKQYAMEAIYQGERLSSSKNHELLEFLGDSVLDFLCTRKLFYVLPNTSPEDLTEARIELVCNDSLAETFESFRMEKFVYKMFLMSNQKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEL9</accession>
    <name>A0ABV2AEL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cation-transporting ATPase 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">SPF1_1</name>
        <name evidence="8" type="ORF">MHBO_000163</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006544">
        <property type="entry name" value="P-type_TPase_V"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45630">
        <property type="entry name" value="CATION-TRANSPORTING ATPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45630:SF7">
        <property type="entry name" value="ENDOPLASMIC RETICULUM TRANSMEMBRANE HELIX TRANSLOCASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16832" checksum="6C2FEE4E82006BE0" modified="2025-10-08" version="1">MNISENIAFEQILPDANDAEDNFEMSPANTMSFYLSGFMNLGTFYSNYIGQPFMESVRENIPYFKVLVMAAFFLFSSLLGVLPFLNGYLQLVPLTDSEEFPLILGLLFLDFIGVFVLERFLRFYFAVNPSKDEVEEIKMLEDRNLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP9</accession>
    <name>A0ABV2AEP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000171</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the major facilitator superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328:SF24">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY (MFS) PROFILE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13347">
        <property type="entry name" value="MFS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="67"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="114"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="17770" checksum="ABF08B4AC5CE6557" modified="2025-10-08" version="1">MTSMFFFAIPFIIVIAYVPKGLVGKVVLVFVAILSGFGTAAGFYLSSCMLNDVIVEDYIKTKNNREGAFSSIFIFFQKVSVGCAHGLTGLIIQWSGTVTKKPDGSFAKEQPKSIINAIRYGASVLPLFSVLCCIFWLYLYPLTKEKVQSNQEKINEMRKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF72</accession>
    <name>A0ABV2AF72_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SCP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000314</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000044">
        <property type="protein sequence ID" value="MES1918335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05379">
        <property type="entry name" value="CAP_bacterial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014044">
        <property type="entry name" value="CAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00188">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046082408" description="SCP domain-containing protein" evidence="1">
        <location>
            <begin position="18"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="SCP" evidence="2">
        <location>
            <begin position="34"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19594" checksum="0EC037C207080391" modified="2025-10-08" version="1">MLLFLFAIAQLITKTHVVQINYCSCNKDGLTFINQINEEREKHNLTKIPTSSSLCTVANEHVEQLSTNSSIYEPPCNLHSWEDCCYTEKNPQCMWLKPIEITNSDSLGYEIAAEGQKDSAGALRSLMNSPNHREVILNEGEWVQKKWKSIGAGIEDKFYVAWFSEEEDDVNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF81</accession>
    <name>A0ABV2AF81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000131</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000016">
        <property type="protein sequence ID" value="MES1918114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="254" mass="29775" checksum="B36F4B1FC3401B1C" modified="2025-10-08" version="1">MVHITNSSNPKLNTDNLYNSNNIYRQKQLNSNNTNAITNRNLANLEYGFEKQGKMRAIVIKNISAPLQIKIHCDTLRFTSSCEKSGAMKFYFQPDWNKHKVFVTDRGLIVKTISLDPCVPKATFVKNRKRKILIENLKNPESIKLASTNKMNWSLQPCQEKDTFILSLYPHGNKHSVKIFVADSENNITLIKNGSFKFEPLKPGQKMDNFQKNWSDQRQSYYPPPYFDRYAFGYYPQNYHSLYRPNDEFYCPRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFD6</accession>
    <name>A0ABV2AFD6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">tRNA-His guanylyltransferase</fullName>
            <ecNumber evidence="3">2.7.7.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">THG1</name>
        <name evidence="3" type="ORF">MHBO_000374</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.79" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000057">
        <property type="protein sequence ID" value="MES1918405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008193">
        <property type="term" value="F:tRNA guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024956">
        <property type="entry name" value="tRNAHis_GuaTrfase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038469">
        <property type="entry name" value="tRNAHis_GuaTrfase_Thg1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04446">
        <property type="entry name" value="Thg1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="tRNAHis guanylyltransferase catalytic" evidence="2">
        <location>
            <begin position="82"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="374" mass="44110" checksum="FCCB155C4126BA82" modified="2025-10-08" version="1">MFEKSSKCVLEWWKTCFILFSASILSIWTNFWVPLFLFPFSLWIIGLFIATSQQNEYNKKYPHEITPSERARLLEEKNSLTQNLNWKKTQIVVLQGRNFPENFKKPFDQRIPNSLSRATADTLESFRASTAYTYGQKVYLLFPPHDDPPRRLKICKTVTEAVSAISSFLTIRFFDHLQKMQFGAEEKELKSDVFEHFSAYFAGTVVSVDTKKEALNYFMNANLKECLGYGLRKLALLHFIPSEIFGLTNNQIIRKLKLKRKVQWSDQPNNIKYGVFVKLTEKRDTIYDEKSEQNRMDEKSVDNDEQSNVVVKSEEIIENEKMGMPEQIYINEETFERKNRNRSKLSLLTRVLNFNHENIDFLYSRELKERFAEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL1</accession>
    <name>A0ABV2AFL1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000406</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000062">
        <property type="protein sequence ID" value="MES1918437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="114"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17199" checksum="63AE5DDA108ABF5C" modified="2025-10-08" version="1">MSKINSEKTNIWLLKKYYENNVLLQTKKTIRKDLKKRLENTSPENVKLKTQILEFVEDFVVAADKVFDEKAIDCDMVRLFEEIAIMSEHSKIISNLNSKNKFYKKLIFDKIELVKRLAEQISAAEKELNSMRQLANEKRVQLNCTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM7</accession>
    <name>A0ABV2AFM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000073">
        <property type="protein sequence ID" value="MES1918501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="16"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="118"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="151"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="15085" checksum="14E89E7E12EA3901" modified="2025-10-08" version="1">MKDCFQDCYEKKPDASPGPPGPCGPPGAMGEPGQKVKGPPGEPGCSGKPGCPGNQGEDGVEGLSIIGPTGPKGFPGQPGPPGPPGASATIPGPTGPQGPPGPPGIPGDAPPGPPGDLGLVGFGGPVGPLGEPGLIGPPGPPGPPGPPGSPFSSASARSRNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS2</accession>
    <name>A0ABV2AFS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000461</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000072">
        <property type="protein sequence ID" value="MES1918497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="143"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="359" mass="41938" checksum="80948607648C0D17" modified="2025-10-08" version="1">MDLLYKKLLNFNKNLVFSLNWNKIFLEELLLQPTPFEKSQNNTCGVNNKKSFGDCGNKTEKGQICYIKQLSYRSPLILKNEITDLATNTPKNNFEPPFNMKIIDIPQKPLINFSSIFKSPSSATFCNEKEILNKKKSYNDEKKYSNEKSCNNEKEKLDNKKSNIGKKDSNEKSFNVEKIDADKISHRLSINGVKILYEEKLITALRTLWCQYINFLICRNNNIDSNNDKTESKYKKLKIPKKTFNRDTKTLLVTEIKNAQINLQIRKKCVQIVFATRKLRLQVEKYFYRLSTITQIFLEKICKECEEWDGSFMNAFHFAFEGAQIFLSPTDIDVYNQVHWIADLIFGNNGLLKSIKYVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG55</accession>
    <name>A0ABV2AG55_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sushi, von Willebrand factor type A, EGF and pentraxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SVEP1</name>
        <name evidence="6" type="ORF">MHBO_000585</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000099">
        <property type="protein sequence ID" value="MES1918646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050350">
        <property type="entry name" value="Compl-Cell_Adhes-Reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19325">
        <property type="entry name" value="COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19325:SF575">
        <property type="entry name" value="LOCOMOTION-RELATED PROTEIN HIKARU GENKI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00084">
        <property type="entry name" value="Sushi"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00032">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0768">Sushi</keyword>
    <feature type="domain" description="Sushi" evidence="5">
        <location>
            <begin position="29"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="356" mass="41268" checksum="55281D6B2D032F93" modified="2025-10-08" version="1">MGENAILECIYDEENDLAIWNNIFSCNKKKCSVLKIPNSIIEEINENLEIGNTFKIVCKDQFKLVHSPSTIKCLYNENYHIAEWTNIPVCSIKKCPEILIENSNISNVSLEIGNEIEIICHSQYELKPSSKKLHKLKCGFDEITKEAIWEDLFVCEKMQCDLSDLRIENSVETVGIIESSDPIGSKHFIECDEQYDLVYENNDGKFYNPEIPIECKFDFFENKPFWNFCPELYIDNSENASEVLDFEIGSVFRVECDKIYRLSDEDNEIKCVFNSTLKEAVWNKKVTCVKKNCETINIENSVLEENLEHFVHGDIVPVSCKLGFEPDKDTNEMKCSFNEQSNRMEWSNVVYCVISF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG57</accession>
    <name>A0ABV2AG57_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">mRNA cap-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000404</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic initiation factor 4E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000062">
        <property type="protein sequence ID" value="MES1918434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.760.10">
        <property type="entry name" value="RNA Cap, Translation Initiation Factor Eif4e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023398">
        <property type="entry name" value="TIF_eIF4e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001040">
        <property type="entry name" value="TIF_eIF_4E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960:SF18">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E HOMOLOGOUS PROTEIN, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01652">
        <property type="entry name" value="IF4E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55418">
        <property type="entry name" value="eIF4e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="219" mass="25295" checksum="E57AF2C9EC5C500F" modified="2025-10-08" version="1">MDSKKLQLKCNWRLFYTKTKAQRQNLNQFISHLEKIADIETVEDLYKHYIHLKRPSELVSKDNYMFFRDGLIPAWENFPNGGCWIIKVSKNNGLIDRIWEEIIFAAACEKFLDLDMIGIMVSIRGREDKISIWNRGSKVLNNGERLRKILNLDPETHLQYQSFSHAVEVGATYRDAISFVYKPFFYKSSGVDNKIEHKLGKKDDLVGASSKGDAGEATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG59</accession>
    <name>A0ABV2AG59_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">40S ribosomal protein S3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RPS3</name>
        <name evidence="7" type="ORF">MHBO_000580</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000099">
        <property type="protein sequence ID" value="MES1918640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.32">
        <property type="entry name" value="Ribosomal protein S3, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036419">
        <property type="entry name" value="Ribosomal_S3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057258">
        <property type="entry name" value="Ribosomal_uS3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001351">
        <property type="entry name" value="Ribosomal_uS3_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11760">
        <property type="entry name" value="30S/40S RIBOSOMAL PROTEIN S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11760:SF32">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00189">
        <property type="entry name" value="Ribosomal_S3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54821">
        <property type="entry name" value="Ribosomal protein S3 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS3 C-terminal" evidence="6">
        <location>
            <begin position="2"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="109"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00035408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14413" checksum="417E883675F9AE78" modified="2025-10-08" version="1">MKFIMMNEANGVEIDISGKLRGARGKTVKFKSGYMVKSGSAKEDFVVESIRHVNMRQGVLGIKLRIQLPSGGERGELPDVVKVKKPMELVEDEGEIEVKQPMQRKVIIPRNRRSARDIDTNPLIPQNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG98</accession>
    <name>A0ABV2AG98_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000626</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000109">
        <property type="protein sequence ID" value="MES1918701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb-like" evidence="3">
        <location>
            <begin position="259"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="116"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="213"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="448"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="582"/>
            <end position="609"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="124"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="149"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="160"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="214"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="233"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="636" mass="73977" checksum="DF2A23B517344A35" modified="2025-10-08" version="1">MKNKIATMSAFEKNNLVASSAHLNCLEVQNGCELSETVKCSSKRLLMSQNVCLNELENKLSIECKDRIGKSKILKNELCNFSLNEPAILQSKNEERNSDCENSQNWPMKNFSSLIIKKSATPKSDPKSKPVKNEIRREGELSPSPSNEMSKDESEDSKTKTGKRRNNKGKIAKRKISKTKKNLRTRYTIKLRARDKLKRRNIFDDSIYDEYDSLSDSSSSNIIEKNSENSVSTDSPPHNDMTNSPQIPKTKRKKNSFVKWSLEEEITLRDCVLYQSQESKTIAWKSVMDMMPQRYQNRTPKKLRNKWRKLLFRKDFVSEADLKRLYRGKKDTALTKKDENALQIPEKPVTLREKILARKNGQLLPNEENADFGTNKNWDKTFIVKKLDKTTIERQNKNFDYNDAIAEKWLKSLEKRIEKTKSDKIKSLDDLCSSADFQVAKNLPVAPPKICGKEKPKPPISQSPAKFPVQKSEPPPLVWAIERYRKTGRSAQHNLVSLKTPAGPKRTSYSMPNYCRLFSPYRFGSLCSKRVPRLEFNTHHSYDRMNTMQLESLFFTYTRNIRIKRFKISECEAMAEKGKKYSKDKSKRYSELKKRLEKEQALANQMERNDEKILWQLQSMQMEFSLLHRKRAQLSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGA9</accession>
    <name>A0ABV2AGA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000644</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000114">
        <property type="protein sequence ID" value="MES1918726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="274"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="360"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="452"/>
            <end position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="581" mass="65142" checksum="EC984C606859ED32" modified="2025-10-08" version="1">MSFTKNDNLKKWALHGEALLKLGLEFFKKVHSERNLLLTEPSPLDELESLKLPNGKVSNHLLDKSRVRTPLDAAESPLELNELFISPLLANSVEKQRWDLGDFLKQNENYMTNLIESAESTKKFSEDFEQCVQRNSQKDLDLKNLQMNHIANFIIKEALSYFGNTIKIDKMISNDCIPSLNFDSLKKAVHGNFPEEDKDEACRSPANTSSDDLAPAFIPSQEFTKNFRKTLRRSSKVYARILLEIYEKLNAFEFYYDPLPDQLLSGETRKIKEVKLPQKIPPPPLEQNSSRTVGAEDGDLDSNDRIFGRRNSAVFKKRSKSLPDRRSADPDDLDCSGAIQTSRAFQGDFGPRKVAIEMRRSSSKEGLPRYTPAKHAAASPFPARRTVQRRVITPLPPTTQYRPPLKQAAMSSSFNAYRFQRIVPTYPSSINPSPLTHLTTLTNPMNFVSASMAGTNKGRRPVGNEVESGGKRAKLSAESVQVEERNSSTMLTSFIEQQRAGLHFSSRFRSSPEDKKEEAFSVGAGGGREVGSGFLSPKIVRRILNGRKELLNGIGKAHVIPPPPPIVRRGVLVRTAFPISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM0</accession>
    <name>A0ABV2AGM0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GRB10 interacting GYF protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">GIGYF1</name>
        <name evidence="2" type="ORF">MHBO_000711</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000130">
        <property type="protein sequence ID" value="MES1918808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003169">
        <property type="entry name" value="GYF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46695:SF4">
        <property type="entry name" value="ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46695">
        <property type="entry name" value="ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02213">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00444">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55277">
        <property type="entry name" value="GYF domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50829">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GYF" evidence="1">
        <location>
            <begin position="58"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="GYF" evidence="1">
        <location>
            <begin position="131"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23693" checksum="9D7CA44F74578C2C" modified="2025-10-08" version="1" fragment="single">HFPAHIKTKSVEETSFRRIDKIPIFSVIYYKKEQKPPGKTELGEVDVSTVGPPPKSGEIHWLYIDNEKKVQGPFANSLMHKWHEDGHFDRSLLVRKYENEEQNKLLVRSDFCAISEIKNCDVVKDWQSFERLNWFYLDEDGNEQGPFSSKTMLKWVQRGFIPGDLQLRSDISTEYALISSFAKPFGEKCFLHDFSPGNAKMDLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP9</accession>
    <name>A0ABV2AGP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000737</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000136">
        <property type="protein sequence ID" value="MES1918838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043198">
        <property type="entry name" value="Cyclin/Ssn8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10026">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="26073" checksum="A60F9FD22762CD23" modified="2025-10-08" version="1">MHFLVKENEKYNVANACIFLASKSEECRKSLKDIIRCQFYLRQSKSPQKNSKTYMLLHDAIIISESKLLQAIDFCFSVSHPFQFIHPALQFLFANSKKSLDGKDEQEKVKGLSKLAWNFANDSYRNTVCLFHPPQHVALACVELAFRYNNCVAQIFGKDEIYVSLYWWEIFDDNLSENMLLFICDKILAVYNEQGKYVKMRHLSNCLSFRENPPLGDDSKLTNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH80</accession>
    <name>A0ABV2AH80_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Neurochondrin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000914</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000184">
        <property type="protein sequence ID" value="MES1919040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="642" mass="74639" checksum="BEF6976F52F30521" modified="2025-10-08" version="1">MQMANVQKYLKLCSSNINEEKIAGLLLVQKYLEQNSKNKDETLLLLEKTYFSIDQKFFNAILKNKKIEYKNLAIDLMASFYLNPKLRNDINQNIDILINEYFAIKSNFNRFDNLLDLILLIFNDESSDFTGKKFDQFFNKICSDISAFAQHKTLSEMLILLITKSNAKNYLEILVKNLQNNFDDCFLDAVLAVLLIDNKPQILSSSEIILNLKAILFCILSNKSLKNDKSLKILNVLSDLTKNGIFDVQVSAPNLGKFCQNAQIDSNFVNKDFSKIVLTVLNIEIKLLLDKIEISSKDEKRFSSVGMYQSLLGNILDLVILGKIDFFGLQNLLTDLHENVFDNVGKHFEEIDDIYIDPLLAIMVRWLAENIDYGEKTPKKLNIVFKIFKKRENALFHFMPVLSYHYLLKEDLSQIIFDNSSVCIAINKISQIADSVISTKKCLDSNQIYCYNNCIDLIISANSHCHVLFSEQLEKTEKIFEKIFQRRSKFSSNMLRKSLFLLTAIMSFFAKTQKNIKFVSEKQFLGIFRKIFEKEILLFEDNELDWNPILKNLGDIFDCSEFIFDKNEIFENVEWLNPLFEFQKNSRFMAEHKILFENFLFQIIFSGDNGILFARNLTKNYKKAIQNNFENLGNFLIDITKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHA5</accession>
    <name>A0ABV2AHA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000933</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000188">
        <property type="protein sequence ID" value="MES1919061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8201" checksum="19367D1A985D06DD" modified="2025-10-08" version="1">MKKKPLTTMFKDYEDGADIAKALEFVKKKFMERAGGNASLISCHFTCATDQNGIKEAIQSVMSKTAKRRRISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHE9</accession>
    <name>A0ABV2AHE9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein MAK16 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mak16</name>
        <name evidence="6" type="ORF">MHBO_000957</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the MAK16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000196">
        <property type="protein sequence ID" value="MES1919090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006958">
        <property type="entry name" value="Mak16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029004">
        <property type="entry name" value="Ribosomal_eL28/Mak16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23405">
        <property type="entry name" value="MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23405:SF4">
        <property type="entry name" value="PROTEIN MAK16 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04874">
        <property type="entry name" value="Mak16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01778">
        <property type="entry name" value="Ribosomal_L28e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003352">
        <property type="entry name" value="MAK16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ribosomal eL28/Mak16" evidence="5">
        <location>
            <begin position="6"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR003352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01778"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="27579" checksum="707A421B512D38D6" modified="2025-10-08" version="1">MQRDEVIWNVIGTKHCSFRAKQRSQNFCRHKKNATGICDRLSCPLANSRYATVLHGRDGISLHIKVVERAHSPNKLWERVLLPENDAEALKKIEKELLYWPEKSVERCKKRFVRTRQYMKRIEKLKRKNRALVFGVKKKIERREKRREEKAQLAAKITKNIKKELIERLNSNIYDEEIVNIPAREYDRVLDEMALPENEFVADFESENDLEDLDEMFDDIEAAQNEQLLQKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR4</accession>
    <name>A0ABV2AHR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001077</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000228">
        <property type="protein sequence ID" value="MES1919216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8507" checksum="27FC5E39AA102CDF" modified="2025-10-08" version="1">MLNQKANSKDDRYSLSLNIPFERPKIIGYNANYWGIFINWLCTLSRMMMIIYLTLRITDLALFIVLSFLIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ5</accession>
    <name>A0ABV2AHZ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Proteasome subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001156</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of the proteasome complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peptidase T1B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000251">
        <property type="protein sequence ID" value="MES1919301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03759">
        <property type="entry name" value="proteasome_beta_type_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033811">
        <property type="entry name" value="Proteasome_beta_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016050">
        <property type="entry name" value="Proteasome_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF10">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA TYPE-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00854">
        <property type="entry name" value="PROTEASOME_BETA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2 4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="22662" checksum="0CF16AA237964D68" modified="2025-10-08" version="1">MSIDSYNGTGVVAMRGKDCVVIASDKRFGIEHFAVSSSMHKTFRINEKCLLALSGLPTDVQTVKQETDYNVGLYELRQGVTMSPDTLSGLISGLLYQKRFGPWYVSPVIAGISNDGAPFLDSMDCIGSRHEEKTIPFVVAGTCSDQLYGMCESLYRPDLPADELFEVVSQCLLSAVDRDPISGWGAEAFIMTKNSLVRKDLKTRQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI06</accession>
    <name>A0ABV2AI06_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001161</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000252">
        <property type="protein sequence ID" value="MES1919306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12144" checksum="29AD097F7881DC28" modified="2025-10-08" version="1">MPETGFFSIEKEEIYRNNPVLLQIRKAEIMNKQKIPNILKFLNKNLPLCFAGHYKRIFASAEKRIFILLCSLETKLDDQILAKLKEFEVNLETSAIIVFNPFLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA2</accession>
    <name>A0ABV2AIA2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000969</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000199">
        <property type="protein sequence ID" value="MES1919103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="10389" checksum="D43EFE583C53C49D" modified="2025-10-08" version="1">MVKELLHRKKTSSEETHRLVEEFKTLYLQKKDVDMQQKQRIIFSDKGVFEQWTYNRQMIHKNFSKAVNLQLLDEILAEERSARLGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AID1</accession>
    <name>A0ABV2AID1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001062</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000224">
        <property type="protein sequence ID" value="MES1919199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045414352" evidence="1">
        <location>
            <begin position="24"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15346" checksum="DE54C0A45185B58F" modified="2025-10-08" version="1">MKLLYILLLMVNLQIYFVRLAVSDETDFDDVSAMDQNELKKMLKKRKKSFVQKMAYKRKPEIGDINDFEYRNDVKTTPDSDLSDVKTISEDEKDSVIEENDKQHKLFNSPSYIKRALDEENALNDQIKYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII4</accession>
    <name>A0ABV2AII4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001310</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000306">
        <property type="protein sequence ID" value="MES1919486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057634">
        <property type="entry name" value="PAH_ZNF598/HEL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056437">
        <property type="entry name" value="Znf-C2H2_ZNF598/HEL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044288">
        <property type="entry name" value="ZNF598/HEL2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22938:SF0">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE ZNF598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22938">
        <property type="entry name" value="ZINC FINGER PROTEIN 598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23202">
        <property type="entry name" value="PAH_ZNF598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23230">
        <property type="entry name" value="zf-C2H2_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ZNF598/HEL2 C2H2 zinc finger" evidence="3">
        <location>
            <begin position="10"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="ZNF598/HEL2 PAH" evidence="2">
        <location>
            <begin position="232"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="344"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="495" mass="57583" checksum="AE1B1D81962C0BE8" modified="2025-10-08" version="1">MCQFCRTQGRHVYEANREGIKEHYRKSHFMCEAPECVAEGFAVFANAIDLNDHYIHFHGKEISAAELEQIKENSGYISLRDNQEPTQFTINRRNTRETFVPNSTSGNKNHPISFINTLISFPELPRTRVPVAKVSPEAKKRVNTKISDKIGGKINSISFPPLPKSNLAQNIKTETKKTRSKTDIYLDRLIKGGNESTKKIANSKKFAKIKRFDMFDENKPKPIPFSYEQLPERHANLHKRLKQLGGSAKFKKFRELYFKFTAENLPAEDFCYKYLSVFGVNEHSMISLYEIVRLITIESKSDKLYKVCLKTDFSKFTKKNIIKYNKSKSSDIFLKDKFLQKDEKIEKQEKIDNLKKSLEDLDLKEEIIERIDIENLYSRKLQNFDVNKNQSFFKILAKFFAMELIVRLKNNQIFPSEDKLKKLQEEAIIFSNFIKKENGGSSPNLLAVRKLDSFKALRKSTAENVAGVVDIYRQKKSSSFWLKHSVELDFLKIDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJH6</accession>
    <name>A0ABV2AJH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000409">
        <property type="protein sequence ID" value="MES1919815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013893">
        <property type="entry name" value="RNase_P_Rpp40"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08584">
        <property type="entry name" value="Ribonuc_P_40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="282" mass="32705" checksum="B8879F6A7CD40EE5" modified="2025-10-08" version="1">MAALFDNAINMQQRIGIWKSSVHDLKSRHIETLKSIDFFKSVKIQLVSKQNRKISSADVQAFKGKINSILETFSNAFLCYKSNPSDLLTNLHSVKSAIFHSNLDTDASFCLKNNKIFIKMDDNLYYRFGLEAKKSSYKQQRQNKFFRIDLNSSKRAQNQKLENGLKTCFPIGRMTVFSKYGDSYQDSPFFNKETIAKINAKMSHQNFENIPFYFQIENLGNFAELDNLNCQSLLEWTANVTSKNDFMSDLEIKDFVNVDLFCTYQNFDTDALQHIFTECLFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN3</accession>
    <name>A0ABV2AJN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001627</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000429">
        <property type="protein sequence ID" value="MES1919875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10163" checksum="53093C0F347C1D60" modified="2025-10-08" version="1">MIFLSFIVVAMAENILMDSCNIKDSIYYLATQVNVDGNNGDSVQFSINIVKSGNLKVFIFDGKLNFGPVQALCRQPNFWENKVEVVESFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN4</accession>
    <name>A0ABV2AJN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001632</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000431">
        <property type="protein sequence ID" value="MES1919880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="392" mass="46975" checksum="5176DE8D7DD525BA" modified="2025-10-08" version="1">MLQSKFEHTINATYFCLTLWADLLTDVSMEIYSNVESNSIISYNFLMPKIIKLTKFYNSADITTKTSLKTAFILICFIVFYQFFAIKKKINRFLLRFFLLFKQKFIYLRKFVCDFLYFAISITLLFQNRPNFNLLASKNFSFVIYLFLSGLSLFVLKKKKKILKKWSNFLFYGSIFNFLQFFKFWRRFFVLKNLLLIWIIAPNLNGQNLSFDFMIFVIKKFFPFFYYATNTKTKRKKVRSKRKYLIKAYNVVLSTIERSSDVLLKKFDKYKTISDFIKNGAIQLLLMIMFSFSMGFFSKIGYFLISLIYPFHRSILAILNNEEKSNEKEEQKWVKYWTSNCLIKICQIFLEKLNLNSFPGVTNLLMWTCFWLQFDGPYCRGAEKVCDFLINF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJP0</accession>
    <name>A0ABV2AJP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001631</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000430">
        <property type="protein sequence ID" value="MES1919879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="19670" checksum="4E623AB73717C3ED" modified="2025-10-08" version="1">MFNISTDRANEIKDSIVKKEDDLATKIKHKLFPSSRKLFYFVDEKEGNLVLKTFVNGKESEEEIENKIKNELEKIDENIFAEKIKKVKNGEYSINVSSITNMSIDAMKNKILSYDRILNHISYYKKIENKNNETKWTEKFFKIKKSSFEIKDYDDNYNYCFLFKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ4</accession>
    <name>A0ABV2AJQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001656</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000441">
        <property type="protein sequence ID" value="MES1919911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="253" mass="30069" checksum="3CC9F26879C63BD0" modified="2025-10-08" version="1">MCMMNIGTLDVNEINDKRFCNKKPKLLKLRHLLRRLTFKTKKSKKDTDSIEESRKESTQLSFTQSLKLKIKNFGHRKKNQLTNIDIIGDDQKDVRNEIKNGIENDKKDVRNEIKNGIENDKKDVRKEIKNDIENDKNNFKEKINKNLEIIYFNGPFSAEKKRFDNEEKVSFVVTENVSKNLIKLEKFEMKEFKIETVNITEEKRQIAKTAENNFFETNEKEHWKIELEKKLKKINKYVRYESFSCGSNSSFSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK55</accession>
    <name>A0ABV2AK55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Reverse transcriptase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001782</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000496">
        <property type="protein sequence ID" value="MES1920057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051083">
        <property type="entry name" value="GrpII_Intron_Splice-Mob/Def"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000477">
        <property type="entry name" value="RT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34047">
        <property type="entry name" value="NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34047:SF8">
        <property type="entry name" value="PROTEIN YKFC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00078">
        <property type="entry name" value="RVT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50878">
        <property type="entry name" value="RT_POL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Reverse transcriptase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="28693" checksum="4AC36DF1D6BB366C" modified="2025-10-08" version="1">MIKNILDKINKIEIVKIYNEKSMTRENAIIQFERAIFANTIKFTSKKSGKLSQNWYTKTKGVLQGSILAPILANLYLQNLDKNALKFSQIKYYRSVDDMICFANGENILNQFLKFILKYLKSLKLEINEKSKFYQLKNEQTINWCGYSIQNLNNKNRLLIRKNYKSKFSLNPNLANMTKINDNSRKILENLAKKFFMFKKNLRFQHKPFLKKILRMLLIKVLKKVCEEDLLKMAQISVKWIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF0</accession>
    <name>A0ABV2AKF0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RGS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001866</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000534">
        <property type="protein sequence ID" value="MES1920160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="190"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="219"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="446" mass="52040" checksum="93402710AD8A3FB7" modified="2025-10-08" version="1">MFYLDINNRALPSTLIWSIIITVGVLSLVILTILHLRIREQEEILRMRPVNFLITSLLLVTITLIITGLKKFIFHISYDTIYNNTLFMCVSFFYLFFYDTVVFLLSKSENSFDGMVFIIKKHTKFRKIMIISMYAFTFAGIIEKVVCFYTEWIFLNIVFLLEFATFLLIFVIITINLAKHRSDTVGLKSQISYLGVSTILFPIFHYITNLNIYMDTVPFIALLVGGSFLEISMAHMVGLIQIGYPYFLVMRDKYNKPDADTETNTEVEENGTSSLRHLLTNTLFIKYFTLYLDLEYSVHHMHFYMHVTRLINLIESTLAEGNLTEEGTSRIMEEMITLIRKYIGDEDSRINESNISNMFGGHEGGAQEAVNITNKLKTRLRQVKDRLEKPSFFELLNPKFQRDIIETIKSELIESEKQTFCMLRSSRRRYMKHPLYKEYLEAAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX5</accession>
    <name>A0ABV2AKX5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8">Thymidine kinase</fullName>
            <ecNumber evidence="2 8">2.7.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002011</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>thymidine + ATP = dTMP + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19129"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17748"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.21"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the thymidine kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.21" evidence="2 8"/>
    <dbReference type="EMBL" id="JBDODL010000613">
        <property type="protein sequence ID" value="MES1920331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.60.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001267">
        <property type="entry name" value="Thymidine_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020633">
        <property type="entry name" value="Thymidine_kinase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11441">
        <property type="entry name" value="THYMIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11441:SF0">
        <property type="entry name" value="THYMIDINE KINASE, CYTOSOLIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00265">
        <property type="entry name" value="TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035805">
        <property type="entry name" value="TK_cell"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00603">
        <property type="entry name" value="TK_CELLULAR_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8" id="KW-0237">DNA synthesis</keyword>
    <keyword evidence="6 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="22544" checksum="CE1763979B426A67" modified="2025-10-08" version="1">MTIKPKDQLFGHVELILGPMFSGKTTELFRRIRRYTFANLQCYLIKYKNDNRYSSVASTHDKIRLEAVSCTNLGEAEKSSAGYDVIGIDEGQFFPDIVEFCQKMAENGKIVVVSALNGTYQRKPFDVISRLVPISEKMTKLSAICMVCYGEAHFTKRTVSSNKLELIGGSEFYIATCRKCFNLENDKIKNIKSPSMFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB2</accession>
    <name>A0ABV2ALB2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002123</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000681">
        <property type="protein sequence ID" value="MES1920458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00180">
        <property type="entry name" value="PKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24345">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE PLK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="40"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="335" mass="38915" checksum="9F25E0A8242F7070" modified="2025-10-08" version="1">MGAINSKLSWGKVLKISKEDLEETKCCFGANGHDGCTENFTITKVIKKTKLMSVYKVVSQKNKHLAVKIVKKGKRDEYTENEIAILAKLNGLHKNIVKCKHVFETNKYYVIFEEFLIFDIRKYLKKEKRMTLDAGRVFIRKVTKIIRFLHQNNIVYGDLKTENIMVDEKGNIRLVDFDLSIRLDHNYTEDFQPLGTVYYTAPEQVVGKTCKQSDWWGLGCLLCEIYMSLTANEMLFLNRSEYVNQDAAIIALQQLDEDLKLEDEDPLMQPALPFINECVKLKVEDRIDLDKAQNLGEVEFLKDVTAAHKNEFVDEMKRFANNVIRKEQKAFLMLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD5</accession>
    <name>A0ABV2ALD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002154</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000700">
        <property type="protein sequence ID" value="MES1920490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="48"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18816" checksum="FCAC82B7D266FD3A" modified="2025-10-08" version="1">MLEYNGKKFFSDSGEDSSDQKTPKETKPIPNNGKPLQKPIAENNFGEKIVKINREKDDQNIQKSTEKSKFLEPEKKSETAKTNIPLKEVLTEYHKYAKKQLILAKETKDAVSFRELRDLVHSYESGILLLDNEIDLDEPMNVKDFADPFKFDVFIFGLLLFVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY3</accession>
    <name>A0ABV2ALY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CDK-activating kinase assembly factor MAT1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MNAT1</name>
        <name evidence="2" type="ORF">MHBO_002080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000654">
        <property type="protein sequence ID" value="MES1920408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="131"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="26074" checksum="1C10AA0CFA92C7A8" modified="2025-10-08" version="1">MEHNLLWDKDFFEISNNCPECKLTKRNFKSLKLYYSNCCGLTLCLGCINENFSKKSDFRCKNCTKKLKKTDFVKDPFFRQKYYEQINSRKKLNFLSILEKEDFDDGKEFFDYYNKIAKILNMLTTGTTETQEKAKRQILELKENYSKLISRRKKENEENSVRLIEKSSNDIQFVAHSFKFPTIVKKDKNKKQKIVCFAGGFKKEYVEKKKLWNFRIGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB3</accession>
    <name>A0ABV2AMB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002441</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000875">
        <property type="protein sequence ID" value="MES1920806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12754" checksum="345E63D07071C750" modified="2025-10-08" version="1">MDRAQRVLQNASQSLFKDSSSESLGPYLDDESLLRVGDAIFTRDISARSHGPIISPIKLYVAYLLLKHHLGNASTKGTTLHKAQVDFEDMKFWVARELYHQYWALVSSLVSTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ3</accession>
    <name>A0ABV2AMJ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002484</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000915">
        <property type="protein sequence ID" value="MES1920862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045610882" evidence="1">
        <location>
            <begin position="19"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15925" checksum="FCA7571FF2875AC1" modified="2025-10-08" version="1">MKHLLIIVFVIEASFVQYEEPYDAHPWTYGSEIEAQDAETVCNNMNKRICNKDDLEAFYQQNRSICKKAWAYNRETKDIFGHVVSVNSSCFENDFINGVFPQRIFTQRTYDRFWCLIPKEDFENTFGFILLLRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK4</accession>
    <name>A0ABV2AMK4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002495</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000924">
        <property type="protein sequence ID" value="MES1920877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050352">
        <property type="entry name" value="ABCG_transporters"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041">
        <property type="entry name" value="ABC TRANSPORTER G FAMILY MEMBER 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041:SF139">
        <property type="entry name" value="PROTEIN SCARLET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="39"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="22355" checksum="AD0495426CA4C64D" modified="2025-10-08" version="1">MSEQSIKYSLKSDKSKKVRLSFKGLKYSVKVKKSNKIILDDINGEVCSGEVLAILGASGAGKSSFVNMLTGRVPSNVSAEGEILLNGEKVSFSNLKDITGYVLQEDLMFSHQTVQETIRFSAVLRCPSHFTQKDCDEKSEEVMRHLGLITVKDTKIGNEFQRGISGGEKKRVSIAVECVRDLSILYLDEVFWPNLKIANDGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW7</accession>
    <name>A0ABV2AMW7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001022">
        <property type="protein sequence ID" value="MES1921016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9848" checksum="5AAD70E6A4FA949F" modified="2025-10-08" version="1" fragment="single">MTIIFVHSEKFEDKLKSDVNPSVFYIEPDIQRAKFDSRAAKKGDQSGFYSKPEKVTYYDNAEKIENAFKEHEASEYVENIENDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN08</accession>
    <name>A0ABV2AN08_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">rRNA adenine N(6)-methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">DIMT1</name>
        <name evidence="9" type="ORF">MHBO_002654</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010001056">
        <property type="protein sequence ID" value="MES1921056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052909">
        <property type="term" value="F:18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00607">
        <property type="entry name" value="16SrRNA_methyltr_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001737">
        <property type="entry name" value="KsgA/Erm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020596">
        <property type="entry name" value="rRNA_Ade_Mease_Trfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020598">
        <property type="entry name" value="rRNA_Ade_methylase_Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011530">
        <property type="entry name" value="rRNA_adenine_dimethylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00755">
        <property type="entry name" value="ksgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727">
        <property type="entry name" value="DIMETHYLADENOSINE TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727:SF7">
        <property type="entry name" value="DIMETHYLADENOSINE TRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00398">
        <property type="entry name" value="RrnaAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00650">
        <property type="entry name" value="rADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01131">
        <property type="entry name" value="RRNA_A_DIMETH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51689">
        <property type="entry name" value="SAM_RNA_A_N6_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 7" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4 6 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Ribosomal RNA adenine methylase transferase N-terminal" evidence="8">
        <location>
            <begin position="33"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="26"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="322" mass="37222" checksum="180152EE6CF09701" modified="2025-10-08" version="1">MVEKIKKVAIHLSKSKILFDKNKGQHILQSKKTIQKIVDKAGIFPSDIVLEIGPGTGNLTLPLLQKAKKVIAVEIDKRLILELKKRFIGTEYNKKLEIINGDALKTDFPFFNILVANIPYQISSPLIQKLLDLGPKFRCAVIMFQKEFADRLVAKPGDKNYSRLTVNTQMFTRIDHLLKVGKALFKPPPKVDSSVVRIEPKRPYPKIDKSQWKNMLLICFHRKNKTIGAAFRTKSHLKQLEKFHNAHCLENKTVFLIIFNTILNPFSKKTPFEEFKSSLDEFLIREGYSSRRSAKMSCDDYVVFLNKLNKNKFYLSYPFLYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN24</accession>
    <name>A0ABV2AN24_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">E2 ubiquitin-conjugating enzyme</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002659</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001059">
        <property type="protein sequence ID" value="MES1921061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23800">
        <property type="entry name" value="UBCc_UBE2K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24068">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="8">
        <location>
            <begin position="1"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="UBA" evidence="7">
        <location>
            <begin position="151"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="5">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="190" mass="21946" checksum="C6AC8956B13460F3" modified="2025-10-08" version="1">MSDKRIEKEYDEIKVDKTGGFQIKKKGLKHYQCRLDGPMDSPYQEGHFFIDIKIPVNYPFSPPLMQFITKIWHPNISSVTGAICLDILKSEWTPALTIRTALLSIQALLSAPEPNDPQDAMVAQQYKSNYREFEKKAKNWVETFAKVKDFAADKEVKEVQKLMEMGFDRELALSTLEKNDWDVQKSLEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN56</accession>
    <name>A0ABV2AN56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002685</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001081">
        <property type="protein sequence ID" value="MES1921100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05356">
        <property type="entry name" value="17beta-HSD1_like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051019">
        <property type="entry name" value="VLCFA-Steroid_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43899">
        <property type="entry name" value="RH59310P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43899:SF13">
        <property type="entry name" value="RH59310P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000126">
        <property type="entry name" value="11-beta-HSD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="31206" checksum="DAC104C4AEF29F2A" modified="2025-10-08" version="1" fragment="single">KIEVRKIYKKWAIVTGSTDGVGKALAFELAKRDFNLLLLSRTRSKLEKTKAEIESFAKKVQVRIKVVDFSSFGESEAKDLLEFVEPFKNDIGILINNVGIAYSRPDYYHGIEKCQRDSLMAINVNSTKEMIDLFLPVMLQNETSEGQRKGAIINMSSVSSKLPGSFVSLYSASKAFIDQLTRGLYHEYKLLGIDFQAQRPCFISTNLSKLEKSFFVCSPTEYAEASMKCIGYGCDEIPYWTHKLQMMLTGLLPNYLFDALYNYGINDLRKKTANK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANA3</accession>
    <name>A0ABV2ANA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002717</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001105">
        <property type="protein sequence ID" value="MES1921141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21976" checksum="1C9EDAB8783A8477" modified="2025-10-08" version="1">MLLIRLSDNALYKDNDSSTPEDIVEKFLRKIDGSKFKLKELKNFEYEYFNEKPHLDKKSIIRLYKGFGMYSGLLKMCGEFGLEMNFAFNAIKLLFGLVDIEKNKDAKFYLETLCSLPENNLREMNIHEHILSERGTKIIAFKLISLIKPFKNNFLETCVSDFWCRKLYSRWQEVQQNKNKTNIRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANC7</accession>
    <name>A0ABV2ANC7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cyclin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002457</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000893">
        <property type="protein sequence ID" value="MES1920827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043198">
        <property type="entry name" value="Cyclin/Ssn8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10026">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="255" mass="30233" checksum="9DC1C7B918F47841" modified="2025-10-08" version="1">MLKKFDQDCPTEFWERTPSRKDGITELKELEMRQKVCRFMLTMLRAMKIEDHFAEIHAFMLIQIFYNRFSFANSSIDKYDLGLAAVFLSLKLNDRTKTLTELILNQWKYLSPNVPLPTGTTKAFKERLKCILFTEMKLISTINFRLEYPNHLIYGNKIVDHFFPALFKENPKIYKNLVKLYYFLSYHSFWTHLGLFHGPFDVAFACLKQAVLELKQQHKIVLKFSRRILDENGIDSEKIIKIQKILREKGQVMTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX2</accession>
    <name>A0ABV2ANX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002906</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001289">
        <property type="protein sequence ID" value="MES1921372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7287" checksum="A8075A555AAE2A1C" modified="2025-10-08" version="1">MQRKHFSFKRHENFKMSMKRIGAMTHDPLKKITLLCGQKSRHTPFHICRGAMAVLFDDPRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX4</accession>
    <name>A0ABV2ANX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002736</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001119">
        <property type="protein sequence ID" value="MES1921164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17411" checksum="0784EB27934B685A" modified="2025-10-08" version="1">MTKPKKVPDGWVFFPCVDSPGHDIIQTTATNTAILAKRCLNRKAVAFNSNGWIKRKIENRKKWYKWTDDETEGLYVLNSALKSSEKILIKKSSEKTFPKKAKKAKFSSKISPKKSRKKIKKLEISSKVYSFILVKRNNSKQNVSRSNNNFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP62</accession>
    <name>A0ABV2AP62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001100">
        <property type="protein sequence ID" value="MES1921127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="505"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="505" mass="57358" checksum="5A270D072B30CCFF" modified="2025-10-08" version="1" fragment="single">IKVMKNYYMQKNNFILIKELPDDPYLDDSQNLFINKPPSTIKLTHSVTDSFDFDPKDNPKTFYINLISLMLRETKRFYPSNDFSEPKSIPKMLYNGDCLLRSILRIDFDKNSSDFAKSAPGISEAFESPENDDLGNLRICLEPSSSKKAAGKNILHYLHLGITENIKTLFGLCVYVFGVYYEGNLDRRRYLTQIVPITKELLNNASFGISAVDDYIIPLVFLLVSEETEELRSFGCGLIGAVSQCLFEYSKTHKNQKAVDSVKDFLAPILITSINDESQQVFKSCMNSLELMSFYFSPSEINMLVLPLVAANCANGRNVKAIKILERIAFKVDPENEILSLATACETLSFKGNAVKKVLAKNFFCFYRCVKNGVPPNDFNADKMLEIFKKFVSDKNWKIRIASLQSFTEIAAVAKAEHKIELLKMYQVLLIDDYCYVKEDAATIFGRFVCLYDSENVFIAKTKIDGTLIEIYVGFLSSENRELVRICTLDFYSSLFLILVVVATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP64</accession>
    <name>A0ABV2AP64_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Amine oxidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002794</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001176">
        <property type="protein sequence ID" value="MES1921236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050464">
        <property type="entry name" value="Zeta_carotene_desat/Oxidored"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42923">
        <property type="entry name" value="PROTOPORPHYRINOGEN OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42923:SF3">
        <property type="entry name" value="PROTOPORPHYRINOGEN OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54373">
        <property type="entry name" value="FAD-linked reductases, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amine oxidase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="30768" checksum="C94FAB91ACDE24D8" modified="2025-10-08" version="1">MYSLEGGVSQISESILSRLSKKGVNFITSEKVDCLNLGKIGENFQIVTQNKKLRTFDVVVSAVASSDLAKILRNSKKNCKNLLQNLKKIETTPILTTNIVIKNKKKCRFLDSFGFLVPHNANKPLLGATFDSNAFPNFDESEEMRFTVMSGGFRHRNDDVVRKIAFSKSRKEKIWAEKVHNFRILLFIKQILRSEKDFENDLVLMKTRSFDFPQYNVGHEKTVKSIERNLEHFPSLFVSGWSYKGLSVNSCIKNSIKTSRQIVDSIKTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP79</accession>
    <name>A0ABV2AP79_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001408">
        <property type="protein sequence ID" value="MES1921486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23628" checksum="2EB3B66681E68753" modified="2025-10-08" version="1">MMSMNTKSDEKASSRIKRRQVRKSKENSPKKEKPKPLTKKPETKKLEKSEAPNKLEKRNVALKVRKQAEKTNPQIAVNKKDDEEIKKLKEQLKLLKKVESDLIKEVELEKAKTKKAEREAAELRSDMTKRIEQIADLEMKLGNIGDGNEEELKIELEKQHKRARKARKKAKNLEKELRHSEEIINKQAENIKSLFKRISELGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK6</accession>
    <name>A0ABV2APK6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">ATPase AAA-type core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002917</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001298">
        <property type="protein sequence ID" value="MES1921386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050168">
        <property type="entry name" value="AAA_ATPase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23077">
        <property type="entry name" value="AAA-FAMILY ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23077:SF171">
        <property type="entry name" value="NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase AAA-type core" evidence="4">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="AAA ATPase AAA+ lid" evidence="5">
        <location>
            <begin position="70"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="160" mass="18202" checksum="F85C2A2019812E03" modified="2025-10-08" version="1">MDGLEDRKGVFIIAATNRPDLIDEAILRPGRLGRTIYVPLPDKNARKNILEKHLLNIPCRNKEKISKIYSEKCDGYSGADCAALVKNASSKALSDFFDNFSQKADLNFAIKNKLTLLNGVEVLEKHFDFALLNLRRSVSEEKEKFYTKLNNKFNKIFCSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM5</accession>
    <name>A0ABV2APM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003157</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001568">
        <property type="protein sequence ID" value="MES1921630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="19"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10569" checksum="117E19D675422ED4" modified="2025-10-08" version="1">MEKLTSNGKAPDQNLCSQLREATIILAKLEKSVEDEEIDLDGYLKSVRKSVKNLEILAQFLETENRPELEEVLRRLVVMKKELETAKTQLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV5</accession>
    <name>A0ABV2APV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HNH homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003241</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001661">
        <property type="protein sequence ID" value="MES1921711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="210" mass="24844" checksum="B7C711E2610DDC84" modified="2025-10-08" version="1">MSSLFDNIINRVSKNNKKHRTQKVLDKRTFCRGCGFHVLKKTYKIHKKLFRNSDGIWLPHNMQPSRQKINKPLNLLKSEEMDKIKKMGKIKNAEKRQKSKKIYKNFCAFCGNCCIDGECKFDDKNFFEEQILHFCCLFAQNSNFLDQIILHNKCEYCQNEHFHVFLEKNRFSFASKNRRRNRTAPIALPSFTASKIAKSKKSKHFTQSPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ07</accession>
    <name>A0ABV2AQ07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003151</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001564">
        <property type="protein sequence ID" value="MES1921624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12726" checksum="64B7C98EE6265396" modified="2025-10-08" version="1">MSENNDDLDESENESERNLIKEEILGGVLERKNKLLNEQLLQSNLDAKLALIRSRKRRSESGLNDKDLHLEFVLRFFELKEKKKDEKLKKLEEDLRRAEIKLNSFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQB4</accession>
    <name>A0ABV2AQB4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003188</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001597">
        <property type="protein sequence ID" value="MES1921659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="293"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="36766" checksum="87DDD33241A4C7D1" modified="2025-10-08" version="1" fragment="single">NGQNKKIDKNLNENDENFNKNGQNKKIDKNLNGNYENFNKNGENGQNKKIDKNLNENVENFNKNGQNKKNDKNLNENDENFNKNGENGQNKKIDKNLNENDENSKKLNINKNLYISVDTDNLGEDLDISGSTVETIITELKILIDEKSTEQSCFHCYGQIHSVVSIGLLKNIDEIEDDCGILKFILENGRKTNGRYKSKITRILNTLRIDLLSFQRFLLSLKANHKINLKWERKTMFIKFDFGLKIKIGQMAKLIKRKLDDFENRQLMKKIIFGQSLKLIALRNFSNNEDHRFLLFFIVTKFCFFFITNLDFRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC8</accession>
    <name>A0ABV2AQC8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="7">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">prh1</name>
        <name evidence="7" type="ORF">MHBO_003273</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DEAD box helicase family. DEAH subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010001705">
        <property type="protein sequence ID" value="MES1921744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002464">
        <property type="entry name" value="DNA/RNA_helicase_DEAH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF99">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX37-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00690">
        <property type="entry name" value="DEAH_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="17"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20118" checksum="C8A5C5F9551E78A9" modified="2025-10-08" version="1">MKSQSHLPIFKNKNEIIAKIQKSQCTIIVSETGSGKTTQIPQFLYEKGLSSNGIIAITQPRRVAAVTVASRVASEMKSALGEKVGYKIRFEDTTSSQTKIQFMTDGMLVRDYMADSSLKKYSVVIIDEAHERTLNTEILFALIKKLMEKRKDLKIIIMSATLSIDKFAKFITKILSFCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ9</accession>
    <name>A0ABV2AQJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003275</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001708">
        <property type="protein sequence ID" value="MES1921746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046632239" evidence="2">
        <location>
            <begin position="16"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="441"/>
            <end position="463"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="464" mass="52212" checksum="247606A3B73C3E33" modified="2025-10-08" version="1">MIFLRIMAILNIACTLRIPNISRDFAYKKASENFGVARELWLLKGFKQVEDADQNFEFSLLLKCNQFDKIIKINANGNELLVDYLVFTHKIGKLESPYGDDIDMSCVGSNKIKKCISILNKSDLEEWKSSNPFHCKLPNRYESPFYKADFSRFVKNNHTAFSGCQTVDASLIETMHCRNGTINYKNCQDSKKHKYCGLDKLSPALNPNKLKWSIPTNVFMGVECEAKAKFYGVVTCKDNGEFRYSKNVPITCEVCNEMYIARMKRGSWIQTNDSHLSAYAPYSCPDNCESNSKGVIGCGERGWILKNGCNCYCRGIGKAIPGIQKKSKERRTNEGELLSLSCVDGSEVVGYYKCYDSEFIGDPYCNSTCNEEPQVENKMATNCTGKSVGQVCEMECIDKNFEFQGTFPVCTRSNNWFVENSHCVGKKVVTELWSINEFKGLYLSLSVGGLALVSGAAFASAYFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK1</accession>
    <name>A0ABV2AQK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001740">
        <property type="protein sequence ID" value="MES1921764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13009" checksum="27C7F31F03725671" modified="2025-10-08" version="1">MKIQLIWFDLTGMMYTFCLLKVFLPTGTSVKISIYESREWLTSTTSTTLWYINVEIYPTIADTNSTSGLCGFQDNNQTNDLRWKDGTESDISLYDYFKTHPNDFAKSWGYVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK2</accession>
    <name>A0ABV2AQK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Nuclear cap-binding protein subunit 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">20 kDa nuclear cap-binding protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">NCBP2</name>
        <name evidence="11" type="ORF">MHBO_003471</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the RRM NCBP2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001976">
        <property type="protein sequence ID" value="MES1921945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12240">
        <property type="entry name" value="RRM_NCBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027157">
        <property type="entry name" value="NCBP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034148">
        <property type="entry name" value="NCBP2_RRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18847">
        <property type="entry name" value="20 KD NUCLEAR CAP BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18847:SF0">
        <property type="entry name" value="NUCLEAR CAP-BINDING PROTEIN SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5 8" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 8" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="10">
        <location>
            <begin position="38"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="113"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="113"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="131"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20438" checksum="8E9377381D6C98A7" modified="2025-10-08" version="1">MSFLYSNPNALSPYLKSRKNLYSEEGWNKIVERLQSSCTLYIGNLSFTTTEEQLYALFSKIASVKRVILGKNRFNGKACGFCFVDYYTPEDTKSALKYLNNMKLDGKTIRVDQDPGFEEGRQFGRGKHGGQVREEHRTDYDSKRGGWGHGDTYRPKRKRNFNSGGKRPQYKERKYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR09</accession>
    <name>A0ABV2AR09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003627</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002236">
        <property type="protein sequence ID" value="MES1922112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30341" checksum="B7E4ACD27E503442" modified="2025-10-08" version="1">MSLVPYSDSDDSEEHPKVAEKQKKLNFSLLPKPKKVKNNKPKKSKIRKRAINSKQNDVKNSISPFEQKKHFGNFRIKNLHKKENSRIKNFDKKENFKMGSFLIPNSDDESDHSSPRKKYELDKFQYKNDQINENPKSSQKFGDLLKQNDFLDFIPPDKNVLNEVKQNPNLITITPNEYSKIENSPNKLLSAIFRNAENATVTIPSQNVSSIHKRKHQVYYKNFKITSLAFDAQNAHFSLQQEKTKRMLNRRETKAKYGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR65</accession>
    <name>A0ABV2AR65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003383</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001850">
        <property type="protein sequence ID" value="MES1921847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="335" mass="39753" checksum="64B4E668ED790750" modified="2025-10-08" version="1">MSVSPNDRELILTNLGKYHRNEPLFDRIRFRLFKRPDLTLSSEKIKEQVEIFERDKLFSTENRKEKKSFKAHFKFFLTVTTLLSAAAYFVITILAKNRERNKVTQIFAYDREEVIDLERKTGFGMDDLVEIENESKKLPKKICGFVNVEDFIGIAERIAEKRNKNVRKCDFLCLYRKSEYRIEENGELFAPLKELLSGLSILATEKDEKLKFVFKLHSNARNQNVDENEIDCKNLEILFEKLLRLRHFYADSLLCKEKRFPLPKYRPFTPHEMALAVFRQHKLNLGISDESDLNSHINNSFISFMDFKQVCSTLKSKKFGKTKFEFWYFDPNNKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN6</accession>
    <name>A0ABV2ARN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ras-related protein Rab2BV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RAB2BV</name>
        <name evidence="2" type="ORF">MHBO_003543</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the small GTPase superfamily. Rab family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002101">
        <property type="protein sequence ID" value="MES1922027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050209">
        <property type="entry name" value="Rab_GTPases_membrane_traffic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47979">
        <property type="entry name" value="DRAB11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15363" checksum="1B346508D1257657" modified="2025-10-08" version="1">MPSEYDYLYKIVLIGDSGVGKTNIISRFHHNEFSKEFKTTIGVEFSSKTVQLNGKKIKAQIWDTAGQERYRAITAAYYRGAKGAFIVFDISSKQSFDNVAKWHEELVNASQDKIGFEVVICRNNVGWKQVRFEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART4</accession>
    <name>A0ABV2ART4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Vacuolar protein sorting-associated protein 45</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">VPS45_1</name>
        <name evidence="2" type="ORF">MHBO_003889</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the STXBP/unc-18/SEC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002699">
        <property type="protein sequence ID" value="MES1922382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.830.10">
        <property type="entry name" value="Syntaxin Binding Protein 1, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043127">
        <property type="entry name" value="Sec-1-like_dom3a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001619">
        <property type="entry name" value="Sec1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027482">
        <property type="entry name" value="Sec1-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036045">
        <property type="entry name" value="Sec1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11679">
        <property type="entry name" value="VESICLE PROTEIN SORTING-ASSOCIATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00995">
        <property type="entry name" value="Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56815">
        <property type="entry name" value="Sec1/munc18-like (SM) proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="31092" checksum="1EC8D03F1B10742C" modified="2025-10-08" version="1">MGKLAEIDVNETVLSANTFPLNFCPLNSNLFVSNAFPENPFDVFNVSLLPPSIVFEKDVEAIISALSLFEMSPTIRYSAFSEESMLLATEIQSELSKSTAVESSSNSNKDGIVLIIDRRIDPLTPLLFPWSYQAMVHEIFGIVKDKITVLDKQKTRQFVFNDREDPFFAKNKDLNFSQIGIKAKNLVLNFSSSARKSQKMDSIDQLEHFIENSPDILEKSDLVVRHVKILSELSRSVKNRKLMDVSALEQEIACGTNVKSEVIFEVFGCFKIIWH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW8</accession>
    <name>A0ABV2ARW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arf GTPase arl1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ARL1</name>
        <name evidence="4" type="ORF">MHBO_003663</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the small GTPase superfamily. Arf family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002282">
        <property type="protein sequence ID" value="MES1922148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024156">
        <property type="entry name" value="Small_GTPase_ARF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006689">
        <property type="entry name" value="Small_GTPase_ARF/SAR"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11711">
        <property type="entry name" value="ADP RIBOSYLATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00025">
        <property type="entry name" value="Arf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00328">
        <property type="entry name" value="SAR1GTPBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00178">
        <property type="entry name" value="SAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="19597" checksum="429312B9825855A5" modified="2025-10-08" version="1">MGSLLSNIFKYFQSDKDVRVLILGLDNAGKTTILYKLKTPEASTKIHEPTIGFNVETFRVWDLGGQTNIRPYWKCYFQDAIAVIFVVDSTDVERLDLARQELLSVVSEEEMANIHLLVFANKQDMETSISEEKVAEGLGLSKLKNDKCKIFKTSATKGEGLKEGFDWLIKQIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY0</accession>
    <name>A0ABV2ARY0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pyruvate dehydrogenase E1 component subunit beta</fullName>
            <ecNumber evidence="4">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PDB1</name>
        <name evidence="6" type="ORF">MHBO_003944</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>N(6)-[(R)-lipoyl]-L-lysyl-[protein] + pyruvate + H(+) = N(6)-[(R)-S(8)-acetyldihydrolipoyl]-L-lysyl-[protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10478"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010002785">
        <property type="protein sequence ID" value="MES1922431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07036">
        <property type="entry name" value="TPP_PYR_E1-PDHc-beta_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027110">
        <property type="entry name" value="PDHB_mito-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11624">
        <property type="entry name" value="DEHYDROGENASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11624:SF96">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 6" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Transketolase-like pyrimidine-binding" evidence="5">
        <location>
            <begin position="28"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="16617" checksum="5B2E2CBEAF734AA1" modified="2025-10-08" version="1">MLKNLTKKMLKNNKTKFGFSRYFSSKEMTVRAALNSSIREEMERDENVFVIGEEVADYNGAYKITQGLLDRFSDKRVLDTPITEMGFTGISVGAAMNGLRPICEFMSFNFSLQAIDQIVNSAAKACYMTGGATKVPVVFRGPNGAAKGVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS16</accession>
    <name>A0ABV2AS16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003706</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002371">
        <property type="protein sequence ID" value="MES1922193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="48"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="87"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15323" checksum="C7D3C357C4E44520" modified="2025-10-08" version="1" fragment="single">IERYSNLISDYQKEYENIKNKILDEKTSNQNLAFPTVLFIEKDKNEHSNPIEENLDSKTSLKNKTSRKNDESDNKNLLSETEQLLAKNEKNEKSQKKTISDKPILKRMKRKIFFLIILILLIGLTFIKLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS35</accession>
    <name>A0ABV2AS35_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004006</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002929">
        <property type="protein sequence ID" value="MES1922488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="209"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="214"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="28466" checksum="E7E8026454C19D12" modified="2025-10-08" version="1">MNVKELSNIISICSASYLNLDFDDKIQKSKTKFQQKNLILLESDEIHLSETKDYKAAKIFLNEKRLYAVFIAPKNEIDIKTVLENLSDPLNWNQLVKSFAKPKQKQKLLFPEIFLRGSNSLSNKNFNRFCLNFEDFYPENFEKQKFCLFNISLLTSPFVDDLDEENERNKYTKKDVYMCLTSNFIVFVHHSKSSAMIFSGIVNPSEMTKDSLNRKKKDVKYRAGRSPPRGDKSHVLTFSKTLEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS46</accession>
    <name>A0ABV2AS46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Serine/threonine-protein kinase M1</fullName>
            <ecNumber evidence="7">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MEC1</name>
        <name evidence="7" type="ORF">MHBO_004005</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PI3/PI4-kinase family. ATM subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010002926">
        <property type="protein sequence ID" value="MES1922487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050517">
        <property type="entry name" value="DDR_Repair_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057564">
        <property type="entry name" value="HEAT_ATR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003151">
        <property type="entry name" value="PIK-rel_kinase_FAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014009">
        <property type="entry name" value="PIK_FAT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139">
        <property type="entry name" value="ATAXIA TELANGIECTASIA MUTATED ATM -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139:SF69">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE ATR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02259">
        <property type="entry name" value="FAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23593">
        <property type="entry name" value="HEAT_ATR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51189">
        <property type="entry name" value="FAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FAT" evidence="6">
        <location>
            <begin position="1"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="35020" checksum="6BB592864AE38364" modified="2025-10-08" version="1" fragment="single">NGMVEEEGLSWLKVAKEARKSNVLTVADSALMSAKLMGVPENLMFLEKAKLMKAKKRKFEAIQILQNFVEKETEKVESKNLEALKGTEVCLSKARMLLAEWSIAFKAKKSNEILSLLHISEKEPGDTKLLDKTRYLLGNYYNYLLELKIRDSSERSLVRELMYQSILFLMLSLRNGNKYLFNALPKILFMYFQYCVDGAIELNAKTENLLNKLCQEISEFQWFSVMPQIVSRLATENRSSEQFIRKIALRVFMEYPHQMCWIFLVNTEFSVFNKRHNAKKIVLEVKDIFKEHKQKYLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS61</accession>
    <name>A0ABV2AS61_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Argonaute 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">AGO5</name>
        <name evidence="2" type="ORF">MHBO_003796</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002525">
        <property type="protein sequence ID" value="MES1922286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036085">
        <property type="entry name" value="PAZ_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101690">
        <property type="entry name" value="PAZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="25439" checksum="D0E0181069EC0E51" modified="2025-10-08" version="1" fragment="single">MKKNDSPVKTKDAPKKVDEKEKQPIIDEKLALVAKRPQKGKIGKEVTVITNSFVVRTPLDQIHLHLIEFTPDIPEDAKDQRLSAINNKSVRDKIINTYGPYFFENKHLLCLRKKEAENQFTNEDLTQTITVKYLKSIDLNDLTSQHINQHEQIIHLMLNKVIRGSDLVRIGQNYFERNESLFSGKGLFDIRERGCPDIRIWRGYSISCERKTGGIHMNVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL9</accession>
    <name>A0ABV2ASL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004186</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003374">
        <property type="protein sequence ID" value="MES1922668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19608" checksum="27ADCBE4C792624A" modified="2025-10-08" version="1">MVFEILIPAGIGSSFRKEYKTHEVRVQYLLRASSRVNNSIVQKETPVFISKYPFATIDWFQTSPTELHKEIRAKQKRTEETTSCFCMTKSIEVEDNVDVKIAMEYIPSVRVGDQVECAVKFSSTEFKKPGGKLQLRLSEILKIEGEEGEIEVEVDRKEIEKFSHLQKKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP4</accession>
    <name>A0ABV2ASP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Translation termination factor eRF1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ERF1</name>
        <name evidence="2" type="ORF">MHBO_004223</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003462">
        <property type="protein sequence ID" value="MES1922700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005142">
        <property type="entry name" value="eRF1_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004403">
        <property type="entry name" value="Peptide_chain-rel_eRF1/aRF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="Ribosomal_eL30-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10113">
        <property type="entry name" value="PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03465">
        <property type="entry name" value="eRF1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="L30e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eRF1" evidence="1">
        <location>
            <begin position="2"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5590" checksum="DE734C620395BF38" modified="2025-10-08" version="1">MSYGTKLNFVTDCSQEGGQFVRGFGGIGGILRYQLNFDDLVYQNSEDSDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS3</accession>
    <name>A0ABV2ASS3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Peptidase M14 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004235</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003491">
        <property type="protein sequence ID" value="MES1922710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.10">
        <property type="entry name" value="Zn peptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057246">
        <property type="entry name" value="CARBOXYPEPT_ZN_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000834">
        <property type="entry name" value="Peptidase_M14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11705">
        <property type="entry name" value="PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11705:SF143">
        <property type="entry name" value="SLL0236 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00246">
        <property type="entry name" value="Peptidase_M14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53187">
        <property type="entry name" value="Zn-dependent exopeptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00132">
        <property type="entry name" value="CARBOXYPEPT_ZN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase M14" evidence="8">
        <location>
            <begin position="70"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00246"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18386" checksum="114959E30DA61FC9" modified="2025-10-08" version="1">MVQVRKNVLPLDSGLEVVHHPMDLKKAVQRTKAAASENNRFHSRFHQYDEILNFYSRVERDINRIEGMHCEKRTFGKTTSGEEMIALKIWRDSEIVQNRPKFLMLGGMHSREWVGISTNLMLVAKFEFEFIDLKVLRFGGSEVSENSREKRIAFNSGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY2</accession>
    <name>A0ABV2ASY2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004212</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003437">
        <property type="protein sequence ID" value="MES1922689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14665" checksum="AA43F812FD6918D0" modified="2025-10-08" version="1" fragment="single">MSSLLKTRKFIKTKKSGFRLKPNIMSYRFASTTEPKYNYQKYETSEGDGDVQIRRWRTKDPEVMDKILSYKSSIDSDVKGILEKYPSNEVVSNKPIFNQWFFLPRPIHTFGRSGKRTWGAPIFAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ9</accession>
    <name>A0ABV2ASZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004121</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003192">
        <property type="protein sequence ID" value="MES1922604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="186"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="186"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="266" mass="29407" checksum="825756748354AA16" modified="2025-10-08" version="1">MSVNENTELSFLTHKPVVVVFREKDVTYPKCTPIIQFVCHDVLPLPYDGDGSEGKGRGHMCDCKVCSANYTCTQEDKPTCRVSPLRLKRKRDDDEDDEALQEALLASVHPYLRAPSTFGFLSDEDSDNVVIREGDDGSFTYEDGSSNVPACRRRRVDAAPRRRRGRPIRLTRRAGNVVAANTVSTESAPTATDNVSDNVRSSDNAPISGTFNNNDLPDIDESPVVRKVTAPRKVPAVRDAPVADQVPTVRARTLRLTTKRVLGPRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT63</accession>
    <name>A0ABV2AT63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004398</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003934">
        <property type="protein sequence ID" value="MES1922870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="47"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13762" checksum="73583549E7171126" modified="2025-10-08" version="1" fragment="single">MAGVYNSRFERSKYAHLSIDQILNLFEKERMENVFLKEDLHNKKMTIKSLHKKLGKLRNENANIASKRFDGDITPDKSETEKLKSPLEDYENIIQRLNDDKRDVSELNAFCNSQKDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB1</accession>
    <name>A0ABV2ATB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA-directed RNA polymerase II subunit RPB7</fullName>
            <ecNumber evidence="7">2.1.1.354</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">POLR2G</name>
        <name evidence="7" type="ORF">MHBO_004199</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.354" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010003397">
        <property type="protein sequence ID" value="MES1922676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140999">
        <property type="term" value="F:histone H3K4 trimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.120">
        <property type="entry name" value="RNA polymerase Rpb7-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036898">
        <property type="entry name" value="RNA_pol_Rpb7-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045113">
        <property type="entry name" value="Rpb7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005576">
        <property type="entry name" value="Rpb7-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12709:SF4">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12709">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II, III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03876">
        <property type="entry name" value="SHS2_Rpb7-N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88798">
        <property type="entry name" value="N-terminal, heterodimerisation domain of RBP7 (RpoE)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase Rpb7-like N-terminal" evidence="6">
        <location>
            <begin position="10"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="5">
        <location>
            <begin position="79"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19513" checksum="E677FE8F54C92BBC" modified="2025-10-08" version="1">MFFLVERTESVSVLPKHFSSTLKEHVVNQLKKKLEGRSIGNFGYTILVTTMIDMSSGKLRDYTGEAEFEVRYLSLIFRPFIGEVLFAQVTVVNQNGFFAEAGPVTIFVGIQQIPKEYNLDNAESVPSFVMEEEDLRISVGTLVRIKIIGMRLEVSSEDIPVVGTINENYLGPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB9</accession>
    <name>A0ABV2ATB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004434</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003997">
        <property type="protein sequence ID" value="MES1922905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14161" checksum="3A569584272F8E11" modified="2025-10-08" version="1">MYGKKRAYLAINCMTSRAGHVKTIAKYIIDNNEFTCKELAENTDVPRTSITRTLYRLEQCYSFQFEKTTNGRFTDFKLLGCNFQGTRKKIDSTPKTKVEIIEPLRKPLSMNHLWASALQMQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF7</accession>
    <name>A0ABV2ATF7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004482</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004133">
        <property type="protein sequence ID" value="MES1922951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034393">
        <property type="entry name" value="TatSF1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15608:SF0">
        <property type="entry name" value="HIV TAT-SPECIFIC FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15608">
        <property type="entry name" value="SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="192" mass="21949" checksum="1F9DBAA47EA11BFF" modified="2025-10-08" version="1">MLDGSFISPEHQIRVEKAEFKMKGDVFIPGKRKTARENASKRMTKRKIAMAQSQSRELCWDDAEEEELAGRAKLRIVILKPMFVLKEVQKSENLESFYDDLGKEVGLECEREAGSIEKLTVFEGSGEGAIAVKFKLATSAARCISVMNGRFFAGRKIECSYFDGTDYRVDKEETEQEREQRIAEFGKWLTKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG5</accession>
    <name>A0ABV2ATG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004179">
        <property type="protein sequence ID" value="MES1922963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="24567" checksum="FFCCD33C7D5CF83C" modified="2025-10-08" version="1" fragment="single">ELVEYLLRITEKITQKMKLSKKFNILLQYAVLVIIAFLRCGLIDVILEITENINSEIRSFGQILLKNLQQFCGDFFPAKLFNQYFSLDAVELDAIDFKSSKYKMASNLIININFSLPFNENFVPLKSVFVPTNEAEQAERNSSAKSKESEKVNSFIENLFEKVKKIDIFSFYRRYRYLIKNIPNNIDFPHFLISHKNFRLGVNERKHVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ6</accession>
    <name>A0ABV2ATJ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004523</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004264">
        <property type="protein sequence ID" value="MES1922990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="172" mass="19743" checksum="BD0840B0252C75B5" modified="2025-10-08" version="1" fragment="single">MSDKLEKVCKLPFMKSILADSHDSRPATMVLWRLSGKTSLDWTEAWLSPQFLESRMLLFLSGIIDGYHTARRGFSIEVESVEKTELFGLADLEEKLVLLLKFGLRVEVRGNDDQVYKNEFLFSSKAARAEVQNCLKKQSGRKSIKFDFKHDAHLDGRKTRKSINRSKSSDQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL8</accession>
    <name>A0ABV2ATL8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004548</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004370">
        <property type="protein sequence ID" value="MES1923014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.400.10">
        <property type="entry name" value="GI Alpha 1, domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011025">
        <property type="entry name" value="GproteinA_insert"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF302">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-5 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00318">
        <property type="entry name" value="GPROTEINA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47895">
        <property type="entry name" value="Transducin (alpha subunit), insertion domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13910" checksum="1AC783942A90080A" modified="2025-10-08" version="1">MSDMLLSKGIKGTKVSEANSQIKEDILATFDLRDAPDRWESVCTKIKKLWEEEAGLKIVYENRAMFQLPGAGDYFINKAEEIGKKGYFPTQDDILRARVRTTGIVEKEFNIGKTKFKVFDVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN2</accession>
    <name>A0ABV2ATN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004321</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003744">
        <property type="protein sequence ID" value="MES1922796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="114"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="114"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="17748" checksum="B5A0B77F5DB9DEF3" modified="2025-10-08" version="1" fragment="single">RCLKEPNKVINGITIKCDFSSRRKKTLSHQSQYQNPANYNPMYSQPPQIQQTLPPQHQTLQAPIAQEIQRHLEQLQFQQQQLVQKVNASALQSNSQNYEQPSYDAQTAYSPQNAVQGYYSGPTNRGNYAAAKRSGDGEVTTGMKREAKYYGGPVQNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP9</accession>
    <name>A0ABV2ATP9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004443">
        <property type="protein sequence ID" value="MES1923040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32343:SF22">
        <property type="entry name" value="LD29830P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32343">
        <property type="entry name" value="SERINE/ARGININE-RICH SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="2">
        <location>
            <begin position="68"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="19999" checksum="33EFD1CED6C28F44" modified="2025-10-08" version="1" fragment="single">VKAAVLLSGTDLGDRLINVAPIPAEKTQKRLLTPAETIASLTEAARRLNPEDASLNENNDNEQQQIASTVYVGNVSPQITEPELREFFMTFGNVVYIKMAGNPTLGITYAFLEYDCPEAAQKAMAATSSGNAVLGDRPLKVGPAMNAIVKPPSVTVNSDPSRIESAMRRVMRAKRNLEARKGVKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU3</accession>
    <name>A0ABV2ATU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004603</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004533">
        <property type="protein sequence ID" value="MES1923067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="19098" checksum="0ADDB91E97DF7941" modified="2025-10-08" version="1">MIKYVLYFASIPIFINTNKNTCNLPDKTGLLIRNMTSASNQYLIFEISCSHLYDLYYKKKKMPSKVVEKFLCDDVYKNVAELEPIDFFSCYFTSYFTIIIFAFIMVCLFVLLSALVRLRLLRRRQINENRLFYGRIDRFDNRQPLTTILEEMSEIEDETGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV3</accession>
    <name>A0ABV2ATV3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004634</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004642">
        <property type="protein sequence ID" value="MES1923095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19684" checksum="4F1CEF9DD773CD7E" modified="2025-10-08" version="1" fragment="single">KEGMSLEYSSFLKIIDKFGIKTEENFLKIIAILEQKIKSIETIFPNLSVQKTTHYDRVKTRERSRKQKQLIHTKNRLLSGIDEPMRDTKSKYWDCSQLIIGETFEENDFENVISDFSDLDRTNFNLQFGIERFKTSEVFYQPSLVGFDNMGGIGDTFSRLLKTKTIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU00</accession>
    <name>A0ABV2AU00_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulator of nonsense transcripts upf2, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">UPF2_1</name>
        <name evidence="2" type="ORF">MHBO_004430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003988">
        <property type="protein sequence ID" value="MES1922901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003890">
        <property type="entry name" value="MIF4G-like_typ-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039762">
        <property type="entry name" value="Nmd2/UPF2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12839">
        <property type="entry name" value="NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12839:SF7">
        <property type="entry name" value="REGULATOR OF NONSENSE TRANSCRIPTS 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02854">
        <property type="entry name" value="MIF4G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MIF4G" evidence="1">
        <location>
            <begin position="10"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="25235" checksum="93CA1EC2BFBB3DD0" modified="2025-10-08" version="1">MYCCAAIRPASIVAALNKFYSIGVIIVDAVLEEIRMGLETNSIFEVQRRFAFVLFLGELYIYRITNSQVIFDTLYLLITFQQQQFSNSVSTKLSFDPFLQSDSENKFSSGDYFRSPQQFRVTLVCSLLQICGRFFKMNRNRKRLDRFMMYFQRFVLVTKAKAEKALDIDTEFAVEEIFDVLRPRVRHYKLLKDIDTAIKALYEDFGDDGFGGGNNGKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU44</accession>
    <name>A0ABV2AU44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytosolic Fe-S cluster assembly factor cfd1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CFD1</name>
        <name evidence="2" type="ORF">MHBO_004428</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003985">
        <property type="protein sequence ID" value="MES1922897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19920:SF0">
        <property type="entry name" value="CYTOSOLIC IRON-SULFUR PROTEIN ASSEMBLY PROTEIN CIAO1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19920">
        <property type="entry name" value="WD40 PROTEIN CIAO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="55"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="100"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17814" checksum="2969EA0F47F289B6" modified="2025-10-08" version="1">MRQVFFLNSVYWRPAVLMEPSTFLLSIKTTAVFNKFLISQKFVKFAKDLELISSLEGHENEVKCVRWHSNGTYFASCGRDKTVWIWGIEENREIDCVAILNGHTQDVKFIAWHPIDSVLFSCSYDETIRVWKSTSSFDDDEWYCNEILVKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU93</accession>
    <name>A0ABV2AU93_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004783</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005244">
        <property type="protein sequence ID" value="MES1923239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="21"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10801" checksum="3C75A9C51BC337A5" modified="2025-10-08" version="1" fragment="single">VKHHRETIANHHKPKRPCLNTIANPSSPNQDRGAIYNTSPTQTPSHHHHPHHRPKTQSAFKHSPPVKNAQIKSEPLNTIRSQERPNQEQGPFPTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA3</accession>
    <name>A0ABV2AUA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005232">
        <property type="protein sequence ID" value="MES1923236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="7914" checksum="E35E80F7D1CE974A" modified="2025-10-08" version="1" fragment="single">LKLLVLTKMPLCHMKFQIMNYQLQGKLSCLNLVELVQLLHMLSLMASSLLKTIRKFTILAINLVLQMW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA5</accession>
    <name>A0ABV2AUA5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SLC12A transporter C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004781</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005236">
        <property type="protein sequence ID" value="MES1923237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018491">
        <property type="entry name" value="SLC12_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004842">
        <property type="entry name" value="SLC12A_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827:SF6">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 12 MEMBER 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03522">
        <property type="entry name" value="SLC12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="SLC12A transporter C-terminal" evidence="5">
        <location>
            <begin position="47"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22890" checksum="E31FB23B6844C21F" modified="2025-10-08" version="1" fragment="single">FLVLSDEKSMFLPKFAKNVLKEGKVTNFFGTIFCHKNYDGNYNTFFKLKKRRKIWLDQIRNFKGFPKSVFATDFHTGANSLIQSTGVSIITPNSVLMGYRENWGCNSDISTEINNSDFREKMAENEEKSKLFVETIRSAMLFEKDVVILRRFSDFDFESVYRNETLDVWWTDDDGGFGILFPYIVSLYKKFENFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD8</accession>
    <name>A0ABV2AUD8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cleavage and polyadenylation specificity factor subunit 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Cleavage and polyadenylation specificity factor 100 kDa subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CPSF2_2</name>
        <name evidence="3" type="ORF">MHBO_004827</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005416">
        <property type="protein sequence ID" value="MES1923278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027075">
        <property type="entry name" value="CPSF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45922">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45922:SF1">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="166"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="166"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22630" checksum="1448C090A0E2FE6C" modified="2025-10-08" version="1" fragment="single">QIFLKIAQNRKNLLLLTQRSPQNTIAGVLQRNPMAKNVDFKITETEYLTGEELEEHLQFARETEREIKRMEKSRTEGNDIEIIDEDIVFSKKYGKKRGIKKRKIAQIYPMFPFPEKYFVSDDYGEKVDFLDLLGDSNEDSVDDDVISVEFSNKSKKFIKRDERNRIIEKDKDSNKEQKTEKMEDIPVKTVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH6</accession>
    <name>A0ABV2AUH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004566</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004420">
        <property type="protein sequence ID" value="MES1923032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="20381" checksum="0EC917D360CCE0B3" modified="2025-10-08" version="1">MFAKTLKISKRGYRPYIFPDIYSKDLSVSKSYSLFRTYYLVNLALMVTTPLVFHQMTVKAEQEEENHKEYIRRVEKYIVKPQLEKRKEIEKIAWFYRLDPETESGLGEMKRIVESRLGVTDSMECFNILSKDRPWKTKEEMEFKAKMEKFMAYPNYFASSMKEALEMSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK1</accession>
    <name>A0ABV2AUK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004908</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005739">
        <property type="protein sequence ID" value="MES1923344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17586" checksum="5098E79B259147D1" modified="2025-10-08" version="1" fragment="single">NVQIRILKKKPKHDTGKRLTQRKEVEYKKPAQLKFDKTSERKEQDIDKILSEKIRRINLNVENIKKAIERGEDPYKYKLDKSKPSTETNVEGIATNLYESKVVRASERSTRPGDSIARLRGRVIYYSNDFGQISFFAGVGYKNLPVSFFLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM7</accession>
    <name>A0ABV2AUM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004916</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005779">
        <property type="protein sequence ID" value="MES1923352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="13925" checksum="81BF3EB8C74C4C13" modified="2025-10-08" version="1">MTQCGIQVNEDTFTTDTQDIENTFILPDSNITSTDHRTQIHQAHQSTNQNGLGAKTDEAVALGDIVISGLDDFIQRMRTPQVSTLKADYDEAKLDSDIDSANSSMSCSEDGADGERVRKNCKKKEKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY4</accession>
    <name>A0ABV2AUY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005036</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006309">
        <property type="protein sequence ID" value="MES1923462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="5965" checksum="BF1A914A3BF0D7BA" modified="2025-10-08" version="1">MGGKREMEGKGEKQWEGRGRNNGRKGGENGREGGREWGRGKTMGGKGERMGGGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV65</accession>
    <name>A0ABV2AV65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005147</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006875">
        <property type="protein sequence ID" value="MES1923555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16471" checksum="DCB3385A6C978F7B" modified="2025-10-08" version="1">MMNSVRGNLRECVVQRKTLTYEYIGELAINCLKYQDAYFKLLANNCSYNSLMIDSVIANIDQTGGDESDKWSLFKGIHKGLHSNADPASRRICGVQYLHLCPTVSVNGNVGTTLAPDDIALRSNKARVMPNIYTLNKKTHKGASWEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB9</accession>
    <name>A0ABV2AVB9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Adenylate kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004911</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the adenylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005754">
        <property type="protein sequence ID" value="MES1923347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00235">
        <property type="entry name" value="Adenylate_kinase_Adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033690">
        <property type="entry name" value="Adenylat_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="NUCLEOTIDE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00406">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00113">
        <property type="entry name" value="ADENYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="158" mass="18204" checksum="7DAC3346A876E28D" modified="2025-10-08" version="1">MDKGLLVPDDIVIGLIQKRMSADDVKRKGWILDGFPRTGAQAMALEKASIKPNAVLLLEVALDVLVKRTINRRLDPITDKIYHLEHDREILERDEELKKRLIARSDDTEEKCKLRFETFNENAESVLGCYKEICYPLDGAKHREETFEVISKIIDKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVK4</accession>
    <name>A0ABV2AVK4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005259</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007385">
        <property type="protein sequence ID" value="MES1923642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="15183" checksum="54D20131F5560631" modified="2025-10-08" version="1" fragment="single">MMLGYMLGAYGPTSGYNALKSFATKKNAFGSQVQITAPSLTGTMLVGADVISANEFTKYAVTPIDRNSDIFGQDIGGIMNVRMPANLLSGIRYEQDVQVLNGKMKAMFYGHKNDHDLVSQNAIGSKVMTTSMYMLTGNQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ADY8</accession>
    <name>A0ABV2ADY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000013</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044210">
        <property type="entry name" value="Tfc3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15180">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15180:SF1">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="328"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="341"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1917976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="809" mass="93699" checksum="61E92BC9D402A57A" modified="2025-10-08" version="1">MGELRYDFLEEKTDYFWNDIRAGFYAIFDICGEQSDSETLLELTKNFNFNKMATETVINFILQKNIGIPKQKRILRILKKRKVSPSQKHPLSAIIPSILKLYPVQNLPELYSSKNWRLLKLSQTAKENLLQAEPETLPGSSAIEAISAKLKIAKSTVASFYASRWLPFVEETHSIQRPYANSVDDLEAPFVAPARKFVLWKVFYSLPVAEKEDEKQSIRSRKRKTEPNFNVGALKMGKLSPDNRDVLISENGVTSEKKTGETEKGFGRTPLSLREQEILFRQIYFKIAEESIMYSKKRKSAVWTESETEQMVRAVVDWHIREMVKPKPLMEPPKWDPTSSEDVKENDNDCSASEKNKKKVRLDFVWDFAAEKVPGKSAIQCNNRFTKFSSHFKQELKKHILLSIGYSPNSKLVSSELPENDLLSNYKFKKLSIGKNDKKAFFASIKTSDEKKSESAAKTAQISAAKDLLKIVFSELDATYDKNIGKKMLEKADEDILKNAFVELFEDEAIERVQSDHGKLRSWQMSFPYRNAMDLNKIKSKSTPEKTFGINLRRQIRLNDWDENITLSKKETIKSFDCTIMKNDEAENLRELKIAKSHFSLDFEKETKIEKISEKIEKIIENDILTKQQIYTLFQISESKNINSEETKKILAEPTKKEDFEDAMRYLKNRAKIFDVDAKENRFYLRTDIGRYCVDVVDEHKVVDLSRNCDIGKRAIRPWLNLRGEINSELVQKILLKIKSIVCKMPGIRIEGLCKHFKVVLGKSQLKRFLRVLRIDGEIRKRVETKCEKGVATERIVRFYPAVSSKYFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP1</accession>
    <name>A0ABV2AEP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000183</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15264" checksum="28C984B197B0B4A6" modified="2025-10-08" version="1">MGYYKYKQIKSDLLNKKGIEEYWPNENVGDNYSGIFIGDNIDGDTVTGIKLLMDGLVDFVFIHAVVVDQPLNFPHPQIFYFRDYKEAADLAFDHNLINLNTHSKIYEEYDKEYADYNNIEKIINMDESEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEW1</accession>
    <name>A0ABV2AEW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19504" checksum="732C5C6B907CF392" modified="2025-10-08" version="1">MNSRSKIILTVQTTKTKNLKITTEVRRNVGLSKKAIVVSAVIAIIATKAQKATTMIIRKEEIEIITKIITTTKEDLTITIITTKEEMAIKIITTKEDLTITIITTKEDLTIKIITTKEDLTIKIITTKEDLTITIIITKEEMANLDITKKILAVTKMGTKAENLNMSKMSRTRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEZ4</accession>
    <name>A0ABV2AEZ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000254</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000034">
        <property type="protein sequence ID" value="MES1918260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16263" checksum="11EEB317FE6092BF" modified="2025-10-08" version="1">MTMEDSSKSDKNDICRLLNMHENKIPNDLIDTNNNLGDLINLKKTELQSKDENLEFKVYNFSVRRMACFNDKDQKAYMPQTNRDAFLKHPMLKKLQDCYSVLEIFDKSLNKVVATFTLEGYMGCNESLVSKVFSVTLDKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF98</accession>
    <name>A0ABV2AF98_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">26S proteasome regulatory subunit 6A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPT5_2</name>
        <name evidence="5" type="ORF">MHBO_000322</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050221">
        <property type="entry name" value="26S_Proteasome_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032501">
        <property type="entry name" value="Prot_ATP_ID_OB_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23073">
        <property type="entry name" value="26S PROTEASOME REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16450">
        <property type="entry name" value="Prot_ATP_ID_OB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasomal ATPase second OB" evidence="4">
        <location>
            <begin position="95"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="ATPase AAA-type core" evidence="3">
        <location>
            <begin position="224"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="301" mass="33537" checksum="23B65C8CF884F0A2" modified="2025-10-08" version="1">MANQILTLDKIPEAERTKLESLSALNNILGKDSSTIKSLVSMLRTNVHIMNQDISRFATAPKRLKHEHRELDRQIKENKDKLKINSQLPYIVSDVVELLDIDPFSEADGGDIGEDKPVRNKCAVIKTSARQTIFLPVIGTVPVNDLEPGERVGANKDSYLVLDKLPAEYDSRVKAFEMDEKPTEDYNDVGGLDKQIEELYEAVVLPITSLERFKKVGIRPPKGVLLHGPPGTGKTLLARACAAKTNACFLKISAPQLVQMYTGDGARIVRDVFKLASEKGNCIIFIGLKYSFLLDFLIFRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE5</accession>
    <name>A0ABV2AFE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000119</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000015">
        <property type="protein sequence ID" value="MES1918098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="32970" checksum="29C4C252239903DE" modified="2025-10-08" version="1">MFLLPKKVLQIPKCYDEAIKFTHQNCESVENYYRNGCTLLVSKGYRFKHGSSFSKYIFLTNFNYLTLCDIVVKSCSHEAYLNPSEQCEKEDLSFFGECVFESYLPIQFIETNSDYSKYKSIDCNKYGLITTKFDTVTGCPLYIFSEFKGVLKYSDACIIRGEYFFDGCVISVSSSYKILTSENKFERSMNVQCTKSGNSIPSSIQIFKGCSKPNSNKKDAIEFNPSCTYLDDKFYGICEINLTKNHVFVEGNFLLEKLTLHCLENGEFDKNYLKIDTCFLRKNQSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH7</accession>
    <name>A0ABV2AFH7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">MFS transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000423</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000064">
        <property type="protein sequence ID" value="MES1918456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13347">
        <property type="entry name" value="MFS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="194"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="234"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="265"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="292"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="386"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="439" mass="50022" checksum="F4CD06234CC57672" modified="2025-10-08" version="1">MFYLIVQQMKLSISDYDLISTVTYGITFMFDPLVGSLSDSFSCKMRRTGFIFVAAFIIPISYLALLMNVSFEDHTDKIVYIIVVICFYNLGKSFSKAPLTALGSEITDEDNSWYIAFRTVLYNLGIILGTGTVELVISNSKSYSDEIDALGISAVYSAFFMYLCYMAMLILLEITKKKSRSKQSGFRCSDFYKIFGHFVYIALVIINLMFQVSNNLVIINMNQYLKYSVERDGWLFKCTCALTGSVVVSPFLIKKIEKPVGLIKLFLIGTIVYLISLYIMGFWVVKGAIGDALLILSCIMNGFGVATSYICIRKIQEIIYERDKYLGRDRKAIYPAINSSITRLGYLFTNKIVAYFLKNSDEFFKHPKQAVFGHEAQKVGRLIIEVMVYIPMALLAFTSILISLYTFYKDWYLIDDLKPEKYLHDFKGKDAEKSLGITI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ8</accession>
    <name>A0ABV2AFJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000434</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000067">
        <property type="protein sequence ID" value="MES1918469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13800" checksum="158EA89906198D60" modified="2025-10-08" version="1">MINFKIYFLIVFAFSYPMKLRINHDKGAKPTCKMPNIPNMSEKSVFVYDFRLSYLWKMLYDIPMILDPSNLQPMLVLYCHNENNLMEKNETLLDVGLSLCYNQKYYPEPTCNFGYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY2</accession>
    <name>A0ABV2AFY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Peptidase M48 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000520</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peptidase M48 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000086">
        <property type="protein sequence ID" value="MES1918568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2010.10">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001915">
        <property type="entry name" value="Peptidase_M48"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10120">
        <property type="entry name" value="CAAX PRENYL PROTEASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01435">
        <property type="entry name" value="Peptidase_M48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1 6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M48" evidence="8">
        <location>
            <begin position="2"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="20127" checksum="813F834383F2046A" modified="2025-10-08" version="1">MYGCCGQKYIVLYDTLLKQCSEQQIIAILGHELGHWKKSHIIKMFIVLEAFMFSTFYAMRLFLFSDDLYTSFGFTENPVIIGTFLFFVLYEPIEQIRSVLFNGYMRYLENEADDFSSDLGYSEHLVEGLLALERENKSGLITDPIYSLFKHNHPPIIERVRRLRLKMNKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG41</accession>
    <name>A0ABV2AG41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">A-kinase anchor protein 7 isoforms alpha and beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">AKAP7</name>
        <name evidence="2" type="ORF">MHBO_000568</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000096">
        <property type="protein sequence ID" value="MES1918625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1140.10">
        <property type="entry name" value="Cyclic phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019510">
        <property type="entry name" value="AKAP7-like_phosphoesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052641">
        <property type="entry name" value="AKAP7_isoform_gamma"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009097">
        <property type="entry name" value="Cyclic_Pdiesterase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15934:SF2">
        <property type="entry name" value="A-KINASE ANCHOR PROTEIN 7-LIKE PHOSPHOESTERASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15934">
        <property type="entry name" value="RNA 2',3'-CYCLIC PHOSPHODIESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10469">
        <property type="entry name" value="AKAP7_NLS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55144">
        <property type="entry name" value="LigT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="A-kinase anchor protein 7-like phosphoesterase" evidence="1">
        <location>
            <begin position="126"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="304" mass="35445" checksum="6D4B77059D56E759" modified="2025-10-08" version="1">MKRYSKRLVDLLEMEFEDIKINDKTFRILKAGDLNKPFDKSQKYEQKENIPLFFNKPFDDKSNLSETKESEIIFNKPFVDKSNLSETNKIGNTNLMMNEESGKIRNQNDGILEKKVLKKSSEKMKPNYYVSIPISNPETLKNIENFQNGFVDKNKKLKPSKTEELHVTVCLLRLETNDQIESAKKSFQNFKFPTKLKFDLRGTGEFGNKIIYITTQNKENRDKLISFSKNLCEAFKEEIAKEQISAIETPHVTALRCRRSAKKQIKKIPSDLNFGTQIVERIDLLSIKNCSKEQRKLIARIKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGA5</accession>
    <name>A0ABV2AGA5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">fructose-bisphosphatase</fullName>
            <ecNumber evidence="3">3.1.3.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">MHBO_000643</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="11">Carbohydrate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the FBPase class 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.11" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000113">
        <property type="protein sequence ID" value="MES1918725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.540.10">
        <property type="entry name" value="Fructose-1,6-Bisphosphatase, subunit A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.460">
        <property type="entry name" value="Phosphofructokinase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01855">
        <property type="entry name" value="FBPase_class1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044015">
        <property type="entry name" value="FBPase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000146">
        <property type="entry name" value="FBPase_class-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033391">
        <property type="entry name" value="FBPase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028343">
        <property type="entry name" value="FBPtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000023">
        <property type="entry name" value="Phosphofructokinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035966">
        <property type="entry name" value="PKF_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF005121">
        <property type="entry name" value="PRK06555.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556">
        <property type="entry name" value="FRUCTOSE-1,6-BISPHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556:SF35">
        <property type="entry name" value="SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00316">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18913">
        <property type="entry name" value="FBPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00365">
        <property type="entry name" value="PFK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00115">
        <property type="entry name" value="F16BPHPHTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56655">
        <property type="entry name" value="Carbohydrate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53784">
        <property type="entry name" value="Phosphofructokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 12" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phosphofructokinase" evidence="14">
        <location>
            <begin position="2"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="Fructose-1-6-bisphosphatase class I N-terminal" evidence="13">
        <location>
            <begin position="387"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="domain" description="Fructose-1-6-bisphosphatase class 1 C-terminal" evidence="15">
        <location>
            <begin position="506"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="16">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF18913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1918725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="634" mass="69642" checksum="A13C4B310F35EA59" modified="2025-10-08" version="1" fragment="single">ILHTIGGDDTNMSAGDLSLYLLKNYNNYKLSVVGLPKTIDNDVVPIAQTLGAHTAAEQGALFFQNVVSELSSNPNMLIVHEIMGRNSGWLTAKTAQLYMQQNLRSFVDLVQSSKAQVHAIYLPEVKFNADEESARLKTIMAEQGCVNIFLSEGACSDAIVAEIESRGDKVERDAFGHVRLDTLNPGKWFGQVMAKLIGAEKVLVQKSGYFCRAAPAGAFDRDLVRRCAEKAVEFAMEGRTGLCGPDQEQEGEIGCIDYARVSGGKPFDLETPWFRDLVGKIGQRVEALNKQQNLPFFSYCPSDSATLADLEDGENGEKGSKVVSLLTASLLSVHPEETDAIRRLAYSANVKNSESICEIIFALMTCFKNTASACEDVECSDGSATFKNLVNSSFVQSLKAVKNVISLVSLEKNEPIPIKQIKNGFTVYLDPADGSSNIDTNAAIGSIFGIYEGDENKSLNKKPIVSGYCLYSSATILMLTFGNGVFGFTLDKQNNCFVLSHKNVKIPRNGKFYSVNEGYFNEWPEEIKQFVIDLKQKNKSLRYVGSLVADIHRTLLYGGIYFYPQNEHYPNGKLKLTTESRSIAHLIEQSDGRASCLNGEKIMDKKIDGIDDRETVAFGSPILVDGLIKACLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP1</accession>
    <name>A0ABV2AGP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000686</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000123">
        <property type="protein sequence ID" value="MES1918777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11354" checksum="B6F78D1A7261480B" modified="2025-10-08" version="1">MSTADFSQLRSCAENGIVTNWKQLRSQISLKLDETTKSFYKKAINKDISEANSLIYIKKILLDCEEFFISETVTRKFMLLVFKKDLHSQSKEHVNCW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ3</accession>
    <name>A0ABV2AGQ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Iron hydrogenase large subunit C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000746</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NARF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000139">
        <property type="protein sequence ID" value="MES1918850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.950.10">
        <property type="entry name" value="Fe-only Hydrogenase (Larger Subunit), Chain L, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050340">
        <property type="entry name" value="Cytosolic_Fe-S_CAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009016">
        <property type="entry name" value="Fe_hydrogenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004108">
        <property type="entry name" value="Fe_hydrogenase_lsu_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11615">
        <property type="entry name" value="NITRATE, FORMATE, IRON DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02906">
        <property type="entry name" value="Fe_hyd_lg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53920">
        <property type="entry name" value="Fe-only hydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Iron hydrogenase large subunit C-terminal" evidence="2">
        <location>
            <begin position="112"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="471" mass="53431" checksum="7DC8E4F73CC9A98B" modified="2025-10-08" version="1">MENFSTGIKIADINDYVNLETDCIFDESKESPKNKSIKISQKNLVSIKSQSKAKSHFNQIRTNPKTKNAKITLEDCLACSGCVTSAETVLIEQQDTAQFVKMAKNIQKDHIFIVTISTQSIVSIANKLKIKPEEAFNKIRDILIRNYNVSIVVDSATGNYLALKESIVEFLKRLEQNENLPILSSECPGWVCYAEKTLGKSVIPLMSKVKSAQATMGSLIKRHFSENFNPQKMLHVAVMPCPDKKLESSRSQLAFTQNGNKIREVDCVLTTTELFDLLNFENFVNNSQNLDFKRNLKTENFKILKSNFNGRINEKSSSGGYIQNIIDYFVASENSVVKQQNISADFKIVTVTTKKFGDINLIYAYGFRNISKISRQIKSNYFGDKKVHLIEIMACPSGCLNGGGQLRPESKGVRFQKELVSELYSDFNAIKIIDDNFSKDLDFMYKALKRKKEFFKTDFNDNTPKQESLSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU1</accession>
    <name>A0ABV2AGU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000778</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000148">
        <property type="protein sequence ID" value="MES1918883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18865" checksum="75781FEA987FAF1B" modified="2025-10-08" version="1">MANCPNLMMSGESEYFFDIGKFKDIFKTNSKKAFISKRAHEVYFEYQKQLFTDNEITQSDADHYCAVLGEIAIVFVHLYTNDIFYKEAISMNNVLGDRQWNDLNFWLKKEGQLSHVKHLFFVCHVLTKKIDQFLISAIISTKNFRLNKILSFENILEKQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU2</accession>
    <name>A0ABV2AGU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000791</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000150">
        <property type="protein sequence ID" value="MES1918896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003889">
        <property type="entry name" value="FYrich_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003888">
        <property type="entry name" value="FYrich_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040092">
        <property type="entry name" value="TBRG1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22715">
        <property type="entry name" value="TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22715:SF0">
        <property type="entry name" value="TRANSFORMING GROWTH FACTOR BETA REGULATOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05965">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05964">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00542">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51543">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51542">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="133" mass="15297" checksum="EE0440C3D8699708" modified="2025-10-08" version="1">MITDLGRIVTDHRVGHFHNKKHIFPVGFKSERMFLDCQKPESGEKIKYFSEIVDTGGDFPVFRVRCDKYPNLKFLSATAAGAWNRVIESIKMRKKDLGSSKINGHEIFGYGNKTVKKLYEKLPGFDRCVKLQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC7</accession>
    <name>A0ABV2AHC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000938</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000190">
        <property type="protein sequence ID" value="MES1919067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11436" checksum="4FD65906C0EF3755" modified="2025-10-08" version="1">MSGKEDFAMKMCSKIKKHCDFNKNLHEILKLLLQIEKEIDQEVPAKLEEAWASKIMAKNSDELGIFDIGRKKSNLTKFISSFKSSVFLLKFIFALFGQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF5</accession>
    <name>A0ABV2AHF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000779</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000148">
        <property type="protein sequence ID" value="MES1918884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7708" checksum="3C4D619B98416A5F" modified="2025-10-08" version="1">MSDIERKIKTVTSKLRFIKRAKLLAREKFPSSEDIPDLKVVLGPIIGFVSDNTARILMEFNNKMPLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ1</accession>
    <name>A0ABV2AHQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000694</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000125">
        <property type="protein sequence ID" value="MES1918787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="61"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="25272" checksum="127D028A02BD6916" modified="2025-10-08" version="1">MSIDEEIDLISNDLKDEQDRVDQILEKICPADLRVLCQDSKLRSLEESVIDLKRSFSESKMDKAIEQIEEINFRLEKIGRKNKAMDAQKRFLSEQAATIERDIEKLNLALRKKQQIYQKAEKRKIEFQQCEKQLYFLSKLESKEDLEKDIAETKKRLKELEQKGKESEAKNLAKRKKFAFLQNAIDLALTELDDVSESKLIFDLNVNAKEYQPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS2</accession>
    <name>A0ABV2AHS2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">histone deacetylase</fullName>
            <ecNumber evidence="3">3.5.1.98</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001093</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the histone deacetylase family. HD type 2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.98" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000234">
        <property type="protein sequence ID" value="MES1919234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09992">
        <property type="entry name" value="HDAC_classII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="entry name" value="Histone deacetylase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="HDACs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625:SF5">
        <property type="entry name" value="HISTONE DEACETYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="Arginase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0678">Repressor</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Histone deacetylase" evidence="10">
        <location>
            <begin position="75"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="538" mass="60889" checksum="09E3975FC7CAB4C2" modified="2025-10-08" version="1">MIKHKNWYFPVKNIFHSDEEFAESLKTKKLAKNGKRKVLQNGSENGFERKKNCGNRTGLAFDEECLFHFGNSEEPENPERYDACLDVLTLSGLKKRCFPIIANSSIFSVKELIKLAHTKDHMEDLFILNERIGEAICDSNNNDSYYESVFTINSVKQSVAQCVALSELVIEGKLNNGFCMVRPPGHHCDLDRKYGFCHVNNIAIAIKNLQAKNPEIKILVFDWDLHHGNGTEDIFYDDDKIVYISVHQEFDITGKEMFPGTGGISDVGGRSARGRNVNIPVAIGSGDGEFRSIFDHVVSPILKEFAPDAVFVSSGFDSAGGDLLGLLEVTPRMFHYMTERLIREQSNGKVLLFLEGGYNAKVVAQCAAHCISGLLGDFSDFDPKPSIESDFLFSLDNIIRAQRVYWKSLYNSNPLGTNKKSPETTHIVDLSVRKKSRSKRRKKLVALKRYRLTHPEDFDNEISISEHFEEESEYEEVYRDKKVPKIRPLMVPMRALEIIDLTEMAEEKAPESEKSSEENGLEEKVVEIDDGLDVIVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI54</accession>
    <name>A0ABV2AI54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">N-alpha-acetyltransferase 50</fullName>
            <ecNumber evidence="4">2.3.1.258</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">NAA50</name>
        <name evidence="4" type="ORF">MHBO_001213</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.258" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000269">
        <property type="protein sequence ID" value="MES1919368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120518">
        <property type="term" value="F:protein N-terminal-methionine acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04301">
        <property type="entry name" value="NAT_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051556">
        <property type="entry name" value="N-term/lysine_N-AcTrnsfr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42919">
        <property type="entry name" value="N-ALPHA-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42919:SF8">
        <property type="entry name" value="N-ALPHA-ACETYLTRANSFERASE 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13999" checksum="029F36BC65ED1097" modified="2025-10-08" version="1">MILVYLKGDDAELIGTATARVENGRIGYIATIGVNSKYRKRGIGQNLLKILEEDLVLVHKVEKIYLHVHIENDGALYFYKKRGYRITKRIPNLYKFVNRDERQDAFELEKKTVTRNCELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI82</accession>
    <name>A0ABV2AI82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">RING-type E3 ubiquitin transferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001231</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000275">
        <property type="protein sequence ID" value="MES1919391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045234">
        <property type="entry name" value="Unkempt-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493:SF50">
        <property type="entry name" value="RING FINGER PROTEIN UNKEMPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493">
        <property type="entry name" value="UNKEMPT FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="84"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="251"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="84"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="296" mass="34162" checksum="D2E04CC86B15AA07" modified="2025-10-08" version="1">MSDKQNILNILNWYKIQKCTFDRESDCPKRETCLKYHNHNDRRRNPFRFVYRSQKCPNPIKCEKGALCPLAHNDEEIYYHPKVYKMSKCNYFEKTGKCGWGEICSYAHGLDDFRTFEENCAQGEGVQNIILATENELKKNGISEELLTNIQQSVDTTGLGLKDMSLLISKDNDSVELAKLRESLSIATQENANLQKEHDIEVDKLFKSAVKDAIRYESIEKDDLAIETSKFELEVNKALKKYSELAMRIKCSECPDGLREFILIPCGHSFCEKCLNTKKICFTCGSLMESKQKIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA6</accession>
    <name>A0ABV2AIA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulatory-associated protein of TOR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RAPTOR1</name>
        <name evidence="2" type="ORF">MHBO_000866</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000171">
        <property type="protein sequence ID" value="MES1918982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000357">
        <property type="entry name" value="HEAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004083">
        <property type="entry name" value="Raptor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12848">
        <property type="entry name" value="REGULATORY-ASSOCIATED PROTEIN OF MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12848:SF16">
        <property type="entry name" value="REGULATORY-ASSOCIATED PROTEIN OF MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02985">
        <property type="entry name" value="HEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="19755" checksum="886F7FCDF1A9D783" modified="2025-10-08" version="1">MSDGRNLRCWSALMFYKMWQIFPRSKELAYNRAIHNDLLNLLKDPDPEVRAASVYSLGQLARTKLLLKNADFFFLDFSLCHKIALCSKDGSPLVRFLVLVALFRFVCRNKEHFVSESAPVFPNKNSAKFARAQRKELKLILETIDRMKRDPFGRISSCAESFCAHLNLTSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB1</accession>
    <name>A0ABV2AIB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001259</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000283">
        <property type="protein sequence ID" value="MES1919421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="329" mass="38396" checksum="FE94FA3E1379D0C7" modified="2025-10-08" version="1" fragment="single">FAGTRYRTGSSSRLRNNGKADAFEKTGIFDYFKNPHRLLSKNKGEIGSLNDKKFNKNVNDYCNNGPKPFFYNQRYEEEPEEKISQKISSPFLNENYVEFYSISNRQQGFFDETKNLKDDYNYFQLSNSSSFKNLDDYLSGRLRRIPSYAESNSLVTKSEGTSNNKYREERGIFGTSQQRPLGFTGKSANQPNCQYALSTIRKLSCKEKPNKSTSEPTCSKTRKIIGENFKYQFGKLHDDNDHREEEYFIEMILDKFERMLKGDENLSKYDNEEPIVEKILDKLLDYVEGADSVKVNAVGFHGRVNRKILRKLVLDFLEKEKLKKTLNRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE1</accession>
    <name>A0ABV2AIE1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Succinate dehydrogenase assembly factor 4, mitochondrial</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001276</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SDHAF4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000291">
        <property type="protein sequence ID" value="MES1919442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012875">
        <property type="entry name" value="SDHF4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07896">
        <property type="entry name" value="DUF1674"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="170" mass="19631" checksum="A40219F14DCAC2E1" modified="2025-10-08" version="1">MVLVTGSQKRAKQLFERLNKVLQKKANNDLLAVNPTIAYFKAQFEMIKSKDSIKNLDQIELALYKWENFIKKIDKPHVSGVRICKAPVLQNMGQKSKNQFNSLKKTVEIKEAPHINPNSSTEKLSKISKKFDEKIGAKNNKQKFVEIDGYKNKEPTRYGDWELKGRTTDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH2</accession>
    <name>A0ABV2AIH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001154</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000250">
        <property type="protein sequence ID" value="MES1919299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21796" checksum="EF012EAD32CD8A3A" modified="2025-10-08" version="1">MDQILLTAGFNALILFPTVAIIFVFLYCNKDLTKFAAPPYIEYVHSLSGKTTIFNAEIEDRERTNRIFALIETENTDILAKTEDDSNAIVLFAKMLLSQNRIKVDLEKDLIKNWAAAANLGKKAIWRDLALFVFSPLLKNANSRIDINWIIDLCTDYVKVVKPLDKKGEAPDIKKTRIFMRELLEGLIDDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP2</accession>
    <name>A0ABV2AIP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001343</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000316">
        <property type="protein sequence ID" value="MES1919528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045924637" evidence="2">
        <location>
            <begin position="16"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14173" checksum="CF6614FC272B6CCD" modified="2025-10-08" version="1">MWLLTLLFTLQMVRSCVKPLDFEYKQIDENTIETSYLCEKGTLYTPDRVSFTNPFYMICENNTYVLELDRKTGYAQISCEEELSGKIVSIFLAIGIALFFFCCIFMIVICPSRENSKMYIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ0</accession>
    <name>A0ABV2AIQ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001112</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000239">
        <property type="protein sequence ID" value="MES1919253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046868531" evidence="3">
        <location>
            <begin position="19"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="13909" checksum="CA8EA7B470E1CDEA" modified="2025-10-08" version="1">MSNFILSALILFFSSADSQYLVSPNIQGVLDTCSFSPQIEFGSLLSDCDDAESSEICKYRCNVLFLPFYYFGLPNNHTSYSVCINGIWVHPPICEMAISPMVAGIASMCVMFIFLYFYGTIKYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT2</accession>
    <name>A0ABV2AIT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000267">
        <property type="protein sequence ID" value="MES1919364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="30922" checksum="236A7AAE8CC36A3A" modified="2025-10-08" version="1">MGIQVSTLPDENMPSYAFTFPETETGADIFVEEDFNDKGLKETIPLLQDRKTLIAKQEEKEFSGLFSDNEKTKNFIEMMKSRKSFMTLWTQKSIYDHENADKLISYAQELYKYDRDSKVKAKLFWKQIIKDKNEILARKDAVFDFCNEFNDQNKMVPNALEDSRAFILFLGEVFCSDDDKNKLLLKVLGVLDMLVIFRYQFTDGMRNFIKKLHEESIQVNDFWITLNLKDYSDKSTIEQTRVSFMRSSIFNTLLLNVMLQIES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT6</accession>
    <name>A0ABV2AIT6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Translation initiation factor eIF2B subunit delta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">eIF2B GDP-GTP exchange factor subunit delta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001401</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the eIF-2B alpha/beta/delta subunits family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000336">
        <property type="protein sequence ID" value="MES1919600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="entry name" value="Translation initiation factor eif-2b, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10233">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10233:SF14">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00044147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00044356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00046432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="8979" checksum="3C3CBC41F628EF82" modified="2025-10-08" version="1">MIVVKKIKIKDSPDEYIKKANNSKDMEVLKLWREIKSLKILNLRYDIVPSHFATLILTEHGSIPPSSVSVINGRYNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIU2</accession>
    <name>A0ABV2AIU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001396</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000334">
        <property type="protein sequence ID" value="MES1919595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="14"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="63"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="130" mass="15981" checksum="483390766678F039" modified="2025-10-08" version="1" fragment="single">LNSFNFCESLFNCVYMSCCPIFFVLLCHFMQFENNDKKMTVDAKRKKFKLAAKRFKEKRQRDIRKYRQKINSRREKNHNLKEQLEMIVNETNYLRHIYTHNLKQNEKLIENVQKINKSLEERIQKIMSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ71</accession>
    <name>A0ABV2AJ71_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Metalloenzyme domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001492</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000375">
        <property type="protein sequence ID" value="MES1919710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16010">
        <property type="entry name" value="iPGM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="entry name" value="Alkaline Phosphatase, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1450.10">
        <property type="entry name" value="BPG-independent phosphoglycerate mutase, domain B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006124">
        <property type="entry name" value="Metalloenzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036646">
        <property type="entry name" value="PGAM_B_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005995">
        <property type="entry name" value="Pgm_bpd_ind"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01307">
        <property type="entry name" value="pgm_bpd_ind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31637">
        <property type="entry name" value="2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31637:SF0">
        <property type="entry name" value="2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01676">
        <property type="entry name" value="Metalloenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64158">
        <property type="entry name" value="2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="Alkaline phosphatase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metalloenzyme" evidence="1">
        <location>
            <begin position="139"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="368" mass="41922" checksum="A3AA2D877E08967D" modified="2025-10-08" version="1">MDGRDTAPNSGTKYLKRLINFTKEQNYGKLSTIIGRFYAMDRDNRWERIERAYDLLVNGNGEQIEHSLKGVEAFTKKNYEKKIFDEMMEPATLLNPEEGKIQSNDVLIFIDFRSDRMRQIVETFGKKPSFKTEQILSDLGVYQMTEYNKDFNLPVLFPPDYVKNVLSEWIAEKGLKQFHSAETEKYAHVTFFFNGRCEKPFKNETRKLVPSPQVKTYNLKPEMSMDGVKEAVIDAMDLKYDFIMCNFAPPDMVGHTGDYKATLKAVEETDRCVGECVKAAKENGYVMLVTADHGNAEEMIDDRGDPKTSHNCNRVPFALVQPVLENGLKLGLKGDGKSSLRDVAPTVCDLMGLDVPVEMQGRSLLTRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ97</accession>
    <name>A0ABV2AJ97_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001344</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000317">
        <property type="protein sequence ID" value="MES1919529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd20335">
        <property type="entry name" value="BRcat_RBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd16463">
        <property type="entry name" value="RING-H2_PHR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006642">
        <property type="entry name" value="Rad18_UBZ4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45943">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE MYCBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45943:SF2">
        <property type="entry name" value="RING-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51908">
        <property type="entry name" value="ZF_UBZ4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="UBZ4-type" evidence="10">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="9">
        <location>
            <begin position="496"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="228"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="233"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="742" mass="85752" checksum="6E0F5411E73BA87D" modified="2025-10-08" version="1">MNQCPICSKSFPINELEPHIDLCLSLPNKNSSPAISNKDNKNPKIMGKMKTDATEEQNRFDYKQLEKELRKIKLAMKGIRDIVIKKDKDFHCSNKNLYNKIDNDIKLFLNGFNQFRKKFDLIDEPIKKDQMKQENLLEINELDHKILPNKKNPIVGDSKTNNTDIIERGNDMNENGSVSVSEQNDQIINEEIFGRQLYRNKKTIETAKKQKKQNNQNAHFDKIFKHDDDIGKKNQNSQQKNQPQIPFDKFHNKNETLKCAVCNRQMIEEALIKNKCEHKTCQFCISETLIRRIEEKFYENNKLQCLKNGCNAEMPWLFSSFIQNNLLEQFSEQQMVFLTKSDSFINCPKCSHTFYKEDGDENELIQTFNGVALSEEASRDLVKNRFRCSQCKTEFCASCDSVPYHKGRTCEQFSFYRAAPKCRLCKSELVPAQIDGICAKKECRERDEISCKEQLPCGHRCLGTENHAEKKGPGCLVEDCASHIEKKLKVKSEDFCQICWVESLGAAPVVLLGCGHVFHSECVKTKLDKKWPSARITFGYLNCPLCKKLMDLKSEPALRSVFETEKTFFLKIREMAFKRIDLEGLRNDPKLSNKDSHYYNRPHEFAMHRFAFYFCSKCEKPYFGGMRNCEEALREVSENFNKSHLVCGPCSSGKNAKSCEIHGNDFITFKCKFCCGVANWFCWDTTHFCDKCHKKQVVGKSMSRKKISQLPKCKGKETCPLKVDHPPNGVEYSLGCVVCLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI8</accession>
    <name>A0ABV2AJI8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001607</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000421">
        <property type="protein sequence ID" value="MES1919851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="15121" checksum="A438751517EBED2E" modified="2025-10-08" version="1">MVRTFKIPDIMRRRTPDGKIYIRANFSGARLARFRKTILRKGLIWPFEKPLPQLLRKDLPSLNIEKRKERFLKRQAQIAAAMEEMPEKVKIYNEHRNEFSKPRRLGFIRWLTKEFPDSKKKRSKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ6</accession>
    <name>A0ABV2AJJ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001593</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000415">
        <property type="protein sequence ID" value="MES1919834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="50"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13893" checksum="A8338A326DB2A35F" modified="2025-10-08" version="1">MPKTLKKSQTENVKNKSLLTELGSLRKDIREGICILNAKKMGKPVSQHVLNFWRKELEDQNGEDEKLKKELEALRHKICDLEKENKNLIDEMNEQRRQLMKQIDQLNLQLRNENIQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK1</accession>
    <name>A0ABV2AJK1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Gamma tubulin complex component protein N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001603</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000419">
        <property type="protein sequence ID" value="MES1919847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041470">
        <property type="entry name" value="GCP_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17681">
        <property type="entry name" value="GCP_N_terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0493">Microtubule</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gamma tubulin complex component protein N-terminal" evidence="2">
        <location>
            <begin position="100"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20747" checksum="1B146920F58BF588" modified="2025-10-08" version="1">MEAEQKLKDLKIKFLDMLSEINNTADQILTKRKNSEHLLSKENKNLRQNERETKSTQNHFFDYSEFSNKKHKFLERHFSQFTPKLSKPEKIVSENEKRILRDVLFVMQGINGDFFKINSSTNLAELKNDDIFQNKEFERISQTAIMASLECCECGIYYKNIVNVLNMKETGQILKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR5</accession>
    <name>A0ABV2AJR5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001666</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000445">
        <property type="protein sequence ID" value="MES1919923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1112">
        <property type="entry name" value="COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="134"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="153"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="169"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="198"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="211" mass="20386" checksum="BA294C02E88240B9" modified="2025-10-08" version="1">MDYQEKDYYRESFSLYLSGPPGPNGCPGEAGPVGEPGFKGVKGERGRMGCPGPIGFPGDQGLDGCPGCSGKHGEQGKVGPSGPCGIRGPMGCYGSPGKPGLEGPPGAPGMTMVGPPGIKGPQGPPGDAGKDGPVGPPGPPGQLIPGPPGPPGNIGETGPEGIIGDSGPISPPPPPGRPGPPGPPGPPGPPGPVNGTDDTSKIIKDKVAVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ5</accession>
    <name>A0ABV2AJZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001719</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000469">
        <property type="protein sequence ID" value="MES1919985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="19242" checksum="4D2AEA2A4ECC4272" modified="2025-10-08" version="1">MYRKRVLGAAVPKSKIVLSNDKDVKKMKKKMQLGGRSHYNKRENIKSLMKNFEKLKTTNFYKNGKRNEFSLDIFSPEECLREGEIKRDLRNKSFKKERANKSKFPKTKKIDLSKKQKSHTKIRKRGLSPQTAPLMEHDAFDTILIEEEKVCHSNVVSFKHCYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK41</accession>
    <name>A0ABV2AK41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001772</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000490">
        <property type="protein sequence ID" value="MES1920046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="31221" checksum="3E1C1DBA02142537" modified="2025-10-08" version="1">MDSSSSSQKVVHIFQGISGIGKSFTGEKLTEKLNSLGEASKHIEQDHFVLKNGKANKNSSRDCLNKYEEYLKEGDLHHIIQTRNNFKEGDYEKYVKPAKSNGWKVNFVVPKDYEQNKYRYLVVALCSVFGRKMNGRKGEEMSHRKKFSIVFDFFKLLVIADGANEYVDYMTPISYLKDVCNDGSGHFEKRDLSEEQTDYLNELCDRVEPFVCKDHAITQEVADKIIEDFKFGILDYTEWRNPVDSIVDDLINQFENENILKKRVYLLAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB7</accession>
    <name>A0ABV2AKB7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001658</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000442">
        <property type="protein sequence ID" value="MES1919914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044978">
        <property type="entry name" value="GRV2/DNAJC13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36983">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36983:SF2">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="487" mass="57747" checksum="5F303E01D59C7219" modified="2025-10-08" version="1" fragment="single">NIFAKFDSPNGEDRRACLPAFQIFSKNKNFFKIFLSTIFLFFRKIFEDDVFVSKEEILEILISLQQTNPNNFPLIVLETGGFLILLEKMARSPDQNKKFARKLQFFLTKLAARNNKNSAELKKALFLLLPKSFERVLETTNGAHSFFEMFWGDFEAPDFFWNENCRKELRDFLESEVDLLKERIYSNEKPKKKDFDLKAFAQRAKKRKNLLNSKLSVNGIYVDPFNRNPDFRIENPKELILKTIEAIKSENRFYKFVERKKTENGTKNKMAHAKKNLGKLWQFLKFVIGQSDEKIWRTPLEQCSTIIFENLQNMIFPEDFDFIENLIFLVDKLAYFENSKINKRQICSLLSFAYTPNFDVQILSKILTIARKCQSQSKNRNQFLNSTAILFINLVILNSQNIESEKIALEILFWNEKNKTDKTIWSVKFQKLDEMAEIYKEFKQTENDKVEIIKNDINEYLKSAKQNLFWEKMENRETAEKLIRNIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC0</accession>
    <name>A0ABV2AKC0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Zinc-finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001831</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000518">
        <property type="protein sequence ID" value="MES1920115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="144"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="198" mass="23180" checksum="C1F4B55060A15D4C" modified="2025-10-08" version="1">MKKLNFLIEKKKPNLTCHFCEHPAKRTGRKSHSEQMICQLSGCGKVYCSTKGCEAKLLYYYKLFTNFQSLKNATEKKLFFFRCPHCINPFLCNGRQCLKKRCIDRASLKILDDGRLSYRKIPSEKIKKRKLKINPKNNHLASFFNMKSIPGPPQQTKKEKKDLSEESSENDVLSVESIEKVLRRNFNVVKAENRIWEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKI1</accession>
    <name>A0ABV2AKI1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Tr-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001549</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000397">
        <property type="protein sequence ID" value="MES1919777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01887">
        <property type="entry name" value="IF2_eIF5B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10050">
        <property type="entry name" value="Translation initiation factor IF- 2, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053905">
        <property type="entry name" value="EF-G-like_DII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023115">
        <property type="entry name" value="TIF_IF2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036925">
        <property type="entry name" value="TIF_IF2_dom3_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381:SF4">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 5B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR IF-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22042">
        <property type="entry name" value="EF-G_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11987">
        <property type="entry name" value="IF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52156">
        <property type="entry name" value="Initiation factor IF2/eIF5b, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="6">
        <location>
            <begin position="193"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="643"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="643" mass="72826" checksum="59D628D06E8ACB63" modified="2025-10-08" version="1" fragment="single">MLQTFKSNKCTRLRLIFQTKTRFFAEENLNESNSFKKLFGTTLKEVDIEQMASDSFPQIKDYLKPLRKMSKNSAKKLFDKSDYFPYKQNTKSVKFREDKINLSKFSKITNVPITKIVTLLDDKFGPEMDIGDGSHLDSETLNKIKKVVLNKPEITELSQKLHIEAIFALDKHKSQNPKVRKSQLFAKMAKKKTRPPLLCILGHVDHGKTTLLDKLRSSSAAAEEPGGITQSVGAFPVKLGSGEEMIILDTPGHEAFKSMRELGVTAVDGAILVIAADDGPMPTTVESLRLLRESKVPFVVALNKVDLPNIDFVKIKRKMADLELFSEEDGGDCTIVKISALKKQNLDELMSLAYLNAMINEPKANYSGPAKAVIIEVKTSLMMGVELNIVVLDGELSVGDFFVVGMIFGRVKKLKNSLGECINSATPGTPVTLWGIKQIPSVGQKLQVFKDSDFAKEDILRKKKILELYNYQKSEENLKEREKAKKILRAEKIQKAKEVEIKDKKIVEILKKKKNKILSKNEKKLFNEYMKQKREDFENEKRNRKEEQEINFIIKTGSRGAAETMQNLFNSLIVPDNEIKINTVKISVGTVQKADVNLAVETKAKLLTFGTEKPREEVYDLTKMKNIEINHFDVFYSISDFIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR5</accession>
    <name>A0ABV2AKR5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001957</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000578">
        <property type="protein sequence ID" value="MES1920269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12277">
        <property type="entry name" value="ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12277:SF197">
        <property type="entry name" value="CHROMOSOME UNDETERMINED SCAFFOLD_38, WHOLE GENOME SHOTGUN SEQUENCE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="2">
        <location>
            <begin position="49"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="266"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="269"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="32298" checksum="A50FED681E9DD7BF" modified="2025-10-08" version="1">MWGFSPLNRFLFRPPNPPDYTSKHFDGNLVTVEGLACLLFPKRHSRYFVIYFHGNATDLGGAFIFTEMISKVLKVTVLCIDYPGYGLSPGYSTEETVNEAAEKVYNFVHKIARVPTERIILFGTSIGTGICIDLAEKLERKNEKVALLVLVSAFTSINSVVKHKAGNFLSKMFSEQFNSVEKIGGIHSRILIFHGIEDKLIPYTQAIDLAENSNNSTLFLKEGMTHNEGYDLREDILDKINYSFNMKGPDPFNINYALFKNEFDHSESSSDSNESFLSKYSDLPED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKV7</accession>
    <name>A0ABV2AKV7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_001978</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000591">
        <property type="protein sequence ID" value="MES1920293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1390.10">
        <property type="entry name" value="PWI domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002483">
        <property type="entry name" value="PWI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036483">
        <property type="entry name" value="PWI_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018957">
        <property type="entry name" value="Znf_C3HC4_RING-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46077">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE TOPORS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46077:SF1">
        <property type="entry name" value="TOP1 BINDING ARGININE_SERINE RICH PROTEIN, E3 UBIQUITIN LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01480">
        <property type="entry name" value="PWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00097">
        <property type="entry name" value="zf-C3HC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101233">
        <property type="entry name" value="PWI domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0804">Transcription</keyword>
    <keyword evidence="8" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="11">
        <location>
            <begin position="5"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="25066" checksum="3685ED9D52617732" modified="2025-10-08" version="1">MAEKCSICLESIKNAIAVKNCHHEFCFNCIQNWIVLTLSNPERETVSCPLCKIKFSQIIRHDENLDIFEIFEVKDILNLAQKYFSENETIIGDRKEIYLTGKNTKPFPLSRKIDYFVRQYFRKNSENILNRLKPWLERELSVLTNKMENEILLNFILSNLKNFGLDENILEIELKPFLFENTNLFIKEMSVFITGNWMDIAKFDNLLRLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY0</accession>
    <name>A0ABV2AKY0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein bL12 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002009</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000612">
        <property type="protein sequence ID" value="MES1920329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00387">
        <property type="entry name" value="Ribosomal_L7_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000206">
        <property type="entry name" value="Ribosomal_bL12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013823">
        <property type="entry name" value="Ribosomal_bL12_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_bL12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45987">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45987:SF4">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN BL12M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00542">
        <property type="entry name" value="Ribosomal_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="ClpS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein bL12 C-terminal" evidence="4">
        <location>
            <begin position="113"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="83"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20091" checksum="182D70A78A911CA8" modified="2025-10-08" version="1">MNTISFNNLRRFRLLRAHKKLQINFVKLQSFSTTIEEKNFKLESDSHVEELVNHVCKLNVMEMSHFVNSLKTKLKIPDSALNSPPVSLAQPVSADKSKKVEGTGEEDDTKSYTLKLKGFEPAKKIGVIKVVRSLFSLGLKESKNLVDSAPCTLKGDLQKEEGTKFMEELKKAGAKLELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL40</accession>
    <name>A0ABV2AL40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="17">Endoplasmic Reticulum</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">ERO1LB</name>
        <name evidence="17" type="ORF">MHBO_002038</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">May function both as a monomer and a homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Lumenal side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the EROs family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000630">
        <property type="protein sequence ID" value="MES1920360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007266">
        <property type="entry name" value="Ero1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037192">
        <property type="entry name" value="ERO1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12613:SF0">
        <property type="entry name" value="ERO1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12613">
        <property type="entry name" value="ERO1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04137">
        <property type="entry name" value="ERO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110019">
        <property type="entry name" value="ERO1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="10" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 16" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="16">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045493556" evidence="16">
        <location>
            <begin position="17"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="MES1920360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="18727" checksum="D8EC487ED371733D" modified="2025-10-08" version="1">MTIIILLILLVGLHNSCKDFKVPQCDCYGTDVLEVNRHVHGILSELKKTLFFRIFKVALDEKCLFWNAQKFCVKPSCAVCPCEDGDVPQKWRDEADFLRVNRKTSIGFLPWTEDDEMWIVSPNDEKSVYIDLAANPHEDTGYGGESAHKVWKAIYGENCLHGSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG0</accession>
    <name>A0ABV2ALG0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001979</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000591">
        <property type="protein sequence ID" value="MES1920294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050699">
        <property type="entry name" value="RNA-DNA_Helicase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131">
        <property type="entry name" value="ATP-DEPENDENT RNA AND DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131:SF1">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="190"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="116"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="10"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="281" mass="32320" checksum="AA45E4C502817D6A" modified="2025-10-08" version="1">MTSEKSSNNPKKESPEKDLIPIDDINKILTTNKHFEEKNEFHTAPLFEKSDFSQNGKTDFDQKTKILQNNFIVDEPIFSIDDNNDEIKIETDEASDYETDNFVRFGNNETENNKIDSKLQNNNENSKNELKNENEIKVEKNELQNENELKPEYEWATEEKLKPNHPDFDRIEPKAMKFPFELDDFQKQAIVHLNKNESVFVSAHTSAGKTVIAEYAIAMAISHLTRAVYTSPIKTLSNQKFRDFKKAFGDVGIVTGDVSINPEASCLILTTEIFRSILYKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ8</accession>
    <name>A0ABV2ALQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Apple domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002264</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000764">
        <property type="protein sequence ID" value="MES1920613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.4.10">
        <property type="entry name" value="Hepatocyte Growth Factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00024">
        <property type="entry name" value="PAN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57414">
        <property type="entry name" value="Hairpin loop containing domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Apple" evidence="1">
        <location>
            <begin position="13"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="10889" checksum="800563AFF837C336" modified="2025-10-08" version="1">MITIVSGVDSVNKHDKRIVSETLLEIPNIGVNMCAAECLLYHDCLSVDYHIEKFICQLNTEDSEVFDAKNYKYATKSDLKSVPNAKVGHHHATVKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU7</accession>
    <name>A0ABV2ALU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PLAC8 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002306</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000789">
        <property type="protein sequence ID" value="MES1920655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006461">
        <property type="entry name" value="PLAC_motif_containing"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01571">
        <property type="entry name" value="A_thal_Cys_rich"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15907">
        <property type="entry name" value="DUF614 FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04749">
        <property type="entry name" value="PLAC8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="124" mass="13502" checksum="136260C7471065BD" modified="2025-10-08" version="1">MLGTGLSTNTDKNNKPLILGGKKQEWKYGLCSCCADPLATLSACFFPCFIQGKTYALASQNDTATVYIVVFLLVDLLGLGLCGNLYLRIKVREENEIRGSGCDDFCVSLCCGPCALVQTYRELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW6</accession>
    <name>A0ABV2ALW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002301</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000786">
        <property type="protein sequence ID" value="MES1920650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="26415" checksum="A7980D85DB5758AF" modified="2025-10-08" version="1">MSSSFEYYPLRLDQNIGCDPDEIFESDNKRTEFITCLDHPYSKTLTEYEENFDNRRAEIPKSFDTERYFSLELLAPNRTYYDQTREEYESFLKSTDKSEFFDLSIDTDSSIDQIMDENSTFYQSMNEDAFVYPSMNEDFYPQTNEYFYQQNDDEDLPIYACVSQEIFAFEDNDDSMLSSQYQDLESIKHNIKKDICRFNGCESESKDRLQNSIKARNLTLYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW9</accession>
    <name>A0ABV2ALW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">3-dehydroquinate dehydratase (3-dehydroquinase)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ARO1_3</name>
        <name evidence="5" type="ORF">MHBO_002310</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000792">
        <property type="protein sequence ID" value="MES1920659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="entry name" value="Enolpyruvate transferase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031322">
        <property type="entry name" value="Shikimate/glucono_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023000">
        <property type="entry name" value="Shikimate_kinase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21090">
        <property type="entry name" value="AROM/DEHYDROQUINATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21090:SF5">
        <property type="entry name" value="PENTAFUNCTIONAL AROM POLYPEPTIDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01202">
        <property type="entry name" value="SKI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01100">
        <property type="entry name" value="SHIKIMTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="EPT/RTPC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01128">
        <property type="entry name" value="SHIKIMATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="22961" checksum="9CE4A7B3167A8377" modified="2025-10-08" version="1">MSFSLLGLITENVIISDKYCVEKTFPSFFRQIEKTFDLKHNFRAAKMAINKKSEFNFEYCNKIIVIGMRAAGKTTLSKYAAEKLNSNFFDIDAQMEKVLNLSLNKFIRKNGWAKFRKMEIETFSAILEKKGNTIISCGGGIVETALFSKMVKNCCVVFVVRDIEKIKETLFQKEKNKRISLPNCDFLFLKKFNFFQMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM18</accession>
    <name>A0ABV2AM18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002153</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000698">
        <property type="protein sequence ID" value="MES1920489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045295541" evidence="2">
        <location>
            <begin position="19"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="237"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="29715" checksum="031664C8ADC32CB9" modified="2025-10-08" version="1">MALLLIFFFSIINTDIAGLKREFEDRCDSKKYRDDIGLDISDECKTQGASFTGMCIVIARSGYLIAEGISTQTLHSQLTVQCQMGVPDKTNVRSVKGCPNPFFGNDKVIDMRQTCFSSSERRFVYNQCNYQIKSSVKDLKFYFQSKFTTDTITYCYRGLIQPHAIVVNPAKIRGCFNETRIQNGVVISGCRSNVLDGICQYKCNLFYTNRVGKRNGVSFCTDNVVSNPPRCNLLTKAIAGILIGGSFVGFGIGFGVTVLCRNCKGRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM32</accession>
    <name>A0ABV2AM32_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CN hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002368</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000827">
        <property type="protein sequence ID" value="MES1920728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07573">
        <property type="entry name" value="CPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="entry name" value="Carbon-nitrogen hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.75.10.10">
        <property type="entry name" value="L-arginine/glycine Amidinotransferase, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050345">
        <property type="entry name" value="Aliph_Amidase/BUP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007466">
        <property type="entry name" value="Peptidyl-Arg-deiminase_porph"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43674:SF2">
        <property type="entry name" value="BETA-UREIDOPROPIONASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43674">
        <property type="entry name" value="NITRILASE C965.09-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04371">
        <property type="entry name" value="PAD_porph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="Carbon-nitrogen hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55909">
        <property type="entry name" value="Pentein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="2">
        <location>
            <begin position="2"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="386" mass="44444" checksum="F050C165DD582E0B" modified="2025-10-08" version="1">MVRVACIQFKSSKLVNPVLEKSDNLNKAISLIRMSTLNGSNIVVLHELPEFRYFCQKEDPSFFAYSVEPRKNSFDLISGAAKKFGVVIPFSFFENDDNCYFNSVVVFDADGENLGIYRKSHIPCGPGYQEKYFFRPGNTGFKVFKTRFGNIGIGICWDQWFPEQSRILTLKNADLLVFPTAIGNEPHDPSINSLPHWRRTIKGNAAANIIPIAVANRIGKEDKITFFGNSFICDQYGKVVAKSSVSEDIIYADFDFDSIKRIRANWGLIRDRRPDLYRELTSSFCKKANLRVIAEFEEHKCCHILWPVDRHNWKNDCEDARRGYGDVVMAISKYGGEVVKIWANPKDFNDVKWLYDSYENVEVHKINYDSGWSRDTCNFLLELIFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM97</accession>
    <name>A0ABV2AM97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">RNA-splicing factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">CWC25</name>
        <name evidence="9" type="ORF">MHBO_002287</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CWC25 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000780">
        <property type="protein sequence ID" value="MES1920634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019339">
        <property type="entry name" value="CIR_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022209">
        <property type="entry name" value="CWC25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051376">
        <property type="entry name" value="CWC25_splicing_factor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16196">
        <property type="entry name" value="CELL CYCLE CONTROL PROTEIN CWF25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16196:SF0">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR CWC25 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10197">
        <property type="entry name" value="Cir_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12542">
        <property type="entry name" value="CWC25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01083">
        <property type="entry name" value="Cir_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="CBF1-interacting co-repressor CIR N-terminal" evidence="8">
        <location>
            <begin position="13"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22769" checksum="5B5B683800E82807" modified="2025-10-08" version="1">MGKGGLAFLNKKPWHPASMKNMEITWKAEQKEKKRKKRIEEHLKQIKEERAVEDLKKEQIRAGLITKAESDRMDWMYQTPIIKPNEKEYMLGAPIKQENALSVLKQETESVGAKLNPTNLKGVAAVIENETKLREDPMLEIGRKARSAREEILTNPVKMKKIYDEVKLLKELKKDKRLLKVIAKKTRKKKRRSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB4</accession>
    <name>A0ABV2AMB4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-ketoacyl-CoA synthase 11</fullName>
            <ecNumber evidence="2">2.3.1.199</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">KCS11</name>
        <name evidence="2" type="ORF">MHBO_002300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.199" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000785">
        <property type="protein sequence ID" value="MES1920649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012392">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013601">
        <property type="entry name" value="FAE1_typ3_polyketide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31561">
        <property type="entry name" value="3-KETOACYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08392">
        <property type="entry name" value="FAE1_CUT1_RppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FAE" evidence="1">
        <location>
            <begin position="1"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="30308" checksum="B5AE2B3C2918F5F3" modified="2025-10-08" version="1">MRENIKSFNLGGMGCSAGLISVDLASDLLKSSNFKYALVVSTENITMNWYKGSNKVSKKTFDQSMLIPNTLFRVGGAALILTNANCRNCKMELLHLVRTHKGRDDACFDCISQEEDDKGIIGVRLNKNILKVAGKALKTNITVLAPLTLPWLEQAKYILNAFARALLERKVLKNANAQVRRVFYSLVDFLLANKSKRSFVGLSGLGRKLCMLSDEVLFKSTQKDVEDKTYIPDFTKAFDHFCVYKFYETDTRGWEGGYRSHRSEFKASV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM5</accession>
    <name>A0ABV2AMM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002523</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000951">
        <property type="protein sequence ID" value="MES1920911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="18548" checksum="2E66E4657A99D2A9" modified="2025-10-08" version="1">MSRASNRQNKRYINETEHRRRDRETENRRRDRETENRRRDRETETSRRKSKSRSIKNSHRHRTRSRSRLRNDNTKFRDDRPKVTIMRPSSRKFYKEKELSKEELDRELDQFKNQANKNRSNLFEYNIPSGDETVVKKKLDDELDDYWND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT8</accession>
    <name>A0ABV2AMT8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002592</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001000">
        <property type="protein sequence ID" value="MES1920987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="66" mass="7396" checksum="1AA444ECB8472CB7" modified="2025-10-08" version="1">MLSLTIMRRKYGPPGENVILHAVTDTKKGQEKGVKIPQVVSILLTLKKNHAQNNVEAIKKNHLCLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN00</accession>
    <name>A0ABV2AN00_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002628</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001032">
        <property type="protein sequence ID" value="MES1921027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="383" mass="43065" checksum="CFF2F13554555A24" modified="2025-10-08" version="1">MIIGIVQLLLIFNNAHKIKNLTTEFDFKYFPRELKETREEFLSKGFTKVEDANTDFSDEVVFRCSDLTNKIKINKNANEFIVDFLYYALQETLITIYGDNFGMSCVDIANWKLLNPAHCTVPESLPAPLFRADFIKYIKNKSSAYSGCESKTSPTYDLETMECQNSKITESNCSSLSSNKACGIDKLSKGLYTTQSWTTNFVSSRDYLQNSYCRKDRKNFGQITCINGAFDYEANIPEFCDICDSSKFSGRVKPSTDYKKINRTAIKYNSYICKAGCNNTQKGSVWCTDTGIKSVDACNCFCTGKGPDVKGLIQIPKNVTNEGEFMNLKCVAGFNVVGFYKCVNKSWVGSPRCVPQNISGAFSQLSTFHFLSIVILVTFCYLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN44</accession>
    <name>A0ABV2AN44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Para-hydroxybenzoate--polyprenyltransferase, mitochondrial (PHB:polyprenyltransferase)</fullName>
            <ecNumber evidence="6">2.5.1.39</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">COQ2_1</name>
        <name evidence="6" type="ORF">MHBO_002678</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.39" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010001074">
        <property type="protein sequence ID" value="MES1921090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008412">
        <property type="term" value="F:4-hydroxybenzoate polyprenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd19499">
        <property type="entry name" value="RecA-like_ClpB_Hsp104-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050130">
        <property type="entry name" value="ClpA_ClpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11638">
        <property type="entry name" value="ATP-DEPENDENT CLP PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11638:SF93">
        <property type="entry name" value="MITOCHONDRIAL DISAGGREGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="51"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="AAA+ ATPase" evidence="4">
        <location>
            <begin position="169"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Clp ATPase C-terminal" evidence="5">
        <location>
            <begin position="372"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="465" mass="53294" checksum="BCC509DEF4A2566C" modified="2025-10-08" version="1" fragment="single">GDFEMVKLLVENGADVNKTVETETNEAHFYKHYTQINFDCFRKIDRSADVNGFTPLHYAVISGNIDIVKFLIHNGADPSIACKGFGKEKPEDLLTSKTQLSVHEKNVLKTLREDADKYIHENLKKEREYRQKNPLEDILKSRIVGQIDPIHSVSAAIRRKQSGWSDDNKPLVFLFLGSSGVGKTELAKQIAKYLHPKKKEAFIRLDLSEFQTRHEVSKFIGSPPGYVGFDEGGQLTEKLRKNPDSVVLLDEVEKAHPDVLTVMLQLFDEGRITDGRGNTVNCPKAIFVMTSNLAQREIADEAESLRSNARSRTVLPQFNQKIEKEKSQILSDESTRLSRKFVEKRIYPVLHKHFHRDEFIGRINEILFFLPFNEKELKTLTSIELEKWAERAMQRHKIKITWTNGVVDLIAKGYNKYYGARSIQNEVDRKIINELAKAHDSAVIYEGCKIVLEESRGDIRIEVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN69</accession>
    <name>A0ABV2AN69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001091">
        <property type="protein sequence ID" value="MES1921111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051879">
        <property type="entry name" value="C2H2-ZF_Maturation_Protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46095">
        <property type="entry name" value="ZINC FINGER PROTEIN 593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46095:SF1">
        <property type="entry name" value="ZINC FINGER PROTEIN 593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15789" checksum="71EABC2B785C0300" modified="2025-10-08" version="1">MARYRRKKNHNKNKFWKRIRNKKPVSHIDQIQEQILSGKRYEKLKNEVDLDLPAAGQYECVQCAFNYLLSLILLFKIKILIKFFNLKRRFFSDENSLKSHKRTKLHKKMVKRIGEDIYTQKEADLAGGIGYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK8</accession>
    <name>A0ABV2ANK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002808</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001195">
        <property type="protein sequence ID" value="MES1921253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="117"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="38"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17583" checksum="79C3F92B64834AD5" modified="2025-10-08" version="1" fragment="single">ILFKFLLFSSFCCFNRKIDFEFFYLTETIESSSRGGETEISSSDGSSDESSGTGGGTESSGDEEEDGYGGDEERERAMEYVESCKMFKCVAVKIFHQRVLKSYLELVAERKQQALLAEEEYERRMTDERREKKKAKRLKYRRRRARRRGAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP44</accession>
    <name>A0ABV2AP44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002742</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001125">
        <property type="protein sequence ID" value="MES1921173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="550"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="550" mass="63659" checksum="F3888B5180CCB5BF" modified="2025-10-08" version="1" fragment="single">KSVTIDDVYDSIEKALNDKAPRVREQTLIWLVPIFQKDANKIRKNVGNLAKIAMSKFEDGSVTVRSKSHELFSILLDCDKNGNDDGYSFVGNAFIEMKRKNPRAHKTITRLRNSAKNNPNSSKESIDSISLTSPIHKKMVSPINNGENAIMKKFPSKKSKLKLLKENRNFEFPDNVLEIYGIDLLTKYAKSDDFEEKSKLMRQMKDITTSSFKDGKNFCNDFFQFLKIDLFFNQIDKTQNWSNVILDLLLMLTEIIKKAHISFDILSLEKLSICVRLFEEDQIQNDFKAFLTTVCENIGPEKVLQCFAKPFLDKMKNGFGGKMEGNFMFWVEELFEEFDIFYFGAIEENIEIVEAIMASCESEIVEKRCQKIIKHLKKSTKTTKLDKITKNKNWPKLKILISDQTWQKRLKALESIKKEIKNSQIEQIEEILPLLNERFKENILIINRQSIDIVSEIFLVFSETISPKRLEKLFRLIEEGLFICLSNSNKQIRVKAQDNLKNWLLKTGLDFAATKISKFLAQKGPKSAKAFILKLINRFVDAEKPTIFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB7</accession>
    <name>A0ABV2APB7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003050</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001440">
        <property type="protein sequence ID" value="MES1921523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00201">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.440">
        <property type="entry name" value="FF domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002713">
        <property type="entry name" value="FF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036517">
        <property type="entry name" value="FF_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045148">
        <property type="entry name" value="TCRG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036020">
        <property type="entry name" value="WW_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15377">
        <property type="entry name" value="TRANSCRIPTION ELONGATION REGULATOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15377:SF3">
        <property type="entry name" value="WW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01846">
        <property type="entry name" value="FF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00397">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00441">
        <property type="entry name" value="FF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00456">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81698">
        <property type="entry name" value="FF domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51045">
        <property type="entry name" value="WW domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01159">
        <property type="entry name" value="WW_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="WW" evidence="3">
        <location>
            <begin position="165"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="195"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="122"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="208"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="423" mass="47873" checksum="E98330413CE7A489" modified="2025-10-08" version="1">MNPTNPNFNQTSNLHPPNFPAPGNLQGAGGPQYFPQGAPPVFMQNQPPQMFQAPFHSPLPLPNGGPFHPNSSFPMQPSMIPFNPLAMPQMPFAAPSSNNFNHAPFFAPSNYGAANDVPQTDPAPSSVSQSVASYKKEENVDLSIAGSRAGSVDAPKETKKLDYTPRVSGKWIEYKTEDGALYYYDSFSKETQWEKPGEFSAEDDPVDEADKSPKVDKSDNVGEKEVAENKSAKALPKSENKGPKNDQNPIYSTFNLLSHEECVHMFNGLLEEQNIPHDAEWAGILSDIIKDTRYSAIKTLGERKKLFSEYCDKKRTAFKKKQREEMEKKVKDFKELLSQSEDLSYKTKFSNLEDIFANDARFRGLKNFEKRDIFTKFRDKLRKKQKKIDEENYKKNAPLLEKKLSKSKINSNSQWNDVCDYKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APD7</accession>
    <name>A0ABV2APD7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">TNF receptor-associated protein 1, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">TRAP1_2</name>
        <name evidence="6" type="ORF">MHBO_003067</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001466">
        <property type="protein sequence ID" value="MES1921540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019805">
        <property type="entry name" value="Heat_shock_protein_90_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020575">
        <property type="entry name" value="Hsp90_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13589">
        <property type="entry name" value="HATPase_c_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00775">
        <property type="entry name" value="HEATSHOCK90"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00298">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0675">Receptor</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="232"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="29155" checksum="21D622A31A4FC47D" modified="2025-10-08" version="1" fragment="single">MLRKNFVKFVKSSNRKTNTNFRRFYDFKAFSNPFIKSASFNAFSTTTEPNKIAQKKPEKKAIQINEKIKGKRSEEKFKAETKEILEIVSKSIYTNKEIFLRELISNSSDAIEQLRYKMRESPNDFSQNVDFKINIFTDPQNNRIIIQDNGIGMAKKQLTENLGIIAKSGSKNFMKSIKNKGDKASTIIGQFGVGFYSSFMISSKVEVFTKSWLDKSSSAFYWVSDGFLGLKIFLRYFLGLKFLMIFVFFSIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG2</accession>
    <name>A0ABV2APG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DNA 3'-5' helicase</fullName>
            <ecNumber evidence="8">5.6.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ERCC3</name>
        <name evidence="12" type="ORF">MHBO_003088</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="5.6.2.4"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>Couples ATP hydrolysis with the unwinding of duplex DNA by translocating in the 3'-5' direction.</text>
            <dbReference type="EC" id="5.6.2.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the helicase family. RAD25/XPB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.4" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010001482">
        <property type="protein sequence ID" value="MES1921559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18789">
        <property type="entry name" value="SF2_C_XPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050615">
        <property type="entry name" value="ATP-dep_DNA_Helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032438">
        <property type="entry name" value="ERCC3_RAD25_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001161">
        <property type="entry name" value="XPB/Ssl2"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00603">
        <property type="entry name" value="rad25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11274:SF0">
        <property type="entry name" value="GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11274">
        <property type="entry name" value="RAD25/XP-B DNA REPAIR HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16203">
        <property type="entry name" value="ERCC3_RAD25_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00851">
        <property type="entry name" value="XRODRMPGMNTB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 12" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="10">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="11">
        <location>
            <begin position="132"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00034617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00034808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="40366" checksum="B084995C7CF19B1E" modified="2025-10-08" version="1" fragment="single">MLAFSQRRSKESQKMIESVRSREWGLLILDEVHVAPADMFRRCLNVAKSKCKLGLTATLLREDAKISDLSFLVGPKLFEADWLELQRQRYLATVRCVEIWCPLDPLFCRQYILQRSTNRRNLLQTMNPSKFRVCEHLIRLHEERGDKIMVFSDNIFSLKKYAVILGKPFIYGRTSEAERLATLKSLQEDDEMSTVFISKIGDCSIDLPDVNVVIQISSHFSSRRQEAQRLGRILRPKARSDASAHFYTLVSEDTDECVYAARRQRFLIDQGYMFEVKNGGGLEGGFFEDEKTKKGLLKEVMAVSEKLGSIESDIEDFEKTKTPKIKKGKKTKFKSEKMKKIKESILRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API4</accession>
    <name>A0ABV2API4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003119</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001513">
        <property type="protein sequence ID" value="MES1921587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="28233" checksum="B4CC4D9DBBB5E16F" modified="2025-10-08" version="1">MSQVALNSQMQLAANEVPHEKAVKKQRRMSLFKRGYTRVMGAITRLSERTKRQRQKMVAMLVLCIFWLFFNLASTASQTWANGKAIRDSAVVDFRLGLFSFHFADCKIYKENTCINTYYIMPALCDARCPNEAIRYAFGVLSLCTASGLLSILAISIFLHVLITRKRLKGREKLAVQVSVYTGFLLNLLIVVLYGVLVYMPLNRRTELRYIFKSIEIEHFGVGWYMALATLLFTIPQLVTLMFFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT9</accession>
    <name>A0ABV2APT9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001623">
        <property type="protein sequence ID" value="MES1921679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8210" checksum="5F8FECCD5A51CA31" modified="2025-10-08" version="1">MFKPNVNSVTCLIVNSTEIKYDPVPVCSKLQCDGLTNARMGVEPKQCASKTDVGTDCNWGCAFGYVPVQSTQFHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APY8</accession>
    <name>A0ABV2APY8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003047</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001438">
        <property type="protein sequence ID" value="MES1921521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23161" checksum="D3229420ADAB2F88" modified="2025-10-08" version="1">MMFYMRMKSISKIPASVICRTSQNPLYHLKELCVRVSNKRALKLISQKCPNLTRIEICATDYNKYNSLEPILLQCRNLTSIKLHHIRLKKTSFSLLPIQIKELQFYDSEMDDNDCKKMTRFKKLENLAISGKDVTEIGLRRIAKSLKGLKHLDIAETTLNPSVCIFLSECLPLLKKLVVNPAKEGRFRTEIDRIGGSFIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ87</accession>
    <name>A0ABV2AQ87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PheRS DNA binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003362</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001819">
        <property type="protein sequence ID" value="MES1921826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040724">
        <property type="entry name" value="PheRS_DBD1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18552">
        <property type="entry name" value="PheRS_DBD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PheRS DNA binding" evidence="1">
        <location>
            <begin position="7"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15316" checksum="F5B80F8A22C14585" modified="2025-10-08" version="1" fragment="single">MASKLIIETAIIKTLQKSESVDSLKFSKENNFDHNNVVSTIKSMEAKDTIKLELIKLEKTILTDMANYILENGSPEFLVFHLIPENGILKEELTNLIISEKSKNSNEMVKNGLSNCLKLKKISISKTENGLYVTKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI3</accession>
    <name>A0ABV2AQI3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Charged multivesicular body protein 5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003458</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SNF7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001955">
        <property type="protein sequence ID" value="MES1921933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22761">
        <property type="entry name" value="CHARGED MULTIVESICULAR BODY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22761:SF12">
        <property type="entry name" value="CHARGED MULTIVESICULAR BODY PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="19098" checksum="582D31E24AB20381" modified="2025-10-08" version="1">MNFLGKFRGNKEPKPTLDSSANNLSERDNALFEKIRKLDAEISRYKTQLNNTNTASGKRAIKSRVMRLLKQREVYRKQRDMVLGQQGNIDSVKFTQDSMKDNIELVKAMKTAKKQMSKQVKKLDVDDVADLFDDMADIYIENEEVQNIMSQDCLNSINIFIKTIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM8</accession>
    <name>A0ABV2AQM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003506</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002020">
        <property type="protein sequence ID" value="MES1921981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="270" mass="31786" checksum="D8C09374EE69AB4D" modified="2025-10-08" version="1" fragment="single">EMQNVLDLFTERHNRVLFLLMLEMNLVSKNKVSHLIGNIIRDVLKYILKTAYQHKDLLCCKILADVAQTIFSENDCIYPKINSSPVYKSFDYHRMLFEIIWDEESKDNAPLKVSRSKSISNTNENVLNRSKILDHKEKLDKIIKKFISSMIINGIETEDIKNILSNILNSVFESPETQKNISEMLKHYLDEFNETKNVFAVKIEKPPIFNSKNKWKFMKRPCANYYLNKENAKIKFQLPKSFRGVRKSHLDQDIRFFNGEFVVLMVHAVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU7</accession>
    <name>A0ABV2AQU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003553</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002118">
        <property type="protein sequence ID" value="MES1922036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.1010">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="20090" checksum="413A0CC60023F93B" modified="2025-10-08" version="1" fragment="single">DNFGIENAEKLLKILQKSRKNDIEIWILSILVHLRQNKIFLAIRAFNKANEIDNSSFKLWHPTVKLSKTLLNLVKTTENEDELAILKEFAEKNMPKNIEDFARKNVEKISSVKMLVEAIKCQRILNLELNFDKVKISEKEEKEIEDGFSYISYLYEDQKEFLNSIKSILDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW5</accession>
    <name>A0ABV2AQW5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Metal-dependent protein hydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003586</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MYG1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002172">
        <property type="protein sequence ID" value="MES1922067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003226">
        <property type="entry name" value="MYG1_exonuclease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11215">
        <property type="entry name" value="METAL DEPENDENT HYDROLASE - RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11215:SF1">
        <property type="entry name" value="MYG1 EXONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03690">
        <property type="entry name" value="MYG1_exonuc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="196" mass="22566" checksum="3C688623358825F7" modified="2025-10-08" version="1" fragment="single">ISLSFKRMIIGTHSGSFHCDEALACFMIRNTEKFANSTILRTRDEKVLETCDIVVDVGGVFDLKANRFDHHQKEFNETFDDESQIKLSSAGLIYKYFGKEVIKNLSGCDDENLDLLYRKTYSGFVKAIDAIDNGIDPVKTNEKPLYKISTDLSSRVGYLNPKWNEDYSEKIQMKRFEKAMELVGKEFKESIKFLKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA7</accession>
    <name>A0ABV2ARA7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Exportin-7/Ran-binding protein 17 TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003727</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the exportin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002403">
        <property type="protein sequence ID" value="MES1922218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057947">
        <property type="entry name" value="TPR_XPO7/RBP17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044189">
        <property type="entry name" value="XPO4/7-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596">
        <property type="entry name" value="EXPORTIN 4,7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596:SF2">
        <property type="entry name" value="EXPORTIN-7 ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25795">
        <property type="entry name" value="TPR_XPO7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Exportin-7/Ran-binding protein 17 TPR repeats" evidence="8">
        <location>
            <begin position="112"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF25795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="31352" checksum="41955529D883747B" modified="2025-10-08" version="1" fragment="single">IMKNLNIFNEFCLMLTSICNNCQINLMVKLPNYQDWINNIAKFTATAFNIHNASTNGIHYLLMLWSKFSSSIIYFRNKTPEFLRDFVPQITIEFMNANLSHLANQIKENTDFDSLLNEVEMTSIFQFLPSLFHSDYENSINWVKKKFDGHFAQLQSVLNGSVRPNSTNNNQLQIIEVEMAWIVYVVAAIISGDVAFTVTQSKNKKLDAAISSLPLKIVPYTILRSKNMFENGLEATPLLERALLCFFKNFQKSHIQIYIYKPILDPVDKDLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC3</accession>
    <name>A0ABV2ARC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003715</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002382">
        <property type="protein sequence ID" value="MES1922204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052214">
        <property type="entry name" value="DAG_Lipase-Related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45792">
        <property type="entry name" value="DIACYLGLYCEROL LIPASE HOMOLOG-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45792:SF8">
        <property type="entry name" value="DIACYLGLYCEROL LIPASE-ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="18767" checksum="7203AF0C3FB7C09E" modified="2025-10-08" version="1">MKLLNLYIKYAIAVYGIFAILLDTSKTVPFVCPCIPPKIKEDVIDSSSHNYASIKIFLDISGIDKDDLLLYSFNSNLESCNFAVVLDRANKTVIVAIQGTTSLRDFLTDLNVNKEVIDPGLALGYSGIHYAHKGILRAGNWILGRLTNSETVVREMESNKIVTIGHSLGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG6</accession>
    <name>A0ABV2ARG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Something about silencing protein 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SAS10</name>
        <name evidence="6" type="ORF">MHBO_003769</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SAS10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002483">
        <property type="protein sequence ID" value="MES1922261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018972">
        <property type="entry name" value="Sas10_C_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13237:SF8">
        <property type="entry name" value="SOMETHING ABOUT SILENCING PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13237">
        <property type="entry name" value="SOMETHING ABOUT SILENCING PROTEIN 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09368">
        <property type="entry name" value="Sas10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sas10 C-terminal" evidence="5">
        <location>
            <begin position="225"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="187"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="9"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="188"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF09368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="35363" checksum="40E2CDF42B5C199D" modified="2025-10-08" version="1">MSESEEIDQNNAQNFNNYIDSQDSESDEYQDFSVNENIPKTKNREDLWGRKKSLYYEEDDLITSDEDKLKEEEDEVEMLRKMEYEKLSEDDFVDDEETQNFILGKMASGNFDKSVLKNNKQISKKDEKDETIFEKLKKLGKPENDIFKNRKIGGKIGISDYLLKQINPKIDIIDKNFFDNLRNETKQKNQISDENSKNVNDINLDEESNQRKFSQTENSEENDRKRRKITEKMRKNEGLKRYRSKKFKNARTKTREKWRRKQIRVKGMRPEYKPLKKSYIGEMTGIKENVVKSIRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH3</accession>
    <name>A0ABV2ARH3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPL10A</name>
        <name evidence="5" type="ORF">MHBO_003562</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002137">
        <property type="protein sequence ID" value="MES1922046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00403">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050257">
        <property type="entry name" value="eL8/uL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002143">
        <property type="entry name" value="Ribosomal_uL1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023674">
        <property type="entry name" value="Ribosomal_uL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028364">
        <property type="entry name" value="Ribosomal_uL1/biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016095">
        <property type="entry name" value="Ribosomal_uL1_3-a/b-sand"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023673">
        <property type="entry name" value="Ribosomal_uL1_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23105">
        <property type="entry name" value="RIBOSOMAL PROTEIN L7AE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00687">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002155">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56808">
        <property type="entry name" value="Ribosomal protein L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01199">
        <property type="entry name" value="RIBOSOMAL_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25076" checksum="EFB39F3A3AD5A892" modified="2025-10-08" version="1">MSTISNDTISKAITEITEYAKTTKPRNFLETIEFQFALKNFDPSRDRRIVGSVQLPHIAKPKFKVCLLGSAQHCNEAKVIGIDSLNEEDLIGFKKNKKKVKKLAKKYDAFMASSDLIKKIPKLLGPGLNRAGKFPVPIDSSETVADKLKVVKSTVKYNIKFKSGMPMTLNFPFANVKMSNEEIVPNAQVALSYTIDQFKTKMNNVRRVHVKSSMGKPKRVYGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH6</accession>
    <name>A0ABV2ARH6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HECT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003802</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002535">
        <property type="protein sequence ID" value="MES1922293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2160.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2410.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042469">
        <property type="entry name" value="HECTD3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46654">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE HECTD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46654:SF1">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE HECTD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00632">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00119">
        <property type="entry name" value="HECTc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="HECT" evidence="3">
        <location>
            <begin position="76"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="2">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="26834" checksum="528DF9E384DFD2D7" modified="2025-10-08" version="1" fragment="single">SIDSGFEARLKALEKVAAGDNSDFASLQPLTFTATLLDGSETPLKPNGALIDVKESQCGHYAILLQKARRDESRLQIDAIAAGLATIVPASILRFFSAEELEKMVCGNRRIDLRVLRENTRYRPPSIEESDQIKWLWVALEEFGQEDRQRFLRFVWGQSRLPLSREGFKEKFVVCLREEQFDESLPASHTCFFSLDLPKYTSKNVLKEKLLYAIRNCQEIDTDFIPRNVAWEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM7</accession>
    <name>A0ABV2ARM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002551">
        <property type="protein sequence ID" value="MES1922302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="41"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16667" checksum="787EBFE547726D88" modified="2025-10-08" version="1">MAGDNFAEDVRKKDSKGDEKAKENEIDLLDIELEGGDFTERFQEKDGVDKNDGRASASNSLDLIDSLSPSFDKLQIEGDPKKAAKNLFETENYKTKSSEKDVLAKSQNIADEKLKQMIPGSDLVDLEGLMKRGSKGTFRSKDKKRMNQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS9</accession>
    <name>A0ABV2ARS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Exportin-7/Ran-binding protein 17 TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003699</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the exportin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002357">
        <property type="protein sequence ID" value="MES1922184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057947">
        <property type="entry name" value="TPR_XPO7/RBP17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044189">
        <property type="entry name" value="XPO4/7-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596">
        <property type="entry name" value="EXPORTIN 4,7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596:SF2">
        <property type="entry name" value="EXPORTIN-7 ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25795">
        <property type="entry name" value="TPR_XPO7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Exportin-7/Ran-binding protein 17 TPR repeats" evidence="8">
        <location>
            <begin position="13"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF25795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="32078" checksum="B386246AF123BE2F" modified="2025-10-08" version="1" fragment="single">FFGILSKELNEKVDQDFMMKLILEKLLGNLCFWSKNLQIVHKSIEMIDLITKGYESYKVSSKCQVVQNLLENNFADMKPFLSYPRNFKERTLFYSIFTRFVVNEMDEKKFEHFLKPFDETFLWLSKRNDFNSPETVHTTIGLFRDLKGVCLTTTKKSKFLFFKKKLAKKFLIKNRKLFNQFFDWFHWKHFDKFMLLFEVHSITPEVATPMLRFLSEFVYNRGYRLNFSGHSTYGHHLFRSAQKALSTYGTRLSSISTENVGDSSHIYKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY4</accession>
    <name>A0ABV2ARY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003751</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002458">
        <property type="protein sequence ID" value="MES1922244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9732" checksum="033EBBC7D1662D2A" modified="2025-10-08" version="1">MAEKSEITKMPKMEKMAKSEITKMPKMEKMAKSEIIRENGVLMTENKRIEAISVKRKIDLEEKLKEELMNRRKREFLNKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS70</accession>
    <name>A0ABV2AS70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004029</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002993">
        <property type="protein sequence ID" value="MES1922513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045610884" evidence="1">
        <location>
            <begin position="22"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="9005" checksum="62032EC13725F2D8" modified="2025-10-08" version="1">MKGLLTITILFFHCVKPYTVALVVNQQYVTFCVHEGNHEKSRTEIMKHIKEANEFAKENFDVVILTGPFRFLEENVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS74</accession>
    <name>A0ABV2AS74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004040</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003019">
        <property type="protein sequence ID" value="MES1922525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="21019" checksum="7DDBC69C46F4E938" modified="2025-10-08" version="1">MEVYLFLFNNLSFTFPQCFSDSNFAKNYSIHDNIVLAFSDEHILDSIVLLSQQKFKGENVKIALLLMEIIFNVLNLESNKLNFSQKINKLSKLREKEQFKNKNIKNRSSNWNSQFVLSKNDGKNILGTSPEKLCNKKIKRLKTRSKTKKQQKRIYLNENVKTTIEKFVSQLISTKALNSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS89</accession>
    <name>A0ABV2AS89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003823</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002573">
        <property type="protein sequence ID" value="MES1922316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003888">
        <property type="entry name" value="FYrich_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05964">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="23077" checksum="3E3F2746C077CE13" modified="2025-10-08" version="1">MRSDKTFLNLFKKINEKLPKDSKIVSRLELVVSDVFSKPKMAFSLENIRPPSGPVPKKNKNVKKKGSDNQAQIIDLVDLSSDNDVFRKKKKKFPIKIGKNFKILSIGKIVFDNNKWHTSRFIFPNGYKILFMKSGENKNDDKKKKAEQKKQAVNKNGVKNEITKKILKRKIVDNKGQFKTYFFRNKNLSKIKIYPEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU4</accession>
    <name>A0ABV2ASU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protein transport protein S31</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SEC31</name>
        <name evidence="5" type="ORF">MHBO_004268</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003560">
        <property type="protein sequence ID" value="MES1922745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040251">
        <property type="entry name" value="SEC31-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13923">
        <property type="entry name" value="SEC31-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13923:SF11">
        <property type="entry name" value="SECRETORY 31, ISOFORM D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <keyword evidence="2" id="KW-0853">WD repeat</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="25924" checksum="35B062A5809F0ECA" modified="2025-10-08" version="1" fragment="single">MICKKIKTPANIAWSPSQHKSLIAAGTSQGLINDDFQSFSKLEIFSANNTQQQALVSIPTSSSFSCLAWGAVDQGSTPMGLICGGTDDGSLSVWNPSLVLDSATEQPLSAIPEKDFSRVAQFDSENLSPTVVAFGNGEQSHSIAVASSSGEHISIFDLQSLGEAASLPIRELPSSRQLASRVKSGVEALRWNKRVPQILAVGNSNGSTVIWDLRHNKIAMALKAKSFLPFRNYNKIFCEIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU8</accession>
    <name>A0ABV2ASU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NADH dehydrogenase subunit 4L</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004267</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003558">
        <property type="protein sequence ID" value="MES1922744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="53" mass="6001" checksum="65B3FCF255D3712E" modified="2025-10-08" version="1" fragment="single">MDAVFTMALASGIFAVDHLSILANKNLYDLIWFCLLRRMITIINKCMAINIPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT35</accession>
    <name>A0ABV2AT35_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Activating signal cointegrator 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">TRIP4</name>
        <name evidence="2" type="ORF">MHBO_004362</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003844">
        <property type="protein sequence ID" value="MES1922835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009349">
        <property type="entry name" value="TRIP4/RQT4_C2HC5_Znf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06221">
        <property type="entry name" value="zf-C2HC5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TRIP4/RQT4 C2HC5-type zinc finger" evidence="1">
        <location>
            <begin position="19"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17123" checksum="6BA0CA5515BC3312" modified="2025-10-08" version="1" fragment="single">GRNNKKKTRKRGEKETERKYCNCQGTEHPAIINCTECGNIVCSIQKLGPCFFCGSIVTLEKTIPLNIEKEAENRVENPNFETDKTDKISLLIDDQGDFYSETENLENDIFKELETASEVSFFDKPIPTKQFLSEKYDNRANEVRANLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT70</accession>
    <name>A0ABV2AT70_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Natural killer-tumor recognition protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003281">
        <property type="protein sequence ID" value="MES1922631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="122"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="133" mass="14933" checksum="9145CB94AAED00C0" modified="2025-10-08" version="1" fragment="single">ENTASDEKSGKHRKKKHPSQRKKKKVDYQKKKGQLISKPANDKLNESKTSTSQRVVDKPSSTADVQKSQDKQDKTEENKKLRSQTFKANKEEEKDSKESKGHHGPNDKELPQTSTSGGSSAQDREMVDSKPGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL3</accession>
    <name>A0ABV2ATL3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004256</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003535">
        <property type="protein sequence ID" value="MES1922733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15553" checksum="DDE734FE1C5EFEAE" modified="2025-10-08" version="1">MQDYYLARRKQNGDEKYRAQVTRERISRKKAFLLRKNGQQTCGENKEVDEKVREQCENLRENPPPLELDRKKWDKNQKSGKLKLPVGADQIKIAMTDIDSGRTIESGMLDQLMRNRRSCVFDLLNKIIELNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR6</accession>
    <name>A0ABV2ATR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004317</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003731">
        <property type="protein sequence ID" value="MES1922793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046828867" evidence="2">
        <location>
            <begin position="21"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="25378" checksum="C3A6FD652DB6FF49" modified="2025-10-08" version="1" fragment="single">KVCLLVFLLITPFILHSGRTRNLITHGNFDYYDSFEPWTLLYNGKEVNCLKQKPNFLPNSPLCWLSITSGEHNVKDLTILIPEKGDVKLKQTTKIKSASKSLYAFTSIMSITKSPKEKTLARMIVIQKDENGVILRTTKSDKESLSTEKTLYEVEFKVDKNTKIFDFEIELESMGAVELNNYKIETLMPIDVKQISVIILSSLLFGIFSIWAVQYLRDRNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU06</accession>
    <name>A0ABV2AU06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004650</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AB hydrolase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004711">
        <property type="protein sequence ID" value="MES1923109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46118">
        <property type="entry name" value="PROTEIN ABHD11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46118:SF4">
        <property type="entry name" value="PROTEIN ABHD11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="3">
        <location>
            <begin position="20"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18460" checksum="A20DDCFADCD737AA" modified="2025-10-08" version="1" fragment="single">MSLNAIKYNCLTKTDKYPTILIHGLLGSSNNFMSFVKKTKLLKIMDFYSIDLPNHGKSLKISQNFNLENLANHVADFMEQNNIEKANLIGHSLGGKVAMFLALKNCEKVEKMVIEDISPVDKYEKDSSNFKYFIECFRKIDFGTIKNRKEADDILAKYIHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU34</accession>
    <name>A0ABV2AU34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004724</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005007">
        <property type="protein sequence ID" value="MES1923179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17825" checksum="90B10FA6560B94FA" modified="2025-10-08" version="1">MASKKLLEIKSKYDKLKLVNDRLKLQNKRIFDKSFKFPGKNLKKDNEDLQRIRAKLSSSLKQVLEAKYKNSKDVRKHKIFDTFDIKKGNNADQTISALKNATETVDSISENEDFVFLALAQTETALQYTVDYYEDNFIVVLTKLAKYFNEKDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU49</accession>
    <name>A0ABV2AU49_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferases group 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CASP14</name>
        <name evidence="3" type="ORF">MHBO_004739</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005058">
        <property type="protein sequence ID" value="MES1923194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032171">
        <property type="entry name" value="COR-A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16095">
        <property type="entry name" value="COR-A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="COR" evidence="2">
        <location>
            <begin position="7"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="26208" checksum="AE1F048BA828814C" modified="2025-10-08" version="1" fragment="single">MEFEIQTKKSTHRIEDVNKIMPEMQGIEDVYDMLRYYHDAGKVLYFNETDLADFVILDVQWFVDAFQFIITDKLHMKGIKGRMQDWEEYYQTGHLRDGLLTDIWRKRDLDLHKELLENDEVAIEDDIANDSRYLLPYKDTILMFMTRLGLVAVGEEFHYVPCINKKEIDSRLANIIRESKQKSSVLIFQFDFLPYFVFYRLIVSCMQEMRWKVLESEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF8</accession>
    <name>A0ABV2AUF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquitin carboxyl-terminal hydrolase 20</fullName>
            <ecNumber evidence="2">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">USP20_2</name>
        <name evidence="2" type="ORF">MHBO_004550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010004381">
        <property type="protein sequence ID" value="MES1923017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02257">
        <property type="entry name" value="Peptidase_C19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050185">
        <property type="entry name" value="Ub_carboxyl-term_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646:SF86">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="27135" checksum="4C968312F1D43B5C" modified="2025-10-08" version="1" fragment="single">MALNKIIDNFIANPSNSREKRDSIVKDLFHGILIGQVECSRCNRVSQTRSQFSDLSLELPVAQEKSSFLGSIKKFFGDNLPPVTIEECLSHFCKTEGLDEDEMYFCRFCAKKVAAQKRFFFEKVPRTLVIQLKRFASKRHGHDGHGDMTKLRNHVAFPADDLDLSSYLFENKSGNGEGDGQNEAAKTKNTRYSLSSVVVHEGDGHSGNYISYCKNPVTGKWHQMNDRFTKAAKEEDVLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG7</accession>
    <name>A0ABV2AUG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Positive regulation of GTPase activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rgs-4</name>
        <name evidence="2" type="ORF">MHBO_004848</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005489">
        <property type="protein sequence ID" value="MES1923297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07440">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845:SF192">
        <property type="entry name" value="DOUBLE HIT, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845">
        <property type="entry name" value="REGULATOR OF G PROTEIN SIGNALING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00615">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01301">
        <property type="entry name" value="RGSPROTEIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00315">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RGS" evidence="1">
        <location>
            <begin position="36"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18782" checksum="CC2E4BBB84311230" modified="2025-10-08" version="1">MMLTYSYMFFSYTMIGLFTFLNTKQYFSKNDNLHTALEKTLEDSFLKEKLKMHLAKEFNAENLEFIESARRFKDNFNDSLNSDRARLQFAWCIYSHFISENSPFQVNLSGSTRETIVEKIEKSLVSRNMYDKAEKEVFTLLKNDSFRRFSNINGELLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG9</accession>
    <name>A0ABV2AUG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004872</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005599">
        <property type="protein sequence ID" value="MES1923316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="14224" checksum="F5EBA88A5770E827" modified="2025-10-08" version="1">MIEGVQFWPPGYSKSLSKQLASNSVVDFRDKKLKACHRVNRQCEDIISNTCESDCPNNYFQVVDFNCPQGGSKYCGKIDCGKVGQPACLRGLAHAAASESEDICHANSPAGFCMKGLKMRCGPEKILICE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH0</accession>
    <name>A0ABV2AUH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004821</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005403">
        <property type="protein sequence ID" value="MES1923274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15369" checksum="C2C5E45DD3B3326F" modified="2025-10-08" version="1" fragment="single">MERYEELAQKNYNKYIKMRILEPNVETQGITTQSSADFFGLQNGERGLRVVKDVGTLKADDVIVKAYGFPLNGDGSFIDNIFKNNPEEVPFSYRVMCMMLSEKHPYMDFEVVRNVGGKQERTNVRHMCSTSSDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI9</accession>
    <name>A0ABV2AUI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004896</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005684">
        <property type="protein sequence ID" value="MES1923335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="9089" checksum="33690EBB214755DF" modified="2025-10-08" version="1">MSYIGRNLYSCEEWRYRTHPTLCRCRYKSFMRRLVLELPEAEVLVLNTAFKFKRFQYILELLVLASIRLVSIVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ4</accession>
    <name>A0ABV2AUZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005071</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006446">
        <property type="protein sequence ID" value="MES1923495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050817">
        <property type="entry name" value="DjlA_DnaK_co-chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24074">
        <property type="entry name" value="CO-CHAPERONE PROTEIN DJLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="110"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="22540" checksum="740E102A05273EFA" modified="2025-10-08" version="1" fragment="single">ISFFVTTLSLISVVSKQFKVNQLKFEEQFKRFFETAKTIKKQNFYQNLFLFQNKNENDYHKWFRENSFEDFRRRNSKFDKFGNSRFGRKKFKNDESGRFGDFEKSVLDRHLYGILEINSKANQRQIEKSFKVLTLKWHPDKFANKSKKDQRMAETKFNDILMAYNVLRDSAKKRHYDLTGETDSKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD2</accession>
    <name>A0ABV2AVD2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleotide modification associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007228">
        <property type="protein sequence ID" value="MES1923620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011630">
        <property type="entry name" value="DUF1599"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07659">
        <property type="entry name" value="DUF1599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleotide modification associated" evidence="1">
        <location>
            <begin position="9"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="17997" checksum="665C3DB8A79CF423" modified="2025-10-08" version="1" fragment="single">MPNAILVRLFDKMLRLETLLNGAEQQVSDESIDDTLFDLANYALMELTERSAEQSGIEESTKDNTANKFWEKNQVINCAKVVESDQFKKPFDWDAFNAREFVVHCKTIKEAANFIAQCKGKNKCWEKRGNSQWAIYEEKTCYSNRGYNDVENYKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWK2</accession>
    <name>A0ABV2AWK2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005222</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007211">
        <property type="protein sequence ID" value="MES1923617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13919" checksum="29E0695D5ECA3515" modified="2025-10-08" version="1" fragment="single">MQLSNSNWYTIIKWDNHVLSVDSHSKRPLYWVEYPLKDECGEPYSIRDEARVVGKRLEHARYLLHEAVHMTARPPWLVINDSMTEMGEIALHPDGVTVMDSGNGPGSATGDIRKLSDLTNASQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE22</accession>
    <name>A0ABV2AE22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Large ribosomal subunit protein uL30 N-terminal eukaryotes domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000024</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039699">
        <property type="entry name" value="Ribosomal_uL30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012988">
        <property type="entry name" value="Ribosomal_uL30_N_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11524">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11524:SF16">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08079">
        <property type="entry name" value="Ribosomal_L30_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL30 N-terminal eukaryotes" evidence="2">
        <location>
            <begin position="17"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1917988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14217" checksum="7E13037FE6BAEA1C" modified="2025-10-08" version="1">MAQIKVEKNENLTLSTPESLKKKNARDEKLALANSNRVKKSNLKDKRNKKLIYKKAEKYANEYIEGERSLEELRKNAEKEGKFFVEPEANLLFVIRIRGFSILKFEILKMTTTNFHQNLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEI9</accession>
    <name>A0ABV2AEI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000140</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="60"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="83"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13930" checksum="978A8FB5BD0523F5" modified="2025-10-08" version="1">MDSLYELKTYIEDLFGTENATHWLFIFAFAFLIQIAVSYFFSNRAPLERAESAKEKSSGETESASLSGESSEDLSVDDSESADSTKKSSEDLKGEEEKSEKTVQKENQKAENRVRARRTRRAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEK3</accession>
    <name>A0ABV2AEK3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein yippee-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000155</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the yippee family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034751">
        <property type="entry name" value="Yippee"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004910">
        <property type="entry name" value="Yippee/Mis18/Cereblon"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039058">
        <property type="entry name" value="Yippee_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13848">
        <property type="entry name" value="PROTEIN YIPPEE-LIKE CG15309-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03226">
        <property type="entry name" value="Yippee-Mis18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51792">
        <property type="entry name" value="YIPPEE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Yippee" evidence="5">
        <location>
            <begin position="13"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU110713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13347" checksum="8AD9D90922318233" modified="2025-10-08" version="1">MGILKINYLFDDKVYICAKCGIHITSKKYLFSTKFKGRFGPAFLFNRVFNVDLGPEEKRTFLSGDHIVKDVFCLNCGLIVGWFYTKAFENSQFYKLGKCCIERNLVVKKRKNYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEU4</accession>
    <name>A0ABV2AEU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000218</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000028">
        <property type="protein sequence ID" value="MES1918215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="72"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="289"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="337" mass="39476" checksum="32CC53B36AAEB5C0" modified="2025-10-08" version="1">MDLTSNKLYKGLVDKLNLTNDEISQDLISLTNSTATVRKLRPRIDRMPSKFDKNYALNIADGNNFNNEFNTISELSSNYNKALNKRKFLKEKREEIVNDIALINSNINSLKKEILFLLLYKQKKRKKFENFEQTMSKIERKVKNSSLVKKEKSNSSKKIFKYKAKNDGIDSDSKEGKFPPKNRNTKNLKLKNNLNIKNDHFKNPKNGKMINSELRNDELENKFFEYEIKEFVKKCEKLNECLNKFESIEKMFVQKEKENDLLAMQKSLAILSFQNHSVTEKITILKAGNKQLTEKLLLANQNLEEKDKKLLEMEENIAQLQAENFKLKTERISSELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL0</accession>
    <name>A0ABV2AFL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exportin-2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CSE1L</name>
        <name evidence="2" type="ORF">MHBO_000427</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000065">
        <property type="protein sequence ID" value="MES1918461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005043">
        <property type="entry name" value="XPO2_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03378">
        <property type="entry name" value="CAS_CSE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exportin-2 C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="29914" checksum="2147BF4BC6944CE3" modified="2025-10-08" version="1" fragment="single">VKPLSTLLVEYLSKSETQIKNYLEPLLGVFQKLLSQKSNDYHAFTIVLAILECFQINEIKKYLPQILKLVCVKLDKDRSARFISKFSEFYCSFVALVGFDLAFEATESVQKGMTAMLLENVVLANIKSLDGNKQRKNCALGMTEMVTAERFVRNFSEEQIIILLKETISIIELPPVFSMKNEEELENLERTGFSAQYSNLIFAAYKQHDPLSKLGEAKKLLALKLSSLSKKVPNKLGNLIDKSLSENQKKILLGYLKESNVSLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFN3</accession>
    <name>A0ABV2AFN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000431</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000067">
        <property type="protein sequence ID" value="MES1918466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19482" checksum="FE4BF72D284E110B" modified="2025-10-08" version="1">MVSPEALRVVIYRNVRLLRVHLCELGDRKAPRVRSRPEPDVSLERVHFHRHFDVFVRADYHVHALDYFPEILIRVFEVNFSLDENAVDFVEEEHRADSFGYCLPQHRLRLDAHALDAVDDDQRAVGDAQSGGHFGRKVDVARRVDEVDELGLSEKTYSCSFLFSSTYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP5</accession>
    <name>A0ABV2AFP5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UBP-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000432</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000067">
        <property type="protein sequence ID" value="MES1918467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001607">
        <property type="entry name" value="Znf_UBP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24007">
        <property type="entry name" value="BRCA1-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24007:SF7">
        <property type="entry name" value="BRCA1-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02148">
        <property type="entry name" value="zf-UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00290">
        <property type="entry name" value="ZnF_UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50271">
        <property type="entry name" value="ZF_UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="UBP-type" evidence="3">
        <location>
            <begin position="186"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="294"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="426" mass="49798" checksum="2C44C330DA3D58C7" modified="2025-10-08" version="1">MLLIAICDLTNAVKNDHCINISANYRIFSLNKDKNPNEANNPAIFYFSENIDLINYLKQQQKHTLKILRLKTANRNCLFALLKRNKISSPLKTFEYLLQNNKVQKKTNIDPLAKPILCDLRIFENNKNVVDFKKIKILSQITKINAFPKNELPNCPNCYYRLDGSIIGNFELAKINDKILLKSNKKSCQVCKVLEEEKMECINCENNEDLWVCLICATIGCSRYQKQHSKKHFEKTGHRYTIKMPNKAVWDYETSSYVHKLIGDEHKNDTNEETFDIMNAKTESISCSLNELLCKTLEDQNDYLEEKLEKSRIEEKNKTLLILEKIEKQKLKIGEEQKKLEKAKRYFNSLCKKEQTAKIRNNTKVKNAADLTEENRILIKTKKDFRNEIDIKENAILDQINQKTAKFDQIKARLENELNSLLSKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ4</accession>
    <name>A0ABV2AFQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000457</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000071">
        <property type="protein sequence ID" value="MES1918493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052575">
        <property type="entry name" value="SSU_processome_comp_20"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17695">
        <property type="entry name" value="SMALL SUBUNIT PROCESSOME COMPONENT 20 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17695:SF11">
        <property type="entry name" value="SMALL SUBUNIT PROCESSOME COMPONENT 20 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="589" mass="68430" checksum="94CFB58C953388EE" modified="2025-10-08" version="1">MANLAKMALGKISKNDYSKMEKGKRKDVLDFLLKFSKKKNGVNFLVENKTIFGICCKIIENRQKSDFDNDKQNKDRNLKFCYKNDYLDCAFEILTNIFDFYNENNNVQILNRKKKIPKNIKTETPKILFAIFSRIKSIKNEKSKIHKEIDLILKLFNFLEIEDDFRRTTLNLLQILDYKKLNFRISKNFRETTFEENSCEESRLDKIVNCILTANSKIDDKNISLKLWTFLSNNIEETENLSKTAKRIKILSGGLNFDSIGDFVEGLCSFITVGKIDPEIDYERRTKTYFEIKKEMPNLMKSEKVAITPCLNLFFRDLNSDDFGLRNQAVIVIKDICRFLKNGDENIKIENGNKNDIKNSIKKMIVNGLSLKNSKLETKMACMEILRQMLEHKNGVFGDLAKLLNVENEDLDFFVNFFHIQTHRRRKAILQLQKMAKSCFSGKSENGENSKNGVSKLKNGFSSESVSKVLVPLLLHHIINSNAKTIVFNQIPKSISNFKLKKSLREEGLKTLTPLSSFLEWNSTMKWSNFFFKKLKENLSNEKTFVSCICAIIESSQFENSNNLAKINFDKNFFRNIVVSLIDRNLKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ4</accession>
    <name>A0ABV2AGJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000677</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6254" checksum="B35EF47CD5842C97" modified="2025-10-08" version="1">MDKVTGGSRIVAVALLVVLGSRLLDENRERYKKADGFLERLINLLQPQKQSSAVAAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ7</accession>
    <name>A0ABV2AGQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000696</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000126">
        <property type="protein sequence ID" value="MES1918792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11017" checksum="8A10B400884AC87C" modified="2025-10-08" version="1">MRAQTNYIGTKTGWSGSRSSPVLENAVKRAFDILKVPRDFAFAQASENVQFYLFDAESKNVTVHEFLGKECGLRSVRNGNNRFATVFVCLDVVNNGFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS9</accession>
    <name>A0ABV2AGS9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000090">
        <property type="protein sequence ID" value="MES1918593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6480" checksum="DB301894C3B61098" modified="2025-10-08" version="1">MFEGYKCADENNRYEINKKLKELVEAFQTLRRSENSKKKKLNAFKKILSPKSFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU3</accession>
    <name>A0ABV2AGU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000437</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000068">
        <property type="protein sequence ID" value="MES1918472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="102"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="109"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="21616" checksum="2CDE7A699C2229AD" modified="2025-10-08" version="1">MSFGNVIKQTNLFCEEKGLQISGCNAEPQDLNSDTFCKSDCFNNFSINFEVSTSDINKDEIHEIINEIETTDIIKHNINNKNSTTNIGNSEENTIDYNENEDKRKYDNNENNTTSNEKNGENTTDYSYSKDNEINFGKNENKDETVLHQSALIAIISILTLTVIGLSLYILFEKRKMFKLRHCQLIEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGZ9</accession>
    <name>A0ABV2AGZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000831</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000162">
        <property type="protein sequence ID" value="MES1918946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.680">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013924">
        <property type="entry name" value="RNase_H2_suC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08615">
        <property type="entry name" value="RNase_H2_suC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13308" checksum="C0C156B8259431E3" modified="2025-10-08" version="1">MEISGDDYVHKLPFKIERKGDFREGENSVFEEAQIKEDGKYETTYNGRELTGKIIKLNDNLKTKTFLVKENNFSASKKSLNLVNWDRDKDDFLMETSLGETINEYFDVIDILND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH02</accession>
    <name>A0ABV2AH02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000807</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000154">
        <property type="protein sequence ID" value="MES1918917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="59"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="96"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12502" checksum="3B99EEE094A10C4A" modified="2025-10-08" version="1">MDDGFILKTRSNSIRMKKIDKNIVDNGEKTDKENNKDKNVVADNKKEKANSDKMDNKEINVTTINTETENFENNKDESLSDKNFVTDEKINMPKDKNKKKRKFNKKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH13</accession>
    <name>A0ABV2AH13_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005282</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000162">
        <property type="protein sequence ID" value="MES1918947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="72" mass="8730" checksum="1041D99CB00CB195" modified="2025-10-08" version="1">MAELYWFLIIFIPLMLYWFAVPRQKPTFLRNVPKKLYFSPGTTFEDLAKFRFFKIGEGVVAINWITTKVFWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH22</accession>
    <name>A0ABV2AH22_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000792</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000151">
        <property type="protein sequence ID" value="MES1918897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="33867" checksum="B137351B69AF8CF4" modified="2025-10-08" version="1">MCQIRKKDIFQRNLSNFIYAKCTKTKINFDIPVKNIKYIFNKDVDILLLDQIPQITSLYKDEILDIIKNTFLKFEKFRTNELKPLTMYKISDYFPRILENESFNKDLILYVISEKMRQHPKIQLIGKNQFRIKDANEILITNLFAESASKSAMKSNIKIREKIAEFRKNSFRDYSNLVKFCRSNHIKTPEFFIDLMHKLAITDQFYGQKRNLNLAAKYFSISASDNLSKCAVVNKCVNFLEKMGIFEKYENLSYLNYPFLKMPDKIESMDLGFEQINLRRYDRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH55</accession>
    <name>A0ABV2AH55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">TATA-box-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000889</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000178">
        <property type="protein sequence ID" value="MES1919011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.10">
        <property type="entry name" value="TATA-Binding Protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000814">
        <property type="entry name" value="TBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012295">
        <property type="entry name" value="TBP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10126">
        <property type="entry name" value="TATA-BOX BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00352">
        <property type="entry name" value="TBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00686">
        <property type="entry name" value="TIFACTORIID"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55945">
        <property type="entry name" value="TATA-box binding protein-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="211" mass="24027" checksum="C2F34563444BBB6F" modified="2025-10-08" version="1">MVEKTNFEDLSDLEDFVEDKAPTVRTERIKNFKWEKEPEINNVFAEAFLGCEINLRQCAKKILNFEYPHENTSHGLLSLKKPRASVHVHHGGKLIVIGMPSLEAAKLVLRKCARRIQRIHKNALFGCFNVTQSFGSGKLRQCLDLEKMAKSNKFAIFNPEINSSLLFQKNGSKMTVYKNGTITCSSVSSGAFFDAFEDLLRNFNQFLIKSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD8</accession>
    <name>A0ABV2AHD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000947</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000193">
        <property type="protein sequence ID" value="MES1919078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="72"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="87"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12428" checksum="7C45D53CBB1530B5" modified="2025-10-08" version="1">MLLSMDLDLLLNDLKLEKKVHCMRILKEIKKLQKFKTQNNTAKETQFSENDIKCEKTEKDVVKAEKDEKLEAVEKETEKDDLEQIRESSLSTLTESPLLDSFSSAEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK7</accession>
    <name>A0ABV2AHK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001014</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000210">
        <property type="protein sequence ID" value="MES1919150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="430" mass="46803" checksum="1AB8AEC4084D7283" modified="2025-10-08" version="1">MPSGILDGSQFGLTLKGATLSGGVEGATNYDLLSRGKNLFGQYVVDKMILNYGVNYKPLFFNGELAPTHLGESIWIATIKVKPNTKYSISRYLPPTMLLGVEKSSQTSGISNSNGELVISYYQNPSVVLTQKITNIMLVEGDVASYEPYQEDTASITLPRPMAQLQNGISDEIDDDLIYNANRYVLKSTDIQAIGVNNLVQYVVIKQVTLIGMLPNIDSEGMATSRTTPLGSNPAGSTFYAHYINPGNYVFTFPLNTYADVNEAKADLIGTIVYYQLAQPATIHDGEQGYQAPTSIKTFKNGNLTQIGTHEKIYTLSNQDTITVPQKLIDIDSRDYGVWELDKNQQALNKISGVTLSSDGLTLTLPSSIDKSVLVKAELDPGVYLNNELHGNVPSNIGTAIGTNSDAIAKINKEINRINNELDLIIVATI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS0</accession>
    <name>A0ABV2AHS0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ethanolamine kinase</fullName>
            <ecNumber evidence="3">2.7.1.82</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000813</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from ethanolamine: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the choline/ethanolamine kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.82" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000156">
        <property type="protein sequence ID" value="MES1918923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22603">
        <property type="entry name" value="CHOLINE/ETHANOALAMINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22603:SF66">
        <property type="entry name" value="ETHANOLAMINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01633">
        <property type="entry name" value="Choline_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00037883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15662" checksum="0D3493ED9E66E921" modified="2025-10-08" version="1">MKCSMSIKPISKVLIRIYGGSHKDAEQTAKERLEEKNRFALIASQGLGPDFYFDFGDGRLEEFVDGRIAKMEEMADLKFCQEIARQIARFHLIKGVTRQSTSSFQKHVKGFLWVIRRRSCGDLKSLDIDSEGSFSCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS9</accession>
    <name>A0ABV2AHS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001091</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000233">
        <property type="protein sequence ID" value="MES1919231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16449">
        <property type="entry name" value="RING-HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="479" mass="55710" checksum="A69B9DCD99CDBE7B" modified="2025-10-08" version="1">MPKRIPRETVANILEILTDEPVPPSAASKRYKKKFKKGVNFGSLGYKNFQNVLNVCPGVMKVILDGEENYVNEKKYQKSESNKPFASKNVVALPRKAKNSFQNGYKNSFQNATFDNSIKSFQVGSANNFYRNSKNFYENDNFAKTKNFDNSKNFYENDNFAKTKNFSNSKNFYENDNFAKTKNFNNSKNFYENDNFAKTKNFNNSKNFYENDNFVKTKNFNNSKNFYENDNFAKTKNFSNSKNFYENDNSFGSSKENFVSKDNLFQSDSKFGDKTNSTKIFDNREKSIFDKFELNFGQNDFFQNSKTNFDLPKFKFERANSFKKNNGMAENQIDENSQNLTKKNENILKKRIIDETDKRNKFLQNLKKLEPFDGDKKEFLNKQVKKGVELALETVRKEKEMSKSRVEALMSVIKLTEEAIAEMETSSLGRCPAFSCFNYVEVVVCPCGHLYCDGCAKRISSRCFLCSKEVIKMQKLNFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT8</accession>
    <name>A0ABV2AIT8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">U3 small nucleolar RNA-associated protein 14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001242</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000279">
        <property type="protein sequence ID" value="MES1919404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006709">
        <property type="entry name" value="SSU_processome_Utp14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14150">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14150:SF12">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 HOMOLOG A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04615">
        <property type="entry name" value="Utp14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="554" mass="64658" checksum="ADB96E81A3D634B5" modified="2025-10-08" version="1">MSDNLFDSEIDSDIVSDFEFGDSGYTENKHKNLIKNVLENRNIEQTEIQKLTTEKKSRNQFNIFHTKKISLEDLATDVNDDSLKNKIKSISKNFGPNLNKSATNFNPSTEKRMERKICYEELKGAVSKWDPLVKRKRKSSQISFFSKQTPLIEKPNLKEITSNVKNTTSFDKKFVKLLSGLTKNKSNNFAKHKNLDKKETMDKAIQKSKDFFDKNRNKRVKKIKSRKYRKMLKREKNKKINDLKKDGLLAEESKENLILARAKERMDLRHKNTSKWAKRVAKRPFLAKDSDIKNSLEDMRQIDKNLRKRVEKERETDNNDENLFDVKSDSDDSKEGTKKGIFALKFMKKALEKNEEKSGLSDNDGEKFKTLNIFKKSSSNFKNNKTAKNEKSEKLIKEFAEFDSDSEDFIPLGESEDNNDRIAEVETTGFEREDFMKKQEENVEDENSEDENVGWGSWAGKGIRKKKKIKKTEKKPLEKTVVFNEEAIAETLSRVTIPEKPSEFKSENKYNKLMETSIGRNWNTEKEFVEKIKKRVVFRKGIEIEPMEIGDSFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ53</accession>
    <name>A0ABV2AJ53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001241</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000279">
        <property type="protein sequence ID" value="MES1919403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="133"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="24916" checksum="71D7DFDA2A78DEE6" modified="2025-10-08" version="1">MNELSEDKREYYLREARKVRAKLFKQFETKSLEGKNNDKIDDKKIEVENKLTVEKYLNTFPKTNFEKYNSIENLRISLDKYQNQIETLAKITMNINRSHLENTLKNDNRFIKSPEINKINDLKAELYIKSDKIDNLEKYNKILENKINFLEEENMLIKENLFELKNALFNKKEESEMLLLNLRQTIENLLNKKLDQSIKTTEHYQND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA1</accession>
    <name>A0ABV2AJA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001378</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000329">
        <property type="protein sequence ID" value="MES1919569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="20879" checksum="FC1D145A93C58060" modified="2025-10-08" version="1" fragment="single">MASTLKNMAYVFVKTKQNRLFCKLAKNDFTRKKINPETVDISLPSTSISKIEDIPLTLNTKTANKMAFRFLLSGLDLDKPLSQTKNKASFEKKSLPEMLDSFKQLLSEDKLLDAEKVNEFLNKAANENKFALVRDFIYFLGINGFNPNQKHYYYLVRALCNAKEIENAKSVIDSIKANGQPLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB0</accession>
    <name>A0ABV2AJB0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ubiquitin thioesterase OTU</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">YOD1_2</name>
        <name evidence="5" type="ORF">MHBO_001531</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Hydrolase that can remove conjugated ubiquitin from proteins and may therefore play an important regulatory role at the level of protein turnover by preventing degradation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000390">
        <property type="protein sequence ID" value="MES1919757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003323">
        <property type="entry name" value="OTU_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13312">
        <property type="entry name" value="HIV-INDUCED PROTEIN-7-LIKE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13312:SF0">
        <property type="entry name" value="UBIQUITIN THIOESTERASE OTU1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02338">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50802">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="OTU" evidence="4">
        <location>
            <begin position="87"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU367104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="30458" checksum="4FBD9B35ED354557" modified="2025-10-08" version="1">MSRKVKCKFEEKEHLLKMEENMLFTDFKVLVSMQFQEDNLKFDCGELKDITSEFSKIDDLGFFDNVVKIYKNNGKNEIMDYYNDFDVKIIKMAKNNSCLFSSILNGFGEKKKRQFQLKDYKDLRLETAHFIQNNSEKMRKYISGNTYEYAEKVADSDFWGGSVELSVISIIYKTEIMVIDNKTRCEYLFGENQNFRAKIFILYNGTNHYDALILKNRKNGKILTEFSSNDDIINKKMKMELIRDKQVKQKNKNGCAIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB9</accession>
    <name>A0ABV2AJB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001532</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000390">
        <property type="protein sequence ID" value="MES1919759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12543" checksum="BA2BA9C9B71D0AD2" modified="2025-10-08" version="1">MAFVAKNQTLVAKKILNLRKAILKHKKSEKLNFNNKLAIYVLKKICSNNKYYESSFWFKGDRFINECAKFEDWNCILKELDYAHVLRSNEIFEILRRTNPLLEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT5</accession>
    <name>A0ABV2AJT5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001504</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000381">
        <property type="protein sequence ID" value="MES1919724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="216" mass="23598" checksum="E4332CB8415B5936" modified="2025-10-08" version="1">MPMSRNSDCFFCFIISFFSFLYSFSAAVSFAFFWSSFSSAESFFLLVRLSVLRSTLFPLFSFLLCGAVPLLIFSSSQNSFVFLKASCALENFLGKFGRFERAGSSSSSLAKDRRFFCLRPACGAPVPSFCLVTKTDEGFPGSSAERSSPARFAMSGKGFSRMDILSIVGGCSGLSCSPSSLEVALETCLRDVQQREDGRVRDLPEDGVLSVQPRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK19</accession>
    <name>A0ABV2AK19_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001744</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000478">
        <property type="protein sequence ID" value="MES1920014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7326" checksum="4B0030CA4E815981" modified="2025-10-08" version="1">MSNRRVEKILKRLPSTFSQFEDLLRPPAKFTELYKSEIFGVYKSAIRDFQCKEECKKMFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB1</accession>
    <name>A0ABV2AKB1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">rRNA-processing protein EBP2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001827</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the EBP2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000516">
        <property type="protein sequence ID" value="MES1920111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008610">
        <property type="entry name" value="Ebp2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13028">
        <property type="entry name" value="RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13028:SF0">
        <property type="entry name" value="RRNA-PROCESSING PROTEIN EBP2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05890">
        <property type="entry name" value="Ebp2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="165"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="114"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="172"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="194" mass="22830" checksum="6E06C4ECE837ED17" modified="2025-10-08" version="1">MVESEFVVNNKSELAKVLNSIDTKIDWLDRLDISIKSENPKPVKVSDDLQNESKFRESAFKACEEALIKLKKHKVPIRRPSDFFAEMVKSDKHMLRIKKRALLETKAVQTIKSRQRRKENRKFSKKVKQKAIKSELSNRKDEMDIIENWGKSSSKSIRDLDRALSKLNNEKKGKKKFKKKRKINKTGRFKSRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD0</accession>
    <name>A0ABV2AKD0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Histone-binding protein RBBP4-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001850</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000528">
        <property type="protein sequence ID" value="MES1920136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051972">
        <property type="entry name" value="Glutamate-rich_WD_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022052">
        <property type="entry name" value="Histone-bd_RBBP4-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45903">
        <property type="entry name" value="GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45903:SF1">
        <property type="entry name" value="GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12265">
        <property type="entry name" value="CAF1C_H4-bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="Histone-binding protein RBBP4-like N-terminal" evidence="4">
        <location>
            <begin position="23"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="95"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="254" mass="28705" checksum="5818535552BADA65" modified="2025-10-08" version="1">MVETTRNTQKVFRPNMDEKRKKEEMKYDSSAYLTLNDLRTDLPSLSFDIVSEENILGQKIRFPIQTTFVAGTQAPKGKANKVSIFRVSNIQKTKYDDGNTSSDDSDEGKNSLKTDDIDPVIKEMSFNHPGAINRIRTMPQNNKIISTWSDNSKVYAWNASDLFDGLKNTKTEKSLEKKNTLKPIGCNEKHSCEGFALSWNPHVEGTLISGDCNGAIYLNQINTENLDVSKTEFKGHLDSVEDVQWDSSNQHVIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN4</accession>
    <name>A0ABV2AKN4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Prokaryotic-type class I peptide chain release factors domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001884</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000542">
        <property type="protein sequence ID" value="MES1920187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052104">
        <property type="entry name" value="Mito_Release_Factor_mL62"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006718">
        <property type="entry name" value="PRK09256.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11075:SF54">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN ML62"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11075">
        <property type="entry name" value="PEPTIDE CHAIN RELEASE FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110916">
        <property type="entry name" value="Peptidyl-tRNA hydrolase domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prokaryotic-type class I peptide chain release factors" evidence="2">
        <location>
            <begin position="23"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="98"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="126"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16749" checksum="EA67FB21DAA80C68" modified="2025-10-08" version="1">MATKRYMKIMNLPKNKFRVSFSRSSGSGGQNVNKVNTKVSMRISIEDIDFLGEKSLERLKVMYKNRINNKGEIYVTSEKNRTQAENIDDAFNKFKEMFTKASNEPKPRIRSKPPKSANERRLAEKKYKKNKVRKRKNFDEDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ1</accession>
    <name>A0ABV2AKQ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pre-mRNA-splicing factor 18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001608</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PRP18 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000421">
        <property type="protein sequence ID" value="MES1919852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.940.10">
        <property type="entry name" value="Functional domain of the splicing factor Prp18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.110">
        <property type="entry name" value="Pre-mRNA processing factor 4 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004098">
        <property type="entry name" value="Prp18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014906">
        <property type="entry name" value="PRP4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036285">
        <property type="entry name" value="PRP4-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039979">
        <property type="entry name" value="PRPF18"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13007">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13007:SF19">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR 18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02840">
        <property type="entry name" value="Prp18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08799">
        <property type="entry name" value="PRP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47938">
        <property type="entry name" value="Functional domain of the splicing factor Prp18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158230">
        <property type="entry name" value="PRP4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Pre-mRNA processing factor 4 (PRP4)-like" evidence="10">
        <location>
            <begin position="76"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="Prp18" evidence="9">
        <location>
            <begin position="170"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="55"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="318" mass="37724" checksum="343A10DD1891F9D2" modified="2025-10-08" version="1">MNQAILEVIAAERKRRKKKEKDRSQKKAKTETENCAKSESKSPNSKSHNEENRFYPQNSKFSKISQNSKYRNSNYVINRLREMEEPIKLFDESDLNRIKRLKIAELNLHEKKTSSKGIRNVFRDIQEKVEMNMHKEKSVSGKKKRVPAFVHKKPTAHRANFDCAEFFILAFFKQLLAEWEDDLEQRPMEEKRSREGKHQSAIYLQTAEYLRPFFEQLANRECAADISEPVERIVMLMQQREYVMANNEYLTMSIGNAPWPMGLTMVSIHERKSRSKIYSNQIAHILNDEETRKYIQCIKRLMTFCQERYPPDTADKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKZ9</accession>
    <name>A0ABV2AKZ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">SP-RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001699</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000460">
        <property type="protein sequence ID" value="MES1919957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004181">
        <property type="entry name" value="Znf_MIZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782:SF4">
        <property type="entry name" value="TONALLI, ISOFORM E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782">
        <property type="entry name" value="ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02891">
        <property type="entry name" value="zf-MIZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51044">
        <property type="entry name" value="ZF_SP_RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SP-RING-type" evidence="6">
        <location>
            <begin position="615"/>
            <end position="696"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="343"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="710"/>
            <end position="745"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="25"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="52"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="73"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="353"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="366"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="710"/>
            <end position="724"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="745" mass="85588" checksum="C2C12959301EACD2" modified="2025-10-08" version="1" fragment="single">IAKSRNQFADRQIYSPTEFPNQHENANDTRTTEKSNKFDNFDESKNLDSNSKKSRGFTYKPRKKDKPKFEQIPNDQNNNEEQNSFQRNESIDKFDEKFQNFGENFVSRRFENFDNHFDPQQMPMQQRNQNFFDPQKMAQSSFMFPPPNFPSNFPNNVHPPFGPPSMPFGGFFVNPNLPPNHSQNFPSSENSANRDIKILKVRKMSIFKKLSDFIMQNHIKNFQKSAHSTIKMVFESPPDDLMTQTVLKLSGDEANKLRNVYLKPEAQKPEFEELFEFLGDVFGNEVKRAAVVVDHSNDDKNTNKTKKTDNGKKDDILADLDKISDFLSNIGDLDTADIPGLGKISSDSTNGQNENSSNVSEKSVNDLSNTNRKNQNFLKNGISKNLPTVHKNDFENKNSEKEKNAQIIENKVLSTYSENASEILKTLNLQEKLIIATKWIRQCSTFTSFVIDKIKQIALNLIEELKKHSKNKEKSFVFSEKAFFAELTSKLINHLSKENSRLLIKTIKSYPGHLLLNLNLPNLANIDEKSQKELKKSKKPQFRQLLGICSNCKIDEMVYLCSWCEVQYCGSCVGNAKKPPCKNCQKDLTPFEKVLLYQTIPFERALRKIVNSFEKEKSVEETSFSLPLFDPFSFKRIEVPGKGRNCEHRNVFDVKSFLLRCNKKTFENCPVCKKPIGESDLEVDGFIERILATEPEDIRDVTVMKDGSWINSQGKLKGKSAQSPNSKNEENSKSKRKKKCIDLTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL57</accession>
    <name>A0ABV2AL57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Charged multivesicular body protein 2A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">CHMP2A</name>
        <name evidence="1" type="ORF">MHBO_002084</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000656">
        <property type="protein sequence ID" value="MES1920415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10476">
        <property type="entry name" value="CHARGED MULTIVESICULAR BODY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23192" checksum="19FC3B1553F61C99" modified="2025-10-08" version="1" fragment="single">KQIMGIFYSRSFEDIVKEHKRLISKSMRDIDREYRNTEIEEKKLLAELKTRAKKNEMEAAAILAKNIAQVRTQRKKYVKIRADLMSLKFKLSEVASMQMLATSTMQCARSMAVMNRLSNLPSLRNALMQFQRQSEMLGVKQEMLGDMLDGVEIDEDELQEELVSAVLEEVGIEVDRSLVDAPSNITSQNIKTDFENRINRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL83</accession>
    <name>A0ABV2AL83_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002099</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000667">
        <property type="protein sequence ID" value="MES1920431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.79.10">
        <property type="entry name" value="Nucleoside Triphosphate Pyrophosphohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11839">
        <property type="entry name" value="UDP/ADP-SUGAR PYROPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11839:SF15">
        <property type="entry name" value="URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE NUDT14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="Nudix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="137" mass="15783" checksum="938D77F6FE661818" modified="2025-10-08" version="1">MYKVEKTAISKCSKSVYINPKTIFYNQNGQQKSWDFVENIDSVAVLVFHKQKNCFIFVKQFRPPVFEHLEKNLNIFDTEKTPKGFTIELVAGLLDKKGLSPEEAVREEMIEEIGYRVDTKRIEKIVAYLGNVGISGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL97</accession>
    <name>A0ABV2AL97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">CCAAT- binding transcription factor component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">HAP5</name>
        <name evidence="4" type="ORF">MHBO_002114</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000676">
        <property type="protein sequence ID" value="MES1920446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003958">
        <property type="entry name" value="CBFA_NFYB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050568">
        <property type="entry name" value="Transcr_DNA_Rep_Reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10252">
        <property type="entry name" value="HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00808">
        <property type="entry name" value="CBFD_NFYB_HMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription factor CBF/NF-Y/archaeal histone" evidence="3">
        <location>
            <begin position="2"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18853" checksum="D4DEE104BEC684EE" modified="2025-10-08" version="1">MIRNEVPLVFSKAAELFILEMTIKVWEVTKRNNRKTIQKSDVLKIIQEDPHYDFLNDVLPNVWNNNILMNENAPITVPPDFPEPENGICTFQENPSNGYNNLIMGCFEPEFQGMQVPMGETNGTKIVSLDGEEEMEANGFKEYRNEEVQEEYKFEDDPGEFLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG7</accession>
    <name>A0ABV2ALG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">BUB1</name>
        <name evidence="3" type="ORF">MHBO_002171</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000710">
        <property type="protein sequence ID" value="MES1920506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015661">
        <property type="entry name" value="Bub1/Mad3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013212">
        <property type="entry name" value="Mad3/Bub1_I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14030:SF4">
        <property type="entry name" value="BUB1 KINASE, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14030">
        <property type="entry name" value="MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08311">
        <property type="entry name" value="Mad3_BUB1_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00777">
        <property type="entry name" value="Mad3_BUB1_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51489">
        <property type="entry name" value="BUB1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="BUB1 N-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="356"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="372"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="493" mass="57458" checksum="1AA7A215DB6559C0" modified="2025-10-08" version="1">MEDFSPKDDKLINFEQKIKGKSNLQKLKLWKTFLRKEKDKEKYICFLEKCLNSLIDAKDLKNDATFLNLWIEYTIALPSQAALKIFRILKHRKIGIANSMFYLVWAAQFLRSKKRKQAIKILKLGMDLKATPFNALKTRYKQLTKKSKKTKTLNEIYKELESSYSSEIDDILTKPIKENDILSNSKKSLSCEKYLDKNNPLTETPVPNSGKSKSKGKIFDKFQIWKNCLDWSISQNDKNFESLAKKCVDDFCPKITKNKDNFEQFSNLLKNYVSEIPPFYSKILLSLLQHQNAKNGCCNNKRDENNKKDVLNAKSISELCEELEDSYSSAIIDENLANTQNFDNEETFENNKENLTNRQNFDNEETFENNKENLTNRQNFGDKQNFDEKNIETFTESSGKSNNLDKTEKLNFNKNSIENVDTLSMPTKTLSYNIYNENSLIKTPIPKKLFEAKFGKNKIKFGQNSDTFVIKRNQFLQSTKIAKKKKIFEKSNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH8</accession>
    <name>A0ABV2ALH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phospholipid/glycerol acyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002181</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000715">
        <property type="protein sequence ID" value="MES1920515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07990">
        <property type="entry name" value="LPLAT_LCLAT1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032098">
        <property type="entry name" value="Acyltransf_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10983">
        <property type="entry name" value="1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10983:SF24">
        <property type="entry name" value="1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 3, ISOFORM E-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16076">
        <property type="entry name" value="Acyltransf_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69593">
        <property type="entry name" value="Glycerol-3-phosphate (1)-acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="17"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="312"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="338"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="Phospholipid/glycerol acyltransferase" evidence="5">
        <location>
            <begin position="92"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="358" mass="42136" checksum="1C4DA8049295FD49" modified="2025-10-08" version="1">MAFSKSRLLYFRHALRIAIFLQIVVTYYVSSVYLNLLQIAVTACRFVPKKRRLMFCRFFSRSWWRVSVFGLIRFLKVKFIFYGDDPSPARPGVFICNHSRGIDFMTIIVNLLSTGIDLSKITVMSKKWLLMVPAIGPMLFFQGSLFLDRNWQNDKSKIEQCVSKQLSERKEGIIAMFPEGTRFSDVKLSLCRKFAAERNLPLPKHVLTPRVKGFAELLSIRKHSFEFIYDFTIVYRPKNVRIRNFIFSKNLNCEVHVLRRFVSLDDFPNDKKGIADWLYKSFAEKDKEIDYYMKNGSFDAEKRDIKIPSFELNYFLHCILSGICIRFILGLICEYKKQFFGLWCVIMWMTTAEVNICQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR1</accession>
    <name>A0ABV2ALR1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="6">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">HAS1</name>
        <name evidence="9" type="ORF">MHBO_002061</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="6">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000641">
        <property type="protein sequence ID" value="MES1920384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="8">
        <location>
            <begin position="19"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="57"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="19"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="22961" checksum="7308FA8311093EBD" modified="2025-10-08" version="1">MSDRELTTKIGDSTSISDRSFESLNISDRTKNAVKKLGFSTMTEIQAKSIPLIMVSTFSLKSDKDVIGAAKTGSGKTLSFLIPSFDLLHRDNFKQKYGTGVLIISPTRELALQIFGVAKEIGKEHPSRNIGIVMGGCNRAKEAKMLSKNVSLLVATPGRLLDHLKNTKKFVLKKLKLLVIDEADRILDNGFEQEMNRILDLLPESYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV5</accession>
    <name>A0ABV2ALV5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000784">
        <property type="protein sequence ID" value="MES1920644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10391" checksum="413F1E110CC733EF" modified="2025-10-08" version="1">MVIFLATETEIVILEGNKTSVQHFARQKSLKPKKIEISVPTNGEKFDKITVSKRGQVFLKSQNGQLFELEYKVFNLMRIGQPKPISEHFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM79</accession>
    <name>A0ABV2AM79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Dienelactone hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000851">
        <property type="protein sequence ID" value="MES1920766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002925">
        <property type="entry name" value="Dienelactn_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051049">
        <property type="entry name" value="Dienelactone_hydrolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46623:SF6">
        <property type="entry name" value="ALPHA_BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46623">
        <property type="entry name" value="CARBOXYMETHYLENEBUTENOLIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01738">
        <property type="entry name" value="DLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dienelactone hydrolase" evidence="1">
        <location>
            <begin position="22"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="26574" checksum="18E6AB7F64B71F7F" modified="2025-10-08" version="1">MAKAATKLINITSKNKKGILPGYLTTQGSNSSAPGVVVIQEWWGVNQQIKDQATNWFHSKGYTTLVPDLYRGEVAEDFETAGHLMNTLDWKGAIEDIQASVDYLKNIAKTPKVGTVGFCMGGALSLASAVHVKNLDCAAVFYGIPSRDLADPKEIKIPLQLHFGQKDDLKGFSSPEDQKNLVERIKEGDFDHSKHETHFDYRAGHAFTNKKRPECYSESDTNLARERLYAFFKRYLDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AME8</accession>
    <name>A0ABV2AME8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000892">
        <property type="protein sequence ID" value="MES1920823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="13222" checksum="F5400DA396A402D5" modified="2025-10-08" version="1">MFKNDKNLNLLKPENFKFNLKFQPVSHLEIDFLKHKVGNEEREILASMDTWEDVGKFFENRKDDLKLVDAVEVNQIFVYWVPLHQIDDSLSLKFDVESKKREDLYPFEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH4</accession>
    <name>A0ABV2AMH4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000788">
        <property type="protein sequence ID" value="MES1920654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="92"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20321" checksum="E4FA50E0E62057FE" modified="2025-10-08" version="1">MRNFIYTLGIAGVVVSYAAYRLSRSINNGEDEAERKKRREQEQIKKESAMSKTKNFNAILMCCQLNSFIINEGLSIEDYTGKTSLGRLENFLPKEVFQSIFGYCDISDLCRIKEVSKSWKSFLDHFLKSKDFLRKCAMRGFKKEHRKNYWLIISNFKERGTFEVFLSKKDTIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK2</accession>
    <name>A0ABV2AMK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Zinc finger PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000805">
        <property type="protein sequence ID" value="MES1920684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="448"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="530"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="530"/>
            <end position="544"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="604"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="604" mass="70556" checksum="DAA15FAF17160CB3" modified="2025-10-08" version="1" fragment="single">ENLNKKSKKWSKTIKIALKLSNLKKKQNSRQFLEDNYKKFQNVAAPVFWWTAKDGIMFILNVLDKGLTKFDQIFKHFDFSDKFVLLKNNFESHPRELIQVNNIQCRCKKGEVKFSIRNLAKCALCKKWMHIGCFRFYSFNDGAICSNCKLPIPPKKILLEYLDKILTILDISEKEEKTENFEDVIKKENNFDEQKIFLENKFIKNINNIIKFGVKDYSKTSKTTKKLLRTSLEIFLKEEKKYLEEHKNESSAKRNFLKLSEFENLKCCDNFSGDKAIIFCSICNEWRHSDCSPNPATFCYKIENCSECSNLSDNETLFRRKSSIFKLKNKWQFFCDKILNKNGERPKSKNPMNESSDELETCQLLLVQLKMKIQNLAKPKNLANGEKAELKYFAKKMAGIDRIARNLSAYPTPNHFAEDIRTILRELWLNFNENLAIRSKIEKTKKEFEKSFSRTVPKHRAGPNRSDQDDFEEESDVTTAQSPKLSSKMATKIIERVRLFDKIRFCLSLDTNTLRIKAASAALKPLDKNDKNKLFESPENRDNDNLNSESSSYEIRMPKWWDPPLHDVLVMFGLERNGFGEVLAIITDPFFRPALLSFEGIVDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK6</accession>
    <name>A0ABV2AMK6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002507</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000933">
        <property type="protein sequence ID" value="MES1920890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13866" checksum="C379CF7B0773E4E0" modified="2025-10-08" version="1">MSKNFRWSKKRQKRISSAERDFVRRWQSQKESKFLTRENTLVQEECRTGWRLERLNGPLTLSSERVKDGVVRWYSESRGVGVISVDQPPEEVYFFVEDTPDAQGICVFKILIAEFNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMQ7</accession>
    <name>A0ABV2AMQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Splicing factor 3B subunit 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SF3B4</name>
        <name evidence="3" type="ORF">MHBO_002556</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000977">
        <property type="protein sequence ID" value="MES1920955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052084">
        <property type="entry name" value="SF3B4_spliceosome_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48030">
        <property type="entry name" value="SPLICING FACTOR 3B SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48030:SF3">
        <property type="entry name" value="SPLICING FACTOR 3B SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14276" checksum="88BB62F570120C68" modified="2025-10-08" version="1">MLQAGPVMSVNFPRDKVTGTHQGFAFVEFRSEADADYAMKILNMIRLIGKTLKINKATREQGEQDIGANLFIGNLDPDVDEQVLLSRISAFVHDIQCFRTSCCCESNVRRDRRWFKRIWFRQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW0</accession>
    <name>A0ABV2AMW0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002588</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000998">
        <property type="protein sequence ID" value="MES1920982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="14799" checksum="26819068EAEB7D12" modified="2025-10-08" version="1" fragment="single">MDPPVNDDPKLGLFDFKKFIHHDKDEPTKLMSELQGMDLTLPTRKPASMHNVVRIAKEKSLDVASVNTPVRIDSTIDAIYDSVCVNVLHKMRQHSDCLRPEIFNEIGLRVDMYNVSIVLDDLINKMHNAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY5</accession>
    <name>A0ABV2AMY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002616</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001018">
        <property type="protein sequence ID" value="MES1921012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7069" checksum="A2976F3B5C7D7FB4" modified="2025-10-08" version="1">MNCYVSECNGYEGYKLSKSEFPYLKCLVLIKLRKGNNCVIQQQIMLFAGDTSNHRSTRMPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN55</accession>
    <name>A0ABV2AN55_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002391</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000844">
        <property type="protein sequence ID" value="MES1920752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="467" mass="54746" checksum="66E6B58B7F69CA5D" modified="2025-10-08" version="1" fragment="single">MELYFEQLKQPLRLRQNSKAIEITKKLTSNRIPDGVVFPENNKDWSNLMYEDINIGQYLLLPNKKCPVTKNGIFYDGEHRIGQVRRLNPIKEEALLSFMDETTCLMEQKWIPVGNLKFIVESRFYRNHEHNEYEQWTSLEKCEKKYLEVLSDLANLKIRKLAKFLLAKKDLKTFEIISNKQFVEKIVFGMIFDNIELFYLRKLGEIEQKKENTNFEKTVLSLLKKSFGQDFLPFLIQKFESAVIQIDNFGKKSYTLSTKSVPEMTKKKEFVIKMGIDGAVGLVIIFSKKSFIDNGENFLSFYGDEECTNLIASYFPKNNFDSVEFPPLFVRGDRCWAKGIQTAENCIGFKIAILPISKHLGMSFWLANFILESIQDENKIGVCFELLQICLKWKLLEKAKPSPIKNAFVNLCSILIYKIKELKNDKNTKNEIFNENQNLQKLGLLYEEMNRLFSKEFKDEYTEYLQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANC9</accession>
    <name>A0ABV2ANC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002747</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001129">
        <property type="protein sequence ID" value="MES1921178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11259" checksum="F15CAD57B09DBD2D" modified="2025-10-08" version="1">MSKIKIFKKFERKICLKASKLAAGIPNTYLEGLAKDQNIYGDIETASNACFQDESCNGIVQIGDSFSLRKGTELLKSLSNEITFLKITCKERFSRNQFIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ6</accession>
    <name>A0ABV2ANJ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cullin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002797</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cullin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001179">
        <property type="protein sequence ID" value="MES1921240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1310.10">
        <property type="entry name" value="Cullin Repeats"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045093">
        <property type="entry name" value="Cullin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036317">
        <property type="entry name" value="Cullin_homology_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001373">
        <property type="entry name" value="Cullin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016159">
        <property type="entry name" value="Cullin_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11932">
        <property type="entry name" value="CULLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00888">
        <property type="entry name" value="Cullin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75632">
        <property type="entry name" value="Cullin homology domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74788">
        <property type="entry name" value="Cullin repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cullin N-terminal" evidence="3">
        <location>
            <begin position="41"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="354"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="359"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="552"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="552" mass="66026" checksum="D3B325AD1C08B424" modified="2025-10-08" version="1" fragment="single">MASQQKTQKFDIESDWKTLSEIGINPFFERVENCSSTELKNMNIPQKSYLKCYSLVYAMCNQKPPPDYAALLYEKHSKILENYCNRVSKQKLEKVKDKIPKFLIEWITRWEKYKWIVSGLRRIFLYIDRFHVEENKQIATLTEKGYFLYKNLVFGNFAKSVAANLIQIYQNERSQYFSNLIRDCLKVFEEIDEFCNEKFYENVFEKMFFEHSATTFNKCAANFIEEKMDFRSFLENTEIFLEEERKRSQKTFNVKTCKQLEQIAIDIFLDRHHKNFFSKEETTLRNLFRERNLDLLAKTFSLYKLESSKKGSALILRAFGHHISDRFETFYKTNQPKWLKFFWKIDDHKIKKFQNNNETTKRPISKSEDEKRKNGMNNGNEESTLDVGADRIDFGEWIEWHQRTTNCVLEEHRESQKIIEAVFNGDVGVNAVVHRETERFLNSRERFAPALAQLLNDALAARRNYRKKTNSAVETRKVVALHRFVREKKLFEKVFLLLMAERHLNENVKSRAFEIRLLEALSAVSGINWKERFDWICLEKMEFKKLQQSCFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP6</accession>
    <name>A0ABV2ANP6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase M41 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002839</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001221">
        <property type="protein sequence ID" value="MES1921289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076:SF97">
        <property type="entry name" value="ATP-DEPENDENT ZINC METALLOPROTEASE YME1L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076">
        <property type="entry name" value="METALLOPROTEASE M41 FTSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M41" evidence="1">
        <location>
            <begin position="48"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="24942" checksum="CC91EC7A2EB0C822" modified="2025-10-08" version="1">MVNLVNIAAIATLKNRENEITQERLRDAVLQVSIGKVNKSIHPSQKVINNTAVHEAGHTVVALFTPGAKKVDLLTILPRGPSLGSTWLTPKEGAQYLQSYEEMLGQLDVMMGGHAAEELVFGRENATSGASSDFKNATNLAVAMVAQFGMSDSLGKFSSDPGQFSQWSPYLKEQVLTEARKLTDDSYCRAFNLLKEKRSVLNKMVNEVSRKDTLLQDEIYEIAQIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX6</accession>
    <name>A0ABV2ANX6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002899</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001283">
        <property type="protein sequence ID" value="MES1921365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="27914" checksum="5C4C1DC6EDB43374" modified="2025-10-08" version="1">MLRNKNFVIRKADSDNIHETTFNDWLVVLGMVSTFGSKLLYKNYKARILKKSSKQNIEKFLIENLPTEYVDSLGPYVIRRIASFLVDRNPSEKMKDIYPEIDRAKNLLKTVFKKAKFFIKKLCFGFLGASISSIYSLISIGLTGITATAISLLYIAVYQLSKQKKVKIFSDEFLCFSLMFGYQFMRHFISQRVYLFCFMGYRIGISCDNVQDVIFYTRFICEERLQLAIVAIDSIDFLSLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX8</accession>
    <name>A0ABV2ANX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex</fullName>
            <ecNumber evidence="3">2.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002910</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001293">
        <property type="protein sequence ID" value="MES1921376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06849">
        <property type="entry name" value="lipoyl_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.320.10">
        <property type="entry name" value="E3-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045257">
        <property type="entry name" value="E2/Pdx1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036625">
        <property type="entry name" value="E3-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004167">
        <property type="entry name" value="PSBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23151">
        <property type="entry name" value="DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23151:SF90">
        <property type="entry name" value="DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02817">
        <property type="entry name" value="E3_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52777">
        <property type="entry name" value="CoA-dependent acyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47005">
        <property type="entry name" value="Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="Single hybrid motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51826">
        <property type="entry name" value="PSBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2 3" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="5">
        <location>
            <begin position="31"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="Peripheral subunit-binding (PSBD)" evidence="6">
        <location>
            <begin position="168"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="123"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="132"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="368" mass="40908" checksum="F465CCEBC197F909" modified="2025-10-08" version="1">MIFVASRIVKKKMFCLRNFSARFASYKGVDYTPSIMPKLSPTATESKVEEWLVSEGDFIEPGDSYCNVETDKASVSHDAQEEGYIAKIFKSDEKVAINSIIGIQVENESDVAAFKDFALDEHSDAPNQQETGTKEESKPEKTKDENELAIKVEDKKNVAQSEKPERILATPFAKKLAAQNDINLLKTNVAPSGLGGVFIEKDVRNLIKRPAAKSASSKTAIEDESQNLFTDVPLTAMRETIAKRLLESKQTIPHFNVEQTCNMERLITLRKKLNEIDGVKISINDFVLKASALALRKVPEVNSSWQHKFIRTYRYADVSVAVSTPTGLLTPIVKRTCCKGLDEISKEVRSLAAQAKEGSLKPAQFVVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP15</accession>
    <name>A0ABV2AP15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002719</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001107">
        <property type="protein sequence ID" value="MES1921143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13962" checksum="5C602C2FB82F9467" modified="2025-10-08" version="1">MVFKEVFIRIYCLSKDLSVAIFKYVLALKQNVLSPYKSYLHQNNTSTHAKFNIFHTLQINIKHCYMYYVVYCKFISIVPNLHRRAVTNYDDVCSSLKLGYKRRTIEATKMNEKSRYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG4</accession>
    <name>A0ABV2APG4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002894</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001277">
        <property type="protein sequence ID" value="MES1921359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7827" checksum="21206C400DE94FA6" modified="2025-10-08" version="1">MPSNEENVCCRDLDVVIPSFERDWILIHPYYDMLIRNPEVLPITFIKIMMFKLQHGRIPEHLNNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ4</accession>
    <name>A0ABV2APQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="15">C-24(28) sterol reductase</fullName>
            <ecNumber evidence="15">1.3.1.71</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">ERG4</name>
        <name evidence="15" type="ORF">MHBO_003190</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ERG4/ERG24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.71" evidence="15"/>
    <dbReference type="EMBL" id="JBDODL010001600">
        <property type="protein sequence ID" value="MES1921661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000246">
        <property type="term" value="F:Delta24(24-1) sterol reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001171">
        <property type="entry name" value="ERG24_DHCR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21257">
        <property type="entry name" value="DELTA(14)-STEROL REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21257:SF31">
        <property type="entry name" value="DELTA(24(24(1)))-STEROL REDUCTASE ERG4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01222">
        <property type="entry name" value="ERG4_ERG24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="11 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="8 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0752">Steroid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0753">Steroid metabolism</keyword>
    <keyword evidence="9" id="KW-0756">Sterol biosynthesis</keyword>
    <keyword evidence="12" id="KW-1207">Sterol metabolism</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="61"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="91"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1921661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16381" checksum="DA8108A93F4C918F" modified="2025-10-08" version="1" fragment="single">MMWWFTDIGIALKMLEERGTVTTEIVLICFFHLCFVNACFKGEQCVINSFDIIEEKFGWMLLMLDIVMVPFVFPLQTLYIYSAGIEGQSKLYLFVIFLLNILGYFIFDTANSQKDYFREGENPVKRGFPNLCWGKLDNPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS7</accession>
    <name>A0ABV2APS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003212</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001625">
        <property type="protein sequence ID" value="MES1921681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.310.10">
        <property type="entry name" value="ibrinogen binding protein from staphylococcus aureus domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051608">
        <property type="entry name" value="RQC_Subunit_NEMF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15239">
        <property type="entry name" value="NUCLEAR EXPORT MEDIATOR FACTOR NEMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15239:SF6">
        <property type="entry name" value="RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="8807" checksum="04C48EA880028D81" modified="2025-10-08" version="1">MDRAVLISFGYSEKLVHIIFEVYSGGNIILLNSDLKIMALLRPYETSSFKVDVGETYVIERRETAPLTKINKFKNPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT0</accession>
    <name>A0ABV2APT0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Endonuclease/exonuclease/phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003218</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001632">
        <property type="protein sequence ID" value="MES1921687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038772">
        <property type="entry name" value="Sph/SMPD2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16320:SF23">
        <property type="entry name" value="SPHINGOMYELINASE C 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16320">
        <property type="entry name" value="SPHINGOMYELINASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="176" mass="20082" checksum="54B05AD7B9BCC982" modified="2025-10-08" version="1">MFFDVFTTHLQSDENLTDIKMSQLNQLREFIVSKNNGIDPIIITGDFNINALDSVGDIYKKFVNTLFKDLHHFDTILKNRNRHIVTGGYGTGNLKLKDVAEKSYLIDGKALDYIFIATKNQNIDSAQLEKMVKSSKVEPFVVDANTFSHVSDHYGVHSTILFDRENIEITTYKNCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV4</accession>
    <name>A0ABV2APV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003022</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001416">
        <property type="protein sequence ID" value="MES1921494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15586" checksum="E59AA4A32F2AC485" modified="2025-10-08" version="1">MAFVIDKKGNLNNNKSSRELELEGALLGNLDTNGEQTAFEKANGFLSGISEFSEYSSESERPKDVWSDSEDEAPKDQIEAHTPKWARILSEKSKRKFKNRIKTDSKLIKENPKELKKDILSVVNIQTFYNDGSKKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ82</accession>
    <name>A0ABV2AQ82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RAE1/2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003378</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001843">
        <property type="protein sequence ID" value="MES1921842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.519.10">
        <property type="entry name" value="Guanine Nucleotide Dissociation Inhibitor, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018203">
        <property type="entry name" value="GDP_dissociation_inhibitor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054420">
        <property type="entry name" value="RAE1_2_domI_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787:SF4">
        <property type="entry name" value="CHM, RAB ESCORT PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787">
        <property type="entry name" value="RAB GDP-DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22603">
        <property type="entry name" value="RAE1_2_domI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54373">
        <property type="entry name" value="FAD-linked reductases, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RAE1/2" evidence="1">
        <location>
            <begin position="63"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="27572" checksum="C4722EFCFBBBA095" modified="2025-10-08" version="1">MENFKRELDKYLAQRATEKQNLRKFEFEENQNFHKKIICKSLIIGSNSVPNEYLQIEEPTRQITRAVIISDKSLIGGTNSFVAVKPPKENLFSITIIQLSQDQFVSIENHYIIYMSTTYHENARKEISDLVNKIIKKENLKLFCFFEQKEKIINRNLAKNLKNVCLVDQSSCSIGFNASYRQAEELFAEMFPNKMFLEKRHCDSENEIKEELEEIDVMFEGEKTVSRQKLEFFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA2</accession>
    <name>A0ABV2AQA2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003124</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001527">
        <property type="protein sequence ID" value="MES1921593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050896">
        <property type="entry name" value="Mito_lipid_metab_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46434">
        <property type="entry name" value="GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46434:SF1">
        <property type="entry name" value="GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G" evidence="1">
        <location>
            <begin position="171"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="22738" checksum="CA04CCBDD890C0B7" modified="2025-10-08" version="1" fragment="single">MEKMEILHLDEKSNLKTDQNDFSKSLTKNLAKRKFKQICVRCHQLRFQGKVRSGKNMDLSDFWNSLEKIMREYPRSAILLIIDIFDFNGTILKNLKKIVNKDHPVVIAINKIDLIPVNCSKSVLNKWALLSVKNLGLWIHEVMLISGKDNVNLGRLQNSLVDLSKKNIKEIFVVGTTNVGKSTLINSMRMKKMITTVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA3</accession>
    <name>A0ABV2AQA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003396</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001865">
        <property type="protein sequence ID" value="MES1921861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13624" checksum="D7FF0853129B3F53" modified="2025-10-08" version="1">MLRMNKVVKRTFVINFEKHSINAGISKFGKNYDFSDSVLKYSKNMANFENFKDKFDIISKIEQDLDIEIPSKDLVAIKSPKILIKYLQNRLEYEFSLIEKASNRLKSIPPNLKFKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC3</accession>
    <name>A0ABV2AQC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003408</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001886">
        <property type="protein sequence ID" value="MES1921873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12906" checksum="C1F8F84A47599A39" modified="2025-10-08" version="1">MAFLESLDTEEVILNLEGDRFEEKKLRMCNNGIEICGNKNFCTFPEYNEFVRLNLNFCRFCRHSPFIAINNEPENFKLNVNDRQNIEKLFLHHNDKLLIFDFQNQNGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE0</accession>
    <name>A0ABV2AQE0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003220</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SNAPC3/SRD2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001633">
        <property type="protein sequence ID" value="MES1921689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022042">
        <property type="entry name" value="snRNA-activating_su3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13421">
        <property type="entry name" value="SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13421:SF16">
        <property type="entry name" value="SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12251">
        <property type="entry name" value="SNAPC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="343" mass="40078" checksum="3032013F4AB265CB" modified="2025-10-08" version="1" fragment="single">KTSKNKTISNSDLEYLRTGDHNIVKSDLFVKKYSKLLSNLSKLEKKYSKYSKNDDFSIEDLKIKSFEEEIESFIGANANFISGWNHWLTKESKETAYAKAHSINIPDIKKFKDAIEKIKRQNYKTCNKNLKESKNNSITNQILESFLKKTVFTKGYKQIASNSLLFRIEITNFGENAPFLEILMLGDNTLSSLRNSIDCPNYSQSINGFNIKNKLLDKNKHILKDIETKNNGYFFIEGDFYEHGNGSYSAEIRNWAKNNENVSTNFTFNALPKRMDKRIKEVDLRIDSIYYYCHKGYCKHFVVVKEMRMVSKDDIQNYYCYPLTVFKRKDKLLKCQICENGYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG0</accession>
    <name>A0ABV2AQG0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA polymerase sigma-70 region 4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001647">
        <property type="protein sequence ID" value="MES1921701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="Sigma3 and sigma4 domains of RNA polymerase sigma factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA polymerase sigma-70 region 4" evidence="1">
        <location>
            <begin position="29"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8677" checksum="3B249375CEC0BF28" modified="2025-10-08" version="1">MNAKNKTKRQDVKNIQTLSEYKQYRDSLKLTDEQKELMDMVFVRGWSYNMIADTIGCAECTVKRKMRKILDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI9</accession>
    <name>A0ABV2AQI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003214</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001628">
        <property type="protein sequence ID" value="MES1921683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8243" checksum="DFD5B8A79099D277" modified="2025-10-08" version="1">MNITDSDHCQKAPPLSDITCLNMYCKLPSRNKSTGKADELVATAGSRYRIQRLLMGHAVTRQGNTFTRRALRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ8</accession>
    <name>A0ABV2AQZ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001758">
        <property type="protein sequence ID" value="MES1921787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000915">
        <property type="entry name" value="60S_ribosomal_eL6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01159">
        <property type="entry name" value="Ribosomal_L6e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="13"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8762" checksum="3B25CAD8A105A60C" modified="2025-10-08" version="1">MKKPKKLKSDVLMEDEDDKTIKAENEKNKAKLEELQNIIDAEIESKVKKLEFMTEYLSSRFALKKGQYPHLMKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR13</accession>
    <name>A0ABV2AR13_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Superoxide dismutase copper/zinc binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003625</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002232">
        <property type="protein sequence ID" value="MES1922110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.200">
        <property type="entry name" value="Superoxide dismutase, copper/zinc binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036423">
        <property type="entry name" value="SOD-like_Cu/Zn_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024134">
        <property type="entry name" value="SOD_Cu/Zn_/chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001424">
        <property type="entry name" value="SOD_Cu_Zn_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10003">
        <property type="entry name" value="SUPEROXIDE DISMUTASE CU-ZN -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00080">
        <property type="entry name" value="Sod_Cu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49329">
        <property type="entry name" value="Cu,Zn superoxide dismutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Superoxide dismutase copper/zinc binding" evidence="2">
        <location>
            <begin position="14"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="12614" checksum="3B5DDB6BEE3BE247" modified="2025-10-08" version="1">METLMSKYADKISDNEHYNPDENPHGCLSKSSRSGTRHLGDLGNIDVDSMGSARGLKKVWMDKPIDLIGRSMSISSNPDDCTTQPDGKSGDSIGFCTIGYYSGDVEMNNEDFDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR75</accession>
    <name>A0ABV2AR75_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Replication factor A protein 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003675</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the replication factor A protein 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002308">
        <property type="protein sequence ID" value="MES1922159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013970">
        <property type="entry name" value="Rfa2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08661">
        <property type="entry name" value="Rep_fac-A_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="88" mass="9162" checksum="3B2049BAAC47895B" modified="2025-10-08" version="1">MSSKLAARVNHEQLVNFVGEKVKIVGKIVSASTGSAQLETSDGQKISIMGSSPEYSSSIAEITGTAVNANSVREISSVSLGDNFGKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC1</accession>
    <name>A0ABV2ARC1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">T-complex protein 1 subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003478</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001983">
        <property type="protein sequence ID" value="MES1921953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="entry name" value="TCP-1-like chaperonin intermediate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="GroEL apical domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="225" mass="24384" checksum="ECA3F4B228F1092E" modified="2025-10-08" version="1">MAIEHADFEGIERLALSLGAEIASTFDNPEKTKLGHCKLIEEIMVGDEKMIHFSGVEQGKACTIVLRGASSHLLDEVERAIHDALCVVSLVARDGRTIFGGGCSEIRMAKDIERLAPGIGGKEQLAVESFAGALKELVAVVAGNAGLDRAEIVANLRSAHYRNDTTAGLDIEKGRIGDMSELNVIEPFLLKDSILDKAHEAVQMIVHTDDIIRCAPRPREQDQCM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI7</accession>
    <name>A0ABV2ARI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002504">
        <property type="protein sequence ID" value="MES1922275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7708" checksum="7339C918FAE6F186" modified="2025-10-08" version="1">MHIHYRTSVRKERSDKGKGAKRKKDFLSVRKKAAAADAEWLGMKGELGVWYEGFGCEKRDTKWYSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM8</accession>
    <name>A0ABV2ARM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Tripartite motif-containing protein 45</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TRIM45_3</name>
        <name evidence="3" type="ORF">MHBO_003845</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002609">
        <property type="protein sequence ID" value="MES1922338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd19756">
        <property type="entry name" value="Bbox2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047153">
        <property type="entry name" value="TRIM45/56/19-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000315">
        <property type="entry name" value="Znf_B-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR25462">
        <property type="entry name" value="BONUS, ISOFORM C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR25462:SF296">
        <property type="entry name" value="MEIOTIC P26, ISOFORM F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00643">
        <property type="entry name" value="zf-B_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00336">
        <property type="entry name" value="BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57845">
        <property type="entry name" value="B-box zinc-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50119">
        <property type="entry name" value="ZF_BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B box-type" evidence="2">
        <location>
            <begin position="74"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15583" checksum="E1A7EE731DE6623E" modified="2025-10-08" version="1" fragment="single">MITSEDPQARAQDVKRCQLRPGKDRKFAAKMVCNTCQVNRCKDCAGHHITWNPTIRHDVITFECKKSEIIPLDCKRHKKQKCERFCEQCDTPVCLKCLVSGSHENHQVPQISEIQSSRQKLIKRDTHELESNIAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP9</accession>
    <name>A0ABV2ARP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003846</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002611">
        <property type="protein sequence ID" value="MES1922339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="82"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="17806" checksum="8424D49E618F573B" modified="2025-10-08" version="1">MLKFIFSDQSFKICNGTLTYGVKCPEENSEPTKGPPEGYDNTTARMNEKNSANKSEYQKGPPEGYDNTTARMNEQEQESNKLIIIIISITISILVSIIIIIVMCMYWKKISLQRVLSYIRNLKCHHTNDPNNTITSTEGNGQEVNLLNQTNSSIPVDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS1</accession>
    <name>A0ABV2ARS1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003878</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002679">
        <property type="protein sequence ID" value="MES1922371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BZIP" evidence="1">
        <location>
            <begin position="18"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13260" checksum="01BCB1BB633697CB" modified="2025-10-08" version="1">MPTTFEMFSPEKLDEYDRKKKNRESAKKSRFKAAVRNRQIAEEHKILKIKKNSLKSTFDREQSNYESIIKVLKDTLEIKQGFNKIVGMDQTDKNILLLDNSELKNCMIENFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV7</accession>
    <name>A0ABV2ARV7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein RFT1 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003924</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Intramembrane glycolipid transporter that operates in the biosynthetic pathway of dolichol-linked oligosaccharides, the glycan precursors employed in protein asparagine (N)-glycosylation. The sequential addition of sugars to dolichol pyrophosphate produces dolichol-linked oligosaccharides containing fourteen sugars, including two GlcNAcs, nine mannoses and three glucoses. Once assembled, the oligosaccharide is transferred from the lipid to nascent proteins by oligosaccharyltransferases. The assembly of dolichol-linked oligosaccharides begins on the cytosolic side of the endoplasmic reticulum membrane and finishes in its lumen. RFT1 could mediate the translocation of the cytosolically oriented intermediate DolPP-GlcNAc2Man5, produced by ALG11, into the ER lumen where dolichol-linked oligosaccharides assembly continues. However, the intramembrane lipid transporter activity could not be confirmed in vitro.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Endoplasmic reticulum membrane</location>
            <topology evidence="1 9">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the RFT1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002747">
        <property type="protein sequence ID" value="MES1922413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007594">
        <property type="entry name" value="RFT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13117">
        <property type="entry name" value="ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13117:SF5">
        <property type="entry name" value="PROTEIN RFT1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04506">
        <property type="entry name" value="Rft-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="65"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="105"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00045912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="24519" checksum="6B040BE6D3B80C47" modified="2025-10-08" version="1" fragment="single">CSIGAVFAPFYSKSIIYVLYGKRWLSSGADVLLIFYVICIILEALKGISDALLNTLTKNEDVLGFFVTETISDLIGIFTFVVFATTYEFAYKSPFRQNPKFAKKIGVMTLVTGKFIGICMRLMASIAYSAWYSKQKKGDFGKTDQIDLFKKSLPPKDSMFMFFVVFVILLLSHHKFDIGNIEERYLRRVFSHSVVGLACLFFCALKFYSDFNKFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS53</accession>
    <name>A0ABV2AS53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003746</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002448">
        <property type="protein sequence ID" value="MES1922238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943:SF2">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="30518" checksum="644CC702D8022ECF" modified="2025-10-08" version="1" fragment="single">IAFDIAETTDRQLIKRVVENLMIPFYCDDETVELAGTKIKLEEILENAANSGASFNVEKSLTALNETKQTFKKLRENGAKITKDDLIKISSHFFPEHFARATTIRRILTGHFLDFLQLQFLYGACKRGAAELGAVLQSVGNKNPISTGALIIAHGFARCGTAQDGFVRRNTSWFAECSNWTKFSAVASLGVVHKGNALEFEKLLKAHLPQNGVRRSPYQEGGALFAAGLMHSGHGTERLDFFVDALKKSDGNEIVQNGVFFGFLLFFVRDFCNFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS72</accession>
    <name>A0ABV2AS72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004038</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003013">
        <property type="protein sequence ID" value="MES1922521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22242" checksum="3BC52151E7607A32" modified="2025-10-08" version="1">MFGIQQVLFLLPYITINVIFCRELILCQNWGHNQLIRNSRQQQRIESLFKGDAPDKGEYQMPKSKSSYIIVDNIDITRSPFQMSVDRKRQIWYCVLLVALEKQAVEPTHNDIHPIAGISQVNNSVFIPTLEKSVVLNNNFIHHIMHAQVLAKYEDSLIKYKSCIPQCINHPNLNATLSLLISWTRVKISLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB9</accession>
    <name>A0ABV2ASB9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">IPO4/5-like TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003807</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002547">
        <property type="protein sequence ID" value="MES1922298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040122">
        <property type="entry name" value="Importin_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057672">
        <property type="entry name" value="TPR_IPO4/5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10527">
        <property type="entry name" value="IMPORTIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25780">
        <property type="entry name" value="TPR_IPO5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="IPO4/5-like TPR repeats" evidence="8">
        <location>
            <begin position="102"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF25780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="26393" checksum="1168C76566E47E90" modified="2025-10-08" version="1">MQQNQLRLVETLIENIQSPDESVRSPAELQLEKSFTENGSQALMLLGQVSAQSTNSSVRSMSFIVMRRNLIKTDYEVYNKLPEDGRNGLKKLCLGAFEKETEDLVRRQLITFISEIAELELPRNGWPQLFPELARFTKSQNILLRGDAYLIFGDIANITDLDENQMKGLKAVFANGLSDGEMGVRLKSFGAVVAFSTKAADSISKVLDVKFFLVNYIFYFFDKIKFFLKNFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC6</accession>
    <name>A0ABV2ASC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004077</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003097">
        <property type="protein sequence ID" value="MES1922562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045689197" evidence="2">
        <location>
            <begin position="24"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24941" checksum="6F3D8C5773FC20C3" modified="2025-10-08" version="1">MNIFKTTIIVVFVLTNCRVKCLSEEITKTMKKVLGKNSIEDLYDMTEEEMAAQKEKVRLFEERMKNAKHGDDGVDIRVLHSKNDFVDSEIEMAFKEHFQVFNNGKKKSTLTNKQKETLKKLRDEFDHSEDDENEEYLDEIEDGYISKLLEYKSKKRRKPNNNFAKKVIRMQRENQEEYIKDRRKVDGYFLNILKIFFKIEQFAKHTEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE8</accession>
    <name>A0ABV2ASE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004102</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003153">
        <property type="protein sequence ID" value="MES1922588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11775" checksum="2D38C4BBBBF2C377" modified="2025-10-08" version="1">MSSTHVTVKPTELLFKYQFFYSNPLNMSLENVLDTLPGDKSRMVLEIIESLVNKTLDKDMQGFSEENVFGILTKEQQARLVEQSIFQIAKSKILYILYTHVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG3</accession>
    <name>A0ABV2ASG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002714">
        <property type="protein sequence ID" value="MES1922391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="87"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15972" checksum="90E14E1FC597C8DB" modified="2025-10-08" version="1" fragment="single">MRSEEELKRKSIKEKLEKLESKKSDLQEENKAFRGKISEMEKSIKSIETKEKAVDKKLKTLEKVNTALLIKQGNVRKEFDALENKKKLFYNDALERKKNRIKELKDEIEDLKKHLDIEEKLKKRDALDGGNMIRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG4</accession>
    <name>A0ABV2ASG4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rapamycin-insensitive companion of mTOR middle domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004129</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003220">
        <property type="protein sequence ID" value="MES1922611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029451">
        <property type="entry name" value="RICTOR_M"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14666">
        <property type="entry name" value="RICTOR_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rapamycin-insensitive companion of mTOR middle" evidence="1">
        <location>
            <begin position="12"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="28613" checksum="93CD649DA90772D5" modified="2025-10-08" version="1" fragment="single">RENFNLKSYDKQSIANEYCDVLGILSETEWGLKYLKKQNIFQKIESIMKPQNSSLHFYTKTEKLVFCLVRCLDYFVPENRDFLKTIFKRASIRLSRQIVCLLLSLYHLGDKDICHWSVQMLCYKLNEKSVVGFDVVKTLEKILLITDQKDILRLLVMQQANFLEIHNFGIYFIIRMAEIKSGYQKMNELKLTDSILSIWKKHNGGQLFVRKLHYDFMFLMKMQSFYLKSVLPGKWNFDRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY1</accession>
    <name>A0ABV2ASY1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004294</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003642">
        <property type="protein sequence ID" value="MES1922770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046449">
        <property type="entry name" value="DEGP_PDZ_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="26216" checksum="00E2144BFBDA0235" modified="2025-10-08" version="1">MQGMSIVPLTINLIEQDMIQQSFSIPELVALVEGKKTFQNQTGLVLRVTPGTPLEEIYRPYHNSIVTEINGFSPRNLSEAIIATYRPIKNANGSFVTVRFSDNRLLVFDANVFMETNDRLNMAVGMENNYRSSIFSELKSCSCVSGALKIGQDHLICNICNQKMAEVATKDGMVSLKAYTPASNKVLEKELMKGGNNVVEEKMSGIAKEVSGRFGKAIYKGTTNEMREAVSPSTAVTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT85</accession>
    <name>A0ABV2AT85_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein yippee-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004408</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the yippee family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003954">
        <property type="protein sequence ID" value="MES1922879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.20">
        <property type="entry name" value="Peptide methionine sulfoxide reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034750">
        <property type="entry name" value="CULT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004910">
        <property type="entry name" value="Yippee/Mis18/Cereblon"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03226">
        <property type="entry name" value="Yippee-Mis18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51788">
        <property type="entry name" value="CULT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CULT" evidence="4">
        <location>
            <begin position="3"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU110713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14111" checksum="C08B08CAF9D5801F" modified="2025-10-08" version="1">MARQVFNCSSCNNRLGNLSQMLLYQGKQFHTFQNLSGTVFNSFIVKKARLSVSENSYRDASWFEGYSWREASCFLCGKHIGWAFERDSGEEKERNGEILDRNDVEKYDEFVLVAIRSIKFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH7</accession>
    <name>A0ABV2ATH7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004226</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003469">
        <property type="protein sequence ID" value="MES1922703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="6270" checksum="0FDA48EC1C4A47E0" modified="2025-10-08" version="1">MIAEIQPIDTAMENTYLDKIKDICDNEKSTRELLCKVIQERRKQRRDRCMQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ0</accession>
    <name>A0ABV2ATJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004517</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004248">
        <property type="protein sequence ID" value="MES1922985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6842" checksum="CA26EC63759A543E" modified="2025-10-08" version="1">MHGVKEMEFFVMVACRGFPVQSVFVAVRVTRQYRGAAVQDMRHLSNRDGIVLNTIEKSQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM6</accession>
    <name>A0ABV2ATM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004545</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004362">
        <property type="protein sequence ID" value="MES1923011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16595" checksum="6AEF8C5CCC0B3D19" modified="2025-10-08" version="1" fragment="single">MGYVKAIGFLILATIALMLFSKESDVPVDDNYIRRFYESNFAFVAFFVFSIIALNIFVIWHYKFSAPHIDRRTGLNDDSEDDEDKDIVVTPPPYSNAVSTNPIGDSPPPYSEENFDSRTIPTSGNNNAVINRDTIYNNNDGGALTGEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU60</accession>
    <name>A0ABV2AU60_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BRCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004737</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005053">
        <property type="protein sequence ID" value="MES1923192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029710">
        <property type="entry name" value="LIG4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45997">
        <property type="entry name" value="DNA LIGASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45997:SF1">
        <property type="entry name" value="DNA LIGASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00292">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BRCT" evidence="2">
        <location>
            <begin position="51"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17756" checksum="40840221F50F2C63" modified="2025-10-08" version="1" fragment="single">FTLRFARIKRVRYDKNWEDCLSFHNFLEINDEKLNRNEKTFDDLAESAEFCQNNIFSNFNFYILNGNKDFSKKEIEKLIKENGGKIHANPIFDKTHFIVVGSEEEAIKSSKYQNLVKFDCFKILKLSFIRDCVKNNQFSNLDFRFSIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU66</accession>
    <name>A0ABV2AU66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004758</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005125">
        <property type="protein sequence ID" value="MES1923215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6979" checksum="CA01EA62EDA45032" modified="2025-10-08" version="1">MLNQLISYSGEYSEIDGDERLYTLADAVDKKTLARALQTNMTLDDIRDSIEKQGFIKYVCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB4</accession>
    <name>A0ABV2AUB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HECT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004555</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004390">
        <property type="protein sequence ID" value="MES1923021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00632">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="HECT" evidence="3">
        <location>
            <begin position="1"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="17383" checksum="FEB8C810CC674387" modified="2025-10-08" version="1" fragment="single">AFTTKTLVPCLLPRLFYRFLSQESPNRRDLEQIDFSICKSLLEPLEKLESEKDFENLGLEIKFGTELGKYVSPKLIGEMVNFGNRLEYSKAYEQWLLHEKYGAGLKLVCEGFWDIFFPELTALYTSEMLRNGFLINFYKIAKNFQKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK7</accession>
    <name>A0ABV2AUK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005817">
        <property type="protein sequence ID" value="MES1923360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="14625" checksum="03EAEDE6996886A6" modified="2025-10-08" version="1" fragment="single">GTAERIVSTCGNPDALNSLLLNQCILDVISLLYDLGLLEENAQPTVQQQAELDKIIKRGDCRGARYQGYNEDTRSPVWTPMQGRVDTNFKVRLQKGGEIVTVDDQCTITAKFFGYEVNKPTVLKETYIISP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ8</accession>
    <name>A0ABV2AUQ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004969</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006024">
        <property type="protein sequence ID" value="MES1923403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="17186" checksum="618E4DF6FE72B91B" modified="2025-10-08" version="1" fragment="single">DIFEGVGEAMAAGGTIGGGIRTAANIPRMPKAAKETAQSIGNIRNKFGGVNLQANPKVNYEIGRAVDMTGELEDINNALVVENDPATRDELIRRRKEINNKAGTASFYKAIDELDKAGVSLTPEALDLEIHEGLSRNSRKVGIGAELAGFSPKDIKKARRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT3</accession>
    <name>A0ABV2AUT3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">K Homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004778</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005216">
        <property type="protein sequence ID" value="MES1923234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="entry name" value="K Homology domain, type 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10288">
        <property type="entry name" value="KH DOMAIN CONTAINING RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00013">
        <property type="entry name" value="KH_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50084">
        <property type="entry name" value="KH_TYPE_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="K Homology" evidence="3">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="3">
        <location>
            <begin position="77"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="16586" checksum="0CA0B45B5B890A9D" modified="2025-10-08" version="1" fragment="single">LMIPSEKVGVVIGKGGEMIQDVMSKSGALVKVEREHNPNHPSVREVQVLGAPEQVAYAIQMVKELCNERSIRNNGQTEYEETMAIPQNLVGIVIGKAGETIKNIQRLTKCSVQVVSQGDPLDPMSIKVVKFRGIAEEIAAAKQQINLLTGVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT4</accession>
    <name>A0ABV2AUT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004994</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006152">
        <property type="protein sequence ID" value="MES1923425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15663" checksum="3505DA2A73851405" modified="2025-10-08" version="1" fragment="single">NRKKKVLLKKPVLVDNSDKLEKLKNSYNSLLNKLNSDNFDKIFKSFVALIKEAGSTDFETFSVLLNAIFEKATREQRYSKLYCQLFVGFVRKFKGHKVSKIGEEESFRLEFRKLIMENLKTKFYEMKETKTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV3</accession>
    <name>A0ABV2AUV3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005012</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006208">
        <property type="protein sequence ID" value="MES1923440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13077" checksum="46F31F85369A7199" modified="2025-10-08" version="1">MACLTLARYQKTNLRVISGFIFSDARSLRTEQTSNDIKSASESLPVFARDSSSVTATSSPLEIIVTGLSVILCLGLIAYVGMAIFEKTVHIRNALHMGNTERNVHYENAYGATDPINFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV18</accession>
    <name>A0ABV2AV18_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase M16C associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005083</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006500">
        <property type="protein sequence ID" value="MES1923505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013578">
        <property type="entry name" value="Peptidase_M16C_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43016">
        <property type="entry name" value="PRESEQUENCE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43016:SF13">
        <property type="entry name" value="PRESEQUENCE PROTEASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08367">
        <property type="entry name" value="M16C_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M16C associated" evidence="1">
        <location>
            <begin position="12"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13324" checksum="CA8E5E35631C34E4" modified="2025-10-08" version="1" fragment="single">MTYMKDLELKEQNLLSEVKSEKVLSDEKILKNANLNDDLNILPSLDVKDITPKIQKEPVSVKTVNGLKVYESVQPTNGICHFSVNFDVENIVPVELRPLLPFFSVCLTEFGAGDLSSDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA9</accession>
    <name>A0ABV2AVA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005929">
        <property type="protein sequence ID" value="MES1923381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="18045" checksum="98D02E176780BB27" modified="2025-10-08" version="1">MAVQSLPYRLILSLLHLFETTRRLQEFLVRVGRHDIDFQFIEFKGTNLVLADDRCQTGLILNMKFPKYDCRPILLQWMMNAHMKSKQQPRLTLLTMKYRNLDMSFRLVSYIVDEGCDVSQCMQHYFDFRYTLSYCDSLVMKCKAVFILIYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB8</accession>
    <name>A0ABV2AVB8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">coproporphyrinogen oxidase</fullName>
            <ecNumber evidence="4">1.3.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">HEM13</name>
        <name evidence="7" type="ORF">MHBO_005185</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (O2 route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the aerobic coproporphyrinogen-III oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.3.3" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010007016">
        <property type="protein sequence ID" value="MES1923589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004109">
        <property type="term" value="F:coproporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1500.10">
        <property type="entry name" value="Coproporphyrinogen III oxidase, aerobic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001260">
        <property type="entry name" value="Coprogen_oxidase_aer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036406">
        <property type="entry name" value="Coprogen_oxidase_aer_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10755">
        <property type="entry name" value="COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10755:SF0">
        <property type="entry name" value="OXYGEN-DEPENDENT COPROPORPHYRINOGEN-III OXIDASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01218">
        <property type="entry name" value="Coprogen_oxidas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00073">
        <property type="entry name" value="COPRGNOXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102886">
        <property type="entry name" value="Coproporphyrinogen III oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="19118" checksum="C82891121A20CE41" modified="2025-10-08" version="1" fragment="single">KKIVEIGDESLNKDDFVTKHWWFGGGCDLTPSIIYPSDCKHFHSVYKKICNKYFHRSYDLFKKKCDEYFYIPYRKEHRGVGGVFFDDLNGDREKIFSFVTEMANAFELSFIPIVSKRLNLEYSDRQKEWQEIRRGRYVEFNLLFDRGTKFGMNRENAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWF3</accession>
    <name>A0ABV2AWF3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005168</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006943">
        <property type="protein sequence ID" value="MES1923573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="14862" checksum="F0D2B860768F05E6" modified="2025-10-08" version="1" fragment="single">MQPVAEVPILGGLGLQFATELAGVPKITFSYQDLAKIMDSEGNKITSGSIEEKQEGEETKLIASDEGFYSQTDEDGNLIPPCILLTKAMFKMRDEQSFYYALRDYKAYPQWKKFLELFDCHAEDNKESLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE90</accession>
    <name>A0ABV2AE90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000044</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="129"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20151" checksum="40BFA2925CEAFC1F" modified="2025-10-08" version="1">MSQHNCTLNGNNFGGYCYFVALENYRFKDEESDKLEKRAEIFCENSSIANKRRFEVILLVCELPKLQNGHLNGNCTKVTDGEFCTFWCNSDFEYQKGLNGRLNCTNVEGNYTFTQIPVCVEKETNKLPMILGIVGGIVGLLAIIAGSVVFCWQKKLLCFKERVVIEDVPTGQSFFSEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEG8</accession>
    <name>A0ABV2AEG8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000108</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="197" mass="21642" checksum="D9F45070B65F6B31" modified="2025-10-08" version="1">MKFTEKAKLIWKNHFALLSTLCFIKFAPALLRSLINNFISVQLSTIETSGVLRGLATASNYIAVFLTVSFFSHFSEWSNLGRSIIITAGVLITAVATFFIGLATKWYHFLILLVCSGIGDAASSSCVYSIILDAFPDTLWEFATSSISPFVFGSVIIKTKTAFVPMLTFSIVMAVVAICGAVSFYFTLRSVKARIRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEI3</accession>
    <name>A0ABV2AEI3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UDP-N-acetylglucosamine transferase subunit ALG14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ALG14</name>
        <name evidence="9" type="ORF">MHBO_000142</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ALG14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013969">
        <property type="entry name" value="Oligosacch_biosynth_Alg14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12154">
        <property type="entry name" value="GLYCOSYL TRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12154:SF4">
        <property type="entry name" value="UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG14 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08660">
        <property type="entry name" value="Alg14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357135" description="UDP-N-acetylglucosamine transferase subunit ALG14" evidence="8">
        <location>
            <begin position="24"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="200" mass="23074" checksum="D385C33E68CB7B0D" modified="2025-10-08" version="1">MVIMFAISLVIFTLPLIIYLCSTKNDPKCETLIFLGSGGHTSEMIRLFEDLDLHKYARLGVMTSFEDTLSRKKAEKRFKRIDRVSIKLPRARRVGQSWLTTIFSSVFCLVIATKKLFHANPKMVVTNGPGTTVLIYLAVRILNSFLCRNTKFVFVESICRVKTLSLTGKILYFCGCDKFYVQWRELKAKYRNALYLGRIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP0</accession>
    <name>A0ABV2AEP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000172</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000022">
        <property type="protein sequence ID" value="MES1918161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357128" evidence="3">
        <location>
            <begin position="22"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="300"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="347" mass="40486" checksum="F0DD62BB22E2C6AD" modified="2025-10-08" version="1">MSKNKVLIILLSFVCLRLTYQNPHSIEARFNNIKNMLGYGSYAKENLVKNNDDYTEDEFEMSNNNSDPDDDDDTENNVEDNKNENENKNEDDDENEDDDNSQNKNKNKNENKNEDDDDENEDDDNSQNKNKNDSENEVEEDDDKEFLMESYSPNNKKKNIKKVIYDAVDDKKQETFKEDDMAPISKEEMNKLKRAKEPQILKPKLKGKEVLGNNDFVQATENISKDNNDIEGKDDLENMVSGILLNAKGISTEENFFAQHNAKLVKSETKFEKIDGEDKKVVMKQYIVEDGEDDKYRTIFLLRSAAFILGVALIIQIYHYTEREEPMNRKVLLTYNNLDKDFFYYLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEY6</accession>
    <name>A0ABV2AEY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">FAM192A/Fyv6 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000255</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000034">
        <property type="protein sequence ID" value="MES1918261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019331">
        <property type="entry name" value="FAM192A/Fyv6_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10187">
        <property type="entry name" value="FAM192A_Fyv6_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAM192A/Fyv6 N-terminal" evidence="4">
        <location>
            <begin position="26"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="28"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="18167" checksum="BAF25DD30B8BCFC8" modified="2025-10-08" version="1">MDFVRSEKLVSKDGFSYNKPFKHNKNIRKSEETKKQKIRSLYDQLKENKKEENRTFIKNQPPKAVDEDEIKYLEEQIQTDKIKQIRLKNNEIVEKENFDRLKKVRSKIEKTFEIKKEKKRKFDSAIYLKSIKKENFKIKKAIVDYSSSED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEZ2</accession>
    <name>A0ABV2AEZ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000054</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051503">
        <property type="entry name" value="ComplSys_Reg/VirEntry_Med"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45785">
        <property type="entry name" value="COMPLEMENT FACTOR H-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45785:SF2">
        <property type="entry name" value="COMPLEMENT FACTOR H-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00032">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0768">Sushi</keyword>
    <feature type="domain" description="Sushi" evidence="4">
        <location>
            <begin position="51"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="4">
        <location>
            <begin position="176"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="4">
        <location>
            <begin position="238"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="4">
        <location>
            <begin position="297"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="4">
        <location>
            <begin position="361"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="495" mass="55393" checksum="B59AE725BE2631F5" modified="2025-10-08" version="1">MYAYLYKPCRLTKNNQKCSSNCSDYENYSLVSEIFCRDGIWSDTLYCRKNCDFSGLNIENVDNESLQKCKNTKYGDKCPFKCKTGFKSEGILHCNESKHNNTAKCTQVCFGKPNIDYKSHVIIPSECADLNLNKTCDFRCNGLNSAKTGKVVCDATGNWNITAKCRNGNFVKFAECTGRPQVNDQEIRIFGNHRKFENETYNFECQDNMLPEGEIKCVFDRTKNKADWLSTAKCIKVCNDMPKINTTLITLPENCANSAIKKQCPFQCALPSYFKTGKITCTEKRVWNISAQCQKGCTYLPRLLQRSAILVKSDCNNTKLNHLCDFQCLENGTAKGEIKCVEAGDSTAKWNSSSAKCLKACKLVPSIAKAETSNLKKCVNRPDNSSCVIKCRNSYYLIGKDPTCYDGTWNTSKSFCGNRPITKTETTLTRSIPVNAAAAVAAAIGTISVIISIKTNNALPNIHLDDFEDINPPMDGDINNLEMEEPEIFIIENQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF12</accession>
    <name>A0ABV2AF12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000272</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000037">
        <property type="protein sequence ID" value="MES1918285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046986508" evidence="1">
        <location>
            <begin position="23"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25300" checksum="61BF5CDE5B70FE7F" modified="2025-10-08" version="1" fragment="single">MDSFKVIIAFLLFFRLSVTSLADDIDHLYEGKTAKVEFAFKTNDSDLNKIAASKTDFDDITFSVNFKFGKKCNISNVYIAKIFKAFMDKWISNSKLKNLTLEEFEKIASNNTLPSFEIEMCPVSNVEVIKAVVKYLRNIPSRKNGTNGNELAFRILGIVIMVKQRLGVEDFGTYNREIGLFDNINLLYNNFIANSSLAKIDVFGKGVTIKSQILALENALMNET</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF46</accession>
    <name>A0ABV2AF46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000282</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="320"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="100"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="7"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="325"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="348"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="411"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="437"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="466" mass="52531" checksum="CE5093E65CAFE817" modified="2025-10-08" version="1">MTDSKPQKPKNKKRSKKSQGESLLKEERINNFDDKNNEYLCAIIKRARNLRKKVKHSEKIQKKVDGGAVVQKEEKETLANKKKMEFAVKELEQLIFSMKKLAISEKAEQLRQNREQKRQDKAAERSFDSRAEKLEKELLKKARDQLEELEEKNKLEIQQTREEADREAEQRTSNAFLELHFASKFVQSINDKELLFLFNEINHFLENDAKSQYFLPASQSDLTYLQTLVMQILPGQSQIGAVSSAKDEFANSENLFRNYCCRSEDPVDGVNAVYSFRRLRTVTKAIATSSIFYNRFPQSKPAQIANIIVDDSKAGEGFLPSGDLNGATENTGTAAAKANLRNSGKSDVGSEKKDDGKRKDFEVPKRVPVEENETRGRLDAKRGAANKKRGGKDARRGNKVKRGGANVGRGGRGRRGTRGRGVRRASNTGRTRFKRVGGKDEKKEGVSKAPAKIAVDGKMTSLKTDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF79</accession>
    <name>A0ABV2AF79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">proteasome endopeptidase complex</fullName>
            <ecNumber evidence="3">3.4.25.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">PSMB7</name>
        <name evidence="10" type="ORF">MHBO_000300</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Cleavage of peptide bonds with very broad specificity.</text>
            <dbReference type="EC" id="3.4.25.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000041">
        <property type="protein sequence ID" value="MES1918316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000243">
        <property type="entry name" value="Pept_T1A_subB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF4">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA TYPE-7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00141">
        <property type="entry name" value="PROTEASOME"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="8 10" id="KW-0647">Proteasome</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0888">Threonine protease</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="28095" checksum="3CA455940E8ED9AB" modified="2025-10-08" version="1">MSFNYSKNKSIGFENVNRNKKFEKELNAKPQIRKTGTTICGAVFKNGVILGSDTRATSSSVVANKETVKIEYLADSIACAGAGTSADCSNVRKIMCSKLELLKMATKTQPRVAAAKRLIQRHLFEYQGYVSAYLIVGGADFTGGHLYDISATGAVFKVPFIADGSGCLAAMSMLEAGFRDDMEELEAIELVCKAVKAGINNDLGSGSNVDIHVLTTDGAKVLKGYFRTESGTVEIDSPVIPVGSTRVLGNEEILRESAVAMAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF99</accession>
    <name>A0ABV2AF99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000339</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000048">
        <property type="protein sequence ID" value="MES1918366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="114" mass="13291" checksum="A78B32F6EE1F553D" modified="2025-10-08" version="1">MDVLEKSINSDTKLRHFSEKKKYLFKHEKGGYLLSLIATLIGFVLTSNSQKVFSMNNFKNSKAFKRTLEMLSQRDVVIEDVKKCLRDYLKFMEGTEGNKPVTREILENILKLIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB4</accession>
    <name>A0ABV2AFB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000349</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EF-1-beta/EF-1-delta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000050">
        <property type="protein sequence ID" value="MES1918379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036219">
        <property type="entry name" value="eEF-1beta-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049720">
        <property type="entry name" value="EF1B_bsu/dsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014038">
        <property type="entry name" value="EF1B_bsu/dsu_GNE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014717">
        <property type="entry name" value="Transl_elong_EF1B/ribsomal_bS6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11595">
        <property type="entry name" value="EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11595:SF21">
        <property type="entry name" value="ELONGATION FACTOR 1-BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00736">
        <property type="entry name" value="EF1_GNE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00888">
        <property type="entry name" value="EF1_GNE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54984">
        <property type="entry name" value="eEF-1beta-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange" evidence="4">
        <location>
            <begin position="34"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13398" checksum="63134BE9A1DD3747" modified="2025-10-08" version="1">MTSEDDFDISEPSDSVDLESLKKKNKADTSLGTRAQVVFDVLPEEAETNPDFLEKVVKTVVMDGVEWKNFEAMDLAFGVKKLRVSSIIANNVSMDEVEEKIKTAAKDKVQLVETVSMRNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF0</accession>
    <name>A0ABV2AFF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Translation initiation factor 3 subunit c</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">NIP1</name>
        <name evidence="2" type="ORF">MHBO_000014</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1917977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="617" mass="68967" checksum="C6ED1803D310FE29" modified="2025-10-08" version="1">METYELVSSGDFSEASDYDSSEVAESSESSEVEDLDKHKIARDFWLRKETNLGPKKRRQRKKETDARRFGEKKADAPGSEDVKLGAKALAVELTKPSILKRGTRSNSFETASDLLRIRSAAANAELAALVDIHVFRFLRNALEEAFGETEHEKIWKVSADCLGRSLSFLESDVKSKLADFDSIRDDLEKKETKECDSEDKAISENEHKERFAKISEMAKSGELLNSICGFLLSLSAYLENRTKSHSTLEQLESDVKKEEVLRALVKRAKSVFTEAGDEKTTLLLSEALLNICFQDISPKPKSDFDRTHFSVEEFKAHNPLDLAFFVLSKSPSTEERSRMAVLLQLATLYSVNDFPLKAHRLVRTLGPLMGAFPEDERLRVLFNRASALLAVSLFRNGLFDDCARLCQAIFPVRRTQIGQARDGNANNVSALRHFDVEDVEAAHYFSSLFVEAEQQALVAAGRPLGDRLDPENGLVRVAATRKSKSIFAQNGVALRDFAVRCLDAISKADWKSFVEEMDQMCAVSAPMGDFWPREALLAKAKESSLKVFCLRFGGNFRNLSVARLERRFCIKEDKVRELLREISLGNGESSDGKLNLGVRRISAIGRSLLVGATLLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF5</accession>
    <name>A0ABV2AFF5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Nuclear speckle splicing regulatory protein 1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000362</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NSRP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000053">
        <property type="protein sequence ID" value="MES1918391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018612">
        <property type="entry name" value="NSRP1_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09745">
        <property type="entry name" value="NSRP1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nuclear speckle splicing regulatory protein 1 N-terminal" evidence="5">
        <location>
            <begin position="2"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="78"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="29"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF09745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="19218" checksum="3997EFF6A7309C37" modified="2025-10-08" version="1">MAYERSQIRERGKDDFLFKDKPVLVTPAYRNVLEQRRKLARQIEKEERKNLTEKNNAVESELRFKQALFAEKLGESKLNKSENKDFEREASAKAKPVSEELVSKDQERKGSKESQWKEKYGLPEIKTFDRKKENFGARRNCEKDLNAARERYLKRKAELADF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM5</accession>
    <name>A0ABV2AFM5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glycoside hydrolase family 19 catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000463</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000073">
        <property type="protein sequence ID" value="MES1918499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00325">
        <property type="entry name" value="chitinase_GH19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.530.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.20.10">
        <property type="entry name" value="Endochitinase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016283">
        <property type="entry name" value="Glyco_hydro_19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000726">
        <property type="entry name" value="Glyco_hydro_19_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595:SF79">
        <property type="entry name" value="CHITINASE 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595">
        <property type="entry name" value="CHITINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00182">
        <property type="entry name" value="Glyco_hydro_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001060">
        <property type="entry name" value="Endochitinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="Lysozyme-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0611">Plant defense</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046947148" description="Glycoside hydrolase family 19 catalytic domain-containing protein" evidence="3">
        <location>
            <begin position="20"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 19 catalytic" evidence="4">
        <location>
            <begin position="48"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="32319" checksum="0F05F632283838AB" modified="2025-10-08" version="1">MVSKIILLFLTNILIMVQSDSINQEVDGDLKYDIKTLISEKDWSTLFPVQGIRGCHGAELLSHKNFVAAVEEVWAKGSKFLRSKNMQQNRVELAAFLAQTSHETTGGYDGAKPPRYFWGYCFPTEISHANKYCSEASAATCKANHYDCKCVPGKAYYGRGPIMLSWNYNYGKFSQSYFKDNRLMANPDLLEKKGDIAFIAAIWFWSTPDYSKPSCHDVILGITKPSDVRGRDVGFGLLTDIINGGLECGHGNDKRENDRIGFYNHYLKYFGVSDNRQKSCAHIRPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ2</accession>
    <name>A0ABV2AFQ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000456</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000071">
        <property type="protein sequence ID" value="MES1918492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12119" checksum="A108F655CBD643D5" modified="2025-10-08" version="1">MLVFLSNLGENDLNPFINLIFAHLNAEKLNKTKNGKIEHKKPNLNKITKILTDFAKYFKKETKVHFGRFFDIAQTVFVKVLNGDEKKTKSLIFSLLIDYLDKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT1</accession>
    <name>A0ABV2AFT1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-binding cassette sub- F member 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ABCF3</name>
        <name evidence="4" type="ORF">MHBO_000286</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050611">
        <property type="entry name" value="ABCF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211:SF117">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211">
        <property type="entry name" value="ATP-BINDING TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ABC transporter" evidence="3">
        <location>
            <begin position="208"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="291"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="365" mass="42437" checksum="C7A58DC8FB3B63C3" modified="2025-10-08" version="1">MEEIAKKTEIANFVESNLAAIRPEIAKFLSAIFYKQIERKSVSDLNSFAAKNKELMVNQLKLLKEKEFEDFNSKIFDKFLRNQKKATNFEMEILKFKEKPHFQEKLSSLIKPMSFNECFESVAPKNNKIAHKNKFGFYQLDLIDKKKKSKEQKQKSYDKIKYFSDEWEKQSKEIILKNWLKQPTASLNDIFISKYSMSTIDGTKRLLEETDLKLVRGKKYGLVGLNGVGKTTLLKRISRYDVKGIPSATKILYVEQEIKGDDTTVLDFVLKSDVIREHLIARKTALIDKMKTENGEDLENHQNELSEIEEKMADFEIDKSLAKVGKILSGLGFSKKMEQTKTKHLSGGWRMRFSSSTFWLILFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY3</accession>
    <name>A0ABV2AFY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000511</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000084">
        <property type="protein sequence ID" value="MES1918557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11037" checksum="3A20DEB996600B20" modified="2025-10-08" version="1">MSSLNKSSSNFSDVSSFPSRKKLSLETRHSQNTKFSDFSSANLSSNLSQSNTLSLRTPSKNIRKKPSSNISKTPSVKPQFVVALSEYRNRYFWYCFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ8</accession>
    <name>A0ABV2AFZ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000543</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000091">
        <property type="protein sequence ID" value="MES1918596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="26369" checksum="3E4B083A075CEA5D" modified="2025-10-08" version="1">MLKIKRSLTRTNTQIVTRSAFCAFRQKRFEHVEKTHLIKEEEELDKIAPKFYYKEELDTIKKINKAKFSDLKQHSLQISKMRLDELKEIPKELPYRDEFKKHGLDLPANLLEEDDKKRDYIRCAKAIKCAIENFSDDKIVRVYAYICQDIRRVEVPAEIPGMEKFESKFDSDRVTFARTRIEYALKFNEKPYFIGDYMKRLGEKVARRYYADKLDKLGYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG46</accession>
    <name>A0ABV2AG46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000561</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the THOC3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000095">
        <property type="protein sequence ID" value="MES1918617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040132">
        <property type="entry name" value="Tex1/THOC3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22839:SF0">
        <property type="entry name" value="THO COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22839">
        <property type="entry name" value="THO COMPLEX SUBUNIT 3 THO3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="56"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00046343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="36985" checksum="B29424DB06DB8D10" modified="2025-10-08" version="1">MSETFLESHIWDSSTRIKSISLNKAENKILFGCDDGVIRFYEIYNNKFKIGTEIEFYGHKKSVENIIWTDLSNNHFVSFGSDGVINFWAIISKTPIKTISTESKYTGLSINLKDNIFSVCFSNDDGGPEPKGIEFYDTKLETLKFRQKLSHRAQFTNWVENNNKFVYSTYNVITISEFRNQNDKIELNFVEKLKICSDAATCTSLNITDDEKFLLVGSTDSSITVFSTKNWTCLQTLYPFPSTIKAMTTISDLSLVLSSSSKPSIMLSDFKSTENKKVFLLHRTPKFLVYGQNKKFVVCGYDSKNGSTKHDYCASIFDEKDILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB9</accession>
    <name>A0ABV2AGB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000591</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000101">
        <property type="protein sequence ID" value="MES1918657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16246" checksum="0C8F57D1F0453DA4" modified="2025-10-08" version="1">MFKYNGEDYIFGGTKTVHRVGKLNDGFEQFDNDTNELCKSVFKSFYDYWNRFELFSKEILKSKLISGYTACGEFEDGKHMIPLPMGENARLAMFGLIENVGSVNNKVDICEEVSEAINFYKSAEFNTVDINILRSLNGKSNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG0</accession>
    <name>A0ABV2AGG0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphatidate cytidylyltransferase, mitochondrial</fullName>
            <ecNumber evidence="6">2.7.7.41</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18">CDP-diacylglycerol synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">TAMM41</name>
        <name evidence="19" type="ORF">MHBO_000663</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Lipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Phospholipid metabolism; CDP-diacylglycerol biosynthesis; CDP-diacylglycerol from sn-glycerol 3-phosphate: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TAM41 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="19">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.41" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000117">
        <property type="protein sequence ID" value="MES1918748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120518">
        <property type="term" value="F:protein N-terminal-methionine acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015222">
        <property type="entry name" value="Tam41"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13619">
        <property type="entry name" value="PHOSPHATIDATE CYTIDYLYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13619:SF0">
        <property type="entry name" value="PHOSPHATIDATE CYTIDYLYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09139">
        <property type="entry name" value="Tam41_Mmp37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="19" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="11" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="10 19" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="16" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="17" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 19" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00029893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="MES1918748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23919" checksum="FF3FAACF1E818D53" modified="2025-10-08" version="1">MSTRNFLKEVLKNFPKTDFAFAYGSAIFPQRTETKKSSKMVDVIFSVDNPSQWHAENSKVNPFHYNFSRKFFLSTFESWKPGVQFFPFASLSKIDSTKYSFVTNEIKYGVIPTNLLISDLLQWDDMYISGRMQKPIVSFNKNKLVFSENCAQIDKAQKVNLENAFTLALFMLPDRFKLIDLFKEITKLSYKGYNLFSDFKNLFSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN4</accession>
    <name>A0ABV2AGN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000503</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000081">
        <property type="protein sequence ID" value="MES1918548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15897" checksum="BD4345276DB9C22A" modified="2025-10-08" version="1">MFLCLDASKLIIYVFDASNLNLLRTASMLQTDMLQNIKKRDIRDEMKRVIKQFNEKINNISMLECCDFEEKEFKGVVSETKSIADKYGFTVENMSLPTSEKYILVYYNNGDIKKFVVIGGKRKIKIRKFLHKFFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT0</accession>
    <name>A0ABV2AGT0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA endonuclease activator Ctp1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000764</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000144">
        <property type="protein sequence ID" value="MES1918868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="11"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="175" mass="20505" checksum="DD2D6C941FBB358D" modified="2025-10-08" version="1">MAVINNKNLSCKNCKNFLEKLQNENRTLEQSLSSYIKENKLLKEKLSVLNKKIQKQIKTDILFKNNQTTQKVNKNEQKFQKISKNEQKSQKINKNEQNMKKVVLKDKTNILSVPETIRGHKRKELKGHCCKQCKNFYDSKITGANIVKSVDELSRHRVNNKIPSTPPWYWDLSSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT3</accession>
    <name>A0ABV2AGT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Thioredoxin-like 4A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">TXNL4A</name>
        <name evidence="7" type="ORF">MHBO_000775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the DIM1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000147">
        <property type="protein sequence ID" value="MES1918880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02954">
        <property type="entry name" value="DIM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004123">
        <property type="entry name" value="Dim1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12052:SF5">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN 4A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12052">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEN 4A, 4B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02966">
        <property type="entry name" value="DIM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017199">
        <property type="entry name" value="mRNA_splic_U5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01410">
        <property type="entry name" value="DIM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="4 6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR017199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16577" checksum="7A549BDBFA0E69A7" modified="2025-10-08" version="1">MSFTLQHLNNGWEVDQAIVSEDDRLVVIRFGRDYDKSCMLVDRALEKIVEKVSNYAAIYLCDIEKTPDFNTMYELFDPCTVMFFFRNKHVMIDLGTGNNNKINWALNNPQELIDIIEVTYRGARKGRALIISPKDYSTKHKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH29</accession>
    <name>A0ABV2AH29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000876</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000174">
        <property type="protein sequence ID" value="MES1918995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF702">
        <property type="entry name" value="AMINO ACID TRANSPORTER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="77"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="166"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="192"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="357"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="390"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="7">
        <location>
            <begin position="52"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="25"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="486" mass="55211" checksum="095E3922D824D73B" modified="2025-10-08" version="1" fragment="single">QIFMDTNARYKNGSSQADNSEEDSNPSLEENSKSDNLSNPTRMQYFLNILNCYANYVNSLIGAGIVALPITLKLGGIPFSVAASIFCCVLIYFTSDILVRTSEYLEKKKKGDPQSYAEVAILTIGPWSQYIITILIFLMMFFAMSIYLIILRRSTKSLIEDFTNKVFIYDKLVLLAIVVPVFLLCIPRDITILGYTSMLSSALVVTFLVIIIVKSPEYNKLMNDLTPNKMMQNELKLNIERMQWLCEKVTDGKSIYSDENDKRFRIHRATNIAIMYNTMRSAFDDCTNVDVNKLLPRLANIAVPPVVEHPTVPLIYPVPRTFVEVVGQAHAQSLFVLYSLIGAVPYKSTLFDKLGVLGIYFSAFIIQQAQYSIINAMLKRNLKNWRIVQTLGMPTVYILCMAVAFSGYYGQRDLIGETVFDKMRLRYFVNTGEVDYGFIKNSSCKCGSDCTVRHHNADFSDDAFLRKTKHSYNDNDSDIEKNKKEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH77</accession>
    <name>A0ABV2AH77_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000745</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000139">
        <property type="protein sequence ID" value="MES1918849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF458">
        <property type="entry name" value="SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="102"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="179"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="263"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="301"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="9">
        <location>
            <begin position="2"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="335" mass="38204" checksum="299FD3EF23D191E9" modified="2025-10-08" version="1">MCDYVSVQLVKMAKIKNVDNYEKLSEAAFNRHFFYLTNIFCFLSAFGAMMGYCQLVNDSMKEFLKNFISENSQIEKYAVYTTIGMIILFVAPFAFLRNLSSLSLVSILNLVTFSIVAVVVIATGIRISDGNFDKNKKDFEFNGFISAFGTLSYAFVCHDNTFPVFAGLKNGTQKRWDKVVHITVLSLTLIYWIFPSFCYFFIPEINDYILNSQSISDLLEIKISQILLAITILLTYLTKVHVTRIYITNLLKRFGKNIENLPRRWFLLVHCGITTMFYKILLRFRIMILSTMLGIVTGNLMFIVALTGLVTSTAIGFVFPVLIIIKVSIVKCLTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHA0</accession>
    <name>A0ABV2AHA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal RNA-processing protein 14/surfeit locus protein 6 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000683</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040306">
        <property type="entry name" value="Os02g0753200-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35321">
        <property type="entry name" value="OS02G0753200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35321:SF1">
        <property type="entry name" value="OS02G0753200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="120" mass="14166" checksum="00A91F1721D1EA27" modified="2025-10-08" version="1">MAKKKIKLLPVDKLFDKPLDDFVKVKEREIKVFDLDKKSSEDEKNESSSEDEILKLAKAFKSNKSFLNERTKKIKKPVDKEKIREKTAMKKKERAKRMKGQSSISTWKSEGEMKLRQQFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD5</accession>
    <name>A0ABV2AHD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000789</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000150">
        <property type="protein sequence ID" value="MES1918894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9196" checksum="589F82BD31FCB8AF" modified="2025-10-08" version="1">MELEIVSDHALSVKPILYGINDEKKVLDVKISVIEEEGVDLVKVLNEMLLSGEFLPYQTLQKIVDSFLNEQSVMYTTNIKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHE1</accession>
    <name>A0ABV2AHE1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">pyridoxal 5'-phosphate synthase (glutamine hydrolyzing)</fullName>
            <ecNumber evidence="3">4.3.3.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">SNZ1</name>
        <name evidence="10" type="ORF">MHBO_000958</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>aldehydo-D-ribose 5-phosphate + D-glyceraldehyde 3-phosphate + L-glutamine = pyridoxal 5'-phosphate + L-glutamate + phosphate + 3 H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:31507"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58273"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
            <dbReference type="EC" id="4.3.3.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; pyridoxal 5'-phosphate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the PdxS/SNZ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.6" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000196">
        <property type="protein sequence ID" value="MES1919091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036381">
        <property type="term" value="F:pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001852">
        <property type="entry name" value="PdxS/SNZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033755">
        <property type="entry name" value="PdxS/SNZ_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003215">
        <property type="entry name" value="PRK04180.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31829">
        <property type="entry name" value="PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31829:SF0">
        <property type="entry name" value="PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01680">
        <property type="entry name" value="SOR_SNZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029271">
        <property type="entry name" value="Pdx1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="Ribulose-phoshate binding barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01235">
        <property type="entry name" value="PDXS_SNZ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51129">
        <property type="entry name" value="PDXS_SNZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0704">Schiff base</keyword>
    <feature type="domain" description="PdxS/SNZ N-terminal" evidence="9">
        <location>
            <begin position="11"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="298" mass="32247" checksum="E6787F6808AB0322" modified="2025-10-08" version="1">MSSKTEQNEIDLKDGMAKMLVGGVIMDVVNAEQAKIAEDAGACSVMALERVPSDIRKDGGVARMTNPKLIQEIIEAVQIPVMAKCRIGHFVEAQILQTMRVYFIDESEVLTIADEEAHIEKKSFKKPFVCGCRNLGEALRRIEEGAAMIRTKGEAGTGNVVEAVRHTKAVFEQIKKLKTMSSNEMEKYAKEIRVSTALVQKTRDLGRLPVVTFAAGGIATPADAALLMQLGVDGVFVGSGIFKSESPKDTAGAIVAAVKDYKDPEVIRKVSEGLAGAMPGLTINDNLLGGYYSKREKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHE4</accession>
    <name>A0ABV2AHE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chromodomain helicase DNA binding protein</fullName>
            <ecNumber evidence="8">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">CHD8_1</name>
        <name evidence="8" type="ORF">MHBO_000966</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000199">
        <property type="protein sequence ID" value="MES1919099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023780">
        <property type="entry name" value="Chromo_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623">
        <property type="entry name" value="CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00385">
        <property type="entry name" value="Chromo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chromo" evidence="7">
        <location>
            <begin position="300"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="SNF2 N-terminal" evidence="6">
        <location>
            <begin position="446"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="404"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="19"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="38"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="57"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="511" mass="59114" checksum="2E6316D323AFE57E" modified="2025-10-08" version="1">MRRSARLDTKKKTPLDFLSSESPNSDSQGSSFINDFASKQPSESSYQNSSEKESENENPSAPASDSESYSFSSESETENRKPKKTKKAPVVEDTSDLFDPPFPKTLSKIIMRSDLEDSKNMFLVKFKNLSYHRCDWMSKMDIEFDKIGKLRLNKFIRESHAAPDPIELERKFSARFLFDPFFLQVERIIRHRINVEEFDADDENFVIDGKDQIGPINENFVIDGKDQIGPIDENLVIDGKDQIGPIDENRSEHDLLFRVKIPSGVNGRSQTDFVNKLKTRDGLPGCLKRYFETAVFRKTKKYLVFVEYLVKWRSLPMTECTWEDFSEVGTEIGANDVQQNSQNSAQSCAENGGKYLITKYAKRKAIEQYLDPTKLKKSLKMAAKRYEKSSDLKRKLKRIGLKTLPTSWHDPKSPRNARPPTLKGGTPFSEWQPPEYKNGNELKRPYQEHGVRWLIKNWHKKVNCILADEMGLGKTIQSIAFTEYLLREFQNFKFTFLKLQKILILKIENFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI02</accession>
    <name>A0ABV2AI02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000936</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000189">
        <property type="protein sequence ID" value="MES1919064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="35545" checksum="4B90250A387987C0" modified="2025-10-08" version="1">MDNSNTYKDRLKLKKSTKTAVLGKVNDILRNRSLQTRIFRIQKSCISPVEIVLDFNVILTHCFRTSPLEEHTGFGRFIDIANAFTRSKMGFYIRTGYIHFMGEKYKFLNNQNCEEKCTLKGFLKEVRDNYILPKGWEGITTGFFTTCAGEYKYLAEKGIFSTSTTETIQIVYGSSKNTAKAIAASFARGFGANNVEDETLEFLMNKKHDEFRQVVIANQTVQTVCASEIEIYKRNPKVKFLKITGERDFDPEKIADHKTAWIVGSILFVCLLVFMIFAAFFVKAKYFNSRNKDDDTISMEELYPDEITY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI67</accession>
    <name>A0ABV2AI67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001157</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000251">
        <property type="protein sequence ID" value="MES1919302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="11048" checksum="4EA62EA6106FF895" modified="2025-10-08" version="1">MEEELDLCARRSDRTNKHEPFYLENLYYNKSKSLEFVPARTKDNFSVLDLERALIYEQKYGDGSGTDFLKVLKGGFLWRIKTFFKNILRIVNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP9</accession>
    <name>A0ABV2AIP9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glutamine--fructose-6-phosphate transaminase (isomerizing)</fullName>
            <ecNumber evidence="2">2.6.1.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001365</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:13237"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58725"/>
            <dbReference type="ChEBI" id="CHEBI:61527"/>
            <dbReference type="EC" id="2.6.1.16"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.16" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000325">
        <property type="protein sequence ID" value="MES1919555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10937">
        <property type="entry name" value="GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10937:SF0">
        <property type="entry name" value="GLUTAMINE--FRUCTOSE-6-PHOSPHATE TRANSAMINASE (ISOMERIZING)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13522">
        <property type="entry name" value="GATase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="6">
        <location>
            <begin position="34"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="237" mass="26040" checksum="1C666120E22771F8" modified="2025-10-08" version="1">MPRILNIIASINRRFSTTKSIPKSKFATKFAIGCGIVGFVGNEPAQDYIFEGLHILRSRGYDSAGITTISENPKTCSNPKQSLDQSSNGFNKKTANHSLKTTKFASINVSDSFDLVKKAAQSIHSKNFCGIGHTRWATHGGKTDINAHPHTDQHNRIAVVHNGTIENFAVLKKELQSENYRFVSDTDTEVIAQLISFFYDSEQKNLVAAVRIAASKLQGTYGLAILCRDLPGRIIAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ8</accession>
    <name>A0ABV2AIQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">ADP/ATP translocase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">ADP,ATP carrier protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">MHBO_001375</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">ADP:ATP antiporter that mediates import of ADP into the mitochondrial matrix for ATP synthesis, and export of ATP out to fuel the cell. Cycles between the cytoplasmic-open state (c-state) and the matrix-open state (m-state): operates by the alternating access mechanism with a single substrate-binding site intermittently exposed to either the cytosolic (c-state) or matrix (m-state) side of the inner mitochondrial membrane.</text>
    </comment>
    <comment type="function">
        <text evidence="16">Catalyzes the exchange of ADP and ATP across the membrane.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>ADP(in) + ATP(out) = ADP(out) + ATP(in)</text>
            <dbReference type="Rhea" id="RHEA:34999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="12">
            <dbReference type="Rhea" id="RHEA:35000"/>
        </physiologicalReaction>
    </comment>
    <comment type="subunit">
        <text evidence="3 16">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="16">Membrane</location>
            <topology evidence="16">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000328">
        <property type="protein sequence ID" value="MES1919566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002113">
        <property type="entry name" value="ADT_euk_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002067">
        <property type="entry name" value="MCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45635">
        <property type="entry name" value="ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45635:SF14">
        <property type="entry name" value="ADP_ATP TRANSLOCASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00927">
        <property type="entry name" value="ADPTRNSLCASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00926">
        <property type="entry name" value="MITOCARRIER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0050">Antiport</keyword>
    <keyword evidence="11 14 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="8" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 14 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 15" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="126"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="183"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="221"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="14">
        <location>
            <begin position="16"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="14">
        <location>
            <begin position="120"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="14">
        <location>
            <begin position="218"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00024143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00045250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU368008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="MES1919566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="313" mass="34708" checksum="16E1050D5E16B8D9" modified="2025-10-08" version="1">MSAKPAPESSKKEVKLSMAENFCLSGAAAIISKTIAAPIERVKLMVQNQGEMLKNNIISKPYKNSFDCFRRTFQSEGLVSFWRGNSANVIRYFPTQALNFAFKDKIKLLLKSAKDDNYYVKFSKNILSGGLAGSISLCFVYSLDYARTRLANDAKSSKKGGARQFNGLFDVYRKTMASDGIVGLYRGFAISITGIMIYRGFYFGLYDTLKPMLLGDNSNLLFNFLLGYVVTMTAGLLSYPVDTIRRRMMMTSGTGVNYSSSIDCARKIWRNEGATAFMKGATANILRGVAGAAVLALFDEFKKCYVDAKSRML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ9</accession>
    <name>A0ABV2AIQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000321">
        <property type="protein sequence ID" value="MES1919543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="24903" checksum="CAF10846706D5A56" modified="2025-10-08" version="1">MEENIAKGLEQLKRFKQMTPFTKSKIAFVIKSDLETEPKKDYFREENSLLQKINSSINFKNLTVHELEDIFENAKIRNFQNFGFVYKSFYFAHPPPPTDNNLVCPTNAKNTKNKKTKNIDSKNNNNAKKDSKNIKNAKNLESKNNNCNTKETKKNIIAILNNKNKEVIDLCSEDGDKDNHSTSINILMSENSEERKKSVITSLLNEILSEIVNRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV7</accession>
    <name>A0ABV2AIV7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ubiquitinyl hydrolase 1</fullName>
            <ecNumber evidence="2">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">UBP6</name>
        <name evidence="8" type="ORF">MHBO_001257</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000283">
        <property type="protein sequence ID" value="MES1919419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044635">
        <property type="entry name" value="UBP14-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43982">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43982:SF6">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="USP" evidence="7">
        <location>
            <begin position="98"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="413" mass="46985" checksum="6B57CF8EA0D0CDBA" modified="2025-10-08" version="1">MTDLTLKFGPETHKLVLDKQKSLADFKNSIYALTSVPVNKQTLVSSGKKIKTEEDLKALKNGQKILLIGSAKTLKQPVKRIKFVEDETKTDHLEGAAKGLINISNTCYMNSVLQLIFSITEIKDAVILYSKQSEKSDKANLLLVEMGKVFAKMENSPTVVKPKEFWIMLLNTFPQLRAQENNGVFKQQDAEECFGLIVNTIREELGKLAPSTFDGKMESITKCVTDESENTTKTETDFSLIKCHINAKTDHLFKGISDGLSENLIKRGENSTEDLSWIKTNKIDRLPDCLIVHFVRFYWKREIQRKAKIMKLVSFPVDSDLEMTSFCTEALKKKISEEKETGRYRLESLITHQGPYSESGHYVAWTKKDESNWFLYNDDSVEVVPVSEIKKLFGGGEWHSAYLAVFKKIKVDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX3</accession>
    <name>A0ABV2AIX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001434</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000349">
        <property type="protein sequence ID" value="MES1919638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045151">
        <property type="entry name" value="DCAF8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15574:SF40">
        <property type="entry name" value="WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15574">
        <property type="entry name" value="WD REPEAT DOMAIN-CONTAINING FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="30"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="81"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="29514" checksum="6C2356B6A10DC602" modified="2025-10-08" version="1" fragment="single">METPDNKSSFSHLIEQPKFFLPRMTNVFNIYGHNGCVNCIKWSHDGSLLISGSDDGTLKIWDMTKNSLKSNGHSTNCKNTLNGHISNVFSVEMQPAKPLSAAKIISGGNDSTLRIFDLKTGTNLHILRQFQKKICSISAPKTCFNTFIASSADGTVRHYDMREKFERCNENIGENKSNRILPQIFGGGFAQENQFKSIKNLLLDFSTDERNRYGVHSVDIHPLNASIFVVSIANGNSYLYDMRKISNTPLKSFINSYRNYQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX7</accession>
    <name>A0ABV2AIX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000344">
        <property type="protein sequence ID" value="MES1919622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="14342" checksum="D0789E924B81E20E" modified="2025-10-08" version="1">MDNNNFSSKEIQNSLNEDLSKESTQADISKVLPMILSGVYKSSEEQFNKLGQQTTVNAYGLASISKQMTQLSQIVKQLADKAGIQGQVEQPEASAPVRPKQPAQPKQDGNEKLAEMFAELMQNRNGNDQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ69</accession>
    <name>A0ABV2AJ69_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">4a-hydroxytetrahydrobiopterin dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.96</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">4-alpha-hydroxy-tetrahydropterin dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001494</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(4aS,6R)-4a-hydroxy-L-erythro-5,6,7,8-tetrahydrobiopterin = (6R)-L-erythro-6,7-dihydrobiopterin + H2O</text>
            <dbReference type="Rhea" id="RHEA:11920"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15642"/>
            <dbReference type="ChEBI" id="CHEBI:43120"/>
            <dbReference type="EC" id="4.2.1.96"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the pterin-4-alpha-carbinolamine dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.96" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000376">
        <property type="protein sequence ID" value="MES1919712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.20">
        <property type="entry name" value="Transcriptional coactivator/pterin dehydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036428">
        <property type="entry name" value="PCD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001533">
        <property type="entry name" value="Pterin_deHydtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12599">
        <property type="entry name" value="PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12599:SF0">
        <property type="entry name" value="PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01329">
        <property type="entry name" value="Pterin_4a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55248">
        <property type="entry name" value="PCD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12553" checksum="43F6C44567D36B8E" modified="2025-10-08" version="1">MSSPIKVISKTKLPGWRMVFSLKSFYNKKGKDGRSITKLFKFVNFKHSLFFMTQAGYESEGLNHHPEWSNVYNKVNVRLTTHSAKNLTIKDFELAEKMDQIEKLIKAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK7</accession>
    <name>A0ABV2AJK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protein phosphatase PP2A regulatory subunit B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PAB1_1</name>
        <name evidence="5" type="ORF">MHBO_001599</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000417">
        <property type="protein sequence ID" value="MES1919843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="29"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="121"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="228"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="396" mass="45324" checksum="FF7E9DDE8F932A38" modified="2025-10-08" version="1">MKKLNFSEFEDKEMKISISMKKAVFSPKHNLKIKNVDVDIDNRTFFELFSVFGFVLSSKLATDPEGNSNGYGYVNYNNSEKAEWVVKVCNNQKLLSSRLNVTFVTTIRKSFQTSTENKEFTNIFVKNIKKTATKKQLLNEFNRFGQIDSVKIPDNPDGTLKGFALLNYHSHQSAKTAIDNWTDYASSKNSSLGELYVNRALSKDAREKSIKENFMLKKEILDVETTGRNVIFKNLSLAVTKKFIGERLSRYGRIESIELKENNFDERMAEKQQKKCAFVLFASREDAVKAIKSENNKDWKGSQIVATLWMRKDTFDDLKSFGGFVDEEQAFKNSSVAKKFSLNQTVLASSVLGSKCKVQLQNIINDDGLNRKIDSSLKVSREQVYIIDRKLLLKKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT9</accession>
    <name>A0ABV2AJT9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta transducin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DIP2_2</name>
        <name evidence="2" type="ORF">MHBO_001695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000458">
        <property type="protein sequence ID" value="MES1919953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="3"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="261" mass="29873" checksum="60DFEF41831E6611" modified="2025-10-08" version="1">MVLRGHCGEINGMAVSKDFFVSVSNDNSIRIWTESDEMLFLEEEKEAELNRLFQISEKRDIENETKPSAVKGSGLSIEAQSDIPKKQSKSQIIEEIYCLFAKNSNLGESDFAKKENLVKGDENLFAENNVDSKTCDEFLAILTKFSFSDFENALYQLFYYQACSALKCIDFLINDDLIYFDRLLRTALLLSKLHEKQITTDQKMINLMKSIKSKSCAKARKWRNLVSFNCVCLSMARKAKKKSLESDRNLTKTEDSIISLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK58</accession>
    <name>A0ABV2AK58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DNA-(apurinic or apyrimidinic site) endonuclease</fullName>
            <ecNumber evidence="9">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_001783</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="9">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="9">Probably binds two magnesium or manganese ions per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the DNA repair enzymes AP/ExoA family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000497">
        <property type="protein sequence ID" value="MES1920059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09087">
        <property type="entry name" value="Ape1-like_AP-endo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10027">
        <property type="entry name" value="UDG-F1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="entry name" value="Uracil-DNA glycosylase-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004808">
        <property type="entry name" value="AP_endonuc_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002043">
        <property type="entry name" value="UDG_fam1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018085">
        <property type="entry name" value="Ura-DNA_Glyclase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00195">
        <property type="entry name" value="exoDNase_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00633">
        <property type="entry name" value="xth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22748">
        <property type="entry name" value="AP ENDONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22748:SF6">
        <property type="entry name" value="DNA-(APURINIC OR APYRIMIDINIC SITE) ENDONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="Uracil-DNA glycosylase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51435">
        <property type="entry name" value="AP_NUCLEASE_F1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00130">
        <property type="entry name" value="U_DNA_GLYCOSYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 9" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endonuclease/exonuclease/phosphatase" evidence="12">
        <location>
            <begin position="26"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="Uracil-DNA glycosylase-like" evidence="11">
        <location>
            <begin position="407"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="317"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU362131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1920059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="492" mass="57155" checksum="FFCE4FA899E5316B" modified="2025-10-08" version="1">MIKATFNFSKISQMINIEKNTLVKICSWNVAGLRACVKKGHFLPYFKKEDPDILCLSETKCTLDQIPFEIDKKYKIFWNDCSHKAGYAGVGILSKYEPVKVVEESFGDIGDGRILTLEFEKFYLVNTYVPNAGEKLKFMERKRNWNELMRNFLLKLNKEKPFIWTGDLNVAYLDYDVYDGETNKNRSKSAGFTDYEREDFTKYFQEQNFVDIYRKFYPEEREKAMTFWSYLGNNRVKNRGWRLDYFIVPPSLSDAPKSVRVASDVFGSDHVPIVMEIDLPGNFEKTANFDKVPKKGKRKAKQQLLPFATKQKNKSNKNLQNESNKNLQNESKNLQNESKNLQNKSKNLQNESNKNLQNLVDNDWQNFFKNEFQQKYFKDLEIKIFGSSKNSVIYPPLKSVYSAFELTPLNNLKVVIIGQDPYHEENQAHGLSFSVQKGVSLPPSLKNIFKEAVDDVNAKINWEDGSLEKWAKEGVLLLNSVLTVEVLKFKMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC8</accession>
    <name>A0ABV2AKC8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001847</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000526">
        <property type="protein sequence ID" value="MES1920133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00121">
        <property type="entry name" value="MATH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.210.10">
        <property type="entry name" value="Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002083">
        <property type="entry name" value="MATH/TRAF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008974">
        <property type="entry name" value="TRAF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24413">
        <property type="entry name" value="SPECKLE-TYPE POZ PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00651">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22486">
        <property type="entry name" value="MATH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50144">
        <property type="entry name" value="MATH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="MATH" evidence="3">
        <location>
            <begin position="9"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="BTB" evidence="2">
        <location>
            <begin position="162"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="459" mass="52659" checksum="9603C60AD9547FDF" modified="2025-10-08" version="1">MSENNVKNKLNYIWKISNFREVSTAFKIDSPIICSKGVMWQLRMYPRYKSDQFSQHTYVSIYIFCLGPFFPLAGWMLQIVDSLAHGGGLRGARRQFQFKSNASRGYRKFCRTSKLMSPRENYLNADGEICIKLSLDWESPRFAGKSSSDLLKKQLSENENLLDFSLKGPKWKIKVHKAVISGLSPLFERMFLSSYKENLANEAFFSDIDEKTIKGIVEFAYGGNALKLLKESVSSKIHKALKPVGCSDFSEKVQVVKRKRAEGDKSKICSGAPVLIEKSANYPFIKESLFRGNNETTISDINDFIGNNKNGPKSLNKIVFDEYFDAILKLFVASDRYLIDDLKRICENKIREMLSIENAVKTVKICLFVVPKIDFAQIINKNDDKSALDENNVKNEVFGMASKNLLFFVVEFIALNLERFFERNDFKRFIKKHSDFVSNVFLLAKRMDKMRTGKVSEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKM1</accession>
    <name>A0ABV2AKM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001874</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000537">
        <property type="protein sequence ID" value="MES1920172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15658" checksum="A4E7F99D2BF3034A" modified="2025-10-08" version="1">MTWGAFGYKRGAFVIVKERMNSEMYMKMIKRIFCHLEITLLIITGFTNRIMTLYINPNKLCHFLLNTKWNFWNGLHYLWAAIPSKIFGDTWPDIFIQTDANMTQLRNLLMRSKTHGKIFNYTIKKNDRRNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL34</accession>
    <name>A0ABV2AL34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002071</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000647">
        <property type="protein sequence ID" value="MES1920396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="411" mass="47526" checksum="F6A478D70DE63308" modified="2025-10-08" version="1">MKNVLPFEILVKISTYLENNDNFDHIFNLKIGKNKLKIENKNLTVKKWNLVAEDICRIYADLKSINLNNCNIHNYALTKILGKFQHSLQYFNASHCNSLVSDAQFVSKLNSISNIFIIDCPKLDSSSHSDFFDTFIECNKMVKSKSCLRKSEYFLVDNSCSLKINQFKEIDGCSKSFEAKLLSINCLIPEKEIKFPAENRFLENEDEQLIFVGSLFLQKHKNVLTKKAALSPNKMFVSMVDPETTFVGKNSDCLNILNPLDLCTFWSKYGRGKSKNDETNSINLVKRENKIFFVERKKSSCDKIDVFLEFVANVSINGMRPLFWYLKNGQENFNLNHLKILILMGTHLNCINEKEENVIVETAKKLEKIDFVEYILHFGGIVSDKTKSELLFIDENSNFSRLKNSFYKCFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL37</accession>
    <name>A0ABV2AL37_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Metalloenzyme domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000642">
        <property type="protein sequence ID" value="MES1920388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="entry name" value="Alkaline Phosphatase, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006124">
        <property type="entry name" value="Metalloenzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005995">
        <property type="entry name" value="Pgm_bpd_ind"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31637">
        <property type="entry name" value="2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31637:SF0">
        <property type="entry name" value="2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01676">
        <property type="entry name" value="Metalloenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="Alkaline phosphatase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metalloenzyme" evidence="1">
        <location>
            <begin position="7"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10196" checksum="189E3CC0CDA87996" modified="2025-10-08" version="1">MAKKNQKTFLLSIDGWGISAEKRGNAILEANTPIMDSLTANKKQYCDLGASGLDVGLPEGVMGNSEVGHLTMGFSLFLLENGAMETFIFIKLVVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL90</accession>
    <name>A0ABV2AL90_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">YjeF C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002100</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000667">
        <property type="protein sequence ID" value="MES1920432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01171">
        <property type="entry name" value="YXKO-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000631">
        <property type="entry name" value="CARKD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12592:SF0">
        <property type="entry name" value="ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12592">
        <property type="entry name" value="ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01256">
        <property type="entry name" value="Carb_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="Ribokinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51383">
        <property type="entry name" value="YJEF_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0521">NADP</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YjeF C-terminal" evidence="6">
        <location>
            <begin position="1"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16213" checksum="9B36ECDE232EFDC9" modified="2025-10-08" version="1">MRRVKDCVRTHSVLDHKGCSGRVTIIGGSPVYTGAPYFAGMAALRMGADLVKIICHGDAAIPIKSYSPELMVEPILSEHAKKEDFHDSLKNQHCVVVGPGLGRNQNIQKLCCQLIRHCCDDLKIPVVVDGVFIDIEKGRDISSRRFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL99</accession>
    <name>A0ABV2AL99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein uL2 RNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001949</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000574">
        <property type="protein sequence ID" value="MES1920259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002171">
        <property type="entry name" value="Ribosomal_uL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022666">
        <property type="entry name" value="Ribosomal_uL2_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691:SF5">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691">
        <property type="entry name" value="RIBOSOMAL PROTEIN L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00181">
        <property type="entry name" value="Ribosomal_L2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01383">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL2 RNA-binding" evidence="4">
        <location>
            <begin position="70"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17217" checksum="645E3ECBEE523EBC" modified="2025-10-08" version="1" fragment="single">MFSLFRKRLNFNSLRFFSNRSRDASLIIPGTIKLKPKTPGTRHARLPDKSNLFDGPPIEELTTPLKRTGGRNNHGRITVRGRGGGEKRVYRFIDFKRNIYDTDAKVVRLEFDPNRSSHIALLKYPDGKVNDILAPENVKPGDVIISSRQND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR7</accession>
    <name>A0ABV2ALR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002257</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000758">
        <property type="protein sequence ID" value="MES1920605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045335288" evidence="1">
        <location>
            <begin position="17"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="270" mass="31791" checksum="43560342FD8C418E" modified="2025-10-08" version="1">MAFSLTNFGLISLAFSLLNNFEQNLFPLFSVLTKKCLSIQNSSFLSYENNSVLSIEERLILQFDIGTEFSRCSWLLLESLLAKYDRDDQKYAKFILQILLSKHNKNSFNHRENFDKNGENNKKQNFGKNGLKISRIFGKIKFVPKFLEQMLLNLKGKKGKSFSEVYCFSYGSNAIFFLRVLVEEGYLSQAAEMAIRYCRNERLRYLKENKEIWYPRNLLKRLRNSMSEFIQQHLKKRKPANFWLIRNLFVNLKTEIALCDSLDNALFDDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR8</accession>
    <name>A0ABV2ALR8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DOCKER domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002027</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DOCK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000623">
        <property type="protein sequence ID" value="MES1920348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.740">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026791">
        <property type="entry name" value="DOCK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043162">
        <property type="entry name" value="DOCK_C_lobe_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027357">
        <property type="entry name" value="DOCKER_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046773">
        <property type="entry name" value="DOCKER_Lobe_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23317">
        <property type="entry name" value="DEDICATOR OF CYTOKINESIS DOCK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23317:SF76">
        <property type="entry name" value="LD20667P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20421">
        <property type="entry name" value="DHR-2_Lobe_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51651">
        <property type="entry name" value="DOCKER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DOCKER" evidence="2">
        <location>
            <begin position="1"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="266" mass="31353" checksum="6D77983A397CA4F4" modified="2025-10-08" version="1" fragment="single">EHNEAHKHFGTYFLVTFLGKPFGDMNGEKFVYRRKGNTLLGDFCEEMKKKYESTLETNVNFVENEDKELNDNQAFLSVNHLKPISNFRDKNKFERSTYKNTFKYEVRLKNEEKMVYKVKVEHPFPTIVTRQKVLAISNETYSAVKVAHDDVQSRIDELNLVVSAKPLNISSLENLLVGTLLAQVNGGIKIYFENFYKTEKEDNLDKNELKQFEDALLQLVSVVDRSIKKYYMEINEKKLNEQKQDMYETLCEYYCKMEKLVWEKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY6</accession>
    <name>A0ABV2ALY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DNA repair protein RAD51 homolog 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">RAD51C</name>
        <name evidence="10" type="ORF">MHBO_002012</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000613">
        <property type="protein sequence ID" value="MES1920332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052093">
        <property type="entry name" value="HR_Repair_Mediator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013632">
        <property type="entry name" value="Rad51_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46239:SF1">
        <property type="entry name" value="DNA REPAIR PROTEIN RAD51 HOMOLOG 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46239">
        <property type="entry name" value="DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08423">
        <property type="entry name" value="Rad51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="RecA family profile 1" evidence="9">
        <location>
            <begin position="6"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00040674"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="27721" checksum="9CC868C18C73370A" modified="2025-10-08" version="1">MKACSQSIKIPSGLSPPLSHFETGKIYEIFGRPGIGKTQLCLQLCLNLQRFSHDSPTAFYFDTEGGFSMERVIEMATSLAPSDSFSEPIEISNIRIFRTFGLLDFMRNFKDVENYIDENSNVKLIVIDSLSFPIRCFGGTMTERNRLIKPFLQKLVLVAIKFALVIVVVNHVTTRRKNDNTFRIESKMGLNNNKTEEEFESIADTRIKMNWVGNKRMATNVKSGEAKPFRIDGNGVFPEIKTIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ5</accession>
    <name>A0ABV2ALZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005306</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000683">
        <property type="protein sequence ID" value="MES1920459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18795" checksum="2400CC74DF9806C5" modified="2025-10-08" version="1">MALEISDIENEKVIIKNVVATQSNPSFNEIIDSLSYIKGKVYTVKQLQKIIEAPLNDLDQTGICNKINPKLGLYNKTKEKYDGNEPIPVELIFDIEKILSYTGKFNTDINTXXXXVFDYETNFHKKGIAIFSPKLFSSWRKNIFRYRKKLNRFKRIQFVDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM56</accession>
    <name>A0ABV2AM56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000819">
        <property type="protein sequence ID" value="MES1920712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7297" checksum="5AABCE29BC96FE2B" modified="2025-10-08" version="1">MEIIAENHLMKDNADEFGISQSGAPCGSDGIPLIYLPGSDTKRVIHEKYVEILLRFQLQSPKGIVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM68</accession>
    <name>A0ABV2AM68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002388</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000842">
        <property type="protein sequence ID" value="MES1920748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.60.10">
        <property type="entry name" value="Zinc finger, CCHC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050441">
        <property type="entry name" value="RBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48034">
        <property type="entry name" value="TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00098">
        <property type="entry name" value="zf-CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00343">
        <property type="entry name" value="ZnF_C2HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="Retrovirus zinc finger-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="5"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="domain" description="CCHC-type" evidence="5">
        <location>
            <begin position="147"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="58"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="75"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="88"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19348" checksum="D47289A4BC8FA3BF" modified="2025-10-08" version="1" fragment="single">MPSKTRLHIGKLTEKTEGQELEKELEKYGEVVDFELYSDYAYVDYKTQKEAQEAIDGLNGKKYDGNTLEVEFDSGSKSQSNSASKSGSRGRSRSRSQNRGRSRSRSQNRGRSRSRSRRRSRRSPSYRRRSPPYRGRNGFRGSKFGTKCFNCGVEGHFARDCTETNWTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM71</accession>
    <name>A0ABV2AM71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002367</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000827">
        <property type="protein sequence ID" value="MES1920727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23097" checksum="F177975A4B65ED4F" modified="2025-10-08" version="1" fragment="single">MLKSRNKKAFIFHYIPASHFRLAKIISRRFSGKTDSQSQNSPAQKLPANSPYPYLVTAIKVGTPLLPGTIKLGNKDIQQNSDSAKEYAYFLAKREGDKSKVKSLDEIHTVGTYATVSNFPGLNLDQHNQISLGENLIKKISVRKTVKALHVERGKVFLGSYGDEEIYTLPARMMSVIIRKKFLALRRELFIINETIKRESPDMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD7</accession>
    <name>A0ABV2AMD7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Spt5 KOW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002438</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000872">
        <property type="protein sequence ID" value="MES1920802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06081">
        <property type="entry name" value="KOW_Spt5_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="entry name" value="NusG, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041973">
        <property type="entry name" value="KOW_Spt5_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039659">
        <property type="entry name" value="SPT5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11125">
        <property type="entry name" value="SUPPRESSOR OF TY 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11125:SF7">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23042">
        <property type="entry name" value="KOW1_SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Spt5 KOW" evidence="2">
        <location>
            <begin position="46"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21479" checksum="F1CB9F5307F56B65" modified="2025-10-08" version="1">MRRAHVSDAISSVSSLFKRKIGLVPISEMTDTLTTNDKKTETKIYDWVRVKRGLHKGDLALVNDVLEEGLKAEIKLVPRINYSILRRKYAPINQTEQDDSEDIDNDKNVEENKKKKLPIQRKTPPARFFNENEMRRYLGQFADSNDIESLFRQTGGAVIFRGQKFVEGYRHMITSIKNLVIYIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI4</accession>
    <name>A0ABV2AMI4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Aldehyde dehydrogenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002496</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000924">
        <property type="protein sequence ID" value="MES1920878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012394">
        <property type="entry name" value="Aldehyde_DH_NAD(P)"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43570">
        <property type="entry name" value="ALDEHYDE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43570:SF16">
        <property type="entry name" value="ALDEHYDE DEHYDROGENASE TYPE III, ISOFORM Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="ALDH-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="189"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="Aldehyde dehydrogenase" evidence="4">
        <location>
            <begin position="5"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="25046" checksum="360FF5E0E999663D" modified="2025-10-08" version="1">MFTKVEEINTIVDKTRSYFEKGATKKITWRRKQWLGLSHFVKTEETKIKDCLRKDLKQTEILVQAGEIAIIQNSVNLALKKLDDWCYPKIVNDLPLSVFPSKAFIVREPLGVCAILGVWNFPFLTVLEPLVAAIAAGTSVVLKPSEISSHSCNLIFEKLPLYVDSQAISIITGGPEQAVELLKHRFDHIFYTVFKSLCFAIFYFLFSDFSYYICIFFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMP8</accession>
    <name>A0ABV2AMP8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002542</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000967">
        <property type="protein sequence ID" value="MES1920935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008111">
        <property type="entry name" value="RNA-bd_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45894">
        <property type="entry name" value="RNA-BINDING PROTEIN 8A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01738">
        <property type="entry name" value="RNABINDINGM8"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="64"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="29"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17082" checksum="F940280DDEA42CEE" modified="2025-10-08" version="1">MDPDKETRDGPAQEYQALKQKSSLVNKGRGSKKAKHAQKLGDIDQEKFDYDNNNSEYVKSVEGWVVFVSNLHNETEKSDLKKHFEEYGRIIELKLPLSRETGAIRGYALIEFRDFESAKSAVENENGTEINDMPIKVSMAFRGRPLERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT5</accession>
    <name>A0ABV2AMT5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">GOST seven transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002591</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000999">
        <property type="protein sequence ID" value="MES1920985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053937">
        <property type="entry name" value="GOST_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009637">
        <property type="entry name" value="GPR107/GPR108-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21229">
        <property type="entry name" value="LUNG SEVEN TRANSMEMBRANE RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06814">
        <property type="entry name" value="GOST_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0732">Signal</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047025857" description="GOST seven transmembrane domain-containing protein" evidence="8">
        <location>
            <begin position="19"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="250"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="281"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="314"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="357"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="396"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="domain" description="GOST seven transmembrane" evidence="9">
        <location>
            <begin position="175"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="427"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF06814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="450" mass="52302" checksum="6C1E6F71CEB36268" modified="2025-10-08" version="1" fragment="single">MAYISLIFLMATTFVVRADKEFFLNTRYTAYNEVHGMNYHSIYQLDSGPPGFDRPKINYNLTVYTKSYYANKPTYLVIAARARLVENPFIMTWPKSCHTKVLYDDDGIVIKPVLYSPRPDEKNERSGSLTGTLYVETSGDYKAFFLTCSTEIHVKGSVIYENSFGLLGGKKIHYLKVYYYLFIAHMVLLMYWVVNVVTYKKYLRKKHYILTIIIFITVSDIAINVGYLHYINNTGLHNFLFYLVCNSIHALAQTTTRVMICFVCIGYGVRKSKKQKTKKGLIYAFGLIYFTVNVVYYSLTFNKQILDKLLSPSVIISLVVYGMDIFVTGVCFVELIATLEHFEKIPKAEKKEKGIVVGFYSWYLNILFLILCFSLLKNMIEAVLNFMMILYPSMWFLDWILTFGYWQLIHFIILILMILVWLPDRKPQKQTKDSDGKTNKDLKEDSNDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW1</accession>
    <name>A0ABV2AMW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphatidylinositol kinase-related protein kinase tor1</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">TOR1</name>
        <name evidence="2" type="ORF">MHBO_002576</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000989">
        <property type="protein sequence ID" value="MES1920973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050517">
        <property type="entry name" value="DDR_Repair_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009076">
        <property type="entry name" value="FRB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036738">
        <property type="entry name" value="FRB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057564">
        <property type="entry name" value="HEAT_ATR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003151">
        <property type="entry name" value="PIK-rel_kinase_FAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014009">
        <property type="entry name" value="PIK_FAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139">
        <property type="entry name" value="ATAXIA TELANGIECTASIA MUTATED ATM -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139:SF9">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02259">
        <property type="entry name" value="FAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08771">
        <property type="entry name" value="FRB_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23593">
        <property type="entry name" value="HEAT_ATR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01345">
        <property type="entry name" value="Rapamycin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47212">
        <property type="entry name" value="FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51189">
        <property type="entry name" value="FAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FAT" evidence="1">
        <location>
            <begin position="1"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="507" mass="58138" checksum="3A1B2081BBF3F098" modified="2025-10-08" version="1" fragment="single">ELEETINFKKLVQLNLSAKQLNKEKDKLKSVWKKRILGCQRDVDTWQQLLDIHSLTTLPTEETKMYLEFASICRTKGQNSKSFNIINKLLRKNSFDDNDIEAIFSTKGNSSIKYAFIKHLRVNGYPHYSRLYAELASILSSGEKVLKSKCLFHRATENGKSVLEKMESVVREKKSNFRETEFEGNGELTEKESQKLEEILVLFEQATQLNPENQKAFHSLALMHYKTASFFDALKQSKKAEKHCVLAARNFFKSFSLGEKGGRNFGTFQDALRVINLLFGSSQQKEVQEELEKGFKEVSVDIWLNVIPQIIARIMDGNCGEQKLVRDLLIHISETHPQSLMYPVTVATKSEKMSRKSSALFVFSRMKARDPELAEQAMLVSDELIRVAIPWPEICAEKLLEASHDLSEKKFDLFDKKVAKFYKLVIEASPKTSYELKFKQAFAADFEMAFDFIKKAQLGRRADAVERSLAINLKLVQRIQKKLSSTEFQDLADVSPALMKCKNLKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX6</accession>
    <name>A0ABV2AMX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PDK1-type PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002379</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000835">
        <property type="protein sequence ID" value="MES1920738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033931">
        <property type="entry name" value="PDK1-typ_PH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14593">
        <property type="entry name" value="PH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PDK1-type PH" evidence="1">
        <location>
            <begin position="1"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="7100" checksum="CCE1F1E7EB3BD288" modified="2025-10-08" version="1">MKGAIDIMCAFNIEESNNNFFVIRVPGRDYKFKSVDESSRDWVKILNKTIIDTFHKNKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMZ1</accession>
    <name>A0ABV2AMZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002631</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001039">
        <property type="protein sequence ID" value="MES1921030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14186" checksum="69ADFC278EBC9756" modified="2025-10-08" version="1">MIKKTCSAAFRKKFKKALTKSMSLSPLFFKFEIVNSEICSTISTGTGTFSRMTEISKLKQCRPYNLMSLLATASKLSNKKNSGSVLYQRPFFTKLMNILIPPIDTLLSVLFANPFTFYVTKELKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN15</accession>
    <name>A0ABV2AN15_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HIT-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002633</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001040">
        <property type="protein sequence ID" value="MES1921033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23024">
        <property type="entry name" value="zf-HIT_ZNHIT2-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.60.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007529">
        <property type="entry name" value="Znf_HIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039646">
        <property type="entry name" value="ZNHIT2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15555">
        <property type="entry name" value="ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15555:SF0">
        <property type="entry name" value="ZINC FINGER HIT DOMAIN-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51083">
        <property type="entry name" value="ZF_HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="HIT-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="22380" checksum="C24E9A153A4F9433" modified="2025-10-08" version="1">MMEFNRPCRLCWNKESVHACPKCNISYCSLSCYQSHSNDCTEAFYKDNVENQLKSGNSIPEKERQKMAELVQKEINKIVTGEISFKSEENHETDSESDIFDKEMTGKMERMAEEENFDFGEFSEKEQNRFFNAVNSGLLNSSVIEWIPWWKSYFPQLQNGKTDIPKKILVIDHQRNFNFQKLKSLNFPIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN32</accession>
    <name>A0ABV2AN32_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lariat debranching enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DBR1_1</name>
        <name evidence="2" type="ORF">MHBO_002655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001056">
        <property type="protein sequence ID" value="MES1921057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12849:SF0">
        <property type="entry name" value="LARIAT DEBRANCHING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12849">
        <property type="entry name" value="RNA LARIAT DEBRANCHING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calcineurin-like phosphoesterase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22232" checksum="35DFE9466851DA0A" modified="2025-10-08" version="1" fragment="single">MHVAVVGCGHGRLDDIYSSIKQIEKSESVKVDLLLICGDFQAIRNKEELRTMACPEKYRNMESYYKYYNGEKKAPVMTIVIGGNHESSLHFYELYHGGWLADNIYFLGYAGVVNFNGLRICGLSGIFKKHDYSKGFYESPPFLEKSDQHSVYHSREFNVEQLCQLRSKVHIVMTHDWPTGIAFHGDVENLIRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN99</accession>
    <name>A0ABV2AN99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sas10 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002713</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001102">
        <property type="protein sequence ID" value="MES1921132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="71"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="117"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="19462" checksum="4F513802510E22BD" modified="2025-10-08" version="1">MSSYSEYDSETDLENLPMRPKSSRRRTLRTKEDESSGDEEFWNMEIFKENPKDNEDEYQYERPGADVSDSDISHEVSKSEEAEEDGKLADEILLQEERKKDRKNKNGVYKDPLLARSKPKTKTRKSKKHKKNVKKIYRLRKSTAEQTETYKNIKVSDFSKKVEQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN2</accession>
    <name>A0ABV2ANN2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002697</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NEMF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001092">
        <property type="protein sequence ID" value="MES1921114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021846">
        <property type="entry name" value="NFACT-C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008532">
        <property type="entry name" value="NFACT_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051608">
        <property type="entry name" value="RQC_Subunit_NEMF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15239">
        <property type="entry name" value="NUCLEAR EXPORT MEDIATOR FACTOR NEMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15239:SF6">
        <property type="entry name" value="RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11923">
        <property type="entry name" value="NFACT-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05670">
        <property type="entry name" value="NFACT-R_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NFACT RNA-binding" evidence="5">
        <location>
            <begin position="136"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="domain" description="NFACT protein C-terminal" evidence="6">
        <location>
            <begin position="328"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF05670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF11923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="421" mass="48597" checksum="8D57A0F527C7D7DB" modified="2025-10-08" version="1">MDWKDLNKFIESQAKLGNPVAKSIFSLNLNENEIILNLSFCTNEKIYQNKIDQNCICDDNFNCQEIKIRVDLSQSALSNARRYYNKKKLSKVKQDKTKLMSKKAIKLAEKKSLKILQKRQLNLKLDFARQKYWFEKFFWFKTSEGLLAICGKDKPQSKMILNKMINITSDYLVGVENDPSSFVIVKGVGEFDDINIPIESLKEAGCIAISKSTTWKDRNVLSPFWIYSNQVTPSEKAFYSIKGQLNFLPHQILSFALTFYYKIPNYVKTKDDGNFKQNDNIDKNDDDSTNLETCWSCGLVVLKNDHNCKYSKTFEDLNEKGFENNKCFDILKSFVLEPNSNQKIEYAVPVCLSKTQIRKSELFFEFYPGSLTRGKAAKEIYGALTNGEKKNLDRKLEIIRNTVSLNDIVTSVVQNNVRVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANU3</accession>
    <name>A0ABV2ANU3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">50S ribosomal protein L32, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002597</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bL32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001003">
        <property type="protein sequence ID" value="MES1920992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002677">
        <property type="entry name" value="Ribosomal_bL32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01031">
        <property type="entry name" value="rpmF_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01783">
        <property type="entry name" value="Ribosomal_L32p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="Zn-binding ribosomal proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="201"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="201"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="248" mass="29571" checksum="91C586409DCD6F23" modified="2025-10-08" version="1">MAFLFPINNMNYLPFLITNFLRIFSSGFLFGVPKNRISRSRGRIRRHYRRVAKGPKPTPYRICPTCDQPVRLHYICMNCYHANNKKSETIYKRGVNETNKIYKFDSKIFAKKNSEKSLKLAHKVNTTKNSEKISENALDVDGNNKTSKVTQLFYYKPAKYHFDPPKTEKADPFQIKRIYKAKKKRLSDLRSERVETILKQEEHDKRKNTEEYQNKTTDYKDRNRHHFIKKIEENVQNILKQNDKEISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV3</accession>
    <name>A0ABV2ANV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Bromodomain containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002612</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001015">
        <property type="protein sequence ID" value="MES1921007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04369">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027353">
        <property type="entry name" value="NET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038336">
        <property type="entry name" value="NET_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45926">
        <property type="entry name" value="OSJNBA0053K19.4 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17035">
        <property type="entry name" value="BET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00503">
        <property type="entry name" value="BROMODOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51525">
        <property type="entry name" value="NET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Bromo" evidence="5">
        <location>
            <begin position="19"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="NET" evidence="6">
        <location>
            <begin position="108"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="193" mass="22123" checksum="B2BFF361C4BCC7F2" modified="2025-10-08" version="1">MGEKPSEMEECLKLCNLLQSKPEAEAFLSPVDWKALNLPDYPQIIKQPMDLGTIEKNLKQNVYKDSHEFSKDMRLIWKNAKTYNQEGSGIYVVAHQLEGLFEKRFANIHKSATKKRESTQKEREIFTTLVKQLTAEQLGLVVEMIELKCPQALSEGGQDDLEIEVYDIDGESMEKLNDLVKKCVEENAQTVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP88</accession>
    <name>A0ABV2AP88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002781</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001164">
        <property type="protein sequence ID" value="MES1921218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11199" checksum="54BC21DD88CE9D13" modified="2025-10-08" version="1" fragment="single">ATIPPCASITLNQAAYSNSTDISLRVKIIPNTDLCLKIKKDSEESYSGDCIPIQDDGVDFGKLESATKYLFEIYSYVNISNGSLVLSTESCEDKFPTYTSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC6</accession>
    <name>A0ABV2APC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003041</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001433">
        <property type="protein sequence ID" value="MES1921515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20445" checksum="BAF2FBFCDCC3F633" modified="2025-10-08" version="1" fragment="single">MKWLQKRDNLLKIIFALDSQTEKGEQEDNQNEISQLLSNIFDYYFHNDFEMKSTNYQSKPEYSKMRHKSSFKLIICILNKIISKFASTDQKSENNQISTNELEKVHKIYFQKFLKSFFKISEMTLNSKEFSDAIQFRKCDLDSVSFLTKNSVFFLLPAIVTVLNTDSIINDKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APH0</accession>
    <name>A0ABV2APH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003091</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001483">
        <property type="protein sequence ID" value="MES1921560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20851" checksum="66728AB3B91935C3" modified="2025-10-08" version="1">MKYVDRTWASKTEKDYFESSRKREEIEASENKPKASMKQKERNTGKERNSKSSEEKIIKVEKVEKKEDNLIDLNDIFSSQNNTKDVKPNGAIDGENFDFNSSKNLLGDEKNSAENLSQLVNNINLMDKKPGQELQKEEKVCKVKDPFRDLFELSMAKSEFDRKSVSKKTVDEKEDALLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN0</accession>
    <name>A0ABV2APN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002951</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001335">
        <property type="protein sequence ID" value="MES1921419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="236"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="267"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="320"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="364"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="401"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="428"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="461"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="500"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="500" mass="56176" checksum="7C594323213ADDB4" modified="2025-10-08" version="1" fragment="single">PGRIHFSLFNFANDPKGGQIHLTVRSERVEYSYNIKIRYTKQSVKACAEQNKWFDRFTGECRDCDETGVFCPGVGISVPRLGFWAPDENAIPVVCPNRFACSETDYLLTESFDTECNDAGVRNGYLCDNCGAGTYRDIFVCKDCVGGKKSSGEVVPLAVSIVFYSVVAVCSVISVKIKATIFIAFVIVSQLSLIFRTLLSFKNIPFLSFLDILNFNISYLRQFCSNNSLFNLVSAFWLQTAFLVSVMAIFCIPMAIKWLIYKNRLSLKLVPSILNGLFFANVLIYKSVASMSVKIVGCARFPWGAEPDDLTERFCPDGGYFFSMAMGIMLMLAHTVGLPCFVAWRMQKMTAKNGEENKFFSGMFGFLVYFLRPQLTLFVLFIFGMDIFLAIDPVLYGSLGIYGAVVTIPFGAFLLLVTFLWPFKSDLFNLASIGIYTLMIAIIVLLLFVSKNDFHLYRDSSSLATIVTFVLCGITALMVLIVAFKFYNSYKRNKNDIEQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU3</accession>
    <name>A0ABV2APU3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003233</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001648">
        <property type="protein sequence ID" value="MES1921703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="122" mass="13971" checksum="F557E65F28287F56" modified="2025-10-08" version="1" fragment="single">MNKNKSLNAQDAEQKVAEDKTKRLKSFSNVDLLKHCQNEKMTDAAMKEIFLRYSVNSKNLTATELISLLFDILRSCDLAPVVPESAIHDVLSEFALNVEHEQSVSLTEFKTFFLYFQQTPIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ00</accession>
    <name>A0ABV2AQ00_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Proteasome subunit alpha type</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PSMA5</name>
        <name evidence="5" type="ORF">MHBO_003280</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3">The 26S proteasome consists of a 20S proteasome core and two 19S regulatory subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the peptidase T1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001716">
        <property type="protein sequence ID" value="MES1921751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000426">
        <property type="entry name" value="Proteasome_asu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003075">
        <property type="entry name" value="PRK03996.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10584">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00948">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00388">
        <property type="entry name" value="PROTEASOME_ALPHA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="1 2 3" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasome alpha-type subunits" evidence="4">
        <location>
            <begin position="8"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="27401" checksum="394D1B0693D9D6E9" modified="2025-10-08" version="1">MFLTRSDYDRGVNTFSPEGRLFQVEYASESIKLGTTAIGLQTNEGVVLAAEKRLMSPLVVPESIRKIFEIDHHMCTAFSGITADSQLLIDEARTACQNHFFHYNERMGVEACAQSVSDLALGFGEKGREMSRPFGVALLIAGIDDKEGPCLYHTDPAGTFTRCSAKAIGSGCENVQNVLEEHYAVTMSLESAKKLALQILKNTMEEKINPENVELAVVKLGSEKFEFVGNEEKLEIIGNLSDDILVGSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ05</accession>
    <name>A0ABV2AQ05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003293</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001732">
        <property type="protein sequence ID" value="MES1921762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="313" mass="36043" checksum="C5EE635064651A4B" modified="2025-10-08" version="1">MIFCAIFLSFVCSPPPLCKRFKIKDKYFIPKPSENRYYCSTAVLDIEIPANLQPLSEVNKICRVPYHFDSSHECEIKLTDHFEIYFYKKCNLANNYFNVKNNVLEDHILCEETGDNIYDINYFCQITKLQSSLIEDGGRNCKKGTFNNNHYFRGECVLNRPYFSINGDSTSEHLSCASNRDNIFDIKKFCRLTKSTSTLPAILFSEKGECNTFIKDEINYYGKCSFEKPFFYKNGVVLDDFIQCEETDTAHNLIKACEIPKSSERFTVDKSKCSSKDKDGKYFSEKCTNTDSNASGNLIRCDKGDLLCLIVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ40</accession>
    <name>A0ABV2AQ40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003116</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001510">
        <property type="protein sequence ID" value="MES1921584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046632238" evidence="1">
        <location>
            <begin position="20"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="12754" checksum="2EC731EA30F75FC2" modified="2025-10-08" version="1">MVYILILATFLFQKSFVNCECNGDLQLITYNCLYKIANGSRLLRVDLKMAGINRLVFVVKGSCYGILDQRYDSLIGQIKGPQANIYHCYLKTKNTNKDALAIITKENIVLIGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD4</accession>
    <name>A0ABV2AQD4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ubiquitin-like protease family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003410</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C48 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001888">
        <property type="protein sequence ID" value="MES1921875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.395.10">
        <property type="entry name" value="Adenoviral Proteinase, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003653">
        <property type="entry name" value="Peptidase_C48_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46915:SF2">
        <property type="entry name" value="UBIQUITIN-LIKE PROTEASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46915">
        <property type="entry name" value="UBIQUITIN-LIKE PROTEASE 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02902">
        <property type="entry name" value="Peptidase_C48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50600">
        <property type="entry name" value="ULP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0788">Thiol protease</keyword>
    <feature type="domain" description="Ubiquitin-like protease family profile" evidence="6">
        <location>
            <begin position="140"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="39"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="26453" checksum="4ADC98F6E13AE4D4" modified="2025-10-08" version="1">MVNLSNSFFYNILNYFSNPCRDDQYVETNENISTPQKEIPHLMNSINDLEERIGRLKIEDDYLQQQIVDLNERTKSFLKPSPAFKFRKRVPKLKTSPKLTKLQKKLLNFKKRKITKNEKNILKRLENGLENATASEFDNFLVTFNDMQCLNPGKWLNDEIINFYMGLLQKRSDERMVVRKERDFFFNTFFYTTLTGNNMSSYHYNNVRRWTKRKKVKNNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG7</accession>
    <name>A0ABV2AQG7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed DNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003431</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001914">
        <property type="protein sequence ID" value="MES1921901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.20">
        <property type="entry name" value="5' to 3' exonuclease, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019760">
        <property type="entry name" value="DNA-dir_DNA_pol_A_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001098">
        <property type="entry name" value="DNA-dir_DNA_pol_A_palm_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002298">
        <property type="entry name" value="DNA_polymerase_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133">
        <property type="entry name" value="DNA POLYMERASE I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133:SF62">
        <property type="entry name" value="DNA POLYMERASE THETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00476">
        <property type="entry name" value="DNA_pol_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00868">
        <property type="entry name" value="DNAPOLI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00482">
        <property type="entry name" value="POLAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00447">
        <property type="entry name" value="DNA_POLYMERASE_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA-directed DNA polymerase family A palm" evidence="6">
        <location>
            <begin position="13"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00049244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="29972" checksum="03B7354458F73202" modified="2025-10-08" version="1">MANLKSTNLAELGLVSRQLVVSGKHRIFVSSDFSQIEARIATHFSQDKFLINAFKTDKDIFSMLSTDLFRTENITPKIRENAKQIFYGVLYGQGINSLAKELKISKSDCKSIESHFHNQFLSLKRLVQQCYKQSAENGFIKSFLGRKRFFDTKNGENLENGEKMSLKRKAVNSLCQSSAADLLKMALVKIEKERKKVFENSAKLVLLVHDEIVYSVDEQIVELFAKMMKNKMENCAILKNVPLKVTIKTGKNWGQMEKLFKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP6</accession>
    <name>A0ABV2AQP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Rim15, signal transduction response regulator</fullName>
            <ecNumber evidence="7">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RIM15</name>
        <name evidence="7" type="ORF">MHBO_003342</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010001798">
        <property type="protein sequence ID" value="MES1921809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="38"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23241" checksum="B4BD3239241A6345" modified="2025-10-08" version="1">MENTESKGLNSEKEEFEATKCSFKANGHTNCSKTIKDYGPLRKIHTNESCQVYEVEDTVTKEHFTLKLCKKGDFNEFQNNEIRNLTYLHDIEGDFVRCEHLFTTKTHNIFVLELLMCDFKGFLDGRGSKLSLKTARVVVKKLARIMIILHNNGIIYADLIPENIMIDKNGNLKLIDFDQSYKIGETYTKSFLPCGNLLHMGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY1</accession>
    <name>A0ABV2AQY1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribosomal protein S5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPS5_1</name>
        <name evidence="4" type="ORF">MHBO_003601</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002193">
        <property type="protein sequence ID" value="MES1922083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.455.10">
        <property type="entry name" value="Ribosomal protein S7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000235">
        <property type="entry name" value="Ribosomal_uS7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036823">
        <property type="entry name" value="Ribosomal_uS7_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11205">
        <property type="entry name" value="RIBOSOMAL PROTEIN S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47973">
        <property type="entry name" value="Ribosomal protein S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8313" checksum="5CB486445F9D0A4B" modified="2025-10-08" version="1">MVFFVTQRSFSNVDCSDIALRDYISLERPLYVPHTAGRYQNKQFRKAKCPVVERLTNSLMMHGRNSGKKQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA6</accession>
    <name>A0ABV2ARA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003717</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002385">
        <property type="protein sequence ID" value="MES1922206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="21389" checksum="F4BC1AD990F8043F" modified="2025-10-08" version="1" fragment="single">HLECTDENDMFMDILKDTRWVDDDLQSFLDVAIQSRRPVTIKVLLSLVSTIPFPKFFLLLFEMDEETCVEVFQREKYRDRKNLLAALQRACLMNMKTLVREILKQGVKLQPVVLLTDFSFGITEILIKEYPWCLRELHEIEKILTNPRSNRLLKSEIQKKPETAESGSINTDKHTVLYERNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARB8</accession>
    <name>A0ABV2ARB8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">RNA polymerase sigma factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003724</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002399">
        <property type="protein sequence ID" value="MES1922213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06171">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="RNA POLYMERASE ECF-TYPE SIGMA FACTO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133:SF8">
        <property type="entry name" value="RNA POLYMERASE SIGMA FACTOR HI_1459-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="Sigma2 domain of RNA polymerase sigma factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="Sigma3 and sigma4 domains of RNA polymerase sigma factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA polymerase sigma-70 region 2" evidence="6">
        <location>
            <begin position="10"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase sigma factor 70 region 4 type 2" evidence="7">
        <location>
            <begin position="108"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="171" mass="20263" checksum="B20CAAC41702D6CE" modified="2025-10-08" version="1">MEKYQIDAIRSEKRKLMHRLIKQSKNAADAEDIYQNAMLKICRFAGKKEFASKDHFRAWMFHIVVNEAINFFKYKQRKWGSIDTNVDVDIECGKRLSIESIDEETLLQILTETSDTLPPGRKEVFYMTYIQNLSEEEIANRMCIAQSTVRTRNWESRKKFKENIKKVSWLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC6</accession>
    <name>A0ABV2ARC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">THUMP domain-containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">THUMPD1</name>
        <name evidence="2" type="ORF">MHBO_003537</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002084">
        <property type="protein sequence ID" value="MES1922019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd11717">
        <property type="entry name" value="THUMP_THUMPD1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2300.10">
        <property type="entry name" value="THUMP superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004114">
        <property type="entry name" value="THUMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040183">
        <property type="entry name" value="THUMPD1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13452">
        <property type="entry name" value="THUMP DOMAIN CONTAINING PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13452:SF10">
        <property type="entry name" value="THUMP DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02926">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143437">
        <property type="entry name" value="THUMP domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THUMP" evidence="1">
        <location>
            <begin position="128"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22691" checksum="955955804492E723" modified="2025-10-08" version="1" fragment="single">LRKMAKYNCRYGQNALLATCPQRKEFKAVEELSQFLDNLNIDQNLANNNQEKFVDVQRELEKEISVISKNRLYSNVNLKCKGLIVLALKKEIDINETICKIFENCANFGKIPKFVIRLLPIKICRPFIEDIKETFENLIKKQNFDKSLEKTFCIQIKRRGNVIERDLIIREIECLVKKYSKIDKVSLRNADFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL3</accession>
    <name>A0ABV2ARL3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Bax inhibitor 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003608</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the BI1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002201">
        <property type="protein sequence ID" value="MES1922091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006214">
        <property type="entry name" value="Bax_inhibitor_1-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23291:SF32">
        <property type="entry name" value="BAX INHIBITOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23291">
        <property type="entry name" value="BAX INHIBITOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01027">
        <property type="entry name" value="Bax1-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="84"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="208"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="240" mass="26582" checksum="34BC56E4CF77DBDF" modified="2025-10-08" version="1">MSFFQTAQNTDYRKAFALSDLSKGTQEHLSRVYGLLSFATTLTALTTLFCMRSSMSESLMAVATITVFLSFFAFVFASPENQKLKIALFLVISAAKGAILAPLLNLAVSIDPAIVVTALVGTVSIFLCFSISALYAKRRQYLFLGAILGAGMLILSVLALANVFIRSESLLSLELYGGLMMFCLYVLYDTQLIIFKAEMGDRDVAGHAMALFTDLFAIFVRLLIILMRRNESKERKRRNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ3</accession>
    <name>A0ABV2ARQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002195">
        <property type="protein sequence ID" value="MES1922088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.30">
        <property type="entry name" value="MOB kinase activator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005301">
        <property type="entry name" value="MOB_kinase_act_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036703">
        <property type="entry name" value="MOB_kinase_act_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22599">
        <property type="entry name" value="MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03637">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01388">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101152">
        <property type="entry name" value="Mob1/phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15446" checksum="FAF216953FC8653E" modified="2025-10-08" version="1">MTAGKKYTFLWASNEKSKPVNVSAPKYVKLLFEWVGEQTNDESLFPVEEEQDFPKNFKKRVNGIYRRLFRVFAHIYHNHLNQMKEKGYEAHLNSCFKHFVIFCNEFKLLDQNNFDPLKNLVLRILKDEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART6</accession>
    <name>A0ABV2ART6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003893</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002706">
        <property type="protein sequence ID" value="MES1922385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="30980" checksum="BA36D3995F59DD1A" modified="2025-10-08" version="1" fragment="single">MVTANGKIDRAHEKVIDEYGDKFHEETKDNGIILEKTIEGKTEKDTDLEEMSLDQICDLYVMSLNPDFENRMMKNNKYTEASVNKLMNHINEIVSDNPSLLEYAEDISKFYSWAYGEINPTYQQMYYTDMPYSEGYSPDVIIGNKQDALNSDDYNSNSNVLGRNAIAKRIHNSEIGLKEGTTKKVSDYKDQMLFFASFGKTIQDINSILSNPKVAGAIKQQKGTNLYSLLTKHLNDIASDGTNIERMLSDKLIDRLWTNAVGASLGINPKLIVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY1</accession>
    <name>A0ABV2ARY1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Secreted beta-glucosidase sun1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SUN1</name>
        <name evidence="6" type="ORF">MHBO_003722</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002396">
        <property type="protein sequence ID" value="MES1922211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.260">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045119">
        <property type="entry name" value="SUN1-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012919">
        <property type="entry name" value="SUN_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12911:SF8">
        <property type="entry name" value="KLAROID PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12911">
        <property type="entry name" value="SAD1/UNC-84-LIKE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07738">
        <property type="entry name" value="Sad1_UNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51469">
        <property type="entry name" value="SUN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="SUN" evidence="5">
        <location>
            <begin position="1"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="19742" checksum="9D6B926F4B9EA0E3" modified="2025-10-08" version="1" fragment="single">KCSKNSHEQFAKLRDGDQVDWANSQSGGHVLTTGNIYKKGIFRFRKRPMNTFISPITAVGDCYAFQPSNGYVVLGMRSPIFPTTFVYESVNADANPSSGSMPKTVKVSAVDENERLVDLSPDGNAFALKESEIRQSFELKRMEKAVKRIRVDFVENNGNKDFTCVYRIRVFGERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS27</accession>
    <name>A0ABV2AS27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Multiple myeloma tumor-associated protein 2-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003988</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002906">
        <property type="protein sequence ID" value="MES1922471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019315">
        <property type="entry name" value="MMTA2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039207">
        <property type="entry name" value="MMTAG2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14580:SF0">
        <property type="entry name" value="MULTIPLE MYELOMA TUMOR-ASSOCIATED PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14580">
        <property type="entry name" value="MULTIPLE MYELOMA TUMOR-ASSOCIATED PROTEIN 2 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10159">
        <property type="entry name" value="MMtag"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Multiple myeloma tumor-associated protein 2-like N-terminal" evidence="2">
        <location>
            <begin position="22"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19308" checksum="C52119C1A1C62F46" modified="2025-10-08" version="1">MVYPSKKPQEGLPGMPYDVRPGVRGGTDQFSWQDVKATRERSYYLGSTVRAPYGRWQKDRDVYWYNRAANDNDPVDAVELEKRALRKREKIMRENAIKGVSNRHFLVEAQALEKFEIERAFAPGEEKEGRDPTMGLGFKPDPLADGPVLPEGAVAFSVFILSNPIFLFAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG6</accession>
    <name>A0ABV2ASG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Protein RRP5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">PDCD11</name>
        <name evidence="1" type="ORF">MHBO_003935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002769">
        <property type="protein sequence ID" value="MES1922424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045209">
        <property type="entry name" value="Rrp5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23270">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23270:SF10">
        <property type="entry name" value="PROTEIN RRP5 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21959" checksum="73F009349A2D8683" modified="2025-10-08" version="1">MLISSSKQDIGVWISYSKFLFKHSDEIPPESVLKRSRFLTESPVSKKDKTEKSKNAKKLLSKALNVLDKRLHFQFLLRFAKTEFLFGSKIEARQTFSDLLQAHQRNSRAWGTLIDLETDLLKKNSGSSDQKEICRVIFEKALSADLPLKEVKFVFSRYLDFADQFCSEKEVLEVKNKAREYALKMKNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI2</accession>
    <name>A0ABV2ASI2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004159</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003303">
        <property type="protein sequence ID" value="MES1922640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="113" mass="12952" checksum="95EFC4C52D6435DD" modified="2025-10-08" version="1" fragment="single">QFSAKLLCSPDNKTSLNSLGNFPLLVCYLSPEYNKKSYVSEKNVVYVLEIIAESLRSNIEMQKFLIDRAGIDCFKYLFIDPIPKKYRTLRTLGIIKRILVIFQNLGHVSFSGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR8</accession>
    <name>A0ABV2ASR8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HECT-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.26</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004244</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.26"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003506">
        <property type="protein sequence ID" value="MES1922720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044611">
        <property type="entry name" value="E3A/B/C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45700:SF8">
        <property type="entry name" value="HECT-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45700">
        <property type="entry name" value="UBIQUITIN-PROTEIN LIGASE E3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="HECT" evidence="6">
        <location>
            <begin position="189"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26803" checksum="E3CF8EBA7B5C82E8" modified="2025-10-08" version="1" fragment="single">NPLISDPENLKVIKNLAKIVKILPIEYKKVLVQYFTETPNGTLKNIVDVIHQYIAIELVAKPDFISKNAIRLLTILETIYKSNKISKKLSYKAFYSEAINQDRIEKKKFNIYFATKRSVIRMHQFYFIFGPVIKSKILKTVLDEQRRKNIENVVLNSIFSGRRMTPFVRIKVSRDNIIRDTLGQLSFLTAEDLNKPLRVSFKEELGVDEGGVRKEFFQLIVKQLFDPKYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT44</accession>
    <name>A0ABV2AT44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004336</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003799">
        <property type="protein sequence ID" value="MES1922812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7255" checksum="7E631140E05ECC01" modified="2025-10-08" version="1">MDIANSSKVRAMLFQNFCTPPKQLRWDESIIRKGYKHVIATTIDGVSSVGGSSRSSIPMVTVKQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC6</accession>
    <name>A0ABV2ATC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DnaJ (Hsp40), subfamily A, member 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DNAJA4</name>
        <name evidence="3" type="ORF">MHBO_004262</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003549">
        <property type="protein sequence ID" value="MES1922739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044713">
        <property type="entry name" value="DNJA1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43888">
        <property type="entry name" value="DNAJ-LIKE-2, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chaperone DnaJ C-terminal" evidence="2">
        <location>
            <begin position="2"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="124"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="20872" checksum="7FE232C33F6D67C0" modified="2025-10-08" version="1">MNLFLKKGITLTDALYGTQFAIKHLDNRILKVSTKGTIVSPREVRCIENEGMPLHTRPFVKGALFVEFDVKFPNAKNISSENLEVFGSTVENQIIAEPTVETARLETGFVRRGRIDEQIFRGNKEQPESVHSVQQPKRRERRGNGSTSFLQNSVVALNREFAFKNLEFLFTHFKSGRTIFVNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG1</accession>
    <name>A0ABV2ATG1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004486</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004138">
        <property type="protein sequence ID" value="MES1922955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041367">
        <property type="entry name" value="Znf-CCCH_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18044">
        <property type="entry name" value="zf-CCCH_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="43"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="43"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="145"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="154"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="23466" checksum="A4672074FE7CDA83" modified="2025-10-08" version="1" fragment="single">MNNTTPTGMKSPLVVKFARDVRKNIRKIRINDENGIFSENDFQSGPIICKYFQSGKCNRGDDCNYSHAVEDYPAKSNLIRSLSTWGVIKNTPKNGPFNHIQHFPNALFLNAPPYEPSFNTQSLHSARPEFNPQTTSEEQNFFEDFGRRNENGPDENSQNATSNFGSFGVRDATTSSYAAGLSAEPNLIAQSDSAAKISFDKIGSENQTMHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN4</accession>
    <name>A0ABV2ATN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Charged multivesicular body protein 1b</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CHMP1B</name>
        <name evidence="2" type="ORF">MHBO_004541</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004338">
        <property type="protein sequence ID" value="MES1923007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10476">
        <property type="entry name" value="CHARGED MULTIVESICULAR BODY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="22647" checksum="8EBE9F6B17A32B7C" modified="2025-10-08" version="1">MAKKIEENLFNLKFAAKQYEREARRFEKRARAERIKIKTYIERGDIDSATVHSENAIKFKNQSVRYLALSSRVESAYNTVNSAVNMQMVTKSMKGIVRALESSADLNDMDKMTDTMDKFEKECENANIRTDYMEQAMTAVSSRTMRKEQAQELMQRVADEHGLEFSAEMEGVGVPGRKKETGNKELEERLKRLQEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT9</accession>
    <name>A0ABV2ATT9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glutamate-rich WD repeat-containing protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004591</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004496">
        <property type="protein sequence ID" value="MES1923057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051972">
        <property type="entry name" value="Glutamate-rich_WD_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45903">
        <property type="entry name" value="GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45903:SF1">
        <property type="entry name" value="GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="28"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="74"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00040876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19700" checksum="79B407B98D595C56" modified="2025-10-08" version="1" fragment="single">IFGSCSVDRSVCLWDLRTEKIAPVLNAKDLHSKHINVLSWNQHRSTQIATGSDDCSFKVWDLRHFDKKSPISYFKWHRKPITSLEWSPFDETVLMTSSEDDTIGIWDLSLENDIERKIKGAQLNQEVPPQLLFVHMGQQEIKESHFHPQIKNMVISTASKGYHLFIPENI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ3</accession>
    <name>A0ABV2ATZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003962">
        <property type="protein sequence ID" value="MES1922886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15258" checksum="E6A46EC06ECC4ED7" modified="2025-10-08" version="1" fragment="single">ISSNSVSVERGKSNVTDLTLTVPFPCPFHTYQSRDPENCQLRIEMIVPTGNSKTCSAQLASDSGCGIKVYRHEWNNTKSFTIIHKDSGKYIVEREKKLFLKTYEIKWSKMWSFNTLPVINVCILFDSFTNIKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU76</accession>
    <name>A0ABV2AU76_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004754</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005117">
        <property type="protein sequence ID" value="MES1923211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="41"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="25311" checksum="43AE373BA0470B74" modified="2025-10-08" version="1" fragment="single">TEKLLSIEIKDRPRLAKQIYLCFRVFLLQVSPEKPHFSENMKILENIVLSLKNDIKNINRENNNFNNIAEKLKFVDLFANLYPDKFFPFFWCFSANEFNHEKLVFTPCLNFLLQNSFGDSNGDMDIADFHLTGTDFKLVNVAKARAQTKFDLKNGDILETKKKRPIMAEFEENYRNRFFEKREQIENFSSQFSERFLGDLSKKVDFDFVENWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK4</accession>
    <name>A0ABV2AUK4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004652</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004720">
        <property type="protein sequence ID" value="MES1923111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="21953" checksum="6F05843FF5C56850" modified="2025-10-08" version="1" fragment="single">NPWLTEQKYQKQEVNAEACGTYKKFEFKRWDGSSYVKILQQRVCDWKDLQSEFSFLVRNSLSGWVTKDGQKVVAHSNGKNVISSKDQNAPVWCCKRKSLNIGEKCLQPSDCVTWICHYRCLKSFSTAGWSDHKDKSPGPDEEMLDTIRLVTLIVLGSTFTFILCLKVSVAFSPVNGICCLLCRCRERLPGEGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV33</accession>
    <name>A0ABV2AV33_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Clathrin heavy chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004801</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005334">
        <property type="protein sequence ID" value="MES1923257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055358">
        <property type="entry name" value="CHCR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000547">
        <property type="entry name" value="Clathrin_H-chain/VPS_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10292:SF1">
        <property type="entry name" value="CLATHRIN HEAVY CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10292">
        <property type="entry name" value="CLATHRIN HEAVY CHAIN RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00637">
        <property type="entry name" value="Clathrin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50236">
        <property type="entry name" value="CHCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="CHCR" evidence="1">
        <location>
            <begin position="1"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="161" mass="18826" checksum="C630B63BE2DE394B" modified="2025-10-08" version="1" fragment="single">MEYLLSVQKLNLLSVNNAVNNIMIEEENCEGLKKSIENYNNFDIRKMANELKNHPLRKFRAISAQLFNKNGDFEKALELLKNDEMYEEMIKTVSLSKSRNRAEDLLSFFIKQENEYFVAATLFDCRSLIRPHVAIEVAWKKGMSECAMPFVIQSVFNFEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEG9</accession>
    <name>A0ABV2AEG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000122</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000015">
        <property type="protein sequence ID" value="MES1918101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010770">
        <property type="entry name" value="Ecd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13060:SF0">
        <property type="entry name" value="PROTEIN ECDYSONELESS HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13060">
        <property type="entry name" value="SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07093">
        <property type="entry name" value="SGT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="537" mass="61923" checksum="BAFEC1F447F4DC1A" modified="2025-10-08" version="1">MFVSSKSLHQIFRFLENCAYLESVTSIGDNISDEWFTTAAVFEITKLFPVAAQITDSDGQFMLIEAAESLPEETTPDNSSNRLFVVDGELRFISSDFLGKTSKKFSSEILRKLGIGEALKIVFETPKDLISVTSEFFEPIQRRINSFDDVLRKEIKNSQTHNFSVKAPEKVLRLLKILPSLVSVAAKAYCFRNPIDNNELRKMAHFRPENFAFHKIRTSRFVYAQLRSAKHFHSRQFLDASFYENREMSLSEEIGAKITFGLEILMSEGNRHLKKDGDINFDDCSQIVSNFECEFEDFRKHLEQIKNQKCSAKIAKKIFVLKILAENAKFGRKHYKHLKFSSQLIYSKLLQKVLKHFPPQTFPKNLNELQPNDSDEWMEVDPNDLNLFFMESASFENEKIGDLKNLNFAEDVQKFINADSGYKGIDFQNLYFEDDLSFDEEDCFHEERIFKGDKFLNPNGVFRAINNRDSNNKFDEENSFKAISKETDAEFLAKSKENMADINIDENLVRNFVTSIEKEEGGSGPASNLLSQLRDTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEM1</accession>
    <name>A0ABV2AEM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005283</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16296" checksum="32E10AD420EB6DFC" modified="2025-10-08" version="1">MNCFAVFRKRGIDTQIPWNRFIGATRLVLSKTKKTCTIYVINIDWFAFGVEQVATFAGKANSSFSRSGHPVYGRKQILLQTANGDFLSIFKNAIGNFAKLFPDEYFFVVNFAFVTGIEVVEFSHLVFVCVLKYINQRILVYPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AET6</accession>
    <name>A0ABV2AET6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000214</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="20"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22353" checksum="312B7ED3A245D2AF" modified="2025-10-08" version="1">MKGEQNKSLVKENRYLLKELDIFKQNCFSLQNEIENIRKALDKATNKAEADKIEVENMRKREKYLKKDILNLESMKNENKQDITAEKQSLDNSEFVKSIVSHWGNNWNSFLDENVLKSARNEGALWLEMANLSPAKVVFKKEDKIMLEIQLNPDWSLLKDKNCDIVENFVEANVDITKLGKAFLFNHNNCAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEW3</accession>
    <name>A0ABV2AEW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">TATA box-binding protein-like protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">TBP2</name>
        <name evidence="6" type="ORF">MHBO_000224</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04516">
        <property type="entry name" value="TBP_eukaryotes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.10">
        <property type="entry name" value="TATA-Binding Protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00408">
        <property type="entry name" value="TATA_bind_prot_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000814">
        <property type="entry name" value="TBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030491">
        <property type="entry name" value="TBP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012295">
        <property type="entry name" value="TBP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033710">
        <property type="entry name" value="TBP_eukaryotic"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10126">
        <property type="entry name" value="TATA-BOX BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00352">
        <property type="entry name" value="TBP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00686">
        <property type="entry name" value="TIFACTORIID"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55945">
        <property type="entry name" value="TATA-box binding protein-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00351">
        <property type="entry name" value="TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25661" checksum="764440612E359E37" modified="2025-10-08" version="1">MASKSTKNVTTDKTKNSTKMDKIKIQFCYLLNRNVVSSFDCKCELDLKQIARGARNSEYNPQKFSAVIMRIRSPKTTALLFKSGKVIVTGAKRENESLRAARKFARIVQKLSFPVKFSGFSICNMVGSLAVDYSIRLEGLAYDFHNFSSYEPELFPGLVYRMKEPKVVFLVFVTGKIVVTGAKKEKDMCEATKKFLPIVQKYRKTLKYDLRLSDFDESSDFFHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFD5</accession>
    <name>A0ABV2AFD5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Vacuolar protein sorting-associated protein 13 VPS13 adaptor binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000364</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000054">
        <property type="protein sequence ID" value="MES1918393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009543">
        <property type="entry name" value="VPS13_VAB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25036">
        <property type="entry name" value="VPS13_VAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Vacuolar protein sorting-associated protein 13 VPS13 adaptor binding" evidence="1">
        <location>
            <begin position="463"/>
            <end position="1013"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1048"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1048" mass="121840" checksum="5D1F96DE76B17AF3" modified="2025-10-08" version="1" fragment="single">PNFENFAIAKMQNFDKILALKFISNDINVLSFIGDNKLVINAKIPFFKAFDGFLDDFKEMALKDEILFFDLQHFYVEFIDKKFNWINEDDNKKILLSFLQSVEIRLNERNLRLLRNCRNFLDDLLFSKNAKTAENTNLAKSENLAKKTKNDRKKDLKIGVFSNEGLDVKEVTATILDYPFIEARFMLEECKIVTLHWVKDVNLDKIIFFPLTKFWFKNVDADFGSFSDFRFGNVNFWSVLTSFNEELNESPILESNDYEFCFKEKNKIQKFYFKTKKDTNINIISHFALQFKHLSEILNLCKMKKIYKKEDEKNSVLKCAKNCIFLKNEFEVAILLEIENELTRIEPFGFCCLVVDIDAKANIYLEGYETSPIVDIPLLSKALNVHMVIPKNSVAKSIRKYKRKLKRPKSQMSKLRVFDRKMNRIESSSRSFHFHKNATSSKCKSKSSYLEKADDSDDFDIVSSSESMSFESKGSLIYEDYKEKQSSFLVLMETIPQESATKILLHSSVKILNKTEIDFKIDSLIVKKGEEKWLSLESANAGNFDFEPLFGENSHFECEKTKFWFESVDSVCKIVDSFLKRDPKSSLTFCFVMSYDRSPKQKTIKIFPFFRFVNCLPEDIVVTIDDNKPKLIKSGSSSTFFNVQKESKIRKIEMGRIGFKTTKEIIIRHNLKKLGKSVKTIKIEMENDEKVKFKVSCELKLKNFKLSVSLFVPIWLFDFTDKNLIFKSAKDGVSISPPKKSKNTINCQMVDEDKNSAFLLCKTPNSKNFSDPFSLEAIETISTISNVTESQQNKILLIELTYKTIFGKDKFFRTKIAKFHPKFVVQNKLPFSILLRTSDIDCDKNDSTSSLVTIKSMRTLITFPKSSTTTKSSPSLTSQKRKNSEIKIGENEVKMFYFALEKDNKLGRKISIKDEKEEFDWSSFVDVEMVGENYLKLSRFFELNRFLIVSVDIILKGATYFIVFYMKDLALLPFLIENRTLDTKIQITQINFDSWITLGSKQSIYFAWNDPNKLKKIKIRIKGDTTTEKILPFQNNQQDKIKIGALRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK2</accession>
    <name>A0ABV2AFK2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">La ribonucleoprotein domain member 1B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">LARP1B</name>
        <name evidence="4" type="ORF">MHBO_000414</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006630">
        <property type="entry name" value="La_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05383">
        <property type="entry name" value="La"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00715">
        <property type="entry name" value="LA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50961">
        <property type="entry name" value="HTH_LA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="HTH La-type RNA-binding" evidence="3">
        <location>
            <begin position="185"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="42155" checksum="F41D143D84C15B85" modified="2025-10-08" version="1">MDNNFEEESIFDQKVFLEIFSNLTKRKKKFEKIPKIDFNQINDILQNHFQTNCNKNSQNKLDHNKFCQKDYLLDSKYFNIDKNIIVNNNNDLFQNDNKNIIDHRKNGEDKKIDCSKLIEQNKDFDKTDFIKNAENNENLITTLLPYRFSSTKKLENYLAVFSPYFYLTPIASQFAIINDNINGLVRFHFVKRKEVFSQIKYYFSEKNLKNDEFLRRNADRNGFIKIDLLLEFPCLKFNLVSIDLIKECCVELKELEYFCGYIRSSQFWWKYKAVKLPKRPEANLAYDIPIKLMKDVLMDRLQYKKVNESSFAIFNEKKSKTKFCPFANFVNRNRIGYYDVTSNTNVFLRNLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR5</accession>
    <name>A0ABV2AFR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000478</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7914" checksum="65701627CFC91CBC" modified="2025-10-08" version="1">MTNANKEQWEHKKYISEKKSELFYLESIVNALDTFCNNKICKINQKLETIESEQDYLVARTNSIVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT4</accession>
    <name>A0ABV2AFT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000306</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000042">
        <property type="protein sequence ID" value="MES1918324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="12272" checksum="7F694BF6B82C12E8" modified="2025-10-08" version="1">MLRLGCKRLRPTIRFRRSFSEEHHGLKKKRNENLERYVSVEDRKGLMRILKKMQQRADPHSHEERLHLKDILLRHKVEHTSALEKDLREWRETIHTSKDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG07</accession>
    <name>A0ABV2AG07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Regulation of cyclin-dependent protein serine/threonine kinase activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CycB3</name>
        <name evidence="7" type="ORF">MHBO_000555</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the cyclin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000094">
        <property type="protein sequence ID" value="MES1918611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039361">
        <property type="entry name" value="Cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046965">
        <property type="entry name" value="Cyclin_A/B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004367">
        <property type="entry name" value="Cyclin_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006671">
        <property type="entry name" value="Cyclin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048258">
        <property type="entry name" value="Cyclins_cyclin-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10177">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02984">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00134">
        <property type="entry name" value="Cyclin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001771">
        <property type="entry name" value="Cyclin_A_B_D_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01332">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00292">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 4" id="KW-0195">Cyclin</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cyclin-like" evidence="5">
        <location>
            <begin position="18"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin C-terminal" evidence="6">
        <location>
            <begin position="111"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin-like" evidence="5">
        <location>
            <begin position="119"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28675" checksum="2E8E25A873731D0F" modified="2025-10-08" version="1">MRSVQTDLAPEMRTVLIDWLLEVQQNFKLKLETAFLAINFLDRFLSSFTLSRRNLQLTGCAALFLASKIEEVSPPLLRNFVFVCGGAGDTDDMLRMEELISKKLDWHFIVPTSLFFCERFLRVVGFKLAPKQCSEGNFSKENLDPDFVAEDLLKARNCALFLLELALLDYRFVGVEPSRVAAAATFFALKVYSSETDTVPLYMFSGWAEDDLVDCLSGFRGILEKGRAENSVFRKYEKLLDLKELMAIGLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG40</accession>
    <name>A0ABV2AG40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000387</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16047" checksum="B47210291F042E08" modified="2025-10-08" version="1">MKDLSNNLNVLNLILRFPFFRTTTEGLIIYGTKIRKQHGQIEHRQFVYRFRIRHQRFCRGTFDRPEKSHFVFCLKTNYRFGHSLGTVPALFLASNRIKEQEVAAIVVLSGFSSGLKTIDPNCGEFNTNFCLIEDTNQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG58</accession>
    <name>A0ABV2AG58_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000597</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000102">
        <property type="protein sequence ID" value="MES1918663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="14037" checksum="31C69A57E3939041" modified="2025-10-08" version="1">MKYLHHNRYDRMRRGRHYSENSDMEQPEFEDRRIPMIGRRQPDEPVPMPGDRYYGPISMVPMGMGPMPVRQNMMNVPMTMPMYETGPNMMGGPNMNGMNGPMYQGMPFYNSDLNRYGQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD9</accession>
    <name>A0ABV2AGD9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000424</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000065">
        <property type="protein sequence ID" value="MES1918458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="117"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="23353" checksum="68CD44823BE949A7" modified="2025-10-08" version="1">MPEKSYIIIGISLGILLLFLGVCLFLIIKHNLEMYNGYNLSVYKVTYISPEKRKQLFEEYKMNPLKGQSKYEGPVLEEPIFKDNKKYPFFIELKSSNPVDDAKAYFKDNEFNYYEKCRICNDEFKECNSKILCGYCRHIMCENCLIKMCFDILECPFCREHFADSRIKYISEKNGIEVGKSKNHSYYNILLFYDNLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI2</accession>
    <name>A0ABV2AGI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">rRNA-processing protein utp21</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UTP21</name>
        <name evidence="6" type="ORF">MHBO_000530</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000088">
        <property type="protein sequence ID" value="MES1918579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007319">
        <property type="entry name" value="WDR36/Utp21_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22840">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22840:SF12">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25168">
        <property type="entry name" value="Beta-prop_WDR36-Utp21_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04192">
        <property type="entry name" value="Utp21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="89"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="172"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="WDR36/Utp21 C-terminal" evidence="5">
        <location>
            <begin position="335"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="296"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="306"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="317"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="525" mass="61186" checksum="790C3322C93283B0" modified="2025-10-08" version="1">MCTSQAKERQWWNIITCHEKSNKAITWSFENKAMNKKKLSLKEKTIITTVSLSVCGNFCVVGTQSGNIYKFNMESSHFREKFIDENIGKSAHAGAIFGLCFESFNKTLISGATDSIIKVWNFEEARILRFLELRSPITKMKLHLETNLLGVTTNDFEITLIDISNMKMVREFETHFSRISDFTFHPNGRWLITTTTNGIVRVFDILSNILIDWFEFEDPPTSINFSPDERFLMTTHANSLAVHLWINKSHFMHLPTNSVNKNVPPKRFFLKAGNFSHFEEVDGKLTELDRNLLWNKNESNKDGDKNQNSNKENNQNKYDKNENKVLKKEKNSEIENLVVFSNSAKIDKWANLAFYDLIKERNRPIEPVKKMENAPFFLASLEDYNKNDEIEENDDLNKNISKFSDNKLIKILRRCEKITNYKEALEYLKKTNISKIDLDFQFIEEEEEIELFLKFFISLTNKFAHFEVVQSCLNLFFKTHSKEISRADSKLLAELSKNMNLISERLEDDVDETLCLLADVINSKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGL2</accession>
    <name>A0ABV2AGL2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Subfamily C, member 22</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DNAJC22</name>
        <name evidence="3" type="ORF">MHBO_000723</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000133">
        <property type="protein sequence ID" value="MES1918821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44733">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44733:SF1">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="330"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="417" mass="49013" checksum="644C6CBF69AA0559" modified="2025-10-08" version="1">MINSDAVSAYVCYITSGLFASHLIILERYEHAFLSLISFNFFSVGLIYDFFNIPKYAKQKQKNNTTSLAPEISFIAIFGQIFFGLYFYYVFFYLLPPLRDFENFLEYLLQYFYSGETNLFDTENVRNILETSHSLLNEALANFGIALAISKVGKVSNLDCNFWRVLGVLNLANAFFGEESIVFNIAMGVAYFQYRSKRLDGHKNINEDAKKFIVIRVRYGFKEIYTALLNFLLPKLKLLVSILLFYCSIITAVVFHAGITFTYEEKGDTLKTKYYFRDIISEVVGSDLWKAITNGYNFFSREIQRIGWRGMMDELNDLIVDRMERNKEISAYRFLKIDENASLEEIKGRYRKLALKWHPDKNVPNYSKEEQKHIFLRIQRAYEIIEKRRSEKIKEENARLRQSVKARILEWKDKVQC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR8</accession>
    <name>A0ABV2AGR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Class I-like SAM-binding methyltransferase superfamily</fullName>
            <ecNumber evidence="6">2.1.1.319</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PRMT2</name>
        <name evidence="6" type="ORF">MHBO_000410</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.319" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035242">
        <property type="term" value="F:protein-arginine omega-N asymmetric methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.160.11">
        <property type="entry name" value="Hnrnp arginine n-methyltransferase1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025799">
        <property type="entry name" value="Arg_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055135">
        <property type="entry name" value="PRMT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006:SF92">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22528">
        <property type="entry name" value="PRMT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51678">
        <property type="entry name" value="SAM_MT_PRMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein arginine N-methyltransferase" evidence="5">
        <location>
            <begin position="41"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF22528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="25295" checksum="BD715BC47C770AD9" modified="2025-10-08" version="1" fragment="single">DLIVSEWMGSMLLYESMLHSVINARDRFLSPNGIMLPAHCDMFIVPLDLTEYISEHVGFWDNVFDVKMSVLQEKARSEFFSTPVFTRTIKERELLSEEKIFYSFETKTVTEKDLDDILSVFDFEVEKDGDLHGFGCWFDVRFLKTVLSTNPKEPETHWKQTTLVFDEISKVRKGDKINGVISLSRSSLWGRHYEVIIKYWFGGNSNRHFQKKFPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX6</accession>
    <name>A0ABV2AGX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Calcium-regulated actin-bundling protein C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000821</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000158">
        <property type="protein sequence ID" value="MES1918934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053356">
        <property type="entry name" value="Calcium-reg_actin-bundling"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040810">
        <property type="entry name" value="F_actin_bund_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37009">
        <property type="entry name" value="EF-HAND DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37009:SF2">
        <property type="entry name" value="TOLA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18060">
        <property type="entry name" value="F_actin_bund_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calcium-regulated actin-bundling protein C-terminal" evidence="2">
        <location>
            <begin position="221"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="76"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="135"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="456" mass="52081" checksum="5755AB62FFF37DD4" modified="2025-10-08" version="1">MAELDEDKGDKGNSLGEFDAHRFLEQIKETKTIIELRQTSKNKFEIDRKQNMTLTEYLIFKYFKNKQNWKDYVETLQGDENEILKAKNLLNDAQMKLSKCKQLLSEAKKTEQTQREKSRISIEAHKKSVEKAEMAENAKTDALLKEKNANEATEEAEKAKIVAIEAEKQAKIALEQSKEAHNISMLSSKEAELADAQMEIAVKNAQVAEEDVRKLQIQSKKALDQLKHEELIQENKIKILIEKTKKGSNVQRNLAKHELAQTKQEDPLPLRTAKIKQEAAMRKSQRAHRIEQEKLASVYSAKEKAKQNKEKAINDEKISKKKLNESEDASMNSIKEKNAMNELYKKSLAESKEAQLAAMNAKNIFEQSQNAKEIAKIARDESELASRDASQAALKADKSLEEAKLAYNEAENYVKNSTKGMAKGSKWWIERKITEEKMHLPQSKGGMSKKNAYWLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY5</accession>
    <name>A0ABV2AGY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Zinc finger, matrin-type 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ZMAT2</name>
        <name evidence="7" type="ORF">MHBO_000832</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000162">
        <property type="protein sequence ID" value="MES1918948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003604">
        <property type="entry name" value="Matrin/U1-like-C_Znf_C2H2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040107">
        <property type="entry name" value="Snu23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022755">
        <property type="entry name" value="Znf_C2H2_jaz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45986">
        <property type="entry name" value="ZINC FINGER MATRIN-TYPE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45986:SF1">
        <property type="entry name" value="ZINC FINGER MATRIN-TYPE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12171">
        <property type="entry name" value="zf-C2H2_jaz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00451">
        <property type="entry name" value="ZnF_U1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="U1-type" evidence="6">
        <location>
            <begin position="46"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="81"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15640" checksum="170954A40D05FCA7" modified="2025-10-08" version="1">MIQNSRKSELAIPKRKPLQADDRKIELLKEVGKTNVITSSTPLSKRGGFYCESCECLLRDSHSYLDHVNGKKHQKLLGMHMRVQKSSVDQVRKKLKELKNRKIEKKEDETDIIQKMEAARIKEEKRKIKKRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH76</accession>
    <name>A0ABV2AH76_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome transmission fidelity protein 18</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CHTF18</name>
        <name evidence="2" type="ORF">MHBO_000893</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000179">
        <property type="protein sequence ID" value="MES1919015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00009">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23389">
        <property type="entry name" value="CHROMOSOME TRANSMISSION FIDELITY FACTOR 18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23389:SF3">
        <property type="entry name" value="CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="1">
        <location>
            <begin position="132"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="592" mass="68545" checksum="6BC4C2BB66A8B4D2" modified="2025-10-08" version="1">MSLINVTTSDAGKTKLRCFSEDELYKRINKNAISKKTKSSNIKIRKLMSEISNHNVLTLQKESLFTEKRNLVPKKRSPFTTIYRPEKYFDLVSNEISNRKVLEWLKNKQNPIIEKPFNQKLINFANPKNLTPKKLLLLHGPPGSGKTTCAHVIARHCGYSPIEVNASDQRSATDLRKLISTVTQNESINFSENILKTKSILVIDEIDGIGRNTFELKKLVDIFRSEWFKQIKVPVICICNDLYTKPLIRLHDFCNIVEFPPIEAQTILDRLQRICRTEKIDLDPILAKQFGEMADIRFCLNTLQFLADHRANEGRILATVDTFKKLNIGNLDSKLNLIDYLNKVFKTKNVENESFYKHFFRLSANFQEKKLFVADCIFNNYLNFSSSYLSKMASASMDISEIDKIFSNESLALLSAKINNKFNGKSNFRLFIPKKKPKNRLLLVLEQIKNLLTTSDKNCAMFYIPTLADLVISKNISNEKFYQIKNFCNFRIDNFAIKSEISPDILKFTDFSENIGGNNMNEQILIERIKKIDSRRILKPLKIAIKKKRKRFSFLERPAKKIALKTKAIDYFYKEGCTKAVKRKAKILDFFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHA9</accession>
    <name>A0ABV2AHA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000924</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000187">
        <property type="protein sequence ID" value="MES1919050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13966" checksum="7C0748B530C0DFE3" modified="2025-10-08" version="1">MCAISKFFRKLKEEKKMFGLTIRGNKKRFDKQKQFKITSKCLEEIAQFSYSLRFDDEETKNIWQNLFTNRYEVLRQQMGVKMLVDSDQSNNSELSGKKMSGYEELEENYALLTNYSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHB6</accession>
    <name>A0ABV2AHB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000190">
        <property type="protein sequence ID" value="MES1919069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14625" checksum="6D5AC1988508E35B" modified="2025-10-08" version="1">MKLLDYLDNDNFSCLGDINEAISKGSFIFLCEHCTDFKSCKGRQCAKKRKKYQSIKENYIKMAIFKRRRILANPNLLDFLKTGRIPGPPLSFALKPKICKIFDVERDKEMPSLEEIHIFVTSVMTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF3</accession>
    <name>A0ABV2AHF3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000979</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000202">
        <property type="protein sequence ID" value="MES1919115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6639" checksum="A0B464A76A8162A7" modified="2025-10-08" version="1" fragment="single">MDFNKSNPSYYCQLYNSTLQEYEIEKSKCKKQIEIRTKLSNKTEIARKELISVTSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF9</accession>
    <name>A0ABV2AHF9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protease Do-like PDZ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000978</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S1C family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000202">
        <property type="protein sequence ID" value="MES1919114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041517">
        <property type="entry name" value="DEGP_PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046449">
        <property type="entry name" value="DEGP_PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45980">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45980:SF9">
        <property type="entry name" value="PROTEASE DO-LIKE 10, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17815">
        <property type="entry name" value="PDZ_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13365">
        <property type="entry name" value="Trypsin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="Trypsin-like serine proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Protease Do-like PDZ" evidence="5">
        <location>
            <begin position="462"/>
            <end position="573"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="637" mass="72149" checksum="F808AAE74D42FA54" modified="2025-10-08" version="1">MHTYFYNTSSKFRSQNGENDNKILKNEHLKNKQPDFTISKKNEHLKNTKMNKAPALKPPIDKLIEKSDVHVPKKTESTKCVMRKSYMPPSDLIVRVDCPILVTAPEGQVWEKKIEGKKISTGFAVKLPNHELIIVMNAHGVKDCITRDNGEKIVAVMTHEDEKFDGKVVMENDYIDIAFVRPVALEDKSILRILNKIKDVAVPLDSLRIPSIRDIKFPKIGMPVTIKGYSCGQKQLTVTHGNITSISDNIYVHKDYFGITISIDATVASGNSGGPVFDEDGIIIGIVFEGYESNYFIIPFVVLEVCICRYINLSGNDTSTFVRMGELETNLTLQGVETEDEASFYHLQPEEKGMRVVKDCRELRADDVIVEVEGLGLNERGVVLVNAFEDNTERVPFDFRALCILLTEMNPNLEFTVVRTEKGITKRFNIKHRCGSTNDLVAKYFNEDNNDYIDILGQTIRPLSLEMFMEDIQTKSFTVDELHALVEGKKRYKNETALVFRVTGNTSNAIKYMPHHNAIIKEINGIEPRNLAEAAIALKQPVQNKKRKFIRIKFANGNLIVLNEDRFEDENAKMALETGMTLQLRCSEFLSRKRCLCNGDLCEFEISKTFVTCAICKKKVAALEFKDNHVTMVSPSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM4</accession>
    <name>A0ABV2AHM4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glycoside hydrolase family 19 catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001029</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000214">
        <property type="protein sequence ID" value="MES1919165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00325">
        <property type="entry name" value="chitinase_GH19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.530.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.20.10">
        <property type="entry name" value="Endochitinase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016283">
        <property type="entry name" value="Glyco_hydro_19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000726">
        <property type="entry name" value="Glyco_hydro_19_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595:SF79">
        <property type="entry name" value="CHITINASE 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595">
        <property type="entry name" value="CHITINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00182">
        <property type="entry name" value="Glyco_hydro_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001060">
        <property type="entry name" value="Endochitinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="Lysozyme-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00774">
        <property type="entry name" value="CHITINASE_19_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0611">Plant defense</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046396394" description="Glycoside hydrolase family 19 catalytic domain-containing protein" evidence="3">
        <location>
            <begin position="18"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 19 catalytic" evidence="4">
        <location>
            <begin position="216"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="308" mass="34830" checksum="7D35DD8E189CE032" modified="2025-10-08" version="1">MIFKILIFLLISNNVNTSSVTDDLVQSIIEEILNQIIADSLSPSETEVTSDSTSGSKNVEDWFKPNEWDVLFPYMDYILCNNSGRFTYDAFITAAKKWRSKGFLNSGDHEKDRRELAAFFGQTSHETTGGGGTWTYDLPGSPSPFEFGYCFWDELNGHLSPYCAVDPTYPCEPGKWYSGRGPLQLSYNYNYGQFGDAIGRPEILKRPELLDEDPSLAFEGAMWFWMTPQYLKPSCHDVIDDIVTTSQTNGKPLGFGLLTVIINGGECHWASGNESEFSSDRIGFYKRYLEYFGVSDSREMGCKDIRPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT9</accession>
    <name>A0ABV2AHT9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001088</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000232">
        <property type="protein sequence ID" value="MES1919228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13408" checksum="B0057C50763D8E3E" modified="2025-10-08" version="1">MFDLVMKLAMCFMGFTSIFIIVVGSVVAATTDKIVRLIVMNLSLISFFGLTNLMVLPNLILTMFSLIPLVKVEMEYFEGYQYAITAYVVCIMASTVLLVDFIAPPLAPEITDEYMEEAEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI53</accession>
    <name>A0ABV2AI53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001207</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000266">
        <property type="protein sequence ID" value="MES1919361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17175" checksum="B95BD2E413BD12A2" modified="2025-10-08" version="1">MANINKVEKKKAESLEHCFQRLLIHERVVWESKMALLRVLIWKTIGGLSRTFISIKRRPFVAAIASSMALLMSPLVLSVSILVSFCALCTSGLLIGLVLLFAPLMALLVVVTAIVLLCSVASASTMLFLMRSIAFLSKKIVRRGEKFGSEIAVVRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI97</accession>
    <name>A0ABV2AI97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Subunit of heteropentameric Replication factor C (RF-C)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RFC2</name>
        <name evidence="3" type="ORF">MHBO_001244</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the activator 1 small subunits family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000280">
        <property type="protein sequence ID" value="MES1919406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00009">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050238">
        <property type="entry name" value="DNA_Rep/Repair_Clamp_Loader"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669">
        <property type="entry name" value="REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669:SF5">
        <property type="entry name" value="REPLICATION FACTOR C SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="2">
        <location>
            <begin position="35"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14053" checksum="601439045F569158" modified="2025-10-08" version="1">MELPWLEKYRPKNLNQIVGNDLVIDRLKSIAETGNMTNLLLSGPPGIGKTTTIICLAKKLLGSDYKKAVLELNASDERGIDVVRNKVKNFAKTKVGLPKGRHKLIILDEADNITSSAQNALRRTMEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG4</accession>
    <name>A0ABV2AIG4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001027</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000214">
        <property type="protein sequence ID" value="MES1919163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039646">
        <property type="entry name" value="ZNHIT2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15555">
        <property type="entry name" value="ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15555:SF0">
        <property type="entry name" value="ZINC FINGER HIT DOMAIN-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20171" checksum="D5681D59543BBCAC" modified="2025-10-08" version="1" fragment="single">EISNDIPKLPRLRQIKIDENKNIEPNLLKIILGYAFCSKLYNGDVYQSDFASDFIYISEAHSKISCKNTSEAVSDFINKVKKPPYKQLFLGILTLKDVYLILQEKEIVLRALGQICGILKNARKQFGTFSDKKSAFLSKKKIIYYIEWTRKHKNFKTMAEDIYILFKRMSTNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ7</accession>
    <name>A0ABV2AIQ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000326">
        <property type="protein sequence ID" value="MES1919561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="97" mass="11416" checksum="D7545029135F4CC2" modified="2025-10-08" version="1">MLTGSNTKFFIQRETNLKIKQSPKGLPKFYFNDDPFGLKFLRCFNGFLEYTTENSEIDKKGFRGLMRVSDCENSLCLNVDYSNFLMRVLFVRFAFII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV6</accession>
    <name>A0ABV2AIV6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Calpain catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001402</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000337">
        <property type="protein sequence ID" value="MES1919601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00044">
        <property type="entry name" value="CysPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022684">
        <property type="entry name" value="Calpain_cysteine_protease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000169">
        <property type="entry name" value="Pept_cys_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001300">
        <property type="entry name" value="Peptidase_C2_calpain_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10183">
        <property type="entry name" value="CALPAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10183:SF379">
        <property type="entry name" value="CALPAIN-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00648">
        <property type="entry name" value="Peptidase_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00704">
        <property type="entry name" value="CALPAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00230">
        <property type="entry name" value="CysPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50203">
        <property type="entry name" value="CALPAIN_CAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00139">
        <property type="entry name" value="THIOL_PROTEASE_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0788">Thiol protease</keyword>
    <feature type="domain" description="Calpain catalytic" evidence="6">
        <location>
            <begin position="63"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="297"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="495" mass="57075" checksum="7C73A7C60EC41BC5" modified="2025-10-08" version="1" fragment="single">MLKKESNYVLYYGSTGQKLIKTLSVEELIKEKRSNKEDFSLSKFIHNVFNWEYSVLPFEADGKFVDHEFPPKKESIFEDSANRKEQLKWVRAETLSNNGKIFEKIVPEEMKQGYFGNCWFVAAVCCLAEKQELLERIFGENKISPIGKYKLNLFKNGQPVSVKIDSLIPVGDKSNACFGSSSNLNQMWVPLLEKAYSKLNGSYKSLTSGECHEAFFDMTGCPSGLLEAPKIEFQWLQQKFRDGGYLMTAGINSKKPGHGYFKMMSQGLLIDHAYAIIDVREHTETGREPVRLVKLRNPWSRFEWNGDYSDHSSKWDPKLRKDLHLCADDNDGVFWMDFGHFRSIFDTFSFCDSRHEWRSIPKSFSFNLQNERVESPRFSFKVPGKMVLKYLSLHQNDKRIKSSPQNYIDLAGFVLKNGEGYFEDQKCVGLLESNIDRNTFSKFKLQTGEYTFVPYSSGSHFGGQNLRDVTVLLHLTPEKSDKIRLKTENGDLKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ32</accession>
    <name>A0ABV2AJ32_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">tRNA synthetases class I catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001454</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000359">
        <property type="protein sequence ID" value="MES1919663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1910">
        <property type="entry name" value="Cysteine-tRNA ligase, C-terminal anti-codon recognition domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024909">
        <property type="entry name" value="Cys-tRNA/MSH_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032678">
        <property type="entry name" value="tRNA-synt_1_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890:SF3">
        <property type="entry name" value="CYSTEINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890">
        <property type="entry name" value="CYSTEINYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01406">
        <property type="entry name" value="tRNA-synt_1e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="tRNA synthetases class I catalytic" evidence="8">
        <location>
            <begin position="1"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="221"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="387" mass="45091" checksum="086AF9DA75D7C3D8" modified="2025-10-08" version="1">MASEILGNRFDIHSGGEDLCFPHHDNEIAQAEAFYEKEKVGQWVNYFLHAGHLGIDGLKMAKSLKNFITIRQALKTNSSRQIRICFLLQKWNKKMDYSTKALEEAVAKEKNIFEFLSNAEAFIRDKTNLSEFKQNWESEDRNFNDQILKTQKSVHLSFCDNFDYPKAMHSIFSLIGLTNKYISENPKTAKALLTRKSLFFVERILLILGVLDNKDSYREPKNGEDKMAEKAMTNLANLRNEIRSICINKNGDVGLELRNFRNRTIEIFDKFLNNGRLFDSEINFLNGKNECEKPLLKMKEMCFDSTNRKIFEISQDFEDQISGEKERNFKNLFRIIDKVRDGPLIKLGIKLEDSLIDGKQKCVWKRMNKDILINQINQKKKSGKNNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJD6</accession>
    <name>A0ABV2AJD6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidase S1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005295</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000398">
        <property type="protein sequence ID" value="MES1919781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="entry name" value="Trypsin-like serine proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001254">
        <property type="entry name" value="Trypsin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033116">
        <property type="entry name" value="TRYPSIN_SER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00089">
        <property type="entry name" value="Trypsin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="Trypsin-like serine proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50240">
        <property type="entry name" value="TRYPSIN_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00135">
        <property type="entry name" value="TRYPSIN_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S1" evidence="2">
        <location>
            <begin position="1"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21009" checksum="816B65ADDBDD731D" modified="2025-10-08" version="1">MVIFQILKDEKSLNFDVSLLQTEKSLNSLEILSLNSKLNYENLKMAGWGSTKTSFMFSEKLKIFDAQIDQICPNLLFSLSCLKIKGDFNPCHGDSGSPIYNSDNQIIGIVSHGFSCDNSSPVVFVKTAEIANFIAENAPTAQWDDFPRDLDCSFDLYWIYACTFLILVVLLLVGLFSFICRAIFTNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ5</accession>
    <name>A0ABV2AJQ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sm domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000436">
        <property type="protein sequence ID" value="MES1919894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sm" evidence="1">
        <location>
            <begin position="19"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10419" checksum="8028E56E989C15B1" modified="2025-10-08" version="1">MAETKKLDENSKLSLTEEINSFLGKTAKIRMADQRVLTGKIFCIDGFGNIILTNAIQSKKSSISNKITYKSQRISKLYANIDKMTKIEIKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS0</accession>
    <name>A0ABV2AJS0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CTP synthase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000307">
        <property type="protein sequence ID" value="MES1919492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004468">
        <property type="entry name" value="CTP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017456">
        <property type="entry name" value="CTP_synthase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11550">
        <property type="entry name" value="CTP SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11550:SF0">
        <property type="entry name" value="CTP SYNTHASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06418">
        <property type="entry name" value="CTP_synth_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CTP synthase N-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="23948" checksum="6150655E17811B3B" modified="2025-10-08" version="1">MPKIILITGGVVSSVGKGIITSSLGYLLRTFGVNITCIKIDPYLNIDAGTMSPFEHGEVFVLQDGGEVDLDLGNYERFLDLVLTKDNNITTGKIFDLILQKERQGHFLGKTVQIVPHVTGMIKEWILRVARIPTDGTDKVPDVCLIELGGTPGDIESMTFYESLRQLRFELGTDQFLHIHATFVPELSLSGEQKSKPAQQHLVELRKAGFAEFAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK06</accession>
    <name>A0ABV2AK06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HECT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001735</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000475">
        <property type="protein sequence ID" value="MES1920005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2160.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043366">
        <property type="entry name" value="HECTD4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46435">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46435:SF1">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00632">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="HECT" evidence="3">
        <location>
            <begin position="498"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="709"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="709" mass="81945" checksum="1481BD636953C9BF" modified="2025-10-08" version="1" fragment="single">MHWYLALSGFEIYGQLTGKDLEIMQKPQETNRMAFVELSFNNETKRKQLEERLLSIDFRKVLSDIYGKPIEVAPTYPEIMNEKDDFENNFMRLKLLEMSGAPKKRFFGAIFSIFVGKDFGSENDENGAFFGKLWLEIERFGRKVEKQNVELEKNKLEEESKNVYEYFREQFNNSSPQVKISLCQMIVESLSFKIDQKNNLKTVKKRKRNNSDEKKLKTNEKAVKKILPFWEFVSSDNWILPQKSKINLGEVLSIFSSHPLPDEDRFTSFVASLSSLCDENGDFEIVLLIAEICKFSSENPIDIINWLKSMQIDLNFDSDILCSADNLSELLENEQIQNIGDGFIEFSELISEARGEFSPLFLNPSQISVEKEITTKMKQPILRKLGQIESKLIRLQFVLLKIFNKLLADSLQFINLHRDKEKTSLAGMIALCKRYVFKVVKIDFIDSVMSLTAIAQTNLPVVSINRLAIAEKSNSDTEINFSRDTHFGIAMRQLGDVKESHLRPQKPQGTEPYIAFEVSYKDQHVVGTAGPYRQFFSEISEELISKECNAFVPIDKLENRAKMLFVVNPDATSPADCKMFEMIGVFTGCCIRTEAKLSLNLADIFWKLLCGDTIELKDLIHVDSQLYLRLKSSKESKKDEFEKEELTNLLAEHRIEYSSEVTYENRREIISLIVSALLRRTKRQMRFVSRGIEKVVPIQILRILTWEEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK17</accession>
    <name>A0ABV2AK17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001579</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000408">
        <property type="protein sequence ID" value="MES1919814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="484"/>
            <end position="550"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="561" mass="63491" checksum="125BA8893FFDB01C" modified="2025-10-08" version="1">MDVDTENADLFPQLQFNTNGIISVNFYNHAIGWDGRQAELESIIRRHLDRENIDNNVSILHMEALEKRLYGVLGVLRNAVCYPAPETVYPSDAEGLISLIINFAKFMPKDVIELSNEVYEMVHTIEKLELTASCLSASHDYAKYFFGDVLKLAGVNIDRVLAVFATCITRLNLANRQILIASFKAGFSNKQIRDTMVTVISSEVTYNVVYETEQCSGKIYDVIKTMPLPIAQYILYLQSGKPVDIQTTEGMEFNLIGADIATSECASQCMKAYTALVGLRGFYNSEIATDAPQENYVNTEGLYTYTMRLNNLINQILHDAQTQTIIPMCEKEDIRTIGSVLGCETLNVKSEADIVQSIRDFGATILNRSVEEDIHFNLFQTVNNELQRRDSLIHTSKQDFDALKHTYDDTELAHQQKSEIISRCVEKLNKTLSNNDARPNGRQASETNIECIVNRACEEIHSLYTTNVRLKNTASHQTDRADAADATNGNLQKIKTKNKNLQQQFKTLQKQSKTSIDQLTTELEDSKGEFNRLSDTMRTLHHELDRLRTELRLKDESIVAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK67</accession>
    <name>A0ABV2AK67_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">C3HC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001536</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000391">
        <property type="protein sequence ID" value="MES1919763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012935">
        <property type="entry name" value="NuBaID_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15835">
        <property type="entry name" value="NUCLEAR-INTERACTING PARTNER OF ALK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15835:SF6">
        <property type="entry name" value="ZINC FINGER C3HC-TYPE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07967">
        <property type="entry name" value="zf-C3HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C3HC-type" evidence="4">
        <location>
            <begin position="22"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="245"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="331" mass="38861" checksum="1243B111C70CDF62" modified="2025-10-08" version="1">MLRHYLALKGTADPVEGALQFFEDRLSSFRRNDWEFREPPLDPFSCACEGWTAISKNKIQCGFCSETILCYVPTNAAKNSVAKITEFLHNKIVRNHKTDCDWFIERDEDFLGNYFLLLFGTHFVVSLENRLQKWLKYPELQIKSRIKFCNNLSKFVANLKFLSLLDGILTTVPRIMSFCGWEIMRTENDFKAECSYCFKSQKFTVEKLRRYFMADKQIDSNEQRFFAKSKYFGFSKFESKSSFAPNKNSRFVPKPKWQPSAPNENRRTRKPQNETVQNFDPILSHFKFCPLFYINSNNKNGLSIFLNGLINDANRNKKTLREISELFGEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB8</accession>
    <name>A0ABV2AKB8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001486</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000371">
        <property type="protein sequence ID" value="MES1919702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="210"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="374" mass="45207" checksum="9B75EA642D75DFEF" modified="2025-10-08" version="1">MGKSINDFEKLHEKVLQRIQLVKYANDQISQTIDKSFSRNKENNIENENFFCSKKWSENWPENCSSLFFIDQMIVFDLNFSDTILLFQNISLLLQPQKVDFRRTKWTTGKLSDLSDIETINFNATYFYNFDKIGFVHYGRYRFELLQKIFKYFFTALFIKCALSKMYLLFYGVSKIEDNVELSIEETKHKRTIAEMNLFFRYISRIRKKILFLVRLILLCCLIWMQRNLYLYFTEDNDFQKMGVDLFSKFISGPSYLNEIQHTENELNQFFDEMNKDKIKRFINSVQDFNDKEKRFIDNLNAKKCFWFRYQNTKCFTSDIFSNNFETFSECNRNCEELVVEGKLINEKELEKIKTIFPPKRFNFAENLTFLIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKM8</accession>
    <name>A0ABV2AKM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001929</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000565">
        <property type="protein sequence ID" value="MES1920238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051409">
        <property type="entry name" value="Atypical_kinase_ADCK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851:SF3">
        <property type="entry name" value="COENZYME Q8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8139" checksum="0C47524464DE60D9" modified="2025-10-08" version="1">MVSDLKAYGTEILSDRLTPPPTEAYTLHRKLSGCYLTCFKLKAIVRCKQIFETRLKNYDWKNVIKDSVIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR9</accession>
    <name>A0ABV2AKR9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">S1-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001950</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the eIF-1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000575">
        <property type="protein sequence ID" value="MES1920260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05793">
        <property type="entry name" value="S1_IF1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00216">
        <property type="entry name" value="aIF_1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001253">
        <property type="entry name" value="TIF_eIF-1A"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00523">
        <property type="entry name" value="eIF-1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21668">
        <property type="entry name" value="EIF-1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01176">
        <property type="entry name" value="eIF-1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00652">
        <property type="entry name" value="eIF1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1-like" evidence="4">
        <location>
            <begin position="21"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="124"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="128"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16729" checksum="3C38040EF8D9A7F6" modified="2025-10-08" version="1">MPKNKAKGGKRRRKGKNMNDFKRDLVLKEPQQEYAQVVQMLGNGRLSAYCFDGKTRLCTIRGKMRKKVWVNQSDIVLIGLRDFQDEKGDVILKYTAEESRKLQKLKQIPSNIVIGQADAIAEKKDLEQETVEPESDDEEINFEEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKZ8</accession>
    <name>A0ABV2AKZ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Hyaluronan/mRNA-binding protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001844</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000523">
        <property type="protein sequence ID" value="MES1920129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="68" mass="7540" checksum="6C5D5EC4C7A97F3A" modified="2025-10-08" version="1">MPVHESRRPKTNAELNKEKHVPRTGYPGNAKKDGAGGKFTWGDIMDDTAAPIAIDKNDPNYDSQEEND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL58</accession>
    <name>A0ABV2AL58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Mitochondrial import inner membrane translocase subunit TIM22</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">TIM22</name>
        <name evidence="9" type="ORF">MHBO_002094</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Essential core component of the TIM22 complex, a complex that mediates the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. In the TIM22 complex, it constitutes the voltage-activated and signal-gated channel. Forms a twin-pore translocase that uses the membrane potential as external driving force in 2 voltage-dependent steps.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Component of the TIM22 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Mitochondrion inner membrane</location>
            <topology evidence="1 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the Tim17/Tim22/Tim23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000664">
        <property type="protein sequence ID" value="MES1920426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039175">
        <property type="entry name" value="TIM22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14110">
        <property type="entry name" value="MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14110:SF0">
        <property type="entry name" value="MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02466">
        <property type="entry name" value="Tim17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4 8" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0811">Translocation</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="53"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="154"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU367038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20496" checksum="4D01071E88543622" modified="2025-10-08" version="1">MDWSKMFKPEPKLGISYLPVKTQLRQQIFFETRGITLYWPYLYNPMETIPVKAITGLFIGGITGIVFGIFMSAFTTAPFDYSDKFNKLPFKEQMKISWKSNAKRSVAMGKSFSIVMALYNSSLTFLSRRTAREDIWAKTKAGFVTGSLFNIRRGAFKMALGGTGFAIFNYLFEKYLETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK2</accession>
    <name>A0ABV2ALK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PUM-HD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002210</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000730">
        <property type="protein sequence ID" value="MES1920548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033133">
        <property type="entry name" value="PUM-HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001313">
        <property type="entry name" value="Pumilio_RNA-bd_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537:SF13">
        <property type="entry name" value="PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537">
        <property type="entry name" value="RNA BINDING PROTEIN PUMILIO-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00806">
        <property type="entry name" value="PUF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50302">
        <property type="entry name" value="PUM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50303">
        <property type="entry name" value="PUM_HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="PUM-HD" evidence="4">
        <location>
            <begin position="483"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="541"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="372"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="434"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="372"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="434"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="630"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="630" mass="71415" checksum="E3BCB4B271D066BC" modified="2025-10-08" version="1" fragment="single">SKNAKEKKVKNKNDQLLRESLLSRFSDTYDIDIIELDNNKTDEKYLQVLDEEGCPLCLYGKEKIFLNNRCVLFLCKLSDCFHVFHENCININLESLIRSSTSFSIKKFHSLSFLSVLPFSLPNSETDQTPRHVNTYLISVEMSHLISNSTSLKIDWPEPINSFIDPVSQKEFLMLSLEKISRNIDENEMSENLPMFRAKRGKIKFCCSLVDSDKTWIHEGNYDLYPNKEHFVLAHEDKETQNKLSLGLKKERLSEEITAFSMLFVHYEIGNNPLGTPMLHLNTGLTPIFVPSVAPSPFKELSPFFVQNENSPKFNGVQALYKMEDGSPVLECLEKNGHISTSKIEHNGQMFDFTPIASPINTFTLPVSHNKSVLSTPTEKNPFSPNSQKSKKTITDTKISYIPALAPREYSEANIGESIICKKLKRADKLRRMEKEEKTGVLDKSEKMFSYRENSDNSSSEIDKNRQKERPSGRRSNKEKNTSASSLLYNISIGAPTEKTPSQIIKSLSKQIFLLSKSQYGSRFIQDNMDNAEHFSLFYKQLKPRVADLMVDNFGHYAFEALFAACDAERKTELLTEIAQQICLIGCHKQGSFSLQSVMENVSAPGDVTILSGALSQNVKAICVSCSGHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT0</accession>
    <name>A0ABV2ALT0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002274</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000771">
        <property type="protein sequence ID" value="MES1920620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167">
        <property type="entry name" value="OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167:SF24">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE CHK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="40"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="366" mass="42930" checksum="E9AF0FF563E379E0" modified="2025-10-08" version="1">MDSEETLVEILDIPERILNETKCSFSTKYHKDCTATLSDFEVEDLIDVCKSGRVKIFHGYFFIPNFPTMRFFRRRKIKIWYRYFVKKIIIMDTKVINRSNKHFALKVVKKDPAFYQGIELEIFKILDNAGPNRGIVKCEHQMETDEYTFIFEEYLLCDCDDLVSKMSLRIARVFIERLVDALKFLHENNIAYLDLKPANIMVDFDGNIKLIDFDSSEFLDSNLIRDTMGSLKYMAPEQVKGEFSDRSDWFSVGNMLSKILTKKSANEKLFEKNKDSNNEEKLMSLTIVRRYKTGTKKDENHIAAAKFIDSCLEVDPTKRIDLDAHKDCSDVEFLKDKSEGDDEEFEDFMKGYVDCILCRKTYLMVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM86</accession>
    <name>A0ABV2AM86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002376</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000833">
        <property type="protein sequence ID" value="MES1920735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="298" mass="35200" checksum="D3B1394E9EBC7B75" modified="2025-10-08" version="1">MSSVEMTEFIEDDCDKVSKRMPFSFNKSKTHIEYSERDKVTAEKIAEVSKSLPFIFQLGEETYCEDSKCFKRKTNMNLCNDSFQKRKFDLIYYDQCRVLKQIIIMSNFLVHASIYLTNEIDYERTVNFDSSGTVVFNLVQCEYVAEPNEETLERHCIFLLRSINTVFFGKMTFIVGDALERIRHSLLEGSYLVGFFIFGPNSDASEFMFCLNLENTFYVFDNTFNPFSMSNIEDKEHLVGPINGKFLIKACVFRKNSPAMFDFMGRNNISFTQKFDDWKFSYILYQKQYIEQRFYLTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM87</accession>
    <name>A0ABV2AM87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="3">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002273</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PP2C family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000770">
        <property type="protein sequence ID" value="MES1920619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832:SF803">
        <property type="entry name" value="PROTEIN PHOSPHATASE 1G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0464">Manganese</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="11">
        <location>
            <begin position="38"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="26952" checksum="A25D75BAA3A8B156" modified="2025-10-08" version="1">MPAIITLLGILISSSVAFYFILTRNAFYKHKISSFGSITGIASMRGRRSTMEDDHFSGEFKHGEQSIFVAGVLDGHGGISTAKFVSGRFVQEFKKELSNCNSIKEALSSTFHNLDERFLEIARKRKLRDGTTLLVSVVAEKTLYIANTGDSRAVLVKKGGASEPLSNDHKAGKFDEFKRISSLGGRVSYSFGTWRIEGKLAVSRALGDIEFKKYAICDPEIKSIDLKKGFRVIKRGLVFDSRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM92</accession>
    <name>A0ABV2AM92_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002396</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000847">
        <property type="protein sequence ID" value="MES1920757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="161" mass="18115" checksum="2936596DBA3174BE" modified="2025-10-08" version="1">MELGCDSPNHTFTFAVSIETCTLENTRIFDKVLSVGQKCVKNENNKTITVKGECDFETEETYYYVDPNNKRLSIFQVNCDSIETLKPADFVNATCDYVRPQNGRFVNETCVVDGKISGEGCLISCDDGFDLMSDGVLSRRTVVKCKRDVLQPKPVCKPIRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG5</accession>
    <name>A0ABV2AMG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002471</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000905">
        <property type="protein sequence ID" value="MES1920845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12726" checksum="F4DFFF05858F1E7B" modified="2025-10-08" version="1">MKKEVLFWGRVSDPATIIKNRLPFNSHHSFVEAIFVDKTEKDKICENFLQKCKTANLKILVDVEMTNYQNLQENMSAHMYIETEKSRLHVSEMPRDFSRGVIFIRFDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK9</accession>
    <name>A0ABV2AMK9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH CENPB-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002499</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000928">
        <property type="protein sequence ID" value="MES1920883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006600">
        <property type="entry name" value="HTH_CenpB_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="SMART" id="SM00674">
        <property type="entry name" value="CENPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="TrpR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH CENPB-type" evidence="2">
        <location>
            <begin position="101"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00674"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="302" mass="34499" checksum="DB71B690C79A8C96" modified="2025-10-08" version="1">MVSKISKLTKSDIYAELQKRQLSQREIAAKFQVSRMTVFRINRQLRLATGMKKYTVKRVAAWPPRKKALPKNKDGRCSSNGVIKMAIPPPPPPKNAGRKTIKQYETLDFLVHRCFLRASPFVRIDTKVLKKLSLAVGQRLELARFKASNNWIANFKKRFGIRLRDLNRAGRTKAERADSPTWEGLSPDEVVDKSVDNVFREFGLGRGAASLIKMEKLRQTAPGLVKRESGIVVKNEKGRLPFESQYGKQNGGPRRKFRRASQSLEEMFKDFEQAVASSAPALVKRFAKFRRDVYSVVEQFDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMP0</accession>
    <name>A0ABV2AMP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002547</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000971">
        <property type="protein sequence ID" value="MES1920942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="254" mass="29180" checksum="31E45A7E4B3109C7" modified="2025-10-08" version="1">MLTTISTNGNHDCPMQFTTSNTNSGLHFVIHKSVLPITARVCIDMGDVDDNYSLELRLFYLLENNSRKLILAASAATENNLNLNPAFEFDFPAFMVLKPGKYCWEILQSPLYTIFIGASENRIEAGGIVETPGKKINSPLEIEFSAPSFTFAFEANTMESLYAGFAYFELTELKVCSMINTDLSEYEDFARERNMRDFYRKIQNLRFDLNRFAVSLRQMCMFLVRREFMVIKGFLRKPVETKKIVETPKKSENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN22</accession>
    <name>A0ABV2AN22_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002661</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001061">
        <property type="protein sequence ID" value="MES1921064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="251"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="5"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="253"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="390" mass="44985" checksum="D8FFFBB0FCFD098E" modified="2025-10-08" version="1">MSSQILEIENQLQKEQNLNKKLENNSEKLKNEFKMQIGNVLEDRKIETVRIERKMEKLSEENGDLKSEVVSFKAKMANLQENRNGDIEFLRNSEQELKILNLKLKEQIEKNDKLENEKNDLVKEVAKLNKNEEKVKIAKINENAKFKDAFKNHFSVKILDITKIIDKIEKTIEKLTEPILKKSSSLPILPTNKTKNGTKTDLPKTQNLTKNRLSNWINNLLKNKKKRYVVNLNDHSSGDFIFNEKTGKWINNNDKDDNKTEKTPTLPPKRKKTPQKIQSRVVSDTNALSRYASNNSFFGYGDSEMNEKEKNGEKSVGNAAKHLNELRSEIKNFERMLCAEDKNGFSALNSAVLKVTKESNKGQKTVENVIEIQKGFCSIIGFKEERAKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN93</accession>
    <name>A0ABV2AN93_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001103">
        <property type="protein sequence ID" value="MES1921135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="31875" checksum="1E5E96131112FD1E" modified="2025-10-08" version="1">MEIQKHAIIETNPKAFTKLRTHIFEDFEPSPSLSRNLRRFNVAISASAPSDNFKRMFNNERIRAYFHPSISTVSKFSSFSFYYGISQTFEISNIVNSSFSKNKNENNYFYGDDDKFVDMLGDVDNFRIENLGYQVAFLLARENNKFLHFKADLSSLELALTSLKYKYKDLEMRGGFKFSKRESGVNYYCGFSVEKNRGSKPYFSCSVALDGTIDTYFYVTLLDSLKINKFDNKLKLALTSRLKPNRTNPICNVGASLNWGFFTGGLHNKGINVMGIDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN96</accession>
    <name>A0ABV2AN96_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000996">
        <property type="protein sequence ID" value="MES1920979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="26"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="98" mass="11983" checksum="A0C87312D1B0D927" modified="2025-10-08" version="1">MKKTKSVEISLPPSIFEKRMKYRIAFKKHTKKINNERDELQKELEDLELEHNKLKTEYKNLVMQRANNNLVFEENCERLKRDFFLKKQKGFGDFEFQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANA0</accession>
    <name>A0ABV2ANA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002532</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000958">
        <property type="protein sequence ID" value="MES1920924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050145">
        <property type="entry name" value="Centrin_CML-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23050">
        <property type="entry name" value="CALCIUM BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="49"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13521" checksum="F90D8D84AFA49B92" modified="2025-10-08" version="1">MSNKELLEFSKVYIKNMGDKIDPKVAKQVLKMEVGQFTELKNMTETNLRAMKVVEEAFAVLDKSGSGYITKKDLHTGLNALGIAVTEEESDRIVKEFSRNENRGISYDEFVLMAHKGFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANF2</accession>
    <name>A0ABV2ANF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">WD repeat-containing protein 53</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">WDR53</name>
        <name evidence="5" type="ORF">MHBO_002762</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the WD repeat THOC6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001142">
        <property type="protein sequence ID" value="MES1921195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042626">
        <property type="entry name" value="THOC6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44411">
        <property type="entry name" value="THO COMPLEX SUBUNIT 6 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44411:SF1">
        <property type="entry name" value="THO COMPLEX SUBUNIT 6 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="160"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="40065" checksum="7678FA478C8A3628" modified="2025-10-08" version="1">MFKAHYKNLNAINYSNQNTVFCICTVTLNKKKFLIFGGDRKESEIQIFSLSKNDDDLTMQRILKISVNETVRCLTVSTQLNSLFAGTDKSLLIFDLKAMAKSLNENQKNSIRPIKTIDIFQPFEINDFALNENEHLMYIADGSNAIKIYDLNENRIIHSLTGHFNYILQLKYFVHENSSVLVSGSLDGLLKFWDTKSKKNIFGIDSASGVVTDTPSFESEILALDIDNNGEYVAISSTNSTIQLYHTKTRVLVKANYLKNLITSLKFIDSNIILGTEKGEIYYWKMVETDLMKIYDCKDADAIYKFVECDEKRFENESKMAKSVVCCGSGRFATILTFKENFLVSSQTINIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN7</accession>
    <name>A0ABV2ANN7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002812</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001198">
        <property type="protein sequence ID" value="MES1921258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24121:SF21">
        <property type="entry name" value="ANKYRIN REPEAT FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24121">
        <property type="entry name" value="NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="322" mass="36411" checksum="9AC3A2C32BCF5672" modified="2025-10-08" version="1" fragment="single">NNICESLSQAEIDEIYDVNGETNTHEGIPTQIQWSLTLACGAQNNNVVQYLLTVGGIADITSCFYAVKGGNFHTIRILVQHGADLQERRKSLSKWDTITSVLEEAALQKQEHLLLPLLQCCPDLKYIRSSIGASAVHFAASAGNVQVLEDLIKSSSFTPYEKTNIGSTILHFASQNNRFDAVKHIVKKYEDLFKDEFYCYAQGTILHTAAQSGNFELFKYLFDKNVEYLDKCRQNNVILSRGCYVRVNGKKCSVVAKEYLLNVEDESGISLLQRAVETGNKKLSNFILDNRVCDITHDTLHYSLWDIAYRDDYRSKWKCPTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANU7</accession>
    <name>A0ABV2ANU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002886</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001267">
        <property type="protein sequence ID" value="MES1921351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100">
        <property type="entry name" value="IMP2'P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100:SF4">
        <property type="entry name" value="USPA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="6835" checksum="8CF8F1251018ABFC" modified="2025-10-08" version="1">MPKGNPALSIVEMSKNEKVDCVIMGTRGKGCFGRMLSGSVSTYVMQNASCPVIVVRARKEDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP17</accession>
    <name>A0ABV2AP17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001339">
        <property type="protein sequence ID" value="MES1921422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046082410" evidence="1">
        <location>
            <begin position="22"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11354" checksum="ECB5F4E25F6F5D98" modified="2025-10-08" version="1">MTIFRILSVLLMANLVDLTATTKNIKGNEKTEILAIKVDFNVDYCFYKADPQNTFEKDIEEMVDEINFKLLNDYEIMILPQITKSDFVFNEPCFNIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP70</accession>
    <name>A0ABV2AP70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001384">
        <property type="protein sequence ID" value="MES1921475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="331" mass="37119" checksum="B77C51DA6237D918" modified="2025-10-08" version="1">MRFKFGNTLTTTVTLDISNSRQMCQHVYKSCKYSNQLLPASSCTTDNPSLFYDQCSFGIKSPNAFNVDGKFELQSTWICGQNGIIKTSYKYSAGCPDGFLQTKHLNANKGCERLIANFLFGKCDLSRDNAKFQNPTLPKLLQDTFPYVCNNGQDNSNKLVVVIGCLRYQTTFANALTPDKTCVASKSHFFRKCDFHVAENYRWVNPQNKLLSLITSDCDDDGKRSPEKVLLVKGCPKPTSVTPTRYSLDHKCTTTNSLYFESCLAIAMPRWLFTVNSSFQDEVCIGCDNGKSNVTRLDLIPCNLFLNISLSASKVCFKSRSCATKRSLHKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK9</accession>
    <name>A0ABV2APK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Malignant T-cell-amplified sequence 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MCTS1</name>
        <name evidence="2" type="ORF">MHBO_003133</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001537">
        <property type="protein sequence ID" value="MES1921603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.400.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016437">
        <property type="entry name" value="MCT-1/Tma20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048248">
        <property type="entry name" value="PUA_eIF2d-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004521">
        <property type="entry name" value="Uncharacterised_CHP00451"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00451">
        <property type="entry name" value="unchar_dom_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22798:SF0">
        <property type="entry name" value="MALIGNANT T-CELL-AMPLIFIED SEQUENCE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22798">
        <property type="entry name" value="MCT-1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26292">
        <property type="entry name" value="PUA_elF2D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50890">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PUA" evidence="1">
        <location>
            <begin position="2"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="9830" checksum="706E4CBD8B36E4B0" modified="2025-10-08" version="1">MPALKVDEGAIKHVLRGSDIMTPGLTNEGGEIAVDLEENKYCVVNAEGKEHAAAVGMTLMSTEQMRKDGKGRAIKSLHHLGDSLWELDLSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ0</accession>
    <name>A0ABV2APQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003191</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001603">
        <property type="protein sequence ID" value="MES1921662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12681:SF0">
        <property type="entry name" value="ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12681">
        <property type="entry name" value="ZINC FINGER-CONTAINING PROTEIN P48ZNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="100"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="150"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="100"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="150"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="14"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="310" mass="36462" checksum="7B8250E124CDB3DC" modified="2025-10-08" version="1">MPKKKKNAQKKGKEKTPKMPEKPKIDKTFGMKNKKGKKAATFIKNIKGSQNNSQQYKEEQERKREIDRQKSREQERLKKIELEKKEAEQKAAQELIEKEAKKKILCSLFVKGDCRSGAECDYLHDWSKIDKTEKIDPYTDPRIDTQFYPSDKAMMCRHFLESLKQKKYGFFWVCPNKGQKCQYKHFLPRGYMLPSDKKASMDDGGDRETIEDIVDMQRNELLETMVEPTKITLSVLLEWQKDNAKSDLTSRRKKLENEKKSELSGKEYFLDDKNRVDESIDDFVDLEKSVKNKSLFLDESLVSELDKLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS6</accession>
    <name>A0ABV2APS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">DNA repair protein rad50, variant 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">RAD50_2</name>
        <name evidence="12" type="ORF">MHBO_002996</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the SMC family. RAD50 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001374">
        <property type="protein sequence ID" value="MES1921464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038729">
        <property type="entry name" value="Rad50/SbcC_AAA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18867:SF12">
        <property type="entry name" value="DNA REPAIR PROTEIN RAD50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18867">
        <property type="entry name" value="RAD50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13476">
        <property type="entry name" value="AAA_23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0158">Chromosome</keyword>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Rad50/SbcC-type AAA" evidence="11">
        <location>
            <begin position="6"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="213"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF13476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="332" mass="37953" checksum="BD7821194B47D950" modified="2025-10-08" version="1">MTTIKKLSISGIRSYDPNTPVTIEFQRPLTLFTGNNGSGKTTIIEALRFACTGINPPDSLKGKSFVHDPLLSKECLVRAQIKLTLKTFDGKPVTIIRSFQVSQKAKTRRYQQIDATIRSINEEGERVTATHKCLEIDNIAARIMKVSKAILSNVIFCHQEESLWPMGDSKSLKLKFDDIFSSTKYTKALQKIKTVRKNLKTKTAFLEKDLLLAKNNLQSYKKYKNDLENLTKEIVILNETSSKLSKDINVEENNLERLEENVESVKETQNEIERLNFRISALLKEKKILELSIIEILDKSDEDIKNDLDICLKQSKVLVAKLGFHFEIFRKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA8</accession>
    <name>A0ABV2AQA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001848">
        <property type="protein sequence ID" value="MES1921844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15525" checksum="1BE87AF4072530E6" modified="2025-10-08" version="1" fragment="single">FQYLKTDSKTASELRDDKKSTKKGIGAFLKKLRKNKTDDKKQNKIREPDKLTKPKAGILKTGDQEVRKPIYVNTVPHVKFQDSVVENKETGDSSWIPDLKKNPLYVSANGTEFANSKEENLYDEIPEEPFYGNVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ8</accession>
    <name>A0ABV2AQQ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003517</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002042">
        <property type="protein sequence ID" value="MES1921994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.340">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13618" checksum="BD6019E28D925B99" modified="2025-10-08" version="1">MIQIKNELQEIRKRLDKVEKNRTDIKELKKRINDLERKKIQHEEEIAKLKKCLSDRDQEQRKDLEKKDKMIKEMSEEIVELKHQLESKTNHIENLESEILDLQRRLDEETQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR02</accession>
    <name>A0ABV2AR02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002158">
        <property type="protein sequence ID" value="MES1922062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036345">
        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="Ribonuclease PH domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="7811" checksum="3736B86D125C8FE2" modified="2025-10-08" version="1">MNYNGPFLTIAVLAKSQEIISCELTRTLNLEILEKMVETGLIGVKLIYNKLLESVRANATQKNEQIFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR88</accession>
    <name>A0ABV2AR88_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003701</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002364">
        <property type="protein sequence ID" value="MES1922186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045137">
        <property type="entry name" value="RBM26/27"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14398">
        <property type="entry name" value="RNA RECOGNITION RRM/RNP DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14398:SF0">
        <property type="entry name" value="ZINC FINGER PROTEIN SWM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="63"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="272"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="38727" checksum="9F842CF53E9441E0" modified="2025-10-08" version="1">MSFSNDDLENDQLAKNNPNKQNENKKTKRKRTTEKPKFVKRKNIETKNDKKYFKRPRKLKKLRTIYINDIPQQKLNFADIISFFDKFGEITSVQINKQKSQVFVKYEKQNEAELAMKEAFPVFGDESIRLRWAFFEKQEMSVLENTQEYLFCISKCKERLKTIFGQLENCQKLTKLAKNALKSKNDFGRPENTKILTKLKTLKKSLRGKIENFCRNFPVLDKSNLTFETKPDFWIKIDNNCDLLFDLIAKKFGIEQLYKSDHSVFSVDLRPKILQISNLPKEYLNLNFIKGHFYKYGYITKTEIKNGEMFIEFAKSHMAENVIKFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF3</accession>
    <name>A0ABV2ARF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA topoisomerase</fullName>
            <ecNumber evidence="1">5.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TOP3A</name>
        <name evidence="3" type="ORF">MHBO_003507</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the type IA topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002022">
        <property type="protein sequence ID" value="MES1921983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003917">
        <property type="term" value="F:DNA topoisomerase type I (single strand cut, ATP-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000380">
        <property type="entry name" value="Topo_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023405">
        <property type="entry name" value="Topo_IA_core_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390:SF21">
        <property type="entry name" value="DNA TOPOISOMERASE 3-ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390">
        <property type="entry name" value="PROKARYOTIC DNA TOPOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01751">
        <property type="entry name" value="Toprim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56712">
        <property type="entry name" value="Prokaryotic type I DNA topoisomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Toprim" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU362092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8581" checksum="8B4516858FB9CFEE" modified="2025-10-08" version="1" fragment="single">DKKQIARTLKEEAKNCQKLILWLDCDREGENIAFEVIDICLAANPKLNIKRAKFSALIPRYPRIQFITIKYLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ7</accession>
    <name>A0ABV2ARJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003805</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002538">
        <property type="protein sequence ID" value="MES1922296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20752" checksum="8D80F3F9179C84AF" modified="2025-10-08" version="1">MSKTFKNNKELLKSGNLEKFLQIFDEKTDFLVTKKINSIYNELKFETSNLWENRCANTKCLKTSKFQSFCDKCGNAQTLQKIKSEQKEIGLNFNFSQNEKIKMIEKSFDIILEMTRKQKSKNKIRRNGGDIVFLLRNVLINASAKIKKTTKLAFDEIMKKIRKVTKLHDNSNPSVIKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL1</accession>
    <name>A0ABV2ARL1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003559</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002135">
        <property type="protein sequence ID" value="MES1922043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6594" checksum="B98BEBA8EFCE3367" modified="2025-10-08" version="1">MAAYANQMAAYGYQNFNVPIQNQQNLYANYGFGQNGQIQQMMQNRAPHPPPPQQPPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL6</accession>
    <name>A0ABV2ARL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003812</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002556">
        <property type="protein sequence ID" value="MES1922305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="14451" checksum="9284260B9828C147" modified="2025-10-08" version="1" fragment="single">LKLSRESSLIIDGKKVEARKFTNLRLKNKICNYYSETKKISFDNNNFPFIPPVSFPQNFNVLRQSPYRNYRYYQDLNKICNNEVNLDNYYKKFANTKSFVYPNLPKPVVLQFLFHIFNDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU9</accession>
    <name>A0ABV2ARU9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PRA1 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003777</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Membrane</location>
            <topology evidence="1 5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PRA1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002495">
        <property type="protein sequence ID" value="MES1922269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004895">
        <property type="entry name" value="Prenylated_rab_accept_PRA1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03208">
        <property type="entry name" value="PRA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16825" checksum="42CC6E114488878C" modified="2025-10-08" version="1">MFSFTNLNVLFLGIIKNRRGLPFESTKIDMAKLSYQSLLMKLRKWNEFFNEFRSPNYSTVTKRIDSNLAYYSLNYLIFLIFAFVLNGFLAPKMFIWLVLLAAIGAYVFYVQYFGVEVKMGDFTIDKTVLNIIYSIGFIILISLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW1</accession>
    <name>A0ABV2ARW1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003794</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002520">
        <property type="protein sequence ID" value="MES1922284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="46"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="29874" checksum="6D62F8928166CA74" modified="2025-10-08" version="1">MDQIRPDRQTMMFSATFPREIQLLANENLENHIKIIVGRIGAANTNIRQVVEVLLNEDLKMEWLKIRLKKFIDFGPVLIFVSKIKDCEELTSKIRKMKIPCGLIHGDFDQRKREEVLKKFSTGNCKLLVATDVAARGLHIDNLKTVVNFDAPRNLETHINRVGRTGRAGKNGIAYTLLTPNNKKEASFIKANLIQSKQPVNSQLENLIKDKNVSETTNLKKGMQFTKESSNKNFRKRKAVTFEKSSLSKSAFSKGFIKSNGNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS73</accession>
    <name>A0ABV2AS73_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein S15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004034</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003007">
        <property type="protein sequence ID" value="MES1922516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="91" mass="11088" checksum="A0C0CA204A989963" modified="2025-10-08" version="1">MTENSKIIKRYKEKQNRINISFQYEELKNLLHLKKKDKIVILDETIKRITFMKQQKRVYAARRKNYIAKFKYFASLLREQNNENSLTCAQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS80</accession>
    <name>A0ABV2AS80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004046</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003028">
        <property type="protein sequence ID" value="MES1922533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055275">
        <property type="entry name" value="Ferredox_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48467">
        <property type="entry name" value="GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48467:SF1">
        <property type="entry name" value="GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51971">
        <property type="entry name" value="Nucleotide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="9847" checksum="5481AFD8DDBCD0B2" modified="2025-10-08" version="1" fragment="single">MYTAMHLLRKFKFAQITLIDKNPMPFGLARFGVAPDNTDTKRVLNRFNDILLNPNCSFLGNVKFGKDIKIDFLQKYFDAVILAYGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS82</accession>
    <name>A0ABV2AS82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pleiotropic regulator 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003930</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the WD repeat PRL1/PRL2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002763">
        <property type="protein sequence ID" value="MES1922419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045241">
        <property type="entry name" value="Prp46/PLRG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19923:SF0">
        <property type="entry name" value="PLEIOTROPIC REGULATOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19923">
        <property type="entry name" value="WD40 REPEAT PROTEINPRL1/PRL2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="12"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="54"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="96"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="136" mass="15256" checksum="F1038DB67583ADE7" modified="2025-10-08" version="1" fragment="single">WDLASGVLKLTLTGHTTGVRGICVSDRHPYIFSCGDDKSVRCWDFEQNKVIRKYHGHLSGVYGLSLHPTLDVLVSVGRDSCGRVWDVRTKAQIHVLSGHKSTVASVQTQEYEPQVITGSHDHTIRFWDLRNGRSIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA3</accession>
    <name>A0ABV2ASA3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ER lumen protein-retaining receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_003759</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ERD2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002465">
        <property type="protein sequence ID" value="MES1922252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000133">
        <property type="entry name" value="ER_ret_rcpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10585">
        <property type="entry name" value="ER LUMEN PROTEIN RETAINING RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00810">
        <property type="entry name" value="ER_lumen_recept"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00660">
        <property type="entry name" value="ERLUMENR"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00951">
        <property type="entry name" value="ER_LUMEN_RECEPTOR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="62"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="153"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="187"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1922252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="219" mass="25744" checksum="28E7299341203C39" modified="2025-10-08" version="1" fragment="single">MNVFRFLGDMLHLGSVLLILLKILSQKSCRGISLKTQILYAVVFSARYLDILWNFYSIYNSIMKIIFICSSIEIVYLMKYKSPYCKTYDEKNDSFNIWFLVAPSAFLAIICNLSVNIFETFWAFSIFLESVALVPQLIVVYKSAKEQSGRIENLTTHYVVCLGGYRAFYLLNWIYRSITERGYRDYISWFAGIVQTVLYADFFYYYARSKWLGQHMELP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD8</accession>
    <name>A0ABV2ASD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004108</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003160">
        <property type="protein sequence ID" value="MES1922593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2230.10">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035927">
        <property type="entry name" value="DUSP-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143791">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13983" checksum="D2D60728C61E755E" modified="2025-10-08" version="1" fragment="single">METVKSLFEKKFGKALRPSYENLNKGDIWFVVGKESWNKNLEIPKNDNFGDFKYLIDNTDIQDKRYENLINPELKFDDLICLQTDDYTKLNTIFDVSPEFPRNVVSRPKFNNEIPKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL4</accession>
    <name>A0ABV2ASL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002805">
        <property type="protein sequence ID" value="MES1922436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="31578" checksum="A2C11B2448960028" modified="2025-10-08" version="1">MLNTRIILALTKSHCLAAIDYAAEILIGSSPYNLKKLEAAEHRALTNAIGVARTCARNECQILTSFTSLKKRWALKTLKFLAGLAHRSPNIFNEVKKHRGAKYCSKEDSNEAARKIVLKATGNQYNEELSDYNAEFCEKQMTEIERRNTIEDLASKNKRELLRRLASSKNKLYKTNGVRKLEMTISNLILDTLPFEKIESRLRKSQDENCRTCHVKGTSVHGVFECSRSGSLRKRYLGREIISDLGERVKLIEEHPRRLHSFIWETIRRREAAKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ6</accession>
    <name>A0ABV2ASQ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004228</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003474">
        <property type="protein sequence ID" value="MES1922705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="109" mass="12903" checksum="6DBC67FF0CDF4790" modified="2025-10-08" version="1" fragment="single">MVSDKKRELVRELLKFRGNYKQQNEENTVNGFKIRVWTKKSQVLYDCSCNGRIPSLVITETVKNVKKIKEHMKKHDPVKFKCALCNKKFDLNHFQLNAHMKIHKKGKNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT13</accession>
    <name>A0ABV2AT13_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003758">
        <property type="protein sequence ID" value="MES1922800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8265" checksum="08E09DA584BB210C" modified="2025-10-08" version="1">MALRNTKKTEMRKTRLKIYTAFLFMALVLLCNMRTIAAVATERTFLAIKVLVVSIAGKLDIEAILVEPATGSFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT72</accession>
    <name>A0ABV2AT72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminophospholipid translocase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">DRS2</name>
        <name evidence="6" type="ORF">MHBO_004114</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003173">
        <property type="protein sequence ID" value="MES1922598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032630">
        <property type="entry name" value="P_typ_ATPase_c"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16212">
        <property type="entry name" value="PhoLip_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="39"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase C-terminal" evidence="5">
        <location>
            <begin position="4"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18073" checksum="152DAFA7C7337652" modified="2025-10-08" version="1" fragment="single">QASRAADFSISKFKNLKHLILHHGSQNYPRIATLINFNFYKNIAITVIIFAYFVYSGYSNNIIIPQDSLSFHNLFYTNVPMFAVSISNSSFSRKIIFKWPHLYKRGSENRMLNYTTLFVYLFLAIENGMVVYLLNLYIFDASFIGSNGMGLPSCYVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT88</accession>
    <name>A0ABV2AT88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004386</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003905">
        <property type="protein sequence ID" value="MES1922857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20953" checksum="DFD49C955474F332" modified="2025-10-08" version="1" fragment="single">MAKNNVPFLQIYNELDKKMKNPQNIISNSDYKDDFYDTKKSQKNFKKSNYRFKRFLLFLISSAMFIGAWTAPFFIIKFGVSLKPFLFIACGFCSSFAILLLDLIVYTTMSKNIIEDPLTETFVYEEKIYLTEKGIKIKKRDFWSRFVKMINLNLLIVFSYAVIFLVPGANKLMQQQNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD8</accession>
    <name>A0ABV2ATD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004383</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003897">
        <property type="protein sequence ID" value="MES1922854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11558" checksum="399E5E6E00AFD390" modified="2025-10-08" version="1">MKIQPGQQEKKTVNFRVPSKKKEWKKPQQKIFGLPSNRAKNSSAKQRGSKKKVVGASAPKIPSKNKSYRKTRDISKWEKLKNKGKPENGSTVEKDCNIKMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH9</accession>
    <name>A0ABV2ATH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein fam49b</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">FAM49B_2</name>
        <name evidence="2" type="ORF">MHBO_004478</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004119">
        <property type="protein sequence ID" value="MES1922947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009828">
        <property type="entry name" value="CYRIA/CYRIB_Rac1-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07159">
        <property type="entry name" value="CYRIA-B_Rac1-bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CYRIA/CYRIB Rac1 binding" evidence="1">
        <location>
            <begin position="32"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19486" checksum="A8E6AB9A541CA6AD" modified="2025-10-08" version="1" fragment="single">SIFEEECDEEVLDKINSWTYPENVKESQISVLIHFFQSPTPFITKCSKKIGSSLTENEESSKNDDILQHIPNIFLAVLEAKLVDKDLLGEFASAMVCSLLIVDRLLPEGIFHKDSHVDINGVIDVLTISSPLVFGTKETPNLKKLIQQLCYWSMHLRDDRTPAKIRGRLSVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN0</accession>
    <name>A0ABV2ATN0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004372</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003866">
        <property type="protein sequence ID" value="MES1922844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050079">
        <property type="entry name" value="DEAD_box_RNA_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959:SF1">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE RHLE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="5">
        <location>
            <begin position="39"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="21504" checksum="6B9E88C94A158626" modified="2025-10-08" version="1" fragment="single">ITFSQNYDQIDLVGKEKLQTSQTIEHLAICSHADSLNDVLCAFLRGALSPGDRALVFAERKALCNELVNGPLKGFSTSCRALHGDIPQNERTATLEAFRRKEFSVLVATDVAARGLSIKGLALVVQIGVPRDFETYVHRSGRTGRAGAIGKSVLLYTPRESFSVQKIERNAKIVFKRFQNFKDLVKIKNVVKLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP8</accession>
    <name>A0ABV2ATP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003795">
        <property type="protein sequence ID" value="MES1922811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21465" checksum="7BE16CE62ACC8D89" modified="2025-10-08" version="1" fragment="single">ENQTDTLRDNRTSTTEKKSKIKENVKKKCSNLCSSDLPAASKMRVAVCISQIVLCGLTIFGVIFVESSLKYFILIILSLTILVSIIIVVVITKKRTLLGHRYLGMLLHFLCVLNIFSWLLSLMDYSKGIRFFGFFLIFNFLLVYSFDSAELLIDVQRKILVIGILGHPPKYRNSYKANEEDYYYYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB1</accession>
    <name>A0ABV2AUB1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004757</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005124">
        <property type="protein sequence ID" value="MES1923214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023179">
        <property type="entry name" value="GTP-bd_ortho_bundle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050755">
        <property type="entry name" value="TRAFAC_YlqF/YawG_RiboMat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11089">
        <property type="entry name" value="GTP-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11089:SF30">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN-LIKE 3 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G" evidence="3">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="22714" checksum="192CCA29E9D279C6" modified="2025-10-08" version="1" fragment="single">PNVGKSSIINSLKRKKITSTSPVPGHTKNIQTVILDKRIKLFDSPGVIFDDENNYSQLVLKNSLRIEDIKNPENIVDQILKKCPKMNLCAVYNISPFDKTEQFLYSVAAKKGLLKKGGIANVDAAARSVIRDWNSGKVSYYTSPPVETLSKFDEINIIEGDFKNEIERILEINKSDIDKCEMVDDESNQNRPIKKFVPIKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB9</accession>
    <name>A0ABV2AUB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004587</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004491">
        <property type="protein sequence ID" value="MES1923054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="10671" checksum="5D168F23B857D256" modified="2025-10-08" version="1">MLEDHSAVLVWENMEAHLRLQPLTQSPQAKYLTNLLVKVLVDLRKNVTLTVLRMYRVVSDLRMEVVKSYVVKRMKSERMSFLGWRLLGLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD0</accession>
    <name>A0ABV2AUD0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Vacuolar protein sorting-associated protein 13 DH-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004834</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the VPS13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005434">
        <property type="protein sequence ID" value="MES1923285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026847">
        <property type="entry name" value="VPS13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16166:SF93">
        <property type="entry name" value="INTERMEMBRANE LIPID TRANSFER PROTEIN VPS13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16166">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="195" mass="20980" checksum="23E838B077BBD183" modified="2025-10-08" version="1" fragment="single">RLKGVSKITQDSDEEPKYERKSENVASGIISGATKFGDGIYKGITGVITKPIVGGREKGVQGFFKGLGKGVVGVVAKPVAGALNLVSDTFDGISHTPSYIRKKIHSHKLGGVPVRVARVIESNHFSEYNLEKALAQKTVLSFPHGDYAKQHEISKESASKLAEETFLSFQSMRTGKQGVISTSSRILIVPLKNGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ3</accession>
    <name>A0ABV2AUJ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fibrinogen C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004466">
        <property type="protein sequence ID" value="MES1923047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.215.10">
        <property type="entry name" value="Gamma Fibrinogen, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036056">
        <property type="entry name" value="Fibrinogen-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014716">
        <property type="entry name" value="Fibrinogen_a/b/g_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002181">
        <property type="entry name" value="Fibrinogen_a/b/g_C_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00147">
        <property type="entry name" value="Fibrinogen_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56496">
        <property type="entry name" value="Fibrinogen C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fibrinogen C-terminal" evidence="1">
        <location>
            <begin position="4"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6801" checksum="DFDD5C6B1D5C76E9" modified="2025-10-08" version="1">MTFAGNDQIHLLTKDRNTLYFAITLKNGTTQYGLYSPVSLSDEADKYRLNVEEISSGTLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ6</accession>
    <name>A0ABV2AUJ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Aspartate transaminase aat1</fullName>
            <ecNumber evidence="7">2.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">AAT1</name>
        <name evidence="7" type="ORF">MHBO_004598</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.1" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010004515">
        <property type="protein sequence ID" value="MES1923063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004069">
        <property type="term" value="F:L-aspartate:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000796">
        <property type="entry name" value="Asp_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11879">
        <property type="entry name" value="ASPARTATE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11879:SF22">
        <property type="entry name" value="ASPARTATE AMINOTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16011" checksum="242EB44F0220BCB4" modified="2025-10-08" version="1">MIFHKLNKPFVSRTKAVMSTSQLLKNNKKEFIKSTRNLSTFGGIEEGKKDAIFGLHEQFERDSDVKKVDLTIGSYKDDNGESYVFPSVKAAEISIVDKNLKMDYLPISGNRGFLKHALYLMYGKDNNVLMENRVAAIQSLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN0</accession>
    <name>A0ABV2AUN0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Single-stranded DNA-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004938</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005874">
        <property type="protein sequence ID" value="MES1923374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="96" mass="10973" checksum="5D23EB7BC6FB55C4" modified="2025-10-08" version="1" fragment="single">CVMFRETASIHKNMLQYIKKGTRLNISGSINKIDTYQNKHGENKASVNFIVALIQFLPKAKSDDQINKMDMQPEKGKTYPLHTKEDEEALNAFSNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV2</accession>
    <name>A0ABV2AUV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006182">
        <property type="protein sequence ID" value="MES1923432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12200" checksum="0717261E036E5F32" modified="2025-10-08" version="1" fragment="single">SLIRSILIKSFKKLLVPQIALNFKKSLKDEKKSVFDFMSEKRLNFVFDSSADFLVAVFVKSESLKLEKILNLKFDKQNESLAKTENDNFEIVLVDNAVDLKSDLIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX8</accession>
    <name>A0ABV2AUX8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005011</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006203">
        <property type="protein sequence ID" value="MES1923439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14153" checksum="223E829DE3A5CF71" modified="2025-10-08" version="1">MEVLEPLRSKIALEKDMSKIQFSQNNNKESDFDNDLTNLPILKHINQTECPIFVIFSKGTVRIATTSFFKSLKYQKTVSICDTKTSYKYFAALIENLIYLEKDGPKSKSRLLVFSQKEPFFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV08</accession>
    <name>A0ABV2AV08_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005067</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006436">
        <property type="protein sequence ID" value="MES1923491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16806" checksum="FD01736CA3B7EA3A" modified="2025-10-08" version="1" fragment="single">MNDAMYLFDSKIPSECVNNFRNPSIAQSRSQSKKRIKDLKTEALQKLRNYLEIKDEVENENKKRRKNKNLTNSNGNGIGNFRREDLRREDLRSILIEREFVLMDEISSSDEQMEFETISTRSNLRRLDLSRESEFVDNSIPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV20</accession>
    <name>A0ABV2AV20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005079</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006490">
        <property type="protein sequence ID" value="MES1923502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20041" checksum="1B0A092D83005253" modified="2025-10-08" version="1" fragment="single">MNEMEEKHVVVLIEVTEDDYKSIRPLHRNWLHNPVPPRSASVGQNRVVFHPAIPSPLKAVEAVTQSFLDCKEGLNERMLENLNADLLTDFKEKMYDYFETVQQFEDCAVDLAKSFKDLKTPIPLSERMLRVKECRESLWEYMDPLQQDVGGGKVRALSAKLKNLEKIEESFVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV90</accession>
    <name>A0ABV2AV90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005171</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006968">
        <property type="protein sequence ID" value="MES1923575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="17221" checksum="F6184C3EF7C45FD0" modified="2025-10-08" version="1" fragment="single">MMPNAQSVEVKDGECVPEWKVNPTTDFKLQNKDGAMLWCYMPDTIKHWQVVGTHFGRLIANGTTAYRICADDEYEQGSGNKYLHAVCHKGILDISRKCTKMPPALISLIKHNFYANLVDKDSLLKLSTSSLSSSAVSTTCCAVTLIYMRKKITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC6</accession>
    <name>A0ABV2AVC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007256">
        <property type="protein sequence ID" value="MES1923622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15473" checksum="F06F760FF75236EB" modified="2025-10-08" version="1" fragment="single">IGLCRNKDKLYISTVGTDSTYKESKIERLQLPLDINNFKSQLNLLYSSSENDPGTLNCTYSDAYLFFPHKLKDGPYTEIAALYSHFKELIVITELKFATQLVELDDKLLVPHNDKIFVLKGEIDTSIIDQLKPSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE4</accession>
    <name>A0ABV2AVE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005239</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007289">
        <property type="protein sequence ID" value="MES1923630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="10965" checksum="F579F24E5291F08A" modified="2025-10-08" version="1" fragment="single">MIGEHVAYVNRAVFGREEDNDEDAGTQVEGLAGTGIAYEYDAEEGELLEGLYAIHVGSVATLNAEGSAVSDEGSGELGRIFTKYYTNYIEESEDWGKYQTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG1</accession>
    <name>A0ABV2AVG1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005268</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007444">
        <property type="protein sequence ID" value="MES1923650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="82" mass="9151" checksum="31C775105238E72B" modified="2025-10-08" version="1">MVTSSSSAAIGPSLGLFCQVGMSFFSKGRAMFRLLCNTFACSSGLSPHNIRYTVAYNVFYMYRRVHAIIKDDVSRSVNTKFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW92</accession>
    <name>A0ABV2AW92_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_005210</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010007167">
        <property type="protein sequence ID" value="MES1923606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018525">
        <property type="entry name" value="MCM_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF26">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01657">
        <property type="entry name" value="MCMFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00847">
        <property type="entry name" value="MCM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM C-terminal AAA(+) ATPase" evidence="5">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="75"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="77"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="89"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="15804" checksum="9AEFBC52CD00040E" modified="2025-10-08" version="1">MVLEGGALVMADMGVCCIDEFDKMEEGDRTAIHEVMEQQTVSISKAVFCLYFPSSKNDRKSQILKGNLHNFERENISPRSSKSSLRTLRQIKKSRSKHRSSGGANVPVRPSFRFGRFGVRESGQRSSFSYLLCTYEQKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE11</accession>
    <name>A0ABV2AE11_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000007</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="304" mass="34677" checksum="32A1A188EBADD831" modified="2025-10-08" version="1">MKGTEPDTFVNLNQSPFDFNDALRKLSGDLIELFPTYKKIYKLTLQLCNSPISDSVINKLMSSFQRASKTMGGSTNFTIVQFVENGPKPIFLNNLLKMLNTQSAIYVPKIHFFPNSKSKEKFELISKNVVIDILCNSVVALEARHGIFTPDGSREAYLNSIKAAHQLSVHAKDIFDEAKLALQKKQKTIGQEEQDLVESELAVCGVKRVKTRKFQPSSHLYYKKYRGLAIVKDVVQNIKIFSNRDHKLLIESDRDALMICLSQLKDNASVIDHRYFISELSSVIDGHKEMTCIRFVYDITRFRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEB5</accession>
    <name>A0ABV2AEB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Signal peptidase complex subunit 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">SPC3</name>
        <name evidence="10" type="ORF">MHBO_000083</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SPCS3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007653">
        <property type="entry name" value="SPC3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12804">
        <property type="entry name" value="MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12804:SF0">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04573">
        <property type="entry name" value="SPC22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016089">
        <property type="entry name" value="SPC22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="22089" checksum="2E8394319B7A693B" modified="2025-10-08" version="1">MNTFLKRGSSITTFYISVLLFFGFCSWASDNYMAIYKRFPEPEIPHKLWLSKKSSPEWSGMKNYVTNNKILYLRNLRFNLKADFRSMFTWNVKQIFVYVAIIPEEGDFPEYVIWDKIIQRKKDSNLKLFKVRNKYRIEEYDEKLNEGKFRLALRWNVMPWIGFMSYENRNGLSTKPVEAINGQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEJ2</accession>
    <name>A0ABV2AEJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Sodium/hydrogen exchanger 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">SLC9C1</name>
        <name evidence="12" type="ORF">MHBO_000137</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018422">
        <property type="entry name" value="Cation/H_exchanger_CPA1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004709">
        <property type="entry name" value="NaH_exchanger"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10110">
        <property type="entry name" value="SODIUM/HYDROGEN EXCHANGER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10110:SF86">
        <property type="entry name" value="SODIUM_HYDROGEN EXCHANGER 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01084">
        <property type="entry name" value="NAHEXCHNGR"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0915">Sodium</keyword>
    <keyword evidence="9" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="98"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="199"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="245"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H+ exchanger transmembrane" evidence="11">
        <location>
            <begin position="27"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="323" mass="35843" checksum="3AC8F6BAD66F4BEF" modified="2025-10-08" version="1">MSLSSDSSWLFVAFIGMLIGVIVYHLNKKFHNKIPFSVILLLVGVSIGGIDIALKRKVPFIDIIETLNPMIFMQIFLPNLIFYSVFSTNHHTLMRVKWHALVLAIPGVLINTLLTSIICSYILPYRWNIKISLLFGSIVSATDPVAVVTLLREIKASQNLSTVVETESLFNDASAIILFDVLTLMIIDSQKSKTASFYIFRCLVLLSGSLIGAIFGFITSLYITTVLNDELLETSATFIGINLDFIVADLLKSSGVLATVAMGLVIARNKARFSTRVWVIIKGPCKLEPLLGAARVFLEVPHFSDLGDHRLLQDDQRKQRVVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEK5</accession>
    <name>A0ABV2AEK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000015">
        <property type="protein sequence ID" value="MES1918107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="358"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="401" mass="45666" checksum="C5D955AD416CCA80" modified="2025-10-08" version="1">MIFTSHCKISENNLAKYSYKNKQGNYIDDLKCDENYAPSQWKFVKSFHKNVSVFKFDSCANVLKPNDCQLFNGFIEENCMVVVEKGYRIYQKAYLKTYPITQDSYKSICESIYKGCLVPEEANLMSSCPFLGEDYFFALCSLTPAVSYRFKKDGNFVKTLDLYCPNNGLVLDEFEIVKGCSLLDNVNYTDCVTENNYFFTNCENSVSKDYKIKIGEEFVQKAQLGPKNCSGIEVVKGFKLILGCKKIDDDNIIYNTKCNFSEDKTLFFGECTFENKIGSVLNENVFVCENGKSNANSFYNNCHVTHIPNGRIIEGCNEIGQCIYACDPLYKGADGGKKTTTACRMHGFDIYPTCKRDYTFYLVTILLPLLSFAFIVAITVLVIRKKYMPDVDIAEKSIYVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEW4</accession>
    <name>A0ABV2AEW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000223</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18423" checksum="089D7BC100350EC1" modified="2025-10-08" version="1">MSKTERISKYTYVMIVFLALIAIAQSALLGIYIYFFVIEYEESFKTLLKNHDFMRPITLFSLTMLALLNDGKSLKSKIGAGLIIPSLTILVAFPVLDKLASLEHPSVFFRDKSNVVLLLICVFALLTAFYSIINASWCFDIKEENTKNSKKDTSTFDISLQSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF45</accession>
    <name>A0ABV2AF45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000299</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000040">
        <property type="protein sequence ID" value="MES1918315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006461">
        <property type="entry name" value="PLAC_motif_containing"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01571">
        <property type="entry name" value="A_thal_Cys_rich"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15907">
        <property type="entry name" value="DUF614 FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04749">
        <property type="entry name" value="PLAC8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13774" checksum="28E985B59CF72F19" modified="2025-10-08" version="1">MKIGTGLNCTEKSPRTQILGGNDWSNGLFGCFDDPMLCFMSCCVPCLPEARIYTKIRDDDNLILYTCVFCFIDLIGCFTCATCFLRTQVRKNYSIEGNMVFDFFISCCCMCCAIVQMHSQAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF60</accession>
    <name>A0ABV2AF60_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000308</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000043">
        <property type="protein sequence ID" value="MES1918326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF458">
        <property type="entry name" value="SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="128"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="173"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="217"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="251"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="282"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="325"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="365"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="410"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="436"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="480"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="10">
        <location>
            <begin position="102"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="15"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="31"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="73"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="518" mass="57603" checksum="721EAC281C8131E6" modified="2025-10-08" version="1">MKDISIYPGSNENSESTKKQINKNDIELGKSQKQNNDEVTFSGENSVKGAKQNDSSEKNDSKDLTLKRDHSGSKNSNNSLSSMTETETEEPEERVGYLIGRTRTIANNCNLILGSGILSLPKAFQESYYYPGLVLLLLVCCMADFVCVTIIKLAKIKKSKVYEELAEMVLGKIMYYVICIFCIIYSFGGMMGYSQIVYSTIRSLLSDVMKSKSSSEITQASVGVTIAAFAVFVLPFVYFRDLSKLSWMSMLSVSTFGVIVVILLVTGIRINRNGHSNFIPLSFRGFLTAFGALSFALVCTDSVFPVYRGLIDNTMSRWSTVMHTTVIFIAIVYGFFATLCFFLIPNLDANVLNSPSISNLLEIKVAKILLSITLLLTFLTKVHVARGYIFSIISKSYMPITNLPKKQFMAMHFGVTSLIIVFNVAIGIAVGDLLFIVALTGLISATIIGYVAPVLIYFKVMTFKKLWDDFKSAFTGRISFVLRLFNIFNLLFPMLIIAFGTIGFLVGVPLEIYRFVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF78</accession>
    <name>A0ABV2AF78_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ubiquitin-like 1-activating enzyme E1A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">AOS1</name>
        <name evidence="8" type="ORF">MHBO_000320</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein sumoylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ubiquitin-activating E1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004839">
        <property type="term" value="F:ubiquitin activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000011">
        <property type="entry name" value="UBQ/SUMO-activ_enz_E1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953:SF162">
        <property type="entry name" value="SUMO-ACTIVATING ENZYME SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953">
        <property type="entry name" value="UBIQUITIN-ACTIVATING ENZYME E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01849">
        <property type="entry name" value="UBIQUITINACT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="Activating enzymes of the ubiquitin-like proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="THIF-type NAD/FAD binding fold" evidence="7">
        <location>
            <begin position="17"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00044354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="322" mass="35847" checksum="11D976E15A49A163" modified="2025-10-08" version="1">MSTDSEKKISEKEKEIYDRQIRVWGFKAQQRIRNASVLLIGANALSGETAKNIVLAGVGELNILESENRLVTQNDINSIFFLEQKDLGKKILGAVKTYLAELNPNVLVNTIEADLTATDSRLLKKQSAVCSCEATLAAQLFADRICRANNVCYLSGDVFGDSGVCFSDFGESFVYSEKGKQSELRFSSLEDTLAFTETAPRRTLKNAMRREKLYFRLIKLLYQFEHKNSRWPTPSDSPEIERDLYSGSAQSEFEFPAGELKFLFDVSEFFVSLQRNSPNVAAILGGVLAQEILKAAAGNARPLQNWLFFGPLVGNSAVVLNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP8</accession>
    <name>A0ABV2AFP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Arginase, catabolizes arginine to ornithine and urea</fullName>
            <ecNumber evidence="5">3.5.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CAR1</name>
        <name evidence="5" type="ORF">MHBO_000207</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the arginase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.1" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004053">
        <property type="term" value="F:arginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.10">
        <property type="entry name" value="Ureohydrolase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43782">
        <property type="entry name" value="ARGINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43782:SF3">
        <property type="entry name" value="ARGINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00116">
        <property type="entry name" value="ARGINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="Arginase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0464">Manganese</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="285" mass="31671" checksum="D03D10FB9B778BDD" modified="2025-10-08" version="1">MSFKRKTFNLISAPFYSSKPTAIQSSVPKLIRESGAIKSVVKNGFKVRHIEEILMDWSSENSFDNHKVLSDRIQSVVSADSFTLILGGDENVSLGTIPGILRKKANSSVIKICPESFLGKTDKFENSILPLLKKKVPLTNQPEQLNWLAKVPPLKYCAYIGLSETSDKEKKLLKKAQISYFHCPNEYAIHASVIKLFEFLRSSENWHLSLDFNVLKADLAVVRNPQKSGLSLLGVQFLCKVLYMSGNLTSMEMLNVDLGHEPDDARKRALRFAGALVDAATGGPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG97</accession>
    <name>A0ABV2AG97_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA (guanine(9)-N(1))-methyltransferase</fullName>
            <ecNumber evidence="1">2.1.1.221</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">TRMT10A</name>
        <name evidence="8" type="ORF">MHBO_000630</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>guanosine(9) in tRNA + S-adenosyl-L-methionine = N(1)-methylguanosine(9) in tRNA + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:43156"/>
            <dbReference type="Rhea" id="RHEA-COMP:10367"/>
            <dbReference type="Rhea" id="RHEA-COMP:10368"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:73542"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="EC" id="2.1.1.221"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.221" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000110">
        <property type="protein sequence ID" value="MES1918708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052905">
        <property type="term" value="F:tRNA (guanosine(9)-N1)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18089">
        <property type="entry name" value="SPOUT_Trm10-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028564">
        <property type="entry name" value="MT_TRM10-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038459">
        <property type="entry name" value="MT_TRM10-typ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007356">
        <property type="entry name" value="tRNA_m1G_MeTrfase_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13563">
        <property type="entry name" value="TRNA (GUANINE-9-) METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13563:SF13">
        <property type="entry name" value="TRNA METHYLTRANSFERASE 10 HOMOLOG A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51675">
        <property type="entry name" value="SAM_MT_TRM10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM-dependent MTase TRM10-type" evidence="7">
        <location>
            <begin position="64"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="48"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="254" mass="30397" checksum="E2D9A42E71E8ACD4" modified="2025-10-08" version="1">MERLKANYVKSKNELKREQKYRNKVEFMQNKRRQKRILKKTNKKSNRRATPNEEQNNMKYTRRESLQLFRENVAKSRFNIVFDLSFNNLMPERKINSLVNQMLYCYAENKRNFESPAKMIWTSFGSSVEKFVEQKKIDLDKWMIEKDARHWKDIFRSEDIVYLSPDAEEVLGEIEEEKVYVIGGLVDNGHEKNLTLDIAKELGVSRKKFPVDQINKKNLVFTVNQTFEILVKVFRGESWRETIAEVFPKRKAKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGC7</accession>
    <name>A0ABV2AGC7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Kringle domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000474</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.20.10">
        <property type="entry name" value="Plasminogen Kringle 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000001">
        <property type="entry name" value="Kringle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013806">
        <property type="entry name" value="Kringle-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038178">
        <property type="entry name" value="Kringle_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00130">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57440">
        <property type="entry name" value="Kringle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50070">
        <property type="entry name" value="KRINGLE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0420">Kringle</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045964279" description="Kringle domain-containing protein" evidence="3">
        <location>
            <begin position="19"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="domain" description="Kringle" evidence="4">
        <location>
            <begin position="27"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="379" mass="42292" checksum="6F33E699738853F9" modified="2025-10-08" version="1">MQIIILILWLSLLSSSAAKKTTSDKAEKCHSIGIDYRGKLNKSISGKPCKVWPSFYIYTFPGSGVGPHSFCRNPLGKMDGPFCITKLGLKGKMDETERCNVTCAPGMIQRKLDHVCETVVKEFDVGTLQKCVESCMKSKDCTDLSFKTGGSCYQCAKKDRGRKRSGYDMFAHFDMSKLNHCKVSKSVRRNRLLDSSECTDGAASEDCVIMCRAGYVGDVSVKCKKEGTEFEIKSDCEMGCYLEAADAKPMMDLRNCQSSNRKLVSKKDCVISCLSKLGEVEVKCKRAGAAFEVTERCKVPKCKINFVRDKAELKKIDLGDCDTKKSGPILLEQCNPLCKEKFKGTVVPNCNPNGFFDLNVHCFEEEKEEKSKKIKKKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGE0</accession>
    <name>A0ABV2AGE0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Wbp11/ELF5/Saf1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000118">
        <property type="protein sequence ID" value="MES1918756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019007">
        <property type="entry name" value="Wbp11/ELF5/Saf1_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09429">
        <property type="entry name" value="Wbp11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Wbp11/ELF5/Saf1 N-terminal" evidence="2">
        <location>
            <begin position="5"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="11351" checksum="D306777B62C7AAA3" modified="2025-10-08" version="1">MLGKKKFKHPADAFRKRLRKKEIKRNKEQRDERRNQIILAKDEDSLKAEIKKYDLLESKNRLEPRHKIIKQKLKTALNAKIAEKVFQIYKKFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGE8</accession>
    <name>A0ABV2AGE8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Arf-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000642</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000113">
        <property type="protein sequence ID" value="MES1918722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08204">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051718">
        <property type="entry name" value="ARF_GTPase-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45705">
        <property type="entry name" value="FI20236P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45705:SF1">
        <property type="entry name" value="FI20236P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00405">
        <property type="entry name" value="REVINTRACTNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00105">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50115">
        <property type="entry name" value="ARFGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Arf-GAP" evidence="3">
        <location>
            <begin position="8"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="129"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="25752" checksum="2BF6CA871A1FC697" modified="2025-10-08" version="1">MDRSKQTHLQLKRLLTLEKNRFCADCRAISPRWASVNIGVFICIKCSAVHRNMGVHISKVRSVDLDKWRQEWVQTMAKRGNKQVNQSFEIPSAFHINPSTMSECREDFIRKKYEHQIWNRPIETKTEKNENFVENGFGQNRENGGKQSEETILQKNQKIDFDKDSQKTDRLDFGFDTFRSEDSAVSKNNQNDRSERSSEKDVFDASGNDKKLIMSLYSNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI8</accession>
    <name>A0ABV2AGI8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Brix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000124">
        <property type="protein sequence ID" value="MES1918781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007109">
        <property type="entry name" value="Brix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045112">
        <property type="entry name" value="PPAN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12661">
        <property type="entry name" value="PETER PAN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12661:SF5">
        <property type="entry name" value="SUPPRESSOR OF SWI4 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04427">
        <property type="entry name" value="Brix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00879">
        <property type="entry name" value="Brix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50833">
        <property type="entry name" value="BRIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Brix" evidence="1">
        <location>
            <begin position="24"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="28630" checksum="5429FE9C3D9054FD" modified="2025-10-08" version="1">MPRKGSKRVKHRTHIKNEDALKGPLSYVFKQGKIGKSPSQLILDFRAVFRPFTQQKIKQKRNTKLKHFLNASKEFSQITYLTKNGENLNLKIIKLPKGPTFLFRVKEFTLVKDIAKITKKFNNNNNLYFFHPLVLFKNFDGVDDEKQLLNALFKNSFAKVDKNTKINQIRRVVIFEYDNKTKEIKFRHYSIRKNNFEDEKSLKLTEIGPRLTLSTIKIEESVNNGRVLYKFNDQNRIKEDFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGL8</accession>
    <name>A0ABV2AGL8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">R3H domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000728</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000134">
        <property type="protein sequence ID" value="MES1918828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001656">
        <property type="entry name" value="PsdUridine_synth_TruD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13326:SF21">
        <property type="entry name" value="PSEUDOURIDYLATE SYNTHASE PUS7L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13326">
        <property type="entry name" value="TRNA PSEUDOURIDINE SYNTHASE D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="183" mass="21177" checksum="CCD9BBD2A35284ED" modified="2025-10-08" version="1">MSLLDEASKAAIERYLEIAESSKYRTGKANQKSVGMTEFVSKEVPGMKFEVKQKCRDFLVQEIPRSKAPLVLKNCQLPQTECDFYRLKRKRKFERTNYPTKEIACIEAEKILRELLPQKEKNSVLAFLKEADKEEAALKIEKKLNKEDRKLVHQMISKNFSLFDSETVNGEAESSLKNIKVLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH57</accession>
    <name>A0ABV2AH57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Iron-sulfur clusters incorporation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">IBA57</name>
        <name evidence="4" type="ORF">MHBO_000646</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000114">
        <property type="protein sequence ID" value="MES1918728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="entry name" value="Probable tRNA modification gtpase trme, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017703">
        <property type="entry name" value="YgfZ/GCV_T_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045179">
        <property type="entry name" value="YgfZ/GcvT"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03317">
        <property type="entry name" value="ygfZ_signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22602">
        <property type="entry name" value="TRANSFERASE CAF17, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22602:SF0">
        <property type="entry name" value="TRANSFERASE CAF17, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103025">
        <property type="entry name" value="Folate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="270" mass="31364" checksum="2177E69CC98CED4D" modified="2025-10-08" version="1">MWNKFQTLHFKRFSKTALPLFGPILHKSILSKNSEKMLCKLKNRVIIKVIGKEANNFVQNLVTANIIKLENGKLLFGLFLNRKSEILADCFFFGQDNDVLIDCAKEKSTFLLDHLSKYNLRKKVDIKLEEPPSIYVYSGKKLRMRKNVYDDPRAALLGKRIYDYNNDFLKEKIEETTNENFYSAHLATNGIQNTITSEMKDCNPFSLNYDLLNAIDFKKGCYLGQELVSQIHSTGSVRKRLLPALIIKVLLEYVEFKNRRDENGRYFGKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH66</accession>
    <name>A0ABV2AH66_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Cyclin-dependent kinase 2 homolog</fullName>
            <ecNumber evidence="4">2.7.11.22</ecNumber>
            <ecNumber evidence="3">2.7.11.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Cell division control protein 2 homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="14">cdc2-related kinase 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="primary">CDKC1</name>
        <name evidence="18" type="ORF">MHBO_000903</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="11">May form a complex composed of at least the catalytic subunit CRK2 and a cyclin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="18">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.22" evidence="4"/>
    <dbReference type="EC" id="2.7.11.23" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000181">
        <property type="protein sequence ID" value="MES1919025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004740">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050108">
        <property type="entry name" value="CDK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056">
        <property type="entry name" value="CELL DIVISION PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056:SF233">
        <property type="entry name" value="CYCLIN-DEPENDENT KINASE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 18" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 15 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 16" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 18" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="34"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00038543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00039612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00041902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00042858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="MES1919025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29079" checksum="ACC25D5C383F8DD8" modified="2025-10-08" version="1">MEHSLEATSFSRPNKERWLGDHDINTFKQEIKSSRRIKKIGEGTYGAVFKTESPTGMNVALKKINLENEHEGFPITALREIKMLKAIRHPNIISLLDVIPVHTGGRRPDFHLIFEYLDHDLAGLMASGEVVLQEQHVKHCLYELLRGLEYLHNRCKLIHRDVKLSNILVGKDGSIKIADFGLARQHYSDKRDYTGRVVTLWYRAPELLLGIKNYSTAIDIWAAGCVFSEIVFGKPAFPGETEIQQLTLICKVLFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH86</accession>
    <name>A0ABV2AH86_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Superoxide dismutase</fullName>
            <ecNumber evidence="7">1.15.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000670</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Destroys radicals which are normally produced within the cells and which are toxic to biological systems.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>2 superoxide + 2 H(+) = H2O2 + O2</text>
            <dbReference type="Rhea" id="RHEA:20696"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:18421"/>
            <dbReference type="EC" id="1.15.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the iron/manganese superoxide dismutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.15.1.1" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000119">
        <property type="protein sequence ID" value="MES1918758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.990">
        <property type="entry name" value="Fe,Mn superoxide dismutase (SOD) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.40.20">
        <property type="entry name" value="Iron/manganese superoxide dismutase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050265">
        <property type="entry name" value="Fe/Mn_Superoxide_Dismutase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001189">
        <property type="entry name" value="Mn/Fe_SOD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019833">
        <property type="entry name" value="Mn/Fe_SOD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019832">
        <property type="entry name" value="Mn/Fe_SOD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019831">
        <property type="entry name" value="Mn/Fe_SOD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036324">
        <property type="entry name" value="Mn/Fe_SOD_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036314">
        <property type="entry name" value="SOD_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11404">
        <property type="entry name" value="SUPEROXIDE DISMUTASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11404:SF6">
        <property type="entry name" value="SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02777">
        <property type="entry name" value="Sod_Fe_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00081">
        <property type="entry name" value="Sod_Fe_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000349">
        <property type="entry name" value="SODismutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01703">
        <property type="entry name" value="MNSODISMTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54719">
        <property type="entry name" value="Fe,Mn superoxide dismutase (SOD), C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46609">
        <property type="entry name" value="Fe,Mn superoxide dismutase (SOD), N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00088">
        <property type="entry name" value="SOD_MN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Manganese/iron superoxide dismutase N-terminal" evidence="8">
        <location>
            <begin position="21"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Manganese/iron superoxide dismutase C-terminal" evidence="9">
        <location>
            <begin position="114"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00049204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="26756" checksum="2ACF388B1FC4160D" modified="2025-10-08" version="1">MFRLKKFPRFCTTEVFKIETELPALPYKYDALDPIIPTRIMELHHSKHHQGYINNYNIAMNIYNQAETKKDKVAMEKANKNIWFNGGGHVNHSIFWKNLCPVPEGGGNIDYAPNVMAEIKKKYKSFEIFKKEFNAITVGIHGSGWGWLIYSRKNKELEIKTTQNQEMVAFKHKGSLPLLGVDVWEHAYYLKYENRRNEYLENIWKVVNWKDVERRFMSRFNLSESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHB5</accession>
    <name>A0ABV2AHB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000942</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000191">
        <property type="protein sequence ID" value="MES1919071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3500.10">
        <property type="entry name" value="Tex N-terminal region-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.310">
        <property type="entry name" value="Tex RuvX-like domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.140">
        <property type="entry name" value="YqgF/RNase H-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032706">
        <property type="entry name" value="Spt6_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028231">
        <property type="entry name" value="Spt6_YqgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023323">
        <property type="entry name" value="Tex-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017072">
        <property type="entry name" value="TF_Spt6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037027">
        <property type="entry name" value="YqgF/RNaseH-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10145">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR SPT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10145:SF6">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR SPT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14635">
        <property type="entry name" value="HHH_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14639">
        <property type="entry name" value="YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription elongation factor Spt6 YqgF" evidence="2">
        <location>
            <begin position="259"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="Transcription elongation factor Spt6 helix-hairpin-helix motif" evidence="1">
        <location>
            <begin position="419"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="627"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="627" mass="71704" checksum="B2392CE8F0A450C5" modified="2025-10-08" version="1" fragment="single">MDLKTLRCIQMLGFSFTKFDKLREKLEIEDFDEIQFDQNLDEANFLENLANCSKGENSRFSSISDVENFIIKFLSTEIGKNPFFKKISRKIFLDNAELSTIPTKKGKRNINWMNPLFTIKKLTKKPISQFFDEFENPSSHSEAMLEQYALLTDALERGYIKREFSFKDDLDQSRKYGQLEKTLLSIYSEPLSESQKVTELRSQIVLKAIETHFLPDCIAFADDLLLEKSQNFIAANCSKALYEEYLVRERLWKNDFGGSVIAIALCDGEEPSCCAVLDQNGLLMDYAIFRFLKFAQSSGKNAKKDQNVRILKKKEDLKTFKELILEHSPDLVVIGASHFRCDKVLSDIESVCSVSEKRISCELVKPQIAKIFERSSRAENEFFGYPAGIRNAVSLGRFAIDPLSEICYMTFGDLSEQNDILSLKLDKDFKLVPKMKLMERLTETLVSFVNRVGVELSKGVLEHPHKKAVLQFVSGLSPKMAELIAKKSKNGIQSRAELFGIISGFPKIYQNCVGFLRLSSSEQKEMNRINLGETRIKPDLLPLTEKILKFALREANVDFAEKTKVEKLAKMAKKNLKAILNFDCEKCLKEFMSGDNEENGFGEENLKYFINLIIDEIKNPFQVGELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG9</accession>
    <name>A0ABV2AHG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000986</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000204">
        <property type="protein sequence ID" value="MES1919121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6455" checksum="C6E2CA444F40E16A" modified="2025-10-08" version="1">MTIKDLLLKSISAPRKRNSNPEKYTNFILEKTHFTDKSEKMAVLSTKLEKAIESSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK3</accession>
    <name>A0ABV2AHK3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001004</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000208">
        <property type="protein sequence ID" value="MES1919140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="252" mass="29226" checksum="CD2340B15D6B7E7D" modified="2025-10-08" version="1">MLRFLKTILDIKKGCEIKNFLEIILDKKEKDFVCSNNNNTIRIRCPNGNLFTSFGQSVKGFRVLQQFCTSGCQLSLFQKQNNSESYVIRNGHSLEIICEKRKIKQNLNCIMGTLYTKIWTILDSKNKIADFCKNLCPLNKENGFNVDLIESGLNATVYCLNKKFVKIGNKFFDSVEIGCHNSKYIFNSMKFAEIKCQNLNSSKFNDLGKKFGYYYTLNDKDNTNEIHFKCNDKIKYLDNDWKNKINKTCSGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ2</accession>
    <name>A0ABV2AHQ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">ATP-binding cassette sub- G member 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ABCG4</name>
        <name evidence="9" type="ORF">MHBO_001058</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000222">
        <property type="protein sequence ID" value="MES1919195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC2_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043926">
        <property type="entry name" value="ABCG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050352">
        <property type="entry name" value="ABCG_transporters"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041">
        <property type="entry name" value="ABC TRANSPORTER G FAMILY MEMBER 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041:SF139">
        <property type="entry name" value="PROTEIN SCARLET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19055">
        <property type="entry name" value="ABC2_membrane_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="160"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter family G" evidence="8">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="ABC-2 type transporter transmembrane" evidence="7">
        <location>
            <begin position="109"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF19055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="21967" checksum="B33199199D30DD3A" modified="2025-10-08" version="1">MFSKFDDLMVVSAGMIVYNGPADKSMAVFSKMGYPMPENSNPADHYLAVVQIQKNEDIQKVETMAEEYKEILNEIENKEGNEAETVTNEKALEEKKLRTPNFLEQAMILTLKRSLKNYFRTPSLTYVRIVQTVFFALLCGILFFDLGYTESEVIARQGALFFILTNLMFNCVLNVVLVCFYYQKDHFNFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR7</accession>
    <name>A0ABV2AHR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001016</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000211">
        <property type="protein sequence ID" value="MES1919152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="18424" checksum="7D9417AFA63A224B" modified="2025-10-08" version="1">MTYPNKTFFEIHRYVTLPISILFSILYPFLFFCLKKPFDTENIKHKCRLIGWILSIFISVVNIDFYSELQHLPKMTVSLLKLNIEFLNCLMYISMAHFMLMMLFEARMSPNRKYVKKLDICVIVVYIAILVGLEVFCFIFENLFFVIYQFKYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT4</accession>
    <name>A0ABV2AHT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001092</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000233">
        <property type="protein sequence ID" value="MES1919232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="170"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="233"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="263"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="381"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="472"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="499"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="544"/>
            <end position="563"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="587" mass="67273" checksum="E26ACA01C0ECF538" modified="2025-10-08" version="1">MLFDSLESKKKASDPKEDVGKLSKLAIFILTINTILICLCLALFLKSTLNMINWDASGISFDVQKSQLHIAMYLFTLLIGYKYAFATISRRENSNISWFFMVYTPFIVFAVSVCGLENSQNELIQNILFYLLISIWLINFLYLHISQFFQTIKMEIEFLLEMIVDRRMHSFFLSLCYCVCLMMAFVNIITVYSENWFVFEYKFCQGTTNKGLTMLPKLSRIAPEKLLLNVQNILSIITLFTIFFGIIFAVFERKYINFRKLHFWISFMLCAVNCCVFQGLVFLKDILDNMEANGFANIVYVKANLENYESCCIMLIIALVADVIACLHSPACYNVTYKPVRNPDFTALPQKEVVSKELVDIVCINKEIRRLQKKDQHFKSSFIPLFIYFLFYIAIMVYLFNKAHSEDWLNIVINNNNHYDKMDDLNLSETTCDRDYSEYPLIVEPFRQILIETANSAVSSVELVDDSVKSTVLLGFPLVAILTLITFISHVFVPEMVPLLPVIAGLNIFVLPLSVFVLFAPIVAKAGSISLVGEVRIEEGMHAAMELFFLQIVYLILLATNAFPVAELQVTEEEVKEVAAEEAMSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY6</accession>
    <name>A0ABV2AHY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">40S ribosomal protein S4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">RPS4</name>
        <name evidence="11" type="ORF">MHBO_000923</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the eukaryotic ribosomal protein eS4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000186">
        <property type="protein sequence ID" value="MES1919049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06087">
        <property type="entry name" value="KOW_RPS4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.740">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="entry name" value="RNA-binding S4 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00485">
        <property type="entry name" value="Ribosomal_eS4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000876">
        <property type="entry name" value="Ribosomal_eS4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032277">
        <property type="entry name" value="Ribosomal_eS4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013845">
        <property type="entry name" value="Ribosomal_eS4_central_region"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038237">
        <property type="entry name" value="Ribosomal_eS4_central_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041982">
        <property type="entry name" value="Ribosomal_eS4_KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013843">
        <property type="entry name" value="Ribosomal_eS4_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018199">
        <property type="entry name" value="Ribosomal_eS4_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11581">
        <property type="entry name" value="30S/40S RIBOSOMAL PROTEIN S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11581:SF0">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN ES4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16121">
        <property type="entry name" value="40S_S4_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00900">
        <property type="entry name" value="Ribosomal_S4e"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08071">
        <property type="entry name" value="RS4NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002116">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00528">
        <property type="entry name" value="RIBOSOMAL_S4E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50889">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 11" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Small ribosomal subunit protein eS4 N-terminal" evidence="9">
        <location>
            <begin position="3"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Small ribosomal subunit protein eS4 central region" evidence="8">
        <location>
            <begin position="95"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="Small ribosomal subunit protein eS4 central region" evidence="8">
        <location>
            <begin position="146"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="Small ribosomal subunit protein eS4 C-terminal" evidence="10">
        <location>
            <begin position="225"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR002116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF16121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="31096" checksum="F935173FD00951B1" modified="2025-10-08" version="1">MGGCKKHLKRINAPKSWMLDKLGGIWAPKSSPGPHKLRESIPLCVVLSKKLKYSTTDHESKIIVKGGFIKIDRKVRSDKTFPLGMMDVVSIDSVGKHFRVLYDAKGRFILLPIDQKSSKFKLCRVKRVSKSRSTALSRRILGAHKSKNIPYLVTNDSRTIRYPNPEIKKNDTIKLNLETNQIEMFVKFNVGNKALITGGNNVGRIGVISKIERHLDSSDIIQLVDRKGETFATRLDNVFVIGEGTKSLISLPKRHGVRLSNIEERELREKRKATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ1</accession>
    <name>A0ABV2AHZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Serine palmitoyltransferase component</fullName>
            <ecNumber evidence="5">2.3.1.50</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">LCB2</name>
        <name evidence="5" type="ORF">MHBO_001147</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.50" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000248">
        <property type="protein sequence ID" value="MES1919291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004758">
        <property type="term" value="F:serine C-palmitoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050087">
        <property type="entry name" value="AON_synthase_class-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693">
        <property type="entry name" value="CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693:SF3">
        <property type="entry name" value="LD36009P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="4">
        <location>
            <begin position="112"/>
            <end position="472"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="490" mass="55385" checksum="9137CADA00DA37CD" modified="2025-10-08" version="1">MFFGCFPNKRIFYKKKNYVFEVNLLIRSFSTYFGLGLMIIIGNIKDFALHFKTQKNKNVAKLLSGFDDFFIRRMYRLGEDAWNRKIRSCPGDTFLVEDPLFKDRNGRPLIRKCINMGSYNYLGFASPQSPTLSSVMEAIETYSIGFNVPRGALSTKVVQELEYRVAKLTRKEAAAVFSMGFGCNSTFLPFLARKGDLILSDSKNHSSIVTGCFASSASTSVFRHNDSHDLERKLRKAIVEGHARTRRPWKRIFVLIEGLYSMEGYYPNLRKIVNLKKQYKVFFVIRKFYLFVDEAHSFGAIGLNGRGICDQLDVDSKAVDILMGTFTKSHGGFGGFIASSKDLIEEVKDKCAGYFESASIPPAVSQQVSAAMAEMESDSGLERLKRLRNNSNFFRSRLEEMGFEVLGIKDSPVVIIVVGAPSNIILFSRECLRRNIAVVVATFPATNLTESRVRFCLSAAHSKEQLDEVLFHIEEIGEMCCCRYKKHLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI60</accession>
    <name>A0ABV2AI60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000269">
        <property type="protein sequence ID" value="MES1919370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="154"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="23603" checksum="1E5D61EF266C77D2" modified="2025-10-08" version="1">MNEVQDKIDGKIIQSSSKEVDEGPLSVSERSDNNITDIDDSESNVIDELPVSMNEVQDKIDGEIIQSSSKEVDEGPLSFNEVQDDVEFNNDVANVSNDLPFSRYVAQNRIKKGIVGIIGVQDKNEVQVNDFEANNIDEVPVSINKDVKTDGKYNGNSPLSTSNQKNNIDPNKIYENKQEKMNNNGNFDTNNETEIINSENIDTKNSVFVITI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI63</accession>
    <name>A0ABV2AI63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001206</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000266">
        <property type="protein sequence ID" value="MES1919360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="15098" checksum="5B7F6521FF04D83F" modified="2025-10-08" version="1">MIFSSQKFYEISKMSKNRINIQTISASRHDHKQQQTIYPSRCRRRREKNQIHSAVQRFEIFLFCQMSENDLFFVPFREKQSANWKFFRICSEATRDDSFVYYSQSAAEEEQDRRSGGCFELKNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA5</accession>
    <name>A0ABV2AIA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001252</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000282">
        <property type="protein sequence ID" value="MES1919415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10669" checksum="B264E0F97A1E7799" modified="2025-10-08" version="1">MSRDLSKFIFVRNRLISASNTIGILKNSTIEEGAKACLLNKECASFDYAINTKTIYLNEKQNFPLWGENAWNGDIEAMHFMKKSFEPFLSNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE6</accession>
    <name>A0ABV2AIE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001288</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000294">
        <property type="protein sequence ID" value="MES1919458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="17002" checksum="BCC6F64D94866093" modified="2025-10-08" version="1" fragment="single">MKTKNGSKFKKLRLMIMSKFLIDQTSIKFYKRKRMLLFRFMVEKLNLEKNKYALKNAEMDNVALFYLLAKSNLSRENEEKNMIISKLKHKSCCLANSRDKLVLNLHKSQNRENDLKNLLTKYKNRKNGWAKIKRKTFSSIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF4</accession>
    <name>A0ABV2AIF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000297">
        <property type="protein sequence ID" value="MES1919460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="29539" checksum="1AAA2E280658C4DE" modified="2025-10-08" version="1" fragment="single">FNQNKIFTAFAFVYSIDNDTKSINLLKSEKITFKVQKNELKKEIFIKTNKNKLIFELLFEDFIGRDKKLQILNKFSPTVLTRKICPINANLQEKSKTFCSINSKTKKITEHFETVKNFKIEKCKIGNYKNSFSPFAKSINNLKVRNKNLNKMATFKQQNNFTQNNFLLIDKKEELKLSKNTKRVELKVIRNIVENSEDLPKIRRIRKKGNFRKFVNEIGFGMDKRKFEDKENIDPGMNVAAKKPIFDYRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII6</accession>
    <name>A0ABV2AII6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Cysteine desulfurase</fullName>
            <ecNumber evidence="9">2.8.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">NFS1</name>
        <name evidence="9" type="ORF">MHBO_001311</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.7" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000306">
        <property type="protein sequence ID" value="MES1919487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016454">
        <property type="entry name" value="Cysteine_dSase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF010611">
        <property type="entry name" value="PRK14012.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11601:SF34">
        <property type="entry name" value="CYSTEINE DESULFURASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11601">
        <property type="entry name" value="CYSTEINE DESULFURYLASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005572">
        <property type="entry name" value="NifS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotransferase class V" evidence="8">
        <location>
            <begin position="2"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="364" mass="40120" checksum="0A30C0F8655E0BDE" modified="2025-10-08" version="1">MFGWETEEAVEDAREKIAKLINAESREIIFTSGATESNNLAIKGMAEFYKSRKNHLIALQTEHKCVLDSCRFLETRGFKITYLPVLKNGLVDLKVLEKAIIPDKTSIVCAMFVNNEIGVIQPVEKIGQICKKHNVHFHCDAAQAVGKIPVDVRALNVATLSISGHKTYGPKGTGALYVRKRPRVRLVPLFSGGGQERGLRSGTLSPALCVGLGKACELSHNNLDQDYQHVSRLASKLLTGIRSQLDKITLNGDEKERYPGCINLSFSCVEGESLMMGMNKIAVSSGSACTSESLEPSYVLRAIGVSDDMAHTSIRYGIGRFTTEEEVDTAIRETVKHVNKLRDISPLWDMVNQGIDLGKIKWTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN5</accession>
    <name>A0ABV2AIN5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">WAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001097</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000236">
        <property type="protein sequence ID" value="MES1919238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="103" mass="11545" checksum="FB34F9DD453ED7BE" modified="2025-10-08" version="1">MISFDHKGKTITYNIKKRICTLADLHYHFGNFDAKLSTFCFVKESKNGPISAFNGIDKSDLAVSNVCCCDEECLPLNYPCSKNEFCCTLNCVKNICTGFVIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIS1</accession>
    <name>A0ABV2AIS1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BppU N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001011</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000210">
        <property type="protein sequence ID" value="MES1919147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="149"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="798"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="798" mass="87889" checksum="5AEF114417474B74" modified="2025-10-08" version="1" fragment="single">MAIPVNILKEILDTDLEKTLGKHILQGTTNTTFNFTLLKDGETLTLDGTEVISAVVIYNIRYETQQGKRVRVDDGNYVLKTGDSKYNITISGNEIVLPFAEEFTNAFGLCKLIIKIDNGNVIYTYSMNYNVDENMAYSPISTPNNLPTYNDVKQQVDALTADNQQIKADLTQAETDIAENEQNLNDKADKDLSNIPEFDTAADGDMFYKKGGKLDVAPLKINDATKVISSPYSIEVPPNTLHIGDNTSLKENGGFLENHTRTLDKNYLMLDYENDPQTGTKKPIYYARGAMERYEDQPNSSTVMNNVNIINLGTPSFDHQAQAIYFKFVNAVNKFKMKININGNDVAYYPSKTAWNDDAEDGYNVGTNLQKITLEPFWSHLVEYNMRLYIKADSQINLLGNGTLPYIALDINRITRHNIALADDITGGETAEDIRNKLQTLTGDDRLDASAVKNLPSGGTVDNTYLTFKKSLGVTALNKTGNTINANTFVFVSPQPDGTFHMQLITKNTKYSGELFGMLRVSTANNNTGDVQLIATLQTGVTAASEGMGAWIGFDSDIPGDNSISINTKDQIPQLFGRCGVFGAVNSIGEYNASFNALEVQSSYLVINHHDKDIDYHSSLPTTISTEALFVYLHANLTTGGQGTIFQQLPALSDVVKGTQIWVNNESTTESNKVTLQANGTDKINNASTYDVLGQKHKVLLVATSNEWSVFYDSSTTGTYDDTQVKADIAANKSEIERLKTDISSGGLPTYVFRDKGVPVLPATSTQNYKAYYIHSIVLPDSTQVIDIPSGTIEDTIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV4</accession>
    <name>A0ABV2AIV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Germinal-center associated nuclear protein, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MCM3AP</name>
        <name evidence="2" type="ORF">MHBO_001040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000218">
        <property type="protein sequence ID" value="MES1919177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045107">
        <property type="entry name" value="SAC3/GANP/THP3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005062">
        <property type="entry name" value="SAC3/GANP/THP3_conserved"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12436">
        <property type="entry name" value="80 KDA MCM3-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12436:SF3">
        <property type="entry name" value="GERMINAL-CENTER ASSOCIATED NUCLEAR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03399">
        <property type="entry name" value="SAC3_GANP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAC3/GANP/THP3 conserved" evidence="1">
        <location>
            <begin position="4"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="891" mass="106171" checksum="29891D2E00774106" modified="2025-10-08" version="1">MCNLISAYSDNPKRFPNEEKFRALNILLMAHLWNSSEFKEFPSELKESKHIQLATGIFNSIKKKDPIKFFRLLKKKCGFFEACAMHQYIPLMRFYLLRKMVKTKNCSVEEFKDVGFFGSIDETINFVNENNVSVIGNQILKNDFVSNNKKYELRPKPNKFWTNTQKTQFLDFFISKFSLSQIIFSSDKCNTENEFFAFIKEPTPFKESQNFKLLPNLTKFNEKDYIENLDDEKDFLSKFNENKKIRKTEISKNLKITNRKRKNEFDVLSNVKKFSADNILNEKSENLKLKFSNKKIDNKVKSQDFIQKAKIFTKFSNFVYKNDENFNKNNNNLNDIGDKLNKNDEKINENGVKNTETKKYLKIKKTKFYENVKILRKNRTKFYSKILKFCKNNKKFVNENGGLFLKEKFGVLFCGRRNLSNKRIGKICRYFLTENSFLISSNEENSQNRNDHNFAMSIKFDHDNYNQNLIVFSPLIRTKKRIKRLIESIFDRFDKNQYQSLIRIHIIICLNTKIKKIDKKKIRLKLLKFSQKISIGFLDISNFNFIEQFHLSLFKSLKPIFRKKFSSENDFLTTQQKIAKNLIKLQILNLNNKVKNLFNSEKTQNFENLAKTFNQSLAETLRKTNIFLAKPKYFHFKAKMNQNFVFVNRKSAKMAKFYLANFFLSKIDYFDLKKLLQILEKAIIPFRLNGNFQKIDLIFMLELADRFLLQIYPNKNMKNFLYKKLREKLKTIFLMDDLKLFIYFFKFARKEKIDFSDQIDEKIIFDEQSFLLNVTKNNLPFQIFTECTSIHKKTFEQLNLAKFRDLAKMYCCFVEFAKIAMTFLQKQFSKLFSDKNFEKSVIKNNLSDFSDKLENYILTNAENNGNFEDFCDFWMAFIGEKICFDCGFGDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ6</accession>
    <name>A0ABV2AIZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001446</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000356">
        <property type="protein sequence ID" value="MES1919651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="9001" checksum="9BA2EB0F14B428BF" modified="2025-10-08" version="1">MSEEHIFGVRQRRMNRNNSEDATELTPLNWNEFFDTKTFLKIDRRKNNNGDEEEKEAAENFCVYEAGKVEPGKVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJH7</accession>
    <name>A0ABV2AJH7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001339</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000315">
        <property type="protein sequence ID" value="MES1919523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6131" checksum="3284982A9C841727" modified="2025-10-08" version="1">MEEVVSNSLFLIRVMSALNCPIIVTEQYPKFFGRTGFKIALLSSGTEIRLGRIAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS8</accession>
    <name>A0ABV2AJS8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001674</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000446">
        <property type="protein sequence ID" value="MES1919930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14125" checksum="73C7EA7AA41A08EF" modified="2025-10-08" version="1">MQMLFEEEGTSETDSYSEFNECNCNNKECANCGTFIGKQNFAVVSVTKSGKNDEETNYFKKDPEKTGFRNRNVSVSAGKPRVEIEMTENTEEMQMASEILNQIDNELKISRDINSLYSLIPIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK36</accession>
    <name>A0ABV2AK36_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PIG-P domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001759</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000483">
        <property type="protein sequence ID" value="MES1920030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052263">
        <property type="entry name" value="GPI_Anchor_Biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013717">
        <property type="entry name" value="PIG-P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46346">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46346:SF1">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08510">
        <property type="entry name" value="PIG-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="PIG-P" evidence="6">
        <location>
            <begin position="13"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16116" checksum="285B9927D41AEC6B" modified="2025-10-08" version="1">MINHQNMQRKWSAYGFVAFVVICSFYTLYFLWALVPDEFLNKIALNNLPDKHWAIIVPLNMIVFPLIISCLYITRNLHKTLPLDSMNTICDEFSFPEKHAKNLETREDGEMFDLPLSYVNKKMFQNRPSCFSETSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK66</accession>
    <name>A0ABV2AK66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Zinc finger CCCH domain-containing protein, variant 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PEI1</name>
        <name evidence="6" type="ORF">MHBO_001791</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000501">
        <property type="protein sequence ID" value="MES1920071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045234">
        <property type="entry name" value="Unkempt-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493:SF50">
        <property type="entry name" value="RING FINGER PROTEIN UNKEMPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493">
        <property type="entry name" value="UNKEMPT FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13920">
        <property type="entry name" value="zf-C3HC4_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="378"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="425" mass="48622" checksum="CF1F2D03070E4F22" modified="2025-10-08" version="1">MSIFTCTNTKRSLAPPTPQSTPGFSATARITTTNTFANRNLKERRRNPLEYDYSWIFCPAVNPSSQSKMSAFVEAKFCRDGDNCKKAHTIFENWYHPHLYLTTLCYRGKGCRSGKMCSFAHSKSDLRPTTMAVISNYENCRRHNKNTKQKPEAVVEQTSLNVDTLKERYQKRKKFEKKMDLVPKLEQTTQKQLDKISADLLNLDVGKLKPANKIVVKKRKNKKLSFVFKNSRLEDCKEALSKIKTKAADCSFKSKFDRNKTIENNYISGKLGKREESKIDDDEDIHSEVDRLSALIRAETLSLLKFAVKFIKGVNKRLSDSNVTESEIEVSGLARVKEALLVDKLISEIMGTRNLEILKNRANYHDELLKSLSKASNCQGCRSKVMKKCLVPCGHVLCEVCEMKLLRKKCPFCTKKIKSLKKIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK77</accession>
    <name>A0ABV2AK77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Importin subunit alpha-1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cut15</name>
        <name evidence="1" type="ORF">MHBO_001800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000504">
        <property type="protein sequence ID" value="MES1920080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032413">
        <property type="entry name" value="Arm_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16186">
        <property type="entry name" value="Arm_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11389" checksum="BD8BD7A62F44F35E" modified="2025-10-08" version="1">MSNKDVRTSTVALEGIFNLLRNGENIFTKENSPNLWANAVEEAGGLDKLENLQTSENPSICLKAGSIVERFYVGDDGVDELEPAVKEDAFSFGEVNSGGGDLFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC4</accession>
    <name>A0ABV2AKC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001829</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000517">
        <property type="protein sequence ID" value="MES1920113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="22705" checksum="F86F9CFD7DABB4E0" modified="2025-10-08" version="1" fragment="single">MISETQNLSVFAVVVPVLLSQNEYCVYDSELDAFLPKIFAILEQSLNLGTSQVQTESKMAIKTSFEVLSEYANALSPFLLAEIENLLYLIQKVNLNDIGITGKALNLLKALLNYRIENFECYVKMNEFAIKYISLETPFLATLSCDYFNIVCYKSPKSVLSILNILIKKLVNVIPFTDEMIKLVLEEQEDFDNKKQQFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL76</accession>
    <name>A0ABV2AL76_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002085</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000658">
        <property type="protein sequence ID" value="MES1920417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PROTON/GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865:SF7">
        <property type="entry name" value="PROTON_GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046475014" description="Amino acid transporter" evidence="8">
        <location>
            <begin position="26"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="111"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="147"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="334" mass="37601" checksum="F02CB7B05B0AD7B7" modified="2025-10-08" version="1" fragment="single">GFVLLSVFVNTITIVVMKFLDPSEGIDIESIGGQINIDSNSTLIGVAEMIRKIAFYIVPENFVNSLIQNNVMGTLVIVCFIAKNMAAFSKTKGIKSFQSFIDISLSSVKEMLFPILLMTPFGVFSILCVQMVKTKDLMIFFRMSNYYFVYLIANTIFMLFLISIQILLIRWEFFVYAKKLIKPTLKGFAIASSAAVLPEIIDSISENNESENKAIFFLSLANTLQKTSTNIYFMVTVNFVTKVMGKPLSLTGQIILAAINIPMTMACPPVPMASAVYLGIFVQLFDLKMTPIMLSLFIAADPLMDRLQTFFNVCGNFLLYKICLSFSKWWDRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL77</accession>
    <name>A0ABV2AL77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001773</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000491">
        <property type="protein sequence ID" value="MES1920047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002554">
        <property type="entry name" value="PP2A_B56"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257:SF3">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE 2A 56 KDA REGULATORY SUBUNIT GAMMA ISOFORM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01603">
        <property type="entry name" value="B56"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="17"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="96"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="568" mass="65256" checksum="B7976FBA74467366" modified="2025-10-08" version="1">MKKAFYNLKNKIKNKKSQNSISQNSSSSRKVKQKEISTSNSIKQQNQQNQQNEKMDNKTEKLQNQQNAKIEKIEKMDKTKQIQKLKDEPKNENTKKSSKQNRHKNFQNRIEKMKRKNYSQMDILNSNFTPFCQNVPREKEFFFVKMCRLVAVPFSFSKHSPPFYVQARRTKGSVLHEIELIAAAPLGWLTASAAEAFEQTLTQNLFLPGNAISPPSGDAAFGGFFSPDWEHRLKLYGALRLFLKNESADRKLVDLICSERVTEFLFKQLVFAQDERERNAANRALWQIFDRSPAKKKSEIVAKTFDFLEEAISAFSVKSKLGANAKTNSGRIPTARCDSGEPIPGIGALFDFLSQLVPTWKKPLALDKRRCFRNLVLPLVELRTREMMMESPRGVIYSFLESCFDLVVDAFAAAVRWKLDDAIFGFKVISLSLRSFRSLKRRTDLDLKAVDDKLALAVVGKIAEGAVDSNFRVADMAISLLSDDIMLPLLFRNEERGLHLLLNKLYQNQSHWCVAIRMESEKTIEAFAKTDSEVLGPMTSKFENNQVEKLVDKRRKEWQLLERKRIDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL98</accession>
    <name>A0ABV2AL98_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001926</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000564">
        <property type="protein sequence ID" value="MES1920234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="351" mass="40279" checksum="7E7D437202536A8A" modified="2025-10-08" version="1" fragment="single">MRRFHKFDDTKLRLETNVLSLGDLSGKQLSQKFKNRLANNSVKLAKFCNCLSSVLIKNVYIFVTVYKMGGSTTKLNYKLAKIKNGEFTVRNLTEVKISNLEDDLISIEISKNQSGEYLHCYVQFDKTLFYNKLKVGINEKKLLLTSKSTKKLNVKTGSRAITNFVNDTNTHSIAILTKDYNIIIWGAEKDIFVLHQCQLNIPNLNKISQKSAKIIKIGKSGKFLISALKNNLFVVDTKQKEKTLTATKLNLENKNDLFCIKTDDKNSDRFFTACSDYIKIFDVNNMSSSLMELKHYLKSPIIKLKQFWLKSSKSKLDNFYLFCANSLGDYIIVRIESDSNKNSFTHFFIPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA8</accession>
    <name>A0ABV2ALA8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002109</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000673">
        <property type="protein sequence ID" value="MES1920440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="147" mass="17510" checksum="92D69936FD5CC822" modified="2025-10-08" version="1">MIKHFVHFNLSNVLIREKRHFEIKMNTETVLKLLYFLEVPFVFDGAIDEKSIFEIKSTLKPGRKYDFSLNCNWNKFCFPRLVSDNARQDQFYVFLEKFVKSRPNFGFSLKVDYSYKQNVFCDRAIELSSVVKILNAIFSVSVDEYFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI4</accession>
    <name>A0ABV2ALI4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001948</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000574">
        <property type="protein sequence ID" value="MES1920258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040000">
        <property type="entry name" value="NOP9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001313">
        <property type="entry name" value="Pumilio_RNA-bd_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13102">
        <property type="entry name" value="NUCLEOLAR PROTEIN 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13102:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22493">
        <property type="entry name" value="PUF_NOP9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00025">
        <property type="entry name" value="Pumilio"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50302">
        <property type="entry name" value="PUM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="275"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="439" mass="52264" checksum="1785B84497085D38" modified="2025-10-08" version="1">MSVELLNVKNHQLKQETLSYFRKIQNHFDQKLDKYFSYSDPDFEILLRSVFDEIEGNEESLLLNRHTSRTLEILFKTTKDLKKLLKFFLVVSNRFLDLSRGRCSSHPLQAILGRFGELKLEKNEMATFYDEIKKILNKFVKNFFVLSECQFATFVVRDIIKIFPDLFDDFDLKKLKIRENKRIEKRFCVKLTRKIIKLKSVFDKCRNKHFSPVLSTLISKMSDGTKRDRKYVRKLCEKIIFNNDFILLCCNPISSFLAQTILTKSTEETMNEITKIILPKIKFLSLHKNGNFVVQSIFQNKNLSQKTFLAIFNELKPHFKNLLDENKTLIIAKMSEFCTKNEETQKIYYEELAKIFPRKTKNICLNFLFDFAKDRYNLRKWDDYLTTKPSYPGCILLQNLLKFDPKITISVIKRRTFVLYCHKSSFKSFYKCINRSKQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL3</accession>
    <name>A0ABV2ALL3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NadR/Ttd14 AAA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002189</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000719">
        <property type="protein sequence ID" value="MES1920525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038727">
        <property type="entry name" value="NadR/Ttd14_AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053227">
        <property type="entry name" value="TRPL-trafficking_regulator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34932">
        <property type="entry name" value="TRPL TRANSLOCATION DEFECT PROTEIN 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34932:SF1">
        <property type="entry name" value="TRPL TRANSLOCATION DEFECT PROTEIN 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13521">
        <property type="entry name" value="AAA_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NadR/Ttd14 AAA" evidence="1">
        <location>
            <begin position="26"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="247" mass="28373" checksum="AFF936633B856F42" modified="2025-10-08" version="1">MSNGIIVYPDNFENFQLAITSLQINNEKIFSEFAESVALKNEKDVVVLFDRAIIDGSAYCSDEEFQKMLCRLSRPKKEEILGYYDAVLYLVSAAEGAEDFYDKIGVRYETAAEARDTDKRTLDAWKKHKNLIIFDNVLKSFETKMREVVDAVCTLLKIPLTAKLPRKYILADPSNIKVLLTPRKLKFPSNVLVKSVTIEKTFIKNSGQKEDNEMYTFLRHSKSNDVSRYTLKKGLQIFRSINDLSLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL7</accession>
    <name>A0ABV2ALL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002222</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000738">
        <property type="protein sequence ID" value="MES1920563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="342" mass="39384" checksum="565328EA66806CE9" modified="2025-10-08" version="1" fragment="single">MNCSFVIFYMNHINYSYNIISFSLLMHEQKRFPCQKKQQTSYAISNGAKFCNLYKNHYYKFTTKGREWIDAVRGCLQSALVPLLRPFLSITCDKIKEKAFQSHTSCYVYPRRLSPSFCDLTLSDNMKIFYTVGPGLLSNCLQYPTLCKDIFLSIKQLLDVRKACKVRQEILSSENNIKNIQMIYVGLNKEARPRRAVQQEDDYSAGARLIITVAEKMKWESKGVTWIAYFQNNITAEENEQNVRQYLNILLAPSKLYNLNDKTNISSDVNMTTIVDEVTNAFRTGNLTSKMIKGISIAKYRVCADYECSNMTLEFDPLKNTIVSESTPRFWSITKVVLIVSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ2</accession>
    <name>A0ABV2ALQ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Rhodanese domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002247</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000755">
        <property type="protein sequence ID" value="MES1920590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00158">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="entry name" value="Rhodanese-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="Rhodanese/Cell cycle control phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="259" mass="30748" checksum="6295EF6FD331B954" modified="2025-10-08" version="1">MQRTQKRFFCKAKNAIYPMMQLNISSVKEGFVDHFFNSEKYNHLLPMEPLERDRFRWKSFKPIEKLNIQKDLDSIVFTKKQIMDLIPGYPVNPDYTRYLPIEVERLLNDEKTFIIDIREPWERKLAKLEKNDRVFEIEKSKFEFLEHSNVWGNFKSVENLLPTIFSDRNLNFTVVCGDGQYSEFFCALLYGHGWHNSSVMLGGINGLLETAENKLLFESDKRSCYDPHFDIMKSIIVDLKIIEFKGKMIKVFSNDEDYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS8</accession>
    <name>A0ABV2ALS8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CUE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002279</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000775">
        <property type="protein sequence ID" value="MES1920627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="19644" checksum="B54DEBEF50F3E226" modified="2025-10-08" version="1">MASNINNFEEKLNQFAQNSYSENSKKFSKLSKLTGFKLKMNDDKMNKINGIKAIFPDLTDNFIIKCLDCFNLDYQKTITAILDNQLPPDLIKLREKSKLDYKKDIWDWKPKFENKKLLKILNQKNENFEMKRNTEKNYEDDFQEDEHKIDFGISNDITLDERLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ3</accession>
    <name>A0ABV2ALZ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">RPB1_1</name>
        <name evidence="10" type="ORF">MHBO_002326</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000802">
        <property type="protein sequence ID" value="MES1920680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.2940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045867">
        <property type="entry name" value="DNA-dir_RpoC_beta_prime"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007083">
        <property type="entry name" value="RNA_pol_Rpb1_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007081">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007075">
        <property type="entry name" value="RNA_pol_Rpb1_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007073">
        <property type="entry name" value="RNA_pol_Rpb1_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038593">
        <property type="entry name" value="RNA_pol_Rpb1_7_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038120">
        <property type="entry name" value="Rpb1_funnel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376:SF37">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05000">
        <property type="entry name" value="RNA_pol_Rpb1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04998">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04992">
        <property type="entry name" value="RNA_pol_Rpb1_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04990">
        <property type="entry name" value="RNA_pol_Rpb1_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 10" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="9">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="8">
        <location>
            <begin position="62"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="7">
        <location>
            <begin position="128"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="6">
        <location>
            <begin position="397"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="561"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF05000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="561" mass="63184" checksum="12744B61D5B675C4" modified="2025-10-08" version="1" fragment="single">MVDAGSKGNIINICQIIACVGQQNVQGKRIPYGFKDRTLPHFKKDDLGPESRGFVANSYLEGLTPQEMFFHAMGGREGLVDTAVKTAETGYIQRRLVKAMEHLMIQYDGTVRNSLGDILQYLYGEDGIDGAHVEQQVIESVWMNKTEFEKTYVWNKSDLRAAVQSEVFEAISQNAEDDELLEFEAAQLRKDRLFYRENIAFLNDYSRSVYLPVNVERLVSNSQKIFSISPRTRSDLDPREVIRRVQQLCEQCVAVRGPGRLRAEARENATILFRMQLRSSLGSKLLVARRRLTTQAFSWLADEILGRFRASLAEPGEMIGTLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLRELINVSKQIRTPGMTVHLRPELSHDAARATELLNKLEHATLRDITASAEVYYDPVGAPTIVEEDAEFLQAYSDLPVFGDDEAADPEELSDWVLRVTLDKKKKQTKGISNQEIADRINAEFEGDLNCVFNSDNAETPVLRVRVVGRGSEEQEEMLQRLGSQDDAFLRKVSTNLLARMALRGVRGVTKVFMQKVQRRGFSDRMVIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ6</accession>
    <name>A0ABV2ALZ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">THIF-type NAD/FAD binding fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002334</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000807">
        <property type="protein sequence ID" value="MES1920689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953:SF5">
        <property type="entry name" value="SUMO-ACTIVATING ENZYME SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953">
        <property type="entry name" value="UBIQUITIN-ACTIVATING ENZYME E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="Activating enzymes of the ubiquitin-like proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THIF-type NAD/FAD binding fold" evidence="1">
        <location>
            <begin position="13"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="374" mass="42917" checksum="62F1365EC84171C1" modified="2025-10-08" version="1">MTLFGINKNNNFQHILLIGAGGIGGELLKNLSIFNFAKVTIVDHDKIEASNLPRQLYFRKSDLNFSKIAVLAQKLKSSKLIFFENDIRDFEIHFFDQFDLVISCVDNIETRRYTANLLFQKYLFCNIKIPFFDCGSEGFAGQLRIYEFDKGPCFDCTKELFKSETDSYPLCSKNLSFEEAVLATKKSLFPSTPKEKLSILQIEKIHEAIMTKKPSLHSKFNSLEKTKSLLKSVVVPTLNTTNSIIAGICSVQIKNFGNNRNNLFTFNGEKGAYFANFELRKNENCVCANFEKICLKVKNGKGFGIPFLKKNLKTEKNDFIKFYKSKFGQTDYFCLEDSCRDKILRDRFEELIGTNENFMIICKNKICFVNLAKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM14</accession>
    <name>A0ABV2AM14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002349</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000816">
        <property type="protein sequence ID" value="MES1920706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="9730" checksum="CC9F003EFACBB024" modified="2025-10-08" version="1">MAIVKDVRVNEFFFDLRKKEQSPKDFALTTTDFLFKIVNFSKALTVADQIAEIKSISSSVVLIKRNGSPSKLKNLLLETFSCEDLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM54</accession>
    <name>A0ABV2AM54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002374</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000830">
        <property type="protein sequence ID" value="MES1920733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040004">
        <property type="entry name" value="SMCO3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35972">
        <property type="entry name" value="SINGLE-PASS MEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35972:SF1">
        <property type="entry name" value="SINGLE-PASS MEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="26339" checksum="39846DE06A4AEEE7" modified="2025-10-08" version="1">MSLVEVFYPGNQKKREHCVRLMQEIYSAMERNFDATNDLIKIMHTHLKLQCDPLVLFKGKTIQENAENFSQKIREIQDLLRRPLQKCVNKIDPYIYKMLTSEELELSSIYEYLRIGGKTLDFGAQILLLSVAVAKTILHTVRKIVTRLGRLWVGTIILGVLLAGAIYSAIVGARERAMLESTEKELQGVVDTFVPESLRYTKEINRLEFKIEALQVNAVFHRLVYYVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMF0</accession>
    <name>A0ABV2AMF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DnaJ subfamily C member 25</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DNAJC25</name>
        <name evidence="2" type="ORF">MHBO_002460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000894">
        <property type="protein sequence ID" value="MES1920830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045493150" evidence="1">
        <location>
            <begin position="21"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7294" checksum="C4C7E8C7EC404FEC" modified="2025-10-08" version="1">MPRKGIFALVLFFLLKQTCSFPSREDFMNNWCGDENCYDLLEVKNSADKEDIVKKYKQLAIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH9</accession>
    <name>A0ABV2AMH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002487</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000918">
        <property type="protein sequence ID" value="MES1920866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="330" mass="39010" checksum="EE21028CE87EFFCE" modified="2025-10-08" version="1">MFEKIDIDQSTSMKNREIYDFRIDESDDLQNESFEEDIKLKIKDEQTPEVKEKQSETFKDIKKSIEELKFGQNEVITENNKEIEKIEDELNKNFNNKNGILENETSLNKTYEIYQLLNERIMALSYCLHLKIPLIEKCADKLTKIRKENFEKTDLKSFEEKCKLVKIEANNIFADTDDDIFDLNEFIKLLILAKNLDFDMYKKNYITESIPTLIIPLVGHFFLNIDFKDENTKQILQNFTTNLAKLDNFPKIDQTESVLKKICEFVIFPFFKEISEFEWNIFSLSNTIEILNIFDIIRSSLLKTPISSSKLHIFIISKIEKSLNSHFIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT3</accession>
    <name>A0ABV2AMT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002561</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000981">
        <property type="protein sequence ID" value="MES1920961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21675" checksum="F92FCAD77BBA3D86" modified="2025-10-08" version="1">MNNGNNNKTKLLSKEIFTKKEKSPISKNKIETQSYQNIKLGTTNREFRSEYKNAKGSKEIFDENLKTDNSRKRETNDCLRSEMGNVRAQSNLIKSLNEINVSEKNIAKKNEKNIAKMDKKFNAEKTFKNLNSESKNEVLKKLEKEYKIEKDKKSPNKKSKKDNLPKKEFLKGKNRFRIFENGLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ2</accession>
    <name>A0ABV2ANJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Piwi-like protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">PIWIL2_1</name>
        <name evidence="4" type="ORF">MHBO_002786</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001169">
        <property type="protein sequence ID" value="MES1921226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.260.10">
        <property type="entry name" value="paz domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003100">
        <property type="entry name" value="PAZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036085">
        <property type="entry name" value="PAZ_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003165">
        <property type="entry name" value="Piwi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22891">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02170">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02171">
        <property type="entry name" value="Piwi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00949">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101690">
        <property type="entry name" value="PAZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50821">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50822">
        <property type="entry name" value="PIWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAZ" evidence="2">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="Piwi" evidence="3">
        <location>
            <begin position="318"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="153"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="473" mass="54623" checksum="C05180AC23080997" modified="2025-10-08" version="1">MKEMFETNKNQKIAKKRIEDMIVDNVVITIHNRRLYRISEIDWNATIDDTFLKDGKKISYRDYFKNTYKEDCNLELKGMLVHRPRRRKNSTAAEKIMLPPELCHETGLSKKLKSNFQLMRKIADTTRIPAKKRHSLRTKLVSRLQKAIGAENSYDTDSNEGSQKGKDGVVGSSSPTREVVAAGSAITVESQIPIILSHKPVKLQGRILPEFKVSIADMNKNIRAVDPYTELQSGWNNAQFINKTIYKIRNWAVMGEDKRTMDQCVSQIRNVAQNANLLNTYISPNPQRYFVPNDRSRNNTNNWRKAIESVIEKDKPNIILVVLPDDRYGNPTAIYNLVKTICCTEKPVLSQCITRRNIMNQKRAGSVFKGCVKQMLIKMGNTPWRADLSVPDKSINMQEPTMICGMDVNHDMRRNCSTVSFVASYTSDYTKYNTFVYHQSFGREVVFFRLYMFDCCHKKANFKLLFELLYCFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK5</accession>
    <name>A0ABV2ANK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002516</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000940">
        <property type="protein sequence ID" value="MES1920902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="193"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="292"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="326"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="352"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="398"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="461"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="497"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="544"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="624"/>
            <end position="641"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="657"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="657" mass="74380" checksum="432F36369BE75310" modified="2025-10-08" version="1" fragment="single">MSIEYAYKDDIALNASNDTKSKELKIDKIIEEKEFVEMESVNSESASMICLVTAYKVLCLLPISIAAVVIFVGLKVNAENLSCNYLSIDNAISNGSSCPSNPTNVFLGIHRLAISAVCVIIVIVCTTSSGPSVIGYQEVSEMMKFARMSLMCGLAGKYGMLSAVHFLLTFFSVTIVFVEKLPVRNMPIALPSFLFYGATAICSSFFFLFLYWIVNAECTKQYFEITDLVIPDYMVQSRKCCFEVKKQDSRGESTLPCKNSLLVVLWFLYCGLCLTALIFVLKDISAQEELKFATTFLRVVSSLISIGKHIFFILQVIQFPHTVAENLLMHAITGYFELYFLLEMAVSMPEPLLISAIVFSWLLNLYCFVYLAIEGKLKAIKTSIKEKWKDLLFRQHSVVYLTTLSTCVACAIVLVSFVKRFFESNVFDDAANYSISWCASIINDSEVTDSLTSFYPGKSSVIYAEIITMMMNIEPQLILIGLSLVNLFGFRLSGYMNLFWTVDIWALFLSSLVMLRIDSFQDGMEKLGDMGYAYLGSNHDSVRVMVESRCCVVILLWVLVAYSLTDHERQNIRSYEFQEKPESRNAENLIDQPIPDELKLVNDGEEISEDELEMEKDWFNCSKTFVYVVVFVALFFTFLSWQGNFSELKMKDFANYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP28</accession>
    <name>A0ABV2AP28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002963</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001343">
        <property type="protein sequence ID" value="MES1921432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="16"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19755" checksum="15CF0AD7F6C9380F" modified="2025-10-08" version="1">MEDKIHFEISTQERLLNQQKLKEINLENKKNLLETEKRELERLETYYESKNVTETNLKKELESIKEKRANISLTNKKINQKSIKVNKNMNDIENFLNSQKCLNLDNGKFKIELEEKVNLNRLKETKIGSLKVKIGILNDENIEASKELQNLMIEYKSICNFLKLVKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB4</accession>
    <name>A0ABV2APB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="21">Exonuclease 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">MHBO_003046</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the XPG/RAD2 endonuclease family. EXO1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="19">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001437">
        <property type="protein sequence ID" value="MES1921520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09908">
        <property type="entry name" value="H3TH_EXO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd09857">
        <property type="entry name" value="PIN_EXO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.20">
        <property type="entry name" value="5' to 3' exonuclease, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1010">
        <property type="entry name" value="5'-nuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036279">
        <property type="entry name" value="5-3_exonuclease_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037315">
        <property type="entry name" value="EXO1_H3TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008918">
        <property type="entry name" value="HhH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044752">
        <property type="entry name" value="PIN-like_EXO1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006086">
        <property type="entry name" value="XPG-I_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006084">
        <property type="entry name" value="XPG/Rad2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019974">
        <property type="entry name" value="XPG_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006085">
        <property type="entry name" value="XPG_DNA_repair_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11081:SF65">
        <property type="entry name" value="DNA DAMAGE-INDUCIBLE PROTEIN DIN7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11081">
        <property type="entry name" value="FLAP ENDONUCLEASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00867">
        <property type="entry name" value="XPG_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00752">
        <property type="entry name" value="XPG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00853">
        <property type="entry name" value="XPGRADSUPER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00279">
        <property type="entry name" value="HhH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00484">
        <property type="entry name" value="XPGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00485">
        <property type="entry name" value="XPGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47807">
        <property type="entry name" value="5' to 3' exonuclease, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="PIN domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00842">
        <property type="entry name" value="XPG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="14" id="KW-0234">DNA repair</keyword>
    <keyword evidence="12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="9" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="15" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="16" id="KW-0802">TPR repeat</keyword>
    <feature type="domain" description="XPG N-terminal" evidence="18">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="16">
        <location>
            <begin position="96"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="XPG-I" evidence="17">
        <location>
            <begin position="138"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="SMART" id="SM00484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="SMART" id="SM00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="MES1921520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="21">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="321" mass="37168" checksum="2A7F020CA9E7104C" modified="2025-10-08" version="1">MGIKGLLPLLKNIYDEINIDKYKGQKVAVDTYCWLHKAVFSCSYELVLGRPTTKHIVYCVNRVKKLLALGVTPVMVFDGARLEQKADEERERRKKRRENKEKGMRFLGKGNIKEATKYFQRAVDVKPEMAHQLITELRKLNVECIVAPYEADAQLAYLSITDKVSCVITEDSDLLVFGCKAVLFKMDSAGNGTEIRLEDLGQVSSVKFLSNFSFGNWTQRMLQEMCVLSGCDYLPSIPRIGLKKAYNLIHHYRNLEKAVRHLRHEGKYDVPDRYEQRAERAVLTFRHQLVFDPSKRDQTNLREIPSYLFKKELTFLGEFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APD1</accession>
    <name>A0ABV2APD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001465">
        <property type="protein sequence ID" value="MES1921538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="22693" checksum="43D7F0755D3D96C4" modified="2025-10-08" version="1">MLKIRQIGSVCKRKNRLFLFVNFRLFAIRKKELRILRRKSKREEKSVSREPYSIVKDRYSQKKVKFDVFYYVLSYSSLFIALAILIFMARYYYRKHRTHSIINEARLTINQTKNHKNKRYFLPRNAQIITKQTKTENDYFLHLLTPIKSGSNGQTAFLSLKINNSEIKFKTTEIQILENNKIFNVLAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP2</accession>
    <name>A0ABV2APP2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">phosphomevalonate kinase</fullName>
            <ecNumber evidence="2">2.7.4.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ERG8_1</name>
        <name evidence="8" type="ORF">MHBO_003031</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via mevalonate pathway; isopentenyl diphosphate from (R)-mevalonate: step 2/3.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.2" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001423">
        <property type="protein sequence ID" value="MES1921504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004631">
        <property type="term" value="F:phosphomevalonate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035102">
        <property type="entry name" value="Phosphomevalonate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31814">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31814:SF2">
        <property type="entry name" value="PHOSPHOMEVALONATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="147"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="26465" checksum="30211615CE4136EC" modified="2025-10-08" version="1">MRIEVSATGKVLIAGGYIVLEKEFKGIVLPLTAKFHATIENKTNFEYNSTENNNEKLIFIETPQIEFKKYIYSYKRNSVSTELILIKNDRTEKNKFIDSALNFSFKLLNELIRQQKILNFDEMLNHIKITLFGDQEFYTKTKGKTGLGSSAALTASLVSAFILFFVKIAKIKIDGKKLKRFCCLVAIFAHSKAQGKIGSGFDIVSCFYGALFYQKLNENFTENLSSFDLVYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP4</accession>
    <name>A0ABV2APP4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Structure-specific endonuclease subunit SLX4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003163</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLX4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001574">
        <property type="protein sequence ID" value="MES1921635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018574">
        <property type="entry name" value="Structure-sp_endonuc_su_Slx4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09494">
        <property type="entry name" value="Slx4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="28935" checksum="4D193E203C7114B8" modified="2025-10-08" version="1">MADKKTEINCLKAKIRKMNSQIENLNKEKAIFVTKLNKLQNLSNQNNKKKSELSPVSFAIYRNEQISEIRSFSMLQLKEKMAENNLKISSKEAMVNLLIKIWDANHPDKSYTPSRWGLPPPNLLNTSAQKREMPSHNSPIKPQKLNFCSTSFDRSILKQNKNDKTEKTEIKKIEYFKMLKKHILSDDQLFEDILLFKTFEISDFVKKMKEKRANVHKKLILDYLDSCGVSYKTKRDTEWINRFNIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS8</accession>
    <name>A0ABV2APS8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DEAD-box RNA helicase Q domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003219</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001632">
        <property type="protein sequence ID" value="MES1921688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="6">
        <location>
            <begin position="72"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="72"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15519" checksum="7085FC6A229CAEC2" modified="2025-10-08" version="1">MSYGDSNFENSFGLKLKKIDWSKADSSRNDSNNKSFHQISEEANLIDKKNVKEFRNALGIKVSEKDTPNPVIDFQMANFPSFILEAMEEKGFKKPTPIQSQTWPIVFAGRNMIGVAETGSGKTLAFALPAIRNVLSLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU4</accession>
    <name>A0ABV2APU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003231</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001647">
        <property type="protein sequence ID" value="MES1921702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7652" checksum="6F825E9E1CB567BA" modified="2025-10-08" version="1" fragment="single">MRTIKIELDTARQDERIEVDGILQGNQNVEFEVRLAEDGEPIAIADIKKPKIIWRYTRIGVATTLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APY5</accession>
    <name>A0ABV2APY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003051</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001441">
        <property type="protein sequence ID" value="MES1921524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="25993" checksum="0C16F7488338C0D4" modified="2025-10-08" version="1">MVQMRSRHCARNMHPLCAWFAGLKLDFEDNRFSVYCHSHSNLEFAQIEFLKNERRALRRNELVFMGQHRNSNHSLKTAGIENLKDVDVVEFDKKKVETAEQFKVQKAVVAKKAKFCEELAKISLSLKAKNFEKILPRRSERISKALLGPLLEKVVVEKGIWDVCDEYSDERCAVCFERFGKREEKRICLVCGIICHEGCYVFKEKRKTRNSAKNFICRPFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ24</accession>
    <name>A0ABV2AQ24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CCA tRNA nucleotidyltransferase, mitochondrial</fullName>
            <ecNumber evidence="2">2.7.7.72</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CCA1</name>
        <name evidence="2" type="ORF">MHBO_003308</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.72" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001753">
        <property type="protein sequence ID" value="MES1921778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004810">
        <property type="term" value="F:CCA tRNA nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13734:SF5">
        <property type="entry name" value="CCA TRNA NUCLEOTIDYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13734">
        <property type="entry name" value="TRNA-NUCLEOTIDYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81891">
        <property type="entry name" value="Poly A polymerase C-terminal region-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="27790" checksum="BF0AE5CB9F8BCA3A" modified="2025-10-08" version="1">MEIFDVIFKIPRNVIFPDFKFEKNFFSIESQKIKEKSKTALNFVENNLLNFGSFKKNRPIWILSAILLPLAPFKVLYKKKEISLIRFIVENSLKLSSKMAEKTTNFCELALSLFLLNPLKNKDILNFGNFLAKCGDDWKEMIKFGQILFENNKNDEKDIFDLIVKLKIDNCHLWKQSPYFGGRELKNEFKIEPGPIYKKILDEQFNWRLLNPQSKKEDCRIWIQKKFVVKHKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ46</accession>
    <name>A0ABV2AQ46_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA-dependent RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003322</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RdRP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.48" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001765">
        <property type="protein sequence ID" value="MES1921790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007855">
        <property type="entry name" value="RDRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057596">
        <property type="entry name" value="RDRP_core"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079">
        <property type="entry name" value="RNA-DEPENDENT RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079:SF55">
        <property type="entry name" value="RNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05183">
        <property type="entry name" value="RdRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RDRP core" evidence="2">
        <location>
            <begin position="3"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="30651" checksum="62370CC6187BCFE6" modified="2025-10-08" version="1" fragment="single">EAERLRIFVPKGRLVYGVCDPFGLLKYGECFFNPTLEEGYSKIFNAEVLVFRNPCYHLGDIRKLRCVEADDRYKIYRDVIIFPTTGPRPHCDEMSSGDLDGDMYSVLWDERFVNSANIVEPFYISIQDDGTSTKNRRTTSSINELYERQKWFAFHSSNNSLGLINNTFLKYANKYGPEHPECTKIGALFNMSLDFGVFDEAHLKEVSRRINSLEWEKEEGEERVWQKLLKRGKNLRRNLMIDIGIVILVRIEDGLAIVQVLQIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR7</accession>
    <name>A0ABV2AQR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003531</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002078">
        <property type="protein sequence ID" value="MES1922010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036185">
        <property type="entry name" value="DNA_heli_DnaB-like_N_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48024">
        <property type="entry name" value="N-terminal domain of DnaB helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="20505" checksum="877F149BCD9A072F" modified="2025-10-08" version="1" fragment="single">MTSTLEQRRKVESSVIGAMIKNYSMMQSGCESLSEDHISDRDLRNIFVAIKNCIYNTKEKFINASRVIQVLGNSRISPAFVESISESASILGFRGDIDTIIQYHKNEQLNDILDSGKKLLGATNNTSETTGYIINALVEADSCSKGVSMVSMKDMLYSNDSDILNKIKETKKDPGIYTRKTISTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS9</accession>
    <name>A0ABV2AQS9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003304</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001749">
        <property type="protein sequence ID" value="MES1921773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045610883" evidence="2">
        <location>
            <begin position="17"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17778" checksum="725C3091A2596D5F" modified="2025-10-08" version="1">MTLILKLLFLFQILSAKCLFPLKRKDIEINQENLNLNDKIITIRQNCPENAIFANLATMEQFNSITMVCLPFFDEFVWLQDNLTKIDQFECFKNYPEFESISFASILFLFFCSVLAFYAILAVVSINCKRKVKITSKDSLYFDNPNYEYEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX8</accession>
    <name>A0ABV2AQX8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Beta transducin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">DIP2_3</name>
        <name evidence="4" type="ORF">MHBO_003596</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002188">
        <property type="protein sequence ID" value="MES1922078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051570">
        <property type="entry name" value="TBC1_cilium_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19853">
        <property type="entry name" value="WD REPEAT CONTAINING PROTEIN 3 WDR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19853:SF0">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="117"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="159"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="199"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="308" mass="34676" checksum="6593CE1A5F1C7F0E" modified="2025-10-08" version="1">MFDNYYKISQASNFGVIASAPTAAGLSVVAAKKVTTAIVPTLHSISLWDLKTSKKTNSFTFLDPSLNGPVTCLFDETAGNGPRTIFVGFQTGQICTAAIKPDPKNRTQITLSLEHTFEAHRKAVTAFDCMQSRSILISGSKDTDLLVWDLTEGRLLRRLRAHTNEITNIKNNENLVFSSSKDGLIKIWDIDTFICLKTISGHNGEIWSMAFDKTSNCLITGSVDDKLRSWSFGTKRKNGENLKIEYNGFIETLAKKRICSMLNFGSLLFVVSTNRKIEVFYRRSRKEIDKKVNKRLKRTRSEVRKIFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR98</accession>
    <name>A0ABV2AR98_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002032">
        <property type="protein sequence ID" value="MES1921986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6601" checksum="0798B005931A770C" modified="2025-10-08" version="1">MKYLESAKETIDAMEDSDNKSKLLDLYDQIEESMKNRDFINPIANSVKFLLLSLALF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI1</accession>
    <name>A0ABV2ARI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Polyadenylate-binding protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PABPC4_2</name>
        <name evidence="6" type="ORF">MHBO_003795</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002523">
        <property type="protein sequence ID" value="MES1922285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="95"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="186"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="261"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="266"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="298" mass="33378" checksum="3837465851A6649F" modified="2025-10-08" version="1">MSDSETKSKKIEPSEERSIYIRFGEDTKDDLLALVADYKEDAVIQGANFCILTYEDENKKNSEKAVIEQKLQGKSCTVADYKKSIRQIRAEESKRKVYVAEFGDEVTEENLRKAFEKYGTIDEVILLRSPAKDNKPYAFIKFEDVSSAEKAAEEGVELEGEKAVVEQSRPKRFTPRFRSTGAPLRNAVMIANYDASVPKESIRKQAEGNGEVVSFRFSKDHAIVAYKNPKMAEKAIANINGAKVNDKTLMAVAAPKSMLFGSSRFRGGRGRRGRGRRRNRRGGGENEKENAVNGNEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ5</accession>
    <name>A0ABV2ARJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003594</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002185">
        <property type="protein sequence ID" value="MES1922076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12793" checksum="DA1308C0CBDEE595" modified="2025-10-08" version="1">MSSPDSKDLSNLLRLDPMWLDEDLWKKYSDFYMKVKQKYAEKTDSIIKEKKLTCAKCDGVLKIDEIYFCPSHLRNHYEDIMCLGCKNEQLKRSQKKVLAKEMECVECD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL5</accession>
    <name>A0ABV2ARL5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Transmembrane protein 120 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003817</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TMEM120 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002564">
        <property type="protein sequence ID" value="MES1922310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012926">
        <property type="entry name" value="TMEM120A/B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21433:SF0">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 120 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21433">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07851">
        <property type="entry name" value="TMEM120A-B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="178"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="204"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="231"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="320"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="32"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="350" mass="40133" checksum="06820B03C862B16B" modified="2025-10-08" version="1" fragment="single">MSGSQKNNKTVSKIDADNETLILLKNQLESSKLKAKDKHDRAREVLIQIEKEFENLKSLRLEVAKDAKEMRRLSREVDKFNRKGICPKKQKTVLNKELAAVQAVAKKTNDYVVPSYDSFFLNSLLGKINLRVLNMEDKLNMKNQYHSFKSKTAIVSIILPLLHLVFNFGWAYKLAHQLWIVYLYTSLALREHILCLNGSKIQSWWIYHHYISAVVAFVTITIPPHLQEEGIYYQISKLIVLQGLVMFMQYLYQSKRQYARVATGKAKPFDVALSETLVEAPNRRRILLVLVPMLISCYGCEIYMGASITLFGVLRAGWNIQVLLVGVLLVSMGVGNGFTLFSVLYKKRIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP5</accession>
    <name>A0ABV2ARP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003592</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002180">
        <property type="protein sequence ID" value="MES1922073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051177">
        <property type="entry name" value="CIK-Related_Protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984:SF3">
        <property type="entry name" value="N-TERMINAL KINASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984">
        <property type="entry name" value="SCY1-RELATED S/T PROTEIN KINASE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="229"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="332" mass="38435" checksum="8656AC0842DC01CE" modified="2025-10-08" version="1" fragment="single">TISKLFKSKVRKTRLNLLKHFSDIANNIDPDIFNSDIFNFYTQGFLDSLPMIRDVTAKNAIFVAPILTNNNFNKLLFNLGKLQHDIEPPLRYTSIIALGKIAKFLPKSSRAEKLLLVTRKALSDKSQPSKIGGLLCIYNNTVLFGIGFIASKLLQLIGPLTICKDKEVKDLAVKCLDKIVKILKNYKDGDFEETEEKKLQNNYIEKISSYVANFFEKKKILQNNNKNHFISNNRKSENNNKNIEFSISKKSENDKKESKNFDFEDKTIFNDNIKKSEKSTKNKNYKDISQIDNLNDEIDNWFNRDEIKNLNDLNDDKTEKMEKEENLIDLND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU1</accession>
    <name>A0ABV2ARU1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003887</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002692">
        <property type="protein sequence ID" value="MES1922380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="124" mass="14421" checksum="F9B3B0F69C0DABD3" modified="2025-10-08" version="1" fragment="single">FEKYGVLIVKLARDFSSSPNSGSDYIFNSIGYTCVFILSLYIIINLGLSGRFKIGSNLWNLINIFGFGFFFSIGTFYIFVSKANFFISFGCQFYLIIVFMKLFSLQFYIYKSRKKAKRKNLTFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS17</accession>
    <name>A0ABV2AS17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003973</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002871">
        <property type="protein sequence ID" value="MES1922459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045099720" evidence="1">
        <location>
            <begin position="19"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6336" checksum="D9EE4CB1A0AA7047" modified="2025-10-08" version="1">MFFAVRIVVWPGRFYVTALVLVTGDECSFPGFKKNRFESVAVRRNAAWSGESGYTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS49</accession>
    <name>A0ABV2AS49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003881</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002686">
        <property type="protein sequence ID" value="MES1922374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010402">
        <property type="entry name" value="CCT_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06203">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51017">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCT" evidence="3">
        <location>
            <begin position="47"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="12395" checksum="011E5B8DE6EE42BB" modified="2025-10-08" version="1" fragment="single">PLETFSLVFPTRELLRPGNKRLLESFQKRIANFCIGKYPLVYDVEDRRVVVLKYRDKRWTWNQEWDKETKYPRRKYFAESRPRVNGKFAKIRKDEFYEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH4</accession>
    <name>A0ABV2ASH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004125</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003206">
        <property type="protein sequence ID" value="MES1922607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004567">
        <property type="entry name" value="Type_II_PanK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12280:SF20">
        <property type="entry name" value="4'-PHOSPHOPANTETHEINE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12280">
        <property type="entry name" value="PANTOTHENATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03630">
        <property type="entry name" value="Fumble"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12957" checksum="4D2F41433A922CC6" modified="2025-10-08" version="1" fragment="single">SYKYSSELKSRYGITTTKKDELTCLFRGLNFTLEQRKMECFYIENPNDTTNRRTNLYDMKNVYPYILVNIGSGVSIIRVISRDSFERVSGSFVGGGTFYGLCRLLTKITDFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP6</accession>
    <name>A0ABV2ASP6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Shugoshin C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003929</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002760">
        <property type="protein sequence ID" value="MES1922418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="106"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="202"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="219"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="270" mass="30826" checksum="BD24458E28FFB946" modified="2025-10-08" version="1" fragment="single">MQKHHNKTIHGQSKDSGSGSATKKPQNKRRFVFLKKKKNLVLKNVARRPLASIDNKRSFVDRKRSEIERLSVLNETKEKVEEAKKMFENKENKMTTKETEQRAIEETLEDKENNVSVEDKSYSPNTMKRRALQPLTPKKSPKNKSETLESELKKIGENRRKAFPQSAKKQKTTKPFSAEVRIGEDLRLKSLQSEDPKEVKSDPLLSSDKLSLASDSDQTSENLSSAKSSGHKNSRPLSYGDIVRRGKRFYSKNFELHSENLPSSTSSMFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS8</accession>
    <name>A0ABV2ASS8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004258</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003543">
        <property type="protein sequence ID" value="MES1922735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8001" checksum="AC74F0558F3AA7D3" modified="2025-10-08" version="1">MLPEVCAATLLPPTIAQKRTTEPFPDTLMPTKACPKVLGWDKIQPSTSLLTQKISSAVWRRMSVRRRRFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ8</accession>
    <name>A0ABV2ASZ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">SNAP receptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">SEC22</name>
        <name evidence="8" type="ORF">MHBO_004290</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the synaptobrevin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003629">
        <property type="protein sequence ID" value="MES1922767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14824">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.50">
        <property type="entry name" value="Longin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010908">
        <property type="entry name" value="Longin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044565">
        <property type="entry name" value="Sec22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45837">
        <property type="entry name" value="VESICLE-TRAFFICKING PROTEIN SEC22B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13774">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01270">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50859">
        <property type="entry name" value="LONGIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-0675">Receptor</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Longin" evidence="7">
        <location>
            <begin position="6"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13039" checksum="38FE21AFC18861AD" modified="2025-10-08" version="1">MALFTLLARSTDGIPLVTTSDSANSDFLKKALYVVKSLDKNSPSKCSIKIDNNSFFHYLIEDHVCYMVETDSKYPKQLAFDYLEEVRKHFVLDQKDEVYRYGHAYAAIKFGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT42</accession>
    <name>A0ABV2AT42_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004168</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003325">
        <property type="protein sequence ID" value="MES1922649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24345">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE PLK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="62"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="235" mass="27566" checksum="E7A827EA439852DE" modified="2025-10-08" version="1">MGNKFPNTSRITTNLVEENEPIPKMLPTWEKVLDSEKEELEASKCLFEAKGHDSCCKTIMDFKISRIISQTERINVFEVEDTATEVRFAVKIYEREKRKAYQKNEIRLLTILHDIEGDFVRCEHRFTTKNHNIIVLELFVSDFYDYMKHRNKMLSLEMARVLAMKLVRIIRILHENGIIYADIKRGNIAIDKNGNLKLIDFDQSCRAGEKLDFVPLGSINYMGFVNYLKHCSFYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT73</accession>
    <name>A0ABV2AT73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_004201</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003400">
        <property type="protein sequence ID" value="MES1922679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044677">
        <property type="entry name" value="SLC25A3/Pic2/Mir1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45671">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45671:SF10">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 25 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="2"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1922679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="10723" checksum="08A4C480F9D95EFE" modified="2025-10-08" version="1">MEQLRVTFLAGYSAGIICALVSHPADSLVSLMGKSSFKGKGFVAIAKNVGFRKLMFNGLMVRILMIGTLTGFQWWIYDSFKTALGLGTSGGGAAQSKNRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT84</accession>
    <name>A0ABV2AT84_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Tubulin/FtsZ 2-layer sandwich domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004407</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>GTP + H2O = GDP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="7">
            <dbReference type="Rhea" id="RHEA:19670"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the tubulin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003953">
        <property type="protein sequence ID" value="MES1922878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.600">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.20">
        <property type="entry name" value="Tubulin/FtsZ, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002452">
        <property type="entry name" value="Alpha_tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008280">
        <property type="entry name" value="Tub_FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000217">
        <property type="entry name" value="Tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037103">
        <property type="entry name" value="Tubulin/FtsZ-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018316">
        <property type="entry name" value="Tubulin/FtsZ_2-layer-sand-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023123">
        <property type="entry name" value="Tubulin_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11588">
        <property type="entry name" value="TUBULIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03953">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01162">
        <property type="entry name" value="ALPHATUBULIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55307">
        <property type="entry name" value="Tubulin C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0493">Microtubule</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tubulin/FtsZ 2-layer sandwich" evidence="8">
        <location>
            <begin position="2"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00049117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="12991" checksum="5D5CC7F8E87D498D" modified="2025-10-08" version="1" fragment="single">SIKSKRTFQSVDWCPTGFKVGINKQPPTNIEEGDLAKVKRAVCLVGNNTAIGDVFKHLNNKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYDEVGLDGESEASGDNGNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB6</accession>
    <name>A0ABV2ATB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RNA polymerase III-inhibiting protein maf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">MAF1</name>
        <name evidence="1" type="ORF">MHBO_004448</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004037">
        <property type="protein sequence ID" value="MES1922918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1000.50">
        <property type="entry name" value="Repressor of RNA polymerase III transcription Maf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015257">
        <property type="entry name" value="Maf1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038564">
        <property type="entry name" value="Maf1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22504">
        <property type="entry name" value="REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22504:SF0">
        <property type="entry name" value="REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09174">
        <property type="entry name" value="Maf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="18507" checksum="CC251E4D51349984" modified="2025-10-08" version="1">MDIDNNISLKKFSFFIEVLNLSYEDFDFKYFYCHTPINDFYCYISFCKRFISPRHFKCLVSHGGDRKKDLLEIRNMVNSKLESVESVENGFLDKLWRDIDHFVPLQNCEIYSYNPPREEDNLIVENKLWDLNLFFFQKRHILFLSCVATVYRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD3</accession>
    <name>A0ABV2ATD3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004464</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004080">
        <property type="protein sequence ID" value="MES1922933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16251" checksum="A5BA10F40D0467B7" modified="2025-10-08" version="1">MSVTKSFHLFKILNHDKLIRCLETTKNGDIVTCGSEGQITLWKFAKSPQSTNYEKITPFQESIHGKNLVFGIYRIKNNIFSEKECFATTSFDKTAKIWDLSGKVHLCLNGHAKSVNCFVEMEENFFVTGSFDQFFGNHLNQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ3</accession>
    <name>A0ABV2ATJ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004516</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004247">
        <property type="protein sequence ID" value="MES1922984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="13076" checksum="B45897E6A10211E6" modified="2025-10-08" version="1" fragment="single">FQVFRSTKQIQIFLNGLSVWVSNSSYKNKKKSLTEISTQQKLIFNIYSTSYEFFRSDHKAIYSIINLNVTWNYKSVSKDDFENKLQQKYSENYEQLIMPFLLLKESTYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ7</accession>
    <name>A0ABV2ATJ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Translation initiation factor 5A-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004512</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004234">
        <property type="protein sequence ID" value="MES1922980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048670">
        <property type="entry name" value="IF5A-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21485">
        <property type="entry name" value="IF5A-like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Translation initiation factor 5A-like N-terminal" evidence="1">
        <location>
            <begin position="22"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="18387" checksum="F81CF5B8DCD22B9D" modified="2025-10-08" version="1">MSLLPNARTLPAKSGEDIESRLEPKTAHEVKNGEWIIDPKSGFPGIVSNIKASKTGKHGHIKVTFQCDMPFSGKTSSLMHAGGDRLLSPRMERKEFSVSDYNDGEITVLDDNGDERYITCSEESEVGIKLMGIIEDGEVGSLTVLIGPQKKGSKTAELVEMPEAVKVQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ1</accession>
    <name>A0ABV2ATQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004576</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004447">
        <property type="protein sequence ID" value="MES1923041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="6833" checksum="13A38262317C8654" modified="2025-10-08" version="1">MIGSEITGKFTGKLTEANYKQFTDGYIKTIKDGLGLDIHSNNVVFETSGTESLDHLLNPKED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS7</accession>
    <name>A0ABV2ATS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004548">
        <property type="protein sequence ID" value="MES1923073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="102"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="237" mass="27601" checksum="536128A3718E9D14" modified="2025-10-08" version="1">MLNESKKGIYSPNYIVPNFESFSKQNGVRKEIFSKSQNLQNSKNKRHLYNDNVLLNGNSEIKSNIKIAKKLEILDQIESKTPVNLQLHTDFEQMNEDEKFRLHEELKVNQEIENELNNDDEEIREEQKRIVNAHGKIPVSNIEYFDKVHMLGELIKTMQQVLMENGKKGEWPNFGEMEGDPQSQNRARKPRFVAKVCRPEEIVLLPKVGEFGPGIETMELADDIKVWAKFLLLLKFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY5</accession>
    <name>A0ABV2ATY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004676</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004817">
        <property type="protein sequence ID" value="MES1923133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10703" checksum="C567B96EF15EF297" modified="2025-10-08" version="1">MTNPPTKKIDLEDKLIQILQCTTIIFEPSRSRYEPFCSHTVPSKPFGVPFPVQNLPFSSKSVRSLIPFFFYMIIRNSSVNHQWITTSHTKEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF3</accession>
    <name>A0ABV2AUF3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004639</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004665">
        <property type="protein sequence ID" value="MES1923099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="8330" checksum="4F6B3E7D0B853154" modified="2025-10-08" version="1">MIMIGKLPNSGGGVGGNIAPNKNKKRSFISLRAEDRLSIDMRLCISKICPATPPLRIKCSSSKITENQLMSKSQIAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ1</accession>
    <name>A0ABV2AUJ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Palmitoyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.225</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004909</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="7">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010005744">
        <property type="protein sequence ID" value="MES1923345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039859">
        <property type="entry name" value="PFA4/ZDH16/20/ERF2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883:SF203">
        <property type="entry name" value="PALMITOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883">
        <property type="entry name" value="ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="114"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="8">
        <location>
            <begin position="24"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15731" checksum="03248DB6FDC35757" modified="2025-10-08" version="1" fragment="single">KKTENKEIDNIAKNSLSSDFKSSIHSICNICNLEMIKRTKHCYECHKCVHKFDHHCKYLNTCVGGKNYKFFIIVIGCIFAISLFHIALIIFLFVNINNQNLVDRIDKSIFNKTAYFILLGLSVFPAFITLFGFGILS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM0</accession>
    <name>A0ABV2AUM0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Band 7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004939</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005881">
        <property type="protein sequence ID" value="MES1923375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="190" mass="20254" checksum="C815F0AC5B14B183" modified="2025-10-08" version="1">MGFDGKTLDQIDTRRDSENAVIISKANADKAAQEAKEQAQIALKNKAIAAGKANVIKERDVIDAQRKSELAVINAKLEVTKASELAKQRENELAAANLEAQTIEVLSIAKAEAADREIKAGGQLSAEQQTRIDINRAWANAHAKKAVSQYVVGDAQATGVSINATQEAMQALSLKAARDLMAKPVVPAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV80</accession>
    <name>A0ABV2AV80_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006925">
        <property type="protein sequence ID" value="MES1923566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="89" mass="9850" checksum="0A4EAE42C051E4AD" modified="2025-10-08" version="1">MLTSKTPLDFICSPLDTDFRKELFGRINSIACFSGNNVKENDFNAFSTKSSTFKKATPTTVGGKPKSLLRTVNLRKCGGFRVVKGKEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWM8</accession>
    <name>A0ABV2AWM8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein transport protein SEC23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SEC23A_2</name>
        <name evidence="3" type="ORF">MHBO_005245</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasmic vesicle</location>
            <location evidence="1">COPII-coated vesicle membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the SEC23/SEC24 family. SEC23 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007304">
        <property type="protein sequence ID" value="MES1923632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037364">
        <property type="entry name" value="Sec23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006896">
        <property type="entry name" value="Sec23/24_trunk_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141:SF0">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04811">
        <property type="entry name" value="Sec23_trunk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="1" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="1" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Sec23/Sec24 trunk" evidence="2">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11062" checksum="369A60C4F96A26AE" modified="2025-10-08" version="1" fragment="single">KFYNDLSIRCTKSNLVIDVFACSLDQVGLAEMKSLVESTGGHIVLCESFSEETFQESFRKVFHRVPGESVEMIFGAELEVNVSRFNCPNLTKSKMTFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE44</accession>
    <name>A0ABV2AE44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">histone acetyltransferase</fullName>
            <ecNumber evidence="3">2.3.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">HAG1</name>
        <name evidence="15" type="ORF">MHBO_000041</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the acetyltransferase family. GCN5 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.48" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061733">
        <property type="term" value="F:protein-lysine-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018359">
        <property type="entry name" value="Bromodomain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037800">
        <property type="entry name" value="GCN5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45750">
        <property type="entry name" value="GH11602P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45750:SF3">
        <property type="entry name" value="HISTONE ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00503">
        <property type="entry name" value="BROMODOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00633">
        <property type="entry name" value="BROMODOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0010">Activator</keyword>
    <keyword evidence="11 15" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7 12" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="5" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="14">
        <location>
            <begin position="15"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="Bromo" evidence="13">
        <location>
            <begin position="251"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1918006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="339" mass="39035" checksum="C7CA9C531229C24E" modified="2025-10-08" version="1">MAQTASGIEFDVIWNDEREEALVKLIELKDIFSVQLPKMPKEYIVRLVFDKNHRSLIISKTGPKPKVIGGVCFRPFYEQNFSEIVFCAISSAEQVKGYGMKMMNQLKEYTKIEGIFNFLTFADNYAIGYFKKQGFTRVSSLANSQWAGFIKEYDGGTLMECHLHPRVDYLHFREILSLQKQYALGELRKISNSHVVHRGIKQLEDGPVDYGQIAGLKEAGWSCSQKRRKQSRELEDSHLLAKIGAIVKAVKNTKESWPFLAAVDAKQVPDYYSIIKNPMDLAIITTKLNDRRYRSKDEFATDFRLIIDNCKTYNAKESNYYRCADTIEKLFGRLIESVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE59</accession>
    <name>A0ABV2AE59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000047</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12882" checksum="E60C70D671F9D379" modified="2025-10-08" version="1">MRMVCARTHRDSTDKWMWDKKVANKIECRRGCRRAGLIRPVHQSGYGAKSACKHVGIPQHGDSDLVSSCEFSCDTDNGFKEIDEKFMLLHCDKNGEFADFPLNFHCEQGFLAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AED5</accession>
    <name>A0ABV2AED5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">THAP-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000100</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000012">
        <property type="protein sequence ID" value="MES1918078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="185" mass="21429" checksum="5D3442D4AE3BF7F2" modified="2025-10-08" version="1">MEYLKILASGGGNFVKEERKINCKAVTFIKNNFDESTLLKWSELISDPLLLNCKDTKYERKILDIENKFENVFLRTNDIPRMPPLEMVIRLGMATIFTKRCKPAKNATCLVCSIMGSFSRAPKRNFKFKNSVLFCSITREELTESNYAMQLPTNKVCGENWIRKQNRATQNSLNLQNCKRLFIVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEJ7</accession>
    <name>A0ABV2AEJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000132</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="7889" checksum="6E1EB32584181135" modified="2025-10-08" version="1">MRFQGFVVKGFQRGRKMGILTGSVYHSISKHRSQLVGQSSAGLVREWRLRRMGKGGKRHCTQSDDLDRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI4</accession>
    <name>A0ABV2AFI4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000418</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000064">
        <property type="protein sequence ID" value="MES1918450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="184"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="247" mass="28617" checksum="D8A3DF361B11C864" modified="2025-10-08" version="1">MLSLKKHLYTLTRGHFAKARRTITTEELLHDRLYKRPTKRLQFGRFPVYDTEADPSIDKIDQSRYSPRGLFEPLKPSWGKQPRKPTEVGKPADISHMMPHVRSGAFADRSLVPEELVLRGGDPVHLLYNSKFVSPNAPYLDMKTTYTFKKDGDAKINSSETHRRPEDALNFADRAVQRFLDDRFVDLGSSMGTIVLVGFYFYVIYKLFKGVLKSKIHFGGSETDFDYLPIDEYFNHLEDKSRDYIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU4</accession>
    <name>A0ABV2AFU4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Coatomer subunit epsilon</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000246</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasmic vesicle</location>
            <location evidence="2">COPI-coated vesicle membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the COPE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000032">
        <property type="protein sequence ID" value="MES1918248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006822">
        <property type="entry name" value="Coatomer_esu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10805">
        <property type="entry name" value="COATOMER SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10805:SF0">
        <property type="entry name" value="COATOMER SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04733">
        <property type="entry name" value="Coatomer_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="267" mass="30563" checksum="D6EB4CFAFA4CC30C" modified="2025-10-08" version="1">MANNDGLFLLRSAFYTWNSQLVEKEFSGLERDNEDSDLAKVFYYLGTGRNEVFKESEQLRKLAKAYETRKNIKCDRVDYKNVPVCLLMAYSCFNSEDYDSVVKFAEEMENLDFYILAAQMYIKFGKTNFAEIVLEKMKAINPEDVSTVIVAAWISIVTADTQMLKESCQNMQDIIESVDNSSYILHLEAICNALLDSGSETSEYIDEAYELLGESCNRKMIEGVLTYNHHALAVSSGQKNRENLKSSQCFEEEKKMLVAKFEKLAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV1</accession>
    <name>A0ABV2AFV1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">M7GpppX diphosphatase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000318</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="entry name" value="HIT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008594">
        <property type="entry name" value="DcpS/DCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12978">
        <property type="entry name" value="HISTIDINE TRIAD HIT PROTEIN MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12978:SF0">
        <property type="entry name" value="M7GPPPX DIPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11969">
        <property type="entry name" value="DcpS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="HIT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="248" mass="29172" checksum="17C1270E1CEAA0C7" modified="2025-10-08" version="1">MEIDKTINDNNQYKTFRVKIEPSLVNFEALIVSPATEVDILKMSEQKYLRKVETPLMYKECTLKYIDSIPNSQIDWIKAIFSKEKETEKVLFRNDQFVVVTDEFDNKNKDDLHVLALTCDPSLRSIRDLRGEKHLSLLRNIRKAGYKALEENFSLKSECVFAYINYLPSFYRFHVHFRPVSTASLFYYLAEKAMHLHILEDAIFALKTNSSHYRYSNLSLFLGEKRHQSLLESFQKTDCIEDGHKCDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG10</accession>
    <name>A0ABV2AG10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000042">
        <property type="protein sequence ID" value="MES1918323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="28651" checksum="2FB95603DD8B94DF" modified="2025-10-08" version="1">MRIIRSYKYIENNIRKVKATMNRYYSVAKHFGDDDYDQIFDSMERLERIKKGQKQSKSYDFSPISQKLSSYIRRLRNEEKKEKILESCSLDRRDEICSTNSTCCPDQIYSAPNINPTDANVCKNEAIFGRKGRNEEKLTEDNVMLQTIIKELKTLVEKMEHLVKEGNRGNLNHFRKSRKVGIVEQIDQKFRSCCEEKRFLERTQQKKTGQNEPKDAPILQTEAELLQRRIGKTIGRSTEVTKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG14</accession>
    <name>A0ABV2AG14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005311</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000091">
        <property type="protein sequence ID" value="MES1918597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046789259" evidence="2">
        <location>
            <begin position="19"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="20169" checksum="5859BB298EE32F1F" modified="2025-10-08" version="1">MMRFCYLLSLFAVLASMAVNSCKFCPFLDNCFREFPSKTKLHVFGHYVDFNNLNDFFVFLTFSFIFCGILLLNKPRKFKIDMALAIIICYCFYLGNHLMVFLLKFLFGDSNCNTKPNSVSGHFNFYVYFLLSLRHIFTAFKVFSVQNRNLKLKKNFSFWKLVMSSSHCCHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG77</accession>
    <name>A0ABV2AG77_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000617</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000106">
        <property type="protein sequence ID" value="MES1918690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051183">
        <property type="entry name" value="U1_U11-U12_snRNP_70-35kDa"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13952">
        <property type="entry name" value="U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13952:SF6">
        <property type="entry name" value="U11_U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="64"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="20019" checksum="5221E41DAF715D36" modified="2025-10-08" version="1">MPREKELHVLKSRDRRSFAVRYEPKKAGYINGKSIGFHDKALRRAEKANYNADKDPMIKGNPFKTLFVSRLEKTLTENQIKAVFERFGDIKRIRLVKNKNNVSRGYAFLEFRRSKSFMRAYTTSNKMVIKGKRILVDFERERIMKGWKPRRLGFIVIKNWLHYYRII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB2</accession>
    <name>A0ABV2AGB2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DRAP deaminase</fullName>
            <ecNumber evidence="2">5.4.99.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RIB2</name>
        <name evidence="2" type="ORF">MHBO_000395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.28" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000061">
        <property type="protein sequence ID" value="MES1918428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0160151">
        <property type="term" value="F:tRNA pseudouridine(32) synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2350.10">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050188">
        <property type="entry name" value="RluA_PseudoU_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21600">
        <property type="entry name" value="MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21600:SF40">
        <property type="entry name" value="PSEUDOURIDYLATE SYNTHASE RPUSD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pseudouridine synthase RsuA/RluA-like" evidence="1">
        <location>
            <begin position="2"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18927" checksum="0F0C4CD1E6FD3428" modified="2025-10-08" version="1">MICQKFRQKMENFDLEKIYLARVTGHFSPENDEFVIENSRIVSSFKNKKPFYLTVDFSEKTGKASETRVKRICYDKATNSTLIKCVLVTGRTHQIRVHLRRLGHPIFDDYLYNENFEQAKTRKIDEHSVKLFSDLTKKYFWKDCRYCKEALENPKYTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF1</accession>
    <name>A0ABV2AGF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000304</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000042">
        <property type="protein sequence ID" value="MES1918322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000953">
        <property type="entry name" value="Chromo/chromo_shadow_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023780">
        <property type="entry name" value="Chromo_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623">
        <property type="entry name" value="CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623:SF48">
        <property type="entry name" value="SNF2 FAMILY DNA-DEPENDENT ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00385">
        <property type="entry name" value="Chromo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50013">
        <property type="entry name" value="CHROMO_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Chromo" evidence="8">
        <location>
            <begin position="504"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="9">
        <location>
            <begin position="601"/>
            <end position="772"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="10">
        <location>
            <begin position="900"/>
            <end position="1063"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="171"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="299"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1143"/>
            <end position="1186"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="176"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1167"/>
            <end position="1186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1326" mass="153385" checksum="8CB4E73283A0DFD6" modified="2025-10-08" version="1">MDNIEKLESKRLRSAFENIIDEICGDLEKTDFEVKKTCLQLFRQKILLFREKNFLENFSNQLEREKEGVTTLKTSLVAGDPHNRQMEKLKMSVAKHRKNIEVHKSNLGKFFRKIQTHSVQEIKWQETYPNEWACLTRAAALRLFADSQKDKFGDIFESGIKTLSLALQSTKQNSVESERSGSKGFQRSENRAFGRKSTRSNTNLAQLCAEDDLEKGGEMWSEDESRALIAFVKANGFRWKECAQSKTIRERHSDSQDCKEQYIRLYARAKMMAMRAILTRDRMAQSRRSYREGDFIVERNSLGPPKKRKRLRKENRLPRNDVYSSSSGESFEPRDDQVFRNRKSDRLEAVEKINYFEENFEDPADKQASARFQIDRLLATRKTKLTDKLKKVHEKVDETGNVERFAARIYEFEDLLFKTDQNELENDFSGEESGEENIVEQFLVKLNGISYRNCVWLTKQQLISFFGPRSAETRISNFQRKKDFVLSENKRLWGKSHHFNPQFLSVDRLISREVRQNREFYLVVWGGGLSVEQATWEPAEHIEETYKKRFRDYHLVRSENKEARAPFRGGRLFLPMDGDTRCADNSRKLHDYQVEGVNWLLGNFYQNRNCILADEMGLGKTVQTVVFLSFLLENSLCSAPFFVVVPLSTIGHWRREAENWSNLRTLVYYDSGGGRRARDRIRELEFFSADGSAKFDLLVTSYEIAVQDAMEISAALPQLLVVDEGHRLKNKGAKLKKALNSLGATKRLLLTGTPIQNNMAELWSLMNFLSPLEFLAEDAPSESPTPALLRALQQKVNPRILRRFKETVLGKLPLKQETVVDIELTTLQKKYYRAIFEKNKVFLLEAGSGRLPKLVNIEMQLRKCCNHPFLIEGVEEKETAGANRSEYFRRCVEASGKLVFLDKLLPRLKAEGHRVLLFSQMTRVLDVLQEYLRFKGYGFERIDGSVVGSARQQAIDRFDADPERFVFLLTTRAGGVGLNLAAADTVVLFDSDWNPQQDLQAQARCHRIGQVRPVMVYRLVTKNSYESEIFRRASVKLGLDKAFLTKLEPGEDGKIPVSEQKHLDEMLRFGAYRFLRDDGEAAKTFCEKDIDSLLASNAHVLAESETPSELQKMAFASAHADASLDVRADDFWEKVLRAEKAKSEMNTSRFEQKEEMTRKKRKRDRKTGKDLKSEKNRKTGKNLKSEKSRKSVFAECEDCARKLEGSQKLGVCVRCLGRCSRCGDRVEGEAYQRVECVERRCRRRLHPICAEKLRLEHTTFYGSQSRKRFRCQRHFCAKCSVLSKFSLVCNKSKLERCSGCFVSYHSRCRPRSFLSKKQICKDCRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG2</accession>
    <name>A0ABV2AGG2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000317</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047623">
        <property type="entry name" value="SatP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30178">
        <property type="entry name" value="INNER MEMBRANE PROTEIN YAAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30178:SF3">
        <property type="entry name" value="SUCCINATE-ACETATE_PROTON SYMPORTER SATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18975" checksum="A633A443C0D6B059" modified="2025-10-08" version="1" fragment="single">MLIKKQHILWQIWSVKRFSTDKLKKKLEYRLRLVFSKIIKNSKMDNNRKIADCSPIAFYSFSFCSILKGLLLLNVFSSEISISYATDYFLVLGLTQSICGIIQIFDNKVFPGTLFIGFGVHWIFQFVISSTKGVHYEIADSTLWMFFTFVMFVNSFETNWIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH04</accession>
    <name>A0ABV2AH04_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000684</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000122">
        <property type="protein sequence ID" value="MES1918774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="576"/>
            <end position="628"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="633" mass="74515" checksum="2C9A1C235DCD52FE" modified="2025-10-08" version="1">MIDKPIFASNISINSLLVYVIPNKDLSQNSQFQTKVDESLRTLSNISSEKTENFDFDFKIFIDEVHFGVLNVNNHSVLPISKEEKFGKFKEKKTSLSAKDIFVFIAENELETKNSDLVKIKCIFSTLQNNQQSLENQENCGNSDISLEKPLFFWNKENANFLNLKIFKRTPLLQPSTKSVKDNVFGDLKIKKMSICFDILDVVERFKMLSGNKFNYRKMKNFIVYFKNGDLEEKFSSKENEFVFRFLLEDLEFVVYNKMKKFAEIQLNNLKFSNQKNLLISSRNRKLITPFLNLDKFGQISRELNFDQIKLSFKQNCLKLSKTVFGHYSDEENLVLAFFNENFDVKMAECFSADDSVVFMKEKMEKLNFTPEKILETFKESDYVKNGIENLIRFLNEKENWNLGKFTNLLKFGQNAFSEKILKFFKQNFKQISENVNLTKPKILSKNKQFLIFENKNLAVQTKLGKLNGCFRSENNLIFYDRSNDYSRFRCSSNKMNLKTPKSNFEKQFFLLKMNKNGENFENNFDLSFSYQPDSFLHSINLLKEQIQIQSNFVSDKNKPAKFDEKALKTAEEKVFGQEIESVLELERKINELKEQILMKDIVIKNYERQLENAFEELNNNIRNKNNNSFNIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH47</accession>
    <name>A0ABV2AH47_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000868</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000172">
        <property type="protein sequence ID" value="MES1918985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051229">
        <property type="entry name" value="ALYREF_mRNA_export"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19965">
        <property type="entry name" value="RNA AND EXPORT FACTOR BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19965:SF35">
        <property type="entry name" value="RNA ANNEALING PROTEIN YRA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="56"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="25824" checksum="BE91160EF1E5146C" modified="2025-10-08" version="1">MNNLERQKNIPLAEVISNKRNNLSKNRSRRRNFNRNFSTASRRINKNTVPSFQTSSQIFVSDLESHVSSQDLREIFKIAGKIKDSRIHFDKRGKSLGTAEVTFFARADAIRACKKYNKAHVDGRPMKIEMLSGVDALGANTVPAQNGLARSVVRRRGSRYTRGLRWRRGFAGRRNPLLRRANDKFRGMNGKSSFFGAGSFGVPRGLDEEAQKKFAESLDAELDSFKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH78</accession>
    <name>A0ABV2AH78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000908</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000183">
        <property type="protein sequence ID" value="MES1919031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="103"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="103"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="152"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="22054" checksum="7936B14B78BF0112" modified="2025-10-08" version="1">MVNLESQIDQLRDSLANEKARIIESVRATFNKVSKNHFFQLRKDKQTLKRKLQSLKSNKEKSEAAAKRAKMELKYKIEALCHSEKRLFSLVKVCCSSNALEKRTRLGHSEPSERPRPQVPRPEQGKHAENANSPRRKRLAPDGTGQTQKKLRVVEEQTRRTDFRNRVQQENLSRHGLFVRKGNKATENQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH79</accession>
    <name>A0ABV2AH79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Elongator complex protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ELP2</name>
        <name evidence="12" type="ORF">MHBO_000898</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">tRNA modification; 5-methoxycarbonylmethyl-2-thiouridine-tRNA biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the WD repeat ELP2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000180">
        <property type="protein sequence ID" value="MES1919020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037289">
        <property type="entry name" value="Elp2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44111">
        <property type="entry name" value="ELONGATOR COMPLEX PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44111:SF1">
        <property type="entry name" value="ELONGATOR COMPLEX PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="7 11" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="11">
        <location>
            <begin position="194"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="11">
        <location>
            <begin position="266"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="11">
        <location>
            <begin position="372"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="11">
        <location>
            <begin position="622"/>
            <end position="655"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="759" mass="84903" checksum="C4BA0D6784C5B82D" modified="2025-10-08" version="1">MITENLAEFVGFNPVPNCLDCNNDTVVYAAKNNIVVCYINSDVAKKIQIFNVSDSEISTVKIISKQRVSEETVNIVTGNKAGQVKFFSKSSNSNKIDFQRQLAKTGDPVVDVIYIHSPNHSSGDFLIVAHEKSVVVYKNNLLIQEIQNEGVLNFAVTCHSKKTLFLAMAGVDSKIHVFSANVFSEKTFQHRLSFEGHSDWIKSIKFVEKDFSENVFLASAGQDSKVIVWRLSLGLPEKNTLEYFKVSKLSFSVGESNFCFEKKSVLRGHTSNVTSVDWIPSSLGEETESLLTSSMDGTARIWELEDAASKDIETHQNFNWSEAFCCKETRGKGGGFLAAVFSGNKLIAASKSGALHVWARDINNLFKEVPFPTGHNDAIESVAWDRKSGFLYSCGSDKTARVFAYKKATSEKSVCRSSEWREISRPQLHGHKILSIRPLSFPPFSYISAAEETCLRIFTATKKFAELFPNEADGFYDERVDFAGNSELNLCNKPEENRSIAANNAKFCESDLWENSQWQEKQKLFVRRENATATSVFGNEIAVVGERSGLSKQNEIEFWTRNTKEMFLYEKSKRSCAAGILGITSIQHSPDGLHLLVTGRNRNFTIFKRTTENCFDKVCEEKNAHRRSLSCCVWLDEKTFATGSLDRRVKIWELDCESYVPKKKAKISLSFGVESVAFSKNVESILVGLLNGDVVIIKKIGDNFANSEDGGKFSLKEYFGKDLNGAILTIDVIDFTDKKNCLCATGSRDGVLRIFKLSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG1</accession>
    <name>A0ABV2AHG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA excision repair protein ERCC-6-like 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ERCC6L2_1</name>
        <name evidence="3" type="ORF">MHBO_000975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000201">
        <property type="protein sequence ID" value="MES1919111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050496">
        <property type="entry name" value="SNF2_RAD54_helicase_repair"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629:SF7">
        <property type="entry name" value="DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629">
        <property type="entry name" value="SNF2/RAD54 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="31780" checksum="D301AE641DD5243D" modified="2025-10-08" version="1">MLDILSSVLRREGHNFDRIDGKLDSQKRYDKVRKFNTDSTISILLISTKAGGTGLNLASANVVINFDLSWNPSHDLQAQDRCYRIGQKKDVLVYRLISVGTVEEAMYKRQIDKQQLAGSYYSEASQKRYFKQEELIGALNIFEYSPENKCETEKIIERYKSRLKDSQNSENGVVYFHSNAQIVKHEKQKIIETTTDEEKQQPKKQNSKQNWIEKLKQKLENREKLREIEKHKCLKKTKIFLEDKKEFKKRALRLKHKKCNFQPKRIDYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG2</accession>
    <name>A0ABV2AHG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Large ribosomal subunit protein uL6 alpha-beta domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000733</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000135">
        <property type="protein sequence ID" value="MES1918833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.930.12">
        <property type="entry name" value="Ribosomal protein L6, alpha-beta domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000702">
        <property type="entry name" value="Ribosomal_uL6-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036789">
        <property type="entry name" value="Ribosomal_uL6-like_a/b-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020040">
        <property type="entry name" value="Ribosomal_uL6_a/b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019906">
        <property type="entry name" value="Ribosomal_uL6_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002358">
        <property type="entry name" value="Ribosomal_uL6_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11655">
        <property type="entry name" value="60S/50S RIBOSOMAL PROTEIN L6/L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11655:SF14">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL6M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00347">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002162">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00059">
        <property type="entry name" value="RIBOSOMALL6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56053">
        <property type="entry name" value="Ribosomal protein L6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00525">
        <property type="entry name" value="RIBOSOMAL_L6_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL6 alpha-beta" evidence="5">
        <location>
            <begin position="148"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26512" checksum="E9BE77210E36949C" modified="2025-10-08" version="1">MLMATFKINPNNVYLAFARRISTFGRKSMKVGESIIGRRPIKLVPGVSVGIKRDIYRGEHLVVVKGPLGEISQIIKNQVDVRLPPKDSTILLKQDKDSPVYDKALLGTYRTVIQNMIYDTAIGYFKKLELHGIGFRAFFDKDKDGRLNKSELRMRLGTTHDVVYKVPEDILIQIFKEGTRIRIYGCDRRRVCEEAKKIRRLKKPEVYKGKGIRYEGEQIKLKKVQKVDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG7</accession>
    <name>A0ABV2AHG7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myosin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001007</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000209">
        <property type="protein sequence ID" value="MES1919143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2" id="KW-0505">Motor protein</keyword>
    <keyword evidence="1 3" id="KW-0518">Myosin</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myosin motor" evidence="4">
        <location>
            <begin position="1"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21883" checksum="71B87600318BA60C" modified="2025-10-08" version="1">MLVTVNPYKNLPLMGDEMVEMYRKLKFAETGKPHIYNIASRALKGLALNGKNQSIIIRFSLVLIQVAIPAPGRPNPQSTLFCTFQKYPKATEMWKVKFSAVFRYWKRLETQKFFVRPKRRTKIAIRVGSGNGWRFSSRSIGRSASKARRSQNICWKRRELCGRLQAKRTSTFSICCRLFSRSANAKIWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH9</accession>
    <name>A0ABV2AHH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Metalloprotease, variant 2</fullName>
            <ecNumber evidence="10">3.4.24.56</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">STE23</name>
        <name evidence="10" type="ORF">MHBO_000793</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.56" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000151">
        <property type="protein sequence ID" value="MES1918899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050626">
        <property type="entry name" value="Peptidase_M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032632">
        <property type="entry name" value="Peptidase_M16_M"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690:SF18">
        <property type="entry name" value="INSULIN-DEGRADING ENZYME-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690">
        <property type="entry name" value="NARDILYSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16187">
        <property type="entry name" value="Peptidase_M16_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase M16 N-terminal" evidence="7">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M16 C-terminal" evidence="8">
        <location>
            <begin position="117"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M16 middle/third" evidence="9">
        <location>
            <begin position="305"/>
            <end position="586"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="743" mass="87252" checksum="B998EF91BE26F8A7" modified="2025-10-08" version="1">MVHLGSKTYENEQEYKNFLANHGGASNAHTKSEQTVYHFNVDNDYYQKTVDIFSKMLTEPLFKQEVMSREIKAIQNEYLLNYQNDHRRVYNLQKSLINKNNPFSKFSTGNIETLSSLKSDDLLKFHSKHYIGKNISIASVSNMSLEKQRKLIESEFAILSKQQNFDKKLNFSNCQFDDLKNVFVRLKPVKFANKAIIIWPLKSFYKKWDCSERNIISHCLGHEGNGSILNLLKFENLAKSLTVTTSDFEFGSKIEMVINLTPNGQENYKSVFGIVLNYIDLLAKSEKSYFKNLNEELNLIQETKFNSRSKRSASLESINIATNIFRYGIENSIKGPFVKKKFKFKKLIKLLNFILVPENCFFILFDNDLNENNCEIEKWYKIKYKKSQISSSLEKLNLNINNKFSVSLNLPKQNLFLPEKKQNFTKKFENFEMVKFFENSSLKCWHKESNFGTSKCRIDFEINDFVTTKNIENYIKSKIRIKILNNRLKKNLYDALICGYFFKIKIIHSGHKLYCSGYTEKAILVISEFLNVLQSTKIQNFEFQNAIFSLKKKLKNSLIKRSNRFCNDKCDEILNERYWNFKAQLDCVDKLNLTKNDIELFSQNWNCSQKGCQLLITGKSDQNFKKSIIEKLKSLNLILNSEKWFKNQSTFIKPGNNFYEFDHPIEKNNCVRIVFELGDYDSLSESKAMVLSRLLKQPFFNHIRTQNCRSYLVHSGYFYKNSNFQKFRQIVFSSIGNVPFKHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM5</accession>
    <name>A0ABV2AHM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001033</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000215">
        <property type="protein sequence ID" value="MES1919168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="20624" checksum="3E672C94FBC2588B" modified="2025-10-08" version="1">MVCTRKKGDTEDSWRWADGVVTILECKLGLVVLIEGCNKFGLNNPVTQNSFGAESDCDQVGFTASGDSNLVSSCNLVCNNDNGYYSLASTSAFFECKEEKNFELNTYFECDQGCRIEGKNVESRFGNYVVKCNSPLAENWYNICNVRCHEESSVLEMGRFGFSDYVMCRMGRWNFDNIRLKCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU1</accession>
    <name>A0ABV2AHU1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">proton-translocating NAD(P)(+) transhydrogenase</fullName>
            <ecNumber evidence="1">7.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001090</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>NAD(+) + NADPH + H(+)(in) = NADH + NADP(+) + H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000233">
        <property type="protein sequence ID" value="MES1919230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007886">
        <property type="entry name" value="AlaDH/PNT_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160">
        <property type="entry name" value="NAD(P) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160:SF19">
        <property type="entry name" value="PROTON-TRANSLOCATING NAD(P)(+) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05222">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52283">
        <property type="entry name" value="Formate/glycerate dehydrogenase catalytic domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-1278">Translocase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="Alanine dehydrogenase/pyridine nucleotide transhydrogenase N-terminal" evidence="7">
        <location>
            <begin position="55"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16349" checksum="530D39889872D9C3" modified="2025-10-08" version="1">MLRFYKRMAVFEGRRSGPMAFRRNFGCVLNGRPLDSLTIGIADDTKEADPTPYIDPENIKLFTDLGFKINVEASAGKSAHFSDKLYELSGAKITDSETALKSDLIFKSNPPNLDQLKHLTPKSVVFWFSLIFIIFDFIDFFDLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW7</accession>
    <name>A0ABV2AHW7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">DHX35_1</name>
        <name evidence="1" type="ORF">MHBO_001137</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000244">
        <property type="protein sequence ID" value="MES1919279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10284" checksum="129D09EEF15EEDDE" modified="2025-10-08" version="1">MSSRYKVLPTFKNESNSAPNEYWKPGAAAPGTDILQTEENFFVYNPKAHLAINSQKRLLPIANRRNELLYAVETHSVTIVVGETGSGKTTRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI78</accession>
    <name>A0ABV2AI78_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">E3 ubiquitin protein ligase</fullName>
            <ecNumber evidence="14">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">HUB1</name>
        <name evidence="16" type="ORF">MHBO_001224</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 14">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 14">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 14">Belongs to the BRE1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="14"/>
    <dbReference type="EMBL" id="JBDODL010000273">
        <property type="protein sequence ID" value="MES1919381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013956">
        <property type="entry name" value="E3_ubiquit_lig_Bre1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23163:SF0">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE BRE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23163">
        <property type="entry name" value="RING FINGER PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13920">
        <property type="entry name" value="zf-C3HC4_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10 14" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="11 14" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 14" id="KW-0539">Nucleus</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 14 16" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 14" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="9 14" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 13 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="15">
        <location>
            <begin position="175"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU365038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1919381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25934" checksum="835DA26F3E7C6D4D" modified="2025-10-08" version="1">MIMCKTFMSSRPFGGDLSLKGCKKGKLCERAHGNEDLRPGRNDHQKFNSVEKSFFKQAKEEIGEGDNRSGKKLNLDSIDFLNVDFDLSNIPEEGEGESVEIAKMRKELESVTSKCKELTESYKKNYYDIVDAVTKRIEKETKEMRLSCKEEVRYLEKLAKKRLEEMDDLRFRLKCPLCHNRNRNAVLDPCGHLFCAQCYQKTNIKECFYCGLKCNSIILIKSKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC3</accession>
    <name>A0ABV2AIC3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Tyrosine-protein kinase ephrin type A/B receptor-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001266</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000287">
        <property type="protein sequence ID" value="MES1919429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.220.10">
        <property type="entry name" value="Hormone Receptor, Insulin-like Growth Factor Receptor 1, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009030">
        <property type="entry name" value="Growth_fac_rcpt_cys_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57184">
        <property type="entry name" value="Growth factor receptor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="142" mass="16501" checksum="0B6E81BC444EAAF8" modified="2025-10-08" version="1">MLCPPGNYADANLSACLPCKQHLFLNVTSGNCEECLENKFPNEDNTDCIIVCPDQYWPNLDAWQCLKKPLIRLTWWQHITIAWLALATIVLLGIFIFWNYPFYESVDLPFAPDEDFSDYYTDVEIKNVEVFLNEQDILVVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG0</accession>
    <name>A0ABV2AIG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001089</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000232">
        <property type="protein sequence ID" value="MES1919229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16846" checksum="3638F82B6D9A73E2" modified="2025-10-08" version="1">MEEKSTERKDKILKYFFRDQVVTYNKNFSGILLNLAVGLIRVLLLLPTMRHFAFSIPFYIKAISDNYFNFNTFMGFVVVVQFIVEAPVCVLIMYDSLSCGWVLMSYGDFVERMKINIISEWVGLGGDIGLFAFRCMLWSVLVPFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG6</accession>
    <name>A0ABV2AIG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DnaJ subfamily C member 7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DNAJC7</name>
        <name evidence="3" type="ORF">MHBO_000916</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000185">
        <property type="protein sequence ID" value="MES1919042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050817">
        <property type="entry name" value="DjlA_DnaK_co-chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24074">
        <property type="entry name" value="CO-CHAPERONE PROTEIN DJLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="143"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="25576" checksum="BCA9D16661E0C069" modified="2025-10-08" version="1">MLFRYLLSKRHYILNKGISRKQRTLLIKYDRRNINIVPVIKLIIRMVPIVLPFIVSAFNTFRRTKNGQDFMKSLHPAARKFLESISQNANPNKNDNFGYGPFDQSDFGKTYGGSNFNYQNGQYKNQQNYYEHQKQSTKKVRKDYYNILGLQKNCSKQEIKRAYNLEVKKYHPDRNPNAAETERKKNNKKFRDAVEAYTVLMDDTKRREYDLQYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW4</accession>
    <name>A0ABV2AIW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001427</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000347">
        <property type="protein sequence ID" value="MES1919630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="124"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21513" checksum="3EBABA17619B2181" modified="2025-10-08" version="1" fragment="single">MTGKNEILTENTKVPKRKQIIDEKGENYKKQKLSINPPKVSDEEEARLLNLPAEERVLQLNKMDNKDLLEAVTEVISLKNFEMDNLVLLGDALPESARKEAIAFCSEVYKQKMIVQRRVKEINNQKQKIDEKEKTDEKLEKDTQKTDEKLEKDTEKIDEKQKQIDEKQKQIDEKQPKKDFDEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJH4</accession>
    <name>A0ABV2AJH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000353">
        <property type="protein sequence ID" value="MES1919644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045846735" evidence="1">
        <location>
            <begin position="18"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14374" checksum="64146477CF5B1299" modified="2025-10-08" version="1">MVFSHLSLVVFIRLVSSYGKAWQYGPPIESKLYEQRCLNLSKRMCTFDDLSDFFTEQKNLCEHAWIYPFYKTDSAYNVNFNYPGNNCGDYNVINSDNYKDAELASWCCESSYYKMAFSPKLAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR7</accession>
    <name>A0ABV2AJR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">tRNA (Cytosine(34)-C(5))-methyltransferase</fullName>
            <ecNumber evidence="8">2.1.1.203</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">NSUN2</name>
        <name evidence="8" type="ORF">MHBO_001669</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.203" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000446">
        <property type="protein sequence ID" value="MES1919926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049560">
        <property type="entry name" value="MeTrfase_RsmB-F_NOP2_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001678">
        <property type="entry name" value="MeTrfase_RsmB-F_NOP2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057285">
        <property type="entry name" value="Pre-PUA_NSUN2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22808">
        <property type="entry name" value="NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01189">
        <property type="entry name" value="Methyltr_RsmB-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25376">
        <property type="entry name" value="Pre-PUA_NSUN2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02008">
        <property type="entry name" value="RCMTFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51686">
        <property type="entry name" value="SAM_MT_RSMB_NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM-dependent MTase RsmB/NOP-type" evidence="7">
        <location>
            <begin position="1"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="136"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="136"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="410" mass="47569" checksum="B528DC11DC3788FB" modified="2025-10-08" version="1">MHRLQLLIAEHGYNLLRPGGIMVYSTCSLNPIEDEAVVAALLTRSNGELELMDVKQDLPNFRTRPGLSEWKVFVNDEKEFSDFSEVSGKDKSKVKKTYFSNKKYSQLALEKCARVLPHDQNTGGFFIAKLRKKIKNESKNDENESKNGENESKNGKNELKNDKNESKNGENEFLIDKNESKNDENEFLIDKNESKNDKNEQKNGPKPKRIKINPKNCVFKTIDESLKEGLSKEYGIADHKILKQLFYRTDSKDDSSNPRKIYYLPSNLIEYLKSNNSKIILAGICLFVRENRKSFDGIFNYRFLQQSIDFLEPFINRKKIECSFETIERFLKTESNFINLTQIDSVFTERMEKEIAGTYLLSYKTQINGTEEKISVVVFYKKTGFEMMVGKKVLQPLRRKLEWIGKSKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK65</accession>
    <name>A0ABV2AK65_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">ADP-ribosylation factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_001789</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 12">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the small GTPase superfamily. Arf family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000500">
        <property type="protein sequence ID" value="MES1920066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04150">
        <property type="entry name" value="Arf1_5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045872">
        <property type="entry name" value="Arf1-5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024156">
        <property type="entry name" value="Small_GTPase_ARF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006689">
        <property type="entry name" value="Small_GTPase_ARF/SAR"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11711">
        <property type="entry name" value="ADP RIBOSYLATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00025">
        <property type="entry name" value="Arf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00328">
        <property type="entry name" value="SAR1GTPBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00178">
        <property type="entry name" value="SAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8 12" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 11" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="10 12" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4 12" id="KW-0519">Myristate</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU369003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1920066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="21504" checksum="8ACA35F06E548164" modified="2025-10-08" version="1">MGISLTKIFSKLFGSEERRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVDYKNIKFTVWDVGGQDKIRPLWRHYYQNTDGVIFVVDSNDRERIAGNNSEEEGSNAREELEKMLSEDELKDAALLVFANKQDLPNAMRVPEVAEKLGLQEIKNRKWHIQGTNATNAEGLYEGLDWLSAILKEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK86</accession>
    <name>A0ABV2AK86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001807</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000508">
        <property type="protein sequence ID" value="MES1920088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13631" checksum="37F3A5035462391D" modified="2025-10-08" version="1">MPKKSAVANFVFRPKRYNLVTDKMAAKRISKMLLNPRIRHRYFAIDTETVGCDPTFQSPCKMAYMISASIYCGPDVNFGNGPYIWIENINEHLIKYFQPFFADPTIKKVSLHSFTINC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKJ5</accession>
    <name>A0ABV2AKJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">T-complex protein 1 subunit theta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CCT8</name>
        <name evidence="6" type="ORF">MHBO_001888</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000543">
        <property type="protein sequence ID" value="MES1920191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="entry name" value="TCP-1-like chaperonin intermediate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="GroEL apical domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="GroEL-intermediate domain like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00750">
        <property type="entry name" value="TCP1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="487"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="487" mass="52901" checksum="BD123E2F1288E2DE" modified="2025-10-08" version="1" fragment="single">MIKNMRSGMPSLFKKGSKSFEGLASTERSLKAVIKLAEMIETSFGPNALNKIVINSHDKISVTSDTAAILENLEINHPVAKMVVGAAKMQEKEIGDGSNLVILFAGELCKIAIDLIKEGVQINDIVEGYSMAIGMVPSILDSIKRAEKKESSKKIIKTAISSKIHGFENRFADLIADGCLAVSKDDYKNIGFDVDSIRTKQVAAGSLRDSFLSFGIVVNGDFEAIGPNNADFEIKDAAVCVFNGSVDAQTTETKGVVLFENAEQMLNFNKDEEKRVENSIIDLKNLNTKLIVTGGKFGDIALHFMSKHKIAGLKISSKFELRRVAKLVRCRAVPLFGEKVDKEDLGFLKIARSKEIGSKKLVFLEQDRKDAQFATIVVRGATESFRESGEKAVDDGVNAIKTASKDQRTVLGGGASEIQMATRMRSEKQFGESEMALRFGVDGFASALEAIPRRLAKSAGLDDYAKVAEMVSVHSKSPDAVLGVSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW9</accession>
    <name>A0ABV2AKW9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001995</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000605">
        <property type="protein sequence ID" value="MES1920312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13920">
        <property type="entry name" value="zf-C3HC4_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="UBA" evidence="2">
        <location>
            <begin position="105"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="3">
        <location>
            <begin position="286"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="341" mass="39644" checksum="CFE602962A3E4C4B" modified="2025-10-08" version="1">MLEISYLKNRPLNSFSTIEDVVKILRRSEKISSFEELDLEHVLSQFPYQTVNLLTLMDSSDWQQIDLPLICKLLLKKIMKQCAPLKKLFCIESEFNGGRKINLYPLNRPIEYFVSMGYDRFEALKALVATNLESKETALKYLSTKKESIELQKNFLENCSKHYSLRNRLFSSANTNKQTDTITLEQNIFLLKKRLLLEIRNSEGIEEKIFRQTRENEIDVYCAFLEGIISASNLNVEFLGRIDKYRRDRNINKEVHYKSLKKLGTTEEALKNMTKCEDEAEIANNCSICFEGPKTHLILGKKMCMHLCLCGKCSKAVLNTENPRCPVCFDDIVRIQMVKFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL22</accession>
    <name>A0ABV2AL22_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001812</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000510">
        <property type="protein sequence ID" value="MES1920093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050505">
        <property type="entry name" value="WDR55/POC1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44019:SF8">
        <property type="entry name" value="POC1 CENTRIOLAR PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44019">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="51"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="174"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25335" checksum="E0EF7162607A4C8B" modified="2025-10-08" version="1">MSLSELTPKNTIKSFCTDGKIVYEKDQDFILGRCKGDIVFISSKTLDVEKTISHSEQDPFVAFDCKNGLLLAANKSGFVKLWDLDTSSFRKTLVSRFKNLSDIKISPSGELAALASFKNVVKVISISEGYVKQQLILKNSLNKLFWKDDFTILCCANDGNIIKWDLKTKLSQNRQNHYSAVTSLRFFESEGENLILSSARDKIVTLWKSENLKILKTFLVQEVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL45</accession>
    <name>A0ABV2AL45_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001876</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000538">
        <property type="protein sequence ID" value="MES1920174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="186" mass="21577" checksum="22611032E59EB8C3" modified="2025-10-08" version="1">MDKFSATRKRVMAYSCASIFLITMSFNIIFAIYFPTKSMSFIIGTLFTNLIAFVFFALVTSYYLRNQIKLGRNIFIFLVFFFICLYTANYSYMIFAVLQAVIANKIDIGDFLIILSVTSDITVYRNLFIENKHLLSYFNFYQDKVFILVSMITFALSVFVVNISLAAKNLFILHKSEEEGKTVTFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL95</accession>
    <name>A0ABV2AL95_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PPP2R1A</name>
        <name evidence="2" type="ORF">MHBO_002072</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000647">
        <property type="protein sequence ID" value="MES1920397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051023">
        <property type="entry name" value="PP2A_Regulatory_Subunit_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648:SF4">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17867" checksum="E3CC300BB4CA24E0" modified="2025-10-08" version="1" fragment="single">ELENFDEKFFREVESLLVDKIYRVRKEIGVGITKIYEEISPEKFNAIFWNRIVDLTNSKNYLHRSSALFILKVFKIDSQSLCKVMDKDQVLTLLPVLDKMRKDKVPNIRMHSAICYKRIAERFKDVATTVELALEELRKDSETDVVNAMSFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC9</accession>
    <name>A0ABV2ALC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">AP-2 complex subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">AP2B1</name>
        <name evidence="7" type="ORF">MHBO_002138</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the adaptor complexes large subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000688">
        <property type="protein sequence ID" value="MES1920473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026739">
        <property type="entry name" value="AP_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11134">
        <property type="entry name" value="ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Clathrin/coatomer adaptor adaptin-like N-terminal" evidence="6">
        <location>
            <begin position="15"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="295" mass="33088" checksum="9AC4AA31595CE253" modified="2025-10-08" version="1" fragment="single">MYSTNTSNFFESNQKGEIYELRKDLNSVDRGIIKNAVKKIIEMMSLGEDLSQLFPDVIKSLSTKDLELKKLVYLYTIHYAHKQPEKAILVVNTFQKDAKSHPNPLMRALAIRTMGCINVEKITEHLCDPLSDALSDSDPYVRKTAVICVAKLFKINEEMVIEKGFLDRLHLCLSDSNPMVVSNAVAAIENIAKKRPSILSKISPSNCRQLVSAINECTEWGQVYILEILAICFNKISDPVFVLERIAPRLSHSNPAVVLSAVKLVTILAKGLKNKENVFLEKIRPSLITLLCSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN6</accession>
    <name>A0ABV2ALN6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Nucleotidyl transferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002228</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000742">
        <property type="protein sequence ID" value="MES1920569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.10.10">
        <property type="entry name" value="Hexapeptide repeat proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056729">
        <property type="entry name" value="GMPPB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050486">
        <property type="entry name" value="Mannose-1P_guanyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22572">
        <property type="entry name" value="SUGAR-1-PHOSPHATE GUANYL TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25087">
        <property type="entry name" value="GMPPB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleotidyl transferase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="Mannose-1-phosphate guanyltransferase C-terminal" evidence="3">
        <location>
            <begin position="242"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="349" mass="38905" checksum="CE7E39933B557683" modified="2025-10-08" version="1">MQAVILSGGFGTRLRPLTFSCPKPLIPLCNVPILEHQISALSMAGVKKILLAISNNAFSFEKLQLFVEMAQRKYRVKIVLSVEDEPLGTAGPIALAERHITTENFFVLNSDIICEYPFGKMFSFHIEKKALGTIYTVTSKSPWKYGVVLFEKESGKILNFEEKPKNNIGNTINGGIFCYHRKIFDYLKVTKMSMEREVFPILAQESKLFSYASEEKETFWMDIGQPKDYLAGTNLYIDRLGGKPIIGQNVIIGEGANIENHVVIGDNCVIEEGVVLQNCVLFSGSIIKKSSSVAGSIIGWDCVVRENSKISDLSILENNVIVLEKSVLEKVIVCSHRSVEGFVRDKIVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM51</accession>
    <name>A0ABV2AM51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002386</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000841">
        <property type="protein sequence ID" value="MES1920746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10131">
        <property type="entry name" value="TNF RECEPTOR ASSOCIATED FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10131:SF94">
        <property type="entry name" value="TNF RECEPTOR-ASSOCIATED FACTOR 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="2">
        <location>
            <begin position="18"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="26149" checksum="CC38021699B50803" modified="2025-10-08" version="1">MGLENKMFLENVSPELNCSICHLVLENPPSCKEGHLFCLKCISKWFFEKKINNSKILIEKRILIKSNCPVCKKDLLSSALNKSILAKKMIGRLKSKCKNNFFEYSKLDKECKWTGLYENFSDHDKNCPNRPYKCEKEHIFPFQNLLSHNANCKKTSKPFKEVFKNKIDLIDFSEPFGISNFSFSIAIFVVDKMQRRHIFENEASLCPQSLKWKVERFDKNIFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD4</accession>
    <name>A0ABV2AMD4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002456</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000893">
        <property type="protein sequence ID" value="MES1920824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="155" mass="17362" checksum="E3691A11C754FFFB" modified="2025-10-08" version="1">MAFSNFIIQSILIYAKITNSQFCLNSLGSSSRNTFQVENDCSGSLLCTEYCVPGFKRKGGSYQRKCDTSTNLWAGAPLVCELKECSIWTPSEEFENMRIMDLKCIENGVCQLGCKKGYSKKAGNDVMECVLDVKDNNPFRKWSFTNSTGNFKCGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ2</accession>
    <name>A0ABV2AMJ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein L10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002512</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000938">
        <property type="protein sequence ID" value="MES1920895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001790">
        <property type="entry name" value="Ribosomal_uL10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043141">
        <property type="entry name" value="Ribosomal_uL10-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00466">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160369">
        <property type="entry name" value="Ribosomal protein L10-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="210" mass="24420" checksum="768C423B662379A0" modified="2025-10-08" version="1">MKYGNTFAKITQKSSFKAIKSPFVSPDEKTRHIKRLTYHFNYQKHKSVFKNNKFVLFFSFYNTNGYSWDKKRIELASQNIFILFVKPKMAQKAVINTPCEPVKNVLTQNTFVAYWESSPEKIINDHSESSKIVHSILEHPGTFLLCGIFGNKVYYGDKLTQTLAINKNSPTIEMVQALNFYSPISIIKICRAQVVQMLRSLKWFIEEKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS1</accession>
    <name>A0ABV2AMS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002568</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000986">
        <property type="protein sequence ID" value="MES1920968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15750" checksum="452F0E815D080ABD" modified="2025-10-08" version="1">MSESTNDKKTLLQSPNIKVSIERRKSAQVERLRIEETSGLPDPERELGFKDCEIEQEKQLSRRRKSNEIEKRLLKGRKEDPTRDPLVDQILQKEPGISVEKITILNEKGKPRRKTVCVERAVVKKGRSFRRLSEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS7</accession>
    <name>A0ABV2AMS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Meiotic nuclear division protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">MND1</name>
        <name evidence="9" type="ORF">MHBO_002549</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the MND1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000973">
        <property type="protein sequence ID" value="MES1920945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040661">
        <property type="entry name" value="LZ3wCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005647">
        <property type="entry name" value="Mnd1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040453">
        <property type="entry name" value="Mnd1_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18517">
        <property type="entry name" value="LZ3wCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03962">
        <property type="entry name" value="Mnd1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026991">
        <property type="entry name" value="Mnd1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mnd1 HTH" evidence="7">
        <location>
            <begin position="15"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="Leucine zipper with capping helix" evidence="8">
        <location>
            <begin position="149"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="78"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR026991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="24273" checksum="3A44A90B5B86A55A" modified="2025-10-08" version="1">MPKRGLSLEEKKTMMLDFFHKNQTVFTLKELEKSIPKNTKIGSMSVKEVLKSLVDDSKIDSDKIGIGTYYWAFKGKAFQAEKTRNENIIKNIEQLNETEKRLKNDLVHLKNDRNGEKRSENLKKLKRENQIVNDLEKEHDFLVQNDPIVLENQKQKLKQLVEGINRWTDNVYTLLKHIKDKRPDISEEQVFKYFEIPSDFDYVEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT7</accession>
    <name>A0ABV2AMT7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002459</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000894">
        <property type="protein sequence ID" value="MES1920829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="248"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="116"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="256"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="272"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="284"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="306" mass="34948" checksum="ECB32443663B0B52" modified="2025-10-08" version="1">MDKNDLLHSTLHFIEKLKDENNKAQSEAIQVALECLSEALDFPLQEISSAPKYKIDDVCLQKTAKTKIAKISDSENLTEKAENLKNGGKFRQAIPVTVEALKRDPFDLKVILPINAEKARTLLADTLLELNRLEEAKSDYEMALEIASKQKKSHQKSDEALKDLTSKLENVVAMINYRKRRQRVDEENSRFRSAVDKKDLPPKDIEKNIGKFLSDKKSLDKIFENEKFQNLAQNMMQNPFMQNIMKDIFPSQQPPNFGGNDNDLNNSFNENKTNIVTGQNGQNIEKENGSDLNEIDKSDVKNDYKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU9</accession>
    <name>A0ABV2AMU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005279</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001006">
        <property type="protein sequence ID" value="MES1920996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="26350" checksum="BB9601DA1C0C6B15" modified="2025-10-08" version="1">MLNKSPNNVKALKSEKALTTKTNLLKSLSIFTKKQNDFKLPTFYKHVQKPFLPNLKFSKIECENFVNANFQISKIDKERKDVYSDRSAKLKFFRELQNFSKFGDFPELEKVKIPENMKILAKFKNYANSIFFKATKKFSDLVENFSSKNVEKTKKYCRFWADFCLNFMQNCLKIIYCLNSMVQNLENDDIERFLKNASEFLFFRNLLIFELPNRFFILTIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW4</accession>
    <name>A0ABV2AMW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002596</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001002">
        <property type="protein sequence ID" value="MES1920991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13387" checksum="E447009DE561144F" modified="2025-10-08" version="1" fragment="single">MRHFFDNRSFVLRHTTTVLTRSLILGCISAPAGLIAFLANQILDENYFNRLSRKIDKWLINKNVDSTISTSLSQIPSFLKISILLFFVNRYIAPFSNAAFFASFVFFEPFKKRLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX9</accession>
    <name>A0ABV2AMX9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Cytochrome c oxidase assembly protein COX15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_002611</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>Fe(II)-heme o + 2 A + H2O = Fe(II)-heme a + 2 AH2</text>
            <dbReference type="Rhea" id="RHEA:63388"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:60530"/>
            <dbReference type="ChEBI" id="CHEBI:61715"/>
            <dbReference type="EC" id="1.17.99.9"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="11">
            <dbReference type="Rhea" id="RHEA:63389"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="10">Porphyrin-containing compound metabolism; heme A biosynthesis; heme A from heme O: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001015">
        <property type="protein sequence ID" value="MES1921006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003780">
        <property type="entry name" value="COX15/CtaA_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023754">
        <property type="entry name" value="HemeA_Synthase_type2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23289">
        <property type="entry name" value="CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23289:SF2">
        <property type="entry name" value="CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02628">
        <property type="entry name" value="COX15-CtaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="132"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="162"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="200"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="245"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00044501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1921006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="275" mass="31564" checksum="C5879A48D9959DAE" modified="2025-10-08" version="1">MSLTRFREVFKTRLNLSNFSHLRLLHKRPFNVQSSQISFNIPNGQNKVYKWLFVCSGVVFTMVVVGGVTRLTRSGLSMTSWKFLGQKFPFNQKMWEEEFARYKTFPEYKKLTSEMDLNGFKKIYVMEYLHRMLGRLLGLVFAVPAVYFAARGFINRSIAKKLSLLFLLGGSQGLIGWWMVKSGLDEKPSTHLDLPRVSPYRLSVHLVSAFVIYLALVKTGLNSLDLHLLSQNRFKTFLSKLPPIFLRRSVLVTSLIVFMTAFSGAFVAGNEVRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN58</accession>
    <name>A0ABV2AN58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Immunoglobulin I-set domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002682</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001078">
        <property type="protein sequence ID" value="MES1921096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036179">
        <property type="entry name" value="Ig-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013098">
        <property type="entry name" value="Ig_I-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07679">
        <property type="entry name" value="I-set"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48726">
        <property type="entry name" value="Immunoglobulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Immunoglobulin I-set" evidence="1">
        <location>
            <begin position="30"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16950" checksum="4CFC76490E18BBE1" modified="2025-10-08" version="1">MDQLRAFVDPPKISISLHYDCEIKKCTVSAEVETKWPVLSAKWQKDQHNISISGNVSEYVDKEKDYLLFIRYCQRKDEGLYRMVAETVAGRSYSKEINFEIEGIVHVTVVIALVYSDKITVARYVDEWKVLIVSFGLGKFSPYVNDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN91</accession>
    <name>A0ABV2AN91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002693</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001090">
        <property type="protein sequence ID" value="MES1921110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PROTON/GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865:SF7">
        <property type="entry name" value="PROTON_GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="31"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="224"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="294"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="331"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="366"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="463" mass="51109" checksum="AF90EFE5725DD556" modified="2025-10-08" version="1">MERTESNLNSSPSNKKSLWILVKPFTSPPSWLPSIVAIVLGIFVGICVKMLKLRSQDVVVQVMGAPGKIFMNCLKCVIPLYVVLMMMRSMFKIKNLKKANRFISLVLLFYQKSFFAFVLMSSLTCFIPVLLMWAIKVEKIDGGVIATRHPLLNQNGNVSMVQSIVKMFYLSIPDGFIGSLVKNNLMGSMVLGSIIGLALSGFANTEKGHRYEQFLNSIFKSIEDVISILIKLTPIGLYSIMVDQMSTMKSLNVFKSIGQLLGVLVLSNVIYTAFYVLLQVAFIKKFYVLSLKKFISPVINGVGIASGVSVLPEIKRIATDKLGYDNLKTELYLSIGNVMMKNGTSIYFCIMTIFAGEMTSNPLGKFRAIVFCFVAALFSAACPPMPMGSIINISAIAGIFNIKIPPELFSVLLAVDPIFGRINTYGNIAGPIFNLNFVMKFSGEQKNNGNIVGDLNEKLNVIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANB5</accession>
    <name>A0ABV2ANB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">proteasome endopeptidase complex</fullName>
            <ecNumber evidence="3">3.4.25.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">PSMB6</name>
        <name evidence="9" type="ORF">MHBO_002729</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Cleavage of peptide bonds with very broad specificity.</text>
            <dbReference type="EC" id="3.4.25.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001113">
        <property type="protein sequence ID" value="MES1921154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000243">
        <property type="entry name" value="Pept_T1A_subB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF0">
        <property type="entry name" value="ATP-DEPENDENT PROTEASE SUBUNIT HSLV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00141">
        <property type="entry name" value="PROTEASOME"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="8 9" id="KW-0647">Proteasome</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0888">Threonine protease</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="22914" checksum="CDF302AD5BDC6D91" modified="2025-10-08" version="1">MSGNVENKSGTTILAVKYKGGVIIGADTKAAYGSYVWSRSASKIVPLTDDIHAALIGNMAILQAVASYSQYYLDILESEMESKASVETAAKVARKILYDNKQNINGSMIVAGFNAKNKKPEIYTIPFGGALIEQEFAIAGSGAAYLQGFCDSAFKRDMSKDECEEFVSKAIAHAIARDSSSGCGVRLVVVSEEGTSKKIIGHPDLPFLLENGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND9</accession>
    <name>A0ABV2AND9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002468</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000903">
        <property type="protein sequence ID" value="MES1920842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044633">
        <property type="entry name" value="CstF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44133">
        <property type="entry name" value="CLEAVAGE STIMULATION FACTOR SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44133:SF2">
        <property type="entry name" value="CLEAVAGE STIMULATION FACTOR SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="15"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11606" checksum="5F6EBF1FE12C12CF" modified="2025-10-08" version="1" fragment="single">MSNFYPNRMVPNYPNQYPQNSFSGNNNFPNQFGARYPPQMPFMPSEPFSSAKNPLSAVLTKFIATHKDVCRVGVFSKDGTLAATGSSDTSIKLLDVSKMHFHNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE8</accession>
    <name>A0ABV2ANE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002746</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001128">
        <property type="protein sequence ID" value="MES1921177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="317" mass="36592" checksum="75EF4FD5D3119860" modified="2025-10-08" version="1">MDNDFFVETVLLKNGKFQSKINSHLIRTKNVKHKGISVLLPLNFKKSNYLVDSEVPNATFSGKDHFGFKLTFTPTGDAADFKIKNLKVCSEHVFNLTKPSNSSKQLIQNCSRDLKPFISKSLSNIWETQSIKICLLVPKSYKKGELCVLTNSYKTCKTLAPILLEEDTNECLITNCAIFPDRLLKKKIIYNHVLMTPKLIYKKENSEYEAIGTANFVRKEEGDVYFKGDLHKGVKYRWIFVSSQVELFHKQRRSILMELMTRIPVKDKKPLQVTEEKDFRSVHLFSADKFNDYNVIAFTNPELCGIDTILKVLFYKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG0</accession>
    <name>A0ABV2ANG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000998">
        <property type="protein sequence ID" value="MES1920984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13613" checksum="557A9D6092CC5800" modified="2025-10-08" version="1" fragment="single">YNDPELLRMATLDMKRRVSEVLREKLMIAHRMINNEEAAEITKIEARKLVAELSATQQVIEEQLVASELSELPNTGLSARSSVDNMLELQQTVGSGLISDMVEHMVKEGELLRQWRRHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH2</accession>
    <name>A0ABV2ANH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002779</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001163">
        <property type="protein sequence ID" value="MES1921216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046868534" evidence="1">
        <location>
            <begin position="20"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="26305" checksum="ED76EFF01573AAC7" modified="2025-10-08" version="1">MNFNFVILSYLIFISQACSKNGPKPQDGIEVRKSATQPVIHDKTYSPGRYQLTAVKDFLVIQAIGSLFKSGYFNCHENGNWDMTTINSCSEGSKGKGIKLNAYVDSNGVCDYDYPTIVADFTKEMCLYKIPKDATLLGPTENVFTMPSGQKAVIGKGPFVVACGDDSFVNNTAAAISATAVYCKDGKPDYVVTCIKRMDYLGQLHTVSFIQMGTVSLFAGSLVTSGFLGGLSYRLWISLHSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS4</accession>
    <name>A0ABV2ANS4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">VASt domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002869</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001249">
        <property type="protein sequence ID" value="MES1921325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031968">
        <property type="entry name" value="VASt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16016">
        <property type="entry name" value="VASt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51778">
        <property type="entry name" value="VAST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VASt" evidence="3">
        <location>
            <begin position="74"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51778"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="32097" checksum="20A77EAA848017C6" modified="2025-10-08" version="1">MINNKKHAKCSFVFASVFNATKHLRVIENLIKSRNIPFNTAVIFSNKKSSSNIISSDESMSNISEEFEDLKNVSMENLFEIEYPINSEKFYQMVFSNNSTYSLIDFFNEEDGYSNIKISKWQFLNKMHVRNISFEYEMKDIPFLMKSIASNIKVSRIEKLIKNKNSFSLCVNIQTPEISYGSFFEIFHLYSVKNISKNKSNLIVKYGIKIIKRIPFLQNKIVKKSYYQNKEILVKYFGKLKSIIGNSKIENEKEIKKNSADLHQNPHPFLNRHC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANU1</accession>
    <name>A0ABV2ANU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">PQ-loop repeat-containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PQLC1</name>
        <name evidence="6" type="ORF">MHBO_002880</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001261">
        <property type="protein sequence ID" value="MES1921343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.290">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006603">
        <property type="entry name" value="PQ-loop_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052241">
        <property type="entry name" value="SLC66/Scramblase_ANY1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14856:SF9">
        <property type="entry name" value="PQ-LOOP REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14856">
        <property type="entry name" value="PQ-LOOP REPEAT-CONTAINING PROTEIN 1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04193">
        <property type="entry name" value="PQ-loop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00679">
        <property type="entry name" value="CTNS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="65"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="123"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="210"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="27478" checksum="8B2A7A58D21735F2" modified="2025-10-08" version="1">MESFDGKVLADFISGAVLIFGTNVAFIPQYIKIEQSGSSALSKYVCLVFITSSVLRLFFRIGEEFSIYLVLQSIVAIFTQLILLEAIVTKENKKNLNDMKTKNFWQIFSLKGLNKEFWNWDNFYDFVMAVALFNIIMASATYLFGTYNFYFQIIGTLSLALDCTVGLPQLYKNFKNKTTKGLSVVLIFYWVLSDVCKAFYYQMIEVPLQFVIAGGVQIMIDFLLFWQCLFYEKKLFSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV5</accession>
    <name>A0ABV2ANV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DHHA2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002882</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001264">
        <property type="protein sequence ID" value="MES1921345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.310.20">
        <property type="entry name" value="DHHA2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1640.10">
        <property type="entry name" value="inorganic pyrophosphatase (n-terminal core)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001667">
        <property type="entry name" value="DDH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004097">
        <property type="entry name" value="DHHA2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038222">
        <property type="entry name" value="DHHA2_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12112">
        <property type="entry name" value="BNIP - RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12112:SF39">
        <property type="entry name" value="EG:152A3.5 PROTEIN (FBGN0003116_PN PROTEIN)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01368">
        <property type="entry name" value="DHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02833">
        <property type="entry name" value="DHHA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01131">
        <property type="entry name" value="DHHA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="DHH phosphoesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHHA2" evidence="5">
        <location>
            <begin position="239"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="421" mass="49675" checksum="067ED534EF89F773" modified="2025-10-08" version="1">MHIDLNKYFFAVRNRFYSGDYNNVFFCLNNESCDLDSFTSSILLSIFLDKTPKFVRQNFVVSSNQKKGNLFVPIFNLKQKHFKIRKDLTFYVEKMSIDKNNLIFVDDFYFKNIQNKNFFICLVDHNRLSHKQRHLFKDVVFVIDHHFDECALGSNHKIIEKAGSCATLIFDLISKNNKNLFQNIVATESTNLLLSSTIFIDTNNFNPLLKNNFSSKDVNYFNILTKFHTTNLDIRKNFIEKMAKMKDDYGNLTNYEILRKDRKTINFNVKKIELNVSISSIKSLFSKNILDEMAKNLKKKNLKIKSCESICKRIIFSVAMFINYENLAKKENSQNCSQKLNLKRQLLICGEKTKFWNFGKTEKFLNCLNEIDKNCYFVKANFSEFDFDENIVFVLLEQKNVSYSRKKIIFILKKAFSDFFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP25</accession>
    <name>A0ABV2AP25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002957</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001339">
        <property type="protein sequence ID" value="MES1921424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="12106" checksum="758C6C6D48512627" modified="2025-10-08" version="1" fragment="single">MSNRQVYLAEIRDGSNENIESRRRIARKCRLVGLEYNTNQRSNNPTLEHPSFRNSYPSQQQIYQSFNPFGSFLLPPTTLFHPFQSSFMMPYQNFMDPYQNSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP91</accession>
    <name>A0ABV2AP91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GPN-loop GTPase 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">GPN3</name>
        <name evidence="6" type="ORF">MHBO_003023</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Binds to RNA polymerase II (RNAPII).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the GPN-loop GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001416">
        <property type="protein sequence ID" value="MES1921495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004130">
        <property type="entry name" value="Gpn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231:SF7">
        <property type="entry name" value="GPN-LOOP GTPASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231">
        <property type="entry name" value="XPA-BINDING PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03029">
        <property type="entry name" value="ATP_bind_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14388" checksum="72621A85D67D014A" modified="2025-10-08" version="1" fragment="single">MGKHGQLIMGPAGVGKSTYCKIMSEHFEVSKRKVNVVNLDPAAEKFDYPLLADIRDLISVDDASELLKLGPNGSLVFCMEYLVENIDWLLDSIGNYEDDYILFDCPGQIELYSHYPVMRQIIDQIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL0</accession>
    <name>A0ABV2APL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">CDC5 cell division cycle 5-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">CDC5L</name>
        <name evidence="11" type="ORF">MHBO_002830</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CEF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001212">
        <property type="protein sequence ID" value="MES1921277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11659">
        <property type="entry name" value="SANT_CDC5_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047242">
        <property type="entry name" value="CDC5L/Cef1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047240">
        <property type="entry name" value="SANT_CDC5L_II"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45885">
        <property type="entry name" value="CELL DIVISION CYCLE 5-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45885:SF1">
        <property type="entry name" value="CELL DIVISION CYCLE 5-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13921">
        <property type="entry name" value="Myb_DNA-bind_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="10">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="9">
        <location>
            <begin position="6"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="9">
        <location>
            <begin position="54"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="10">
        <location>
            <begin position="58"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="108"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010506"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="25675" checksum="4D28E1EFC8CD77C3" modified="2025-10-08" version="1" fragment="single">MRFLPKGGIWKNTEDEILKACVMKYGLNQWSRISSLLTRKSAKQCKARWYEWLDPSIKKTEWSKEEEEKLLHLAKVMPTQWRTIAPIIGRTATQCLEHYEKLISMHEAEEDPNAPDPKRLRPGEIDPAPETRPARPDPVDMDEDELEMLQEARARLANTKGKKAKRKARERMLREARRLSTIQQRNELKAAGIEMQERRTREVIMDYNVEIPFQIRQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP0</accession>
    <name>A0ABV2APP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">26S proteasome regulatory subunit 7A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPT1A</name>
        <name evidence="4" type="ORF">MHBO_003174</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001583">
        <property type="protein sequence ID" value="MES1921646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048723">
        <property type="entry name" value="OB_PRS7"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21236">
        <property type="entry name" value="OB_PRS7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="26S proteasome regulatory subunit 7-like OB" evidence="3">
        <location>
            <begin position="91"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="42"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF21236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16582" checksum="094CA92E29D7FA5B" modified="2025-10-08" version="1">MVDNKTDNKKPENEKTKSEKDEDGIQNLLNERDIELLRLYNRGMYSESIKKLEKELKELSQNISETKGVKESDTGLSQPNLWDLTSDRNLLQKEQPLQVARCTKIIDSQSPKAKYVVSMTHIGKYVVELGNRVSPTDIEEGMRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW3</accession>
    <name>A0ABV2AQW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Substrate-specific activator of APC-dependent proteolysis</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CDH1</name>
        <name evidence="5" type="ORF">MHBO_003581</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002158">
        <property type="protein sequence ID" value="MES1922063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033010">
        <property type="entry name" value="Cdc20/Fizzy"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918">
        <property type="entry name" value="CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918:SF1">
        <property type="entry name" value="FIZZY-RELATED PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8516" checksum="DDE7F2A88D112512" modified="2025-10-08" version="1" fragment="single">PGLLASGGGSSDNTVRFWDTRQSSTSSIQRVDSKSQVCNLAWSKNSNEFVTTHGYSKNWVFTKNYFKPIAKNILKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA9</accession>
    <name>A0ABV2ARA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003721</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002392">
        <property type="protein sequence ID" value="MES1922210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="27469" checksum="B5B4EF3E8A9DEEA6" modified="2025-10-08" version="1">MEIPFNKIKVFINSATFRKKTPKKFDLVHSFVFGGDANPQETGKVQVAAKVDNEKTVVPINKSIMLSVTRKKGLSLKMRKAKIDFVLVQKGIFKDKKIGKCQLKLSNLVGEVDLEKKLKIENNNNVIGEIEVVASVNVPFGKLKLTNVGFKFCVVRRSENLKKMGGEKFAKVKISGEKILSEKSKIDNGENLKDLGILEERDEIDHNILGGKAKINEKISPLMINDPLKFFLTKFKKINKKNIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK6</accession>
    <name>A0ABV2ARK6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002051">
        <property type="protein sequence ID" value="MES1921997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9401" checksum="11BBE5A143ED3271" modified="2025-10-08" version="1" fragment="single">MEHKDITELNELLSTGIGFTELNGHSYIPGNCVLRALKRIRKLMATDKSLKLRKHLSKLNALSRNIIPAFLHFSDDEHISSVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN2</accession>
    <name>A0ABV2ARN2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Transketolase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003834</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002590">
        <property type="protein sequence ID" value="MES1922326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033247">
        <property type="entry name" value="Transketolase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43522">
        <property type="entry name" value="TRANSKETOLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43522:SF2">
        <property type="entry name" value="TRANSKETOLASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transketolase N-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="27469" checksum="DAB3F139604182FE" modified="2025-10-08" version="1" fragment="single">KNTTDGPTSITFSNDVELTFKSFGWKTFVIENGDSDFCEIEAILKKAIDHKNSPKLVIVNDTIGYGTEDAGTNKCHSKISNRQYQKIKNSKKFGKTGKFQICEDVLKVYKTASDRANLHHKKWQNLMQNYKKRFPKKSQKFCRIFKDKTKSEEFETFFDNVLENAKVLVEFENKPTRSISAAILELMAGFLPETIIGSADLAKSSGLILSLAKMNENLFSKENRSGRFIAFGVREHGFRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU2</accession>
    <name>A0ABV2ARU2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003711</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002376">
        <property type="protein sequence ID" value="MES1922199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="12226" checksum="92D4D79832364550" modified="2025-10-08" version="1">MKDFAFKYQCEDIVVFDYPREHRESVNYSILEHLKDGYIFSSKYESQIKHFEMKNVQVLCLSNFIPEVKKLSLDRWIIFVVENNTLRKMKDYEIQNLYNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW5</accession>
    <name>A0ABV2ARW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002751">
        <property type="protein sequence ID" value="MES1922414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="56"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="145"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="66"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="80"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="103"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="145"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="30755" checksum="87DE6FA3F6A6FFA9" modified="2025-10-08" version="1" fragment="single">MSSLENVLDECDLDHRYLKKFEEKQITIENLFDIDKSILRRVIKKKEERKKLTNWIENKRKRKSSKNSLFSRKSSNYSKKSQKNRKIAKSLKNPKKEEKSKSSAKNQKSKNSPKNEESKGLTMDDGLRKFSKLLTLSNRRSTIQFDQNLKANKTSSSKNKDSPELENLFKRRKNIKRKKEILDNKDLDNDYIDILAKFMSSSEHRTNPKIVTIDRKIFKKVPKKEDENIDNLIELLTEKFQKADFKDEKLEKPQILDQAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ5</accession>
    <name>A0ABV2ARZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002827">
        <property type="protein sequence ID" value="MES1922445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12758" checksum="8D605D5C3141AB95" modified="2025-10-08" version="1">MLELPTDKDGRFILARAGFRMQKEEPSFLFAPFRTKNDDFDIGFEDLSNLTFMTIHSPQNFFERNGLTDLAENLKNEIFKSFQKWNFLWEFDLKIRRKIFVKQILI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS90</accession>
    <name>A0ABV2AS90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004047</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003031">
        <property type="protein sequence ID" value="MES1922534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="235"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="31303" checksum="86383B04FF83A6F5" modified="2025-10-08" version="1">MRFRLLECHFNSEYETIEIPQNLKCFSDSKIDGAQNDGEETGLEIQQKKVQSLFAENIPPKLIDRTADFEKRMETVFAHCQKCFLMKERLKKRHSREKENLPKTKKSNGIFGFKMTKAERLKTVKVDENLAIRFAKQMEKYGNLRENRDAKTDQNLSGKQILEEIALQTSFYRFQRKVFEKTVFAAPFDELSEAQKFKVFEKFEPFSFIWSTLYESWLKNASGVRKSERIGFLQYFFEFLKFLVIWILISVIDWIYFYIIYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC4</accession>
    <name>A0ABV2ASC4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fibrobacter succinogenes major paralogous domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004093</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003136">
        <property type="protein sequence ID" value="MES1922578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011871">
        <property type="entry name" value="Fib_succ_major"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02145">
        <property type="entry name" value="Fib_succ_major"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09603">
        <property type="entry name" value="Fib_succ_major"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fibrobacter succinogenes major paralogous" evidence="1">
        <location>
            <begin position="15"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="26906" checksum="C9C4596392ECC1C3" modified="2025-10-08" version="1">MKMIDEKDGREYKVVEIGNRVWMAENYAFLGDDDEYWGMLSPRDKSHVSSYSPFVYVYEYDGSDIEEAKKLEHYKTYGAFYNYEAAVSLAPKGWHLPTLEDWVDLQQSIGMSKEEIDAYGGYLDRGNVAGKLKEPGTWTHRWGTVPANCEEGANNLSGFSALATGEGIIYDSYPEVPGWSMVGGVCNYWSTQQDPSDDCKVCKYKLIGYCDFISRCFESKNLAFSVRYVKDKENEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD2</accession>
    <name>A0ABV2ASD2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003792</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002517">
        <property type="protein sequence ID" value="MES1922282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="237" mass="28198" checksum="457091D9EFBB7205" modified="2025-10-08" version="1" fragment="single">NCKKNYRAPGTIQLARKIVIDEDYYCKKISQFSKGKTDFEIFSQREDSYEMVTHRLDITNIKNSKLKYLFLLGTEIRKKLKSSEKSFVISPRRLFSFNDGVQVLDTRIPFGSKCLKNFLQNNSKNAKMDEKIVFFLAHQILRCAFILRKIKVVHGNIDISLFYFRNLADCLNKKIVHSTDWIKWQSNFGLSLLLTRNSFLEKTFSSRKFLFSQNFDKNGFFWKDCEIFRNKEIWSWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE4</accession>
    <name>A0ABV2ASE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004111</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003168">
        <property type="protein sequence ID" value="MES1922595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10865" checksum="6B1FB2EA7E655F8E" modified="2025-10-08" version="1" fragment="single">YGVKISLGFESIWYMYTKVMITRLLQFKTFINFYSTKKALVILALTETITSSMNLDCEVEHVRNNRERLYVTVILKLVGTKCNMMMIKNQER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF0</accession>
    <name>A0ABV2ASF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">snoRNP complex protein nop56</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">NOP56_1</name>
        <name evidence="2" type="ORF">MHBO_004112</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003170">
        <property type="protein sequence ID" value="MES1922596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.4070">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045056">
        <property type="entry name" value="Nop56/Nop58"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012974">
        <property type="entry name" value="NOP58/56_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10894">
        <property type="entry name" value="NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10894:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08156">
        <property type="entry name" value="NOP5NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleolar protein 58/56 N-terminal" evidence="1">
        <location>
            <begin position="6"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="22719" checksum="0E4CDF33A4B1C8FA" modified="2025-10-08" version="1">MPKKLFLLFEHAAGFALFERIENEEIAMETETAEKAVNKIKTFTKMVELRAFTPFPSSSVASENITAISEGKSSSFLEDFLLSNLPRVKKLKKAKFQIGISDIKLASHLSENHKLPCVTSDVVRELLRGVKVHFAKFIKGLEPGELEKAQLGLSHHFSQNKVKYSEKREDNMVIQSICLLDTVDKDINSFYMRIRFVYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK8</accession>
    <name>A0ABV2ASK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003382">
        <property type="protein sequence ID" value="MES1922670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="13693" checksum="3BA0615ED4F403E9" modified="2025-10-08" version="1" fragment="single">ISFNYRKKTDIKKVENVGAKNFCKNLAIVLAETAARSGGFLESSEERIPKKIFENKKSSEFSEKEEIENVLTKIAMSSFNKNTFIKRDKNLNKSVKTSRKDNKPAPVIVVDSDNEAEGFML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ0</accession>
    <name>A0ABV2ASZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">N-acetyltransferase 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">NAT10_1</name>
        <name evidence="9" type="ORF">MHBO_004312</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003725">
        <property type="protein sequence ID" value="MES1922788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007807">
        <property type="entry name" value="TcmA/NAT10_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032672">
        <property type="entry name" value="TmcA/NAT10/Kre33"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10925">
        <property type="entry name" value="N-ACETYLTRANSFERASE 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10925:SF5">
        <property type="entry name" value="RNA CYTIDINE ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13718">
        <property type="entry name" value="GNAT_acetyltr_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05127">
        <property type="entry name" value="NAT10_TcmA_helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TcmA/NAT10 helicase" evidence="7">
        <location>
            <begin position="3"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="N-acetyltransferase" evidence="8">
        <location>
            <begin position="71"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13697" checksum="70617A50A15E456C" modified="2025-10-08" version="1">MPLKEITLEEPIRYSSGDGVEKWLNSLLCLDNPNYSNLTSSVPHPSKCELCLIDRDKLFSGHPAAEVFLAKIMALYSSAHYRNSPNDLQLISDVPTHRLFALINKNYDKNGFCKINKFFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT47</accession>
    <name>A0ABV2AT47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004371</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003865">
        <property type="protein sequence ID" value="MES1922843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17916" checksum="3FDAAB9D252CF84D" modified="2025-10-08" version="1">MFENESTCSDLKKIFLELGYEYFVFEQRKCLNLGSKNAADPEIIKSEIEGAINNMKGVHHIHVYFAESTFCDDQLVTRCKEFSKECERGNIKVYMDTAKICLVGRNEEELKNLRRTLMKKNFINREQEHDLPSSKGLRKIFFETILLWLMVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD0</accession>
    <name>A0ABV2ATD0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">POLR2B</name>
        <name evidence="9" type="ORF">MHBO_004214</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003439">
        <property type="protein sequence ID" value="MES1922691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.270.10">
        <property type="entry name" value="DNA-directed RNA polymerase, subunit 2, domain 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007120">
        <property type="entry name" value="DNA-dir_RNAP_su2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037033">
        <property type="entry name" value="DNA-dir_RNAP_su2_hyb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007647">
        <property type="entry name" value="RNA_pol_Rpb2_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014724">
        <property type="entry name" value="RNA_pol_RPB2_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04567">
        <property type="entry name" value="RNA_pol_Rpb2_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00562">
        <property type="entry name" value="RNA_pol_Rpb2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase Rpb2" evidence="8">
        <location>
            <begin position="12"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="DNA-directed RNA polymerase subunit 2 hybrid-binding" evidence="7">
        <location>
            <begin position="65"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="283" mass="32315" checksum="1CE7C01A9DF6C007" modified="2025-10-08" version="1" fragment="single">DIYEVSQENESWENFLNNGLIEYIDNEEEETIMCAMNILDLNDTDRQNIYTHCEIHPAMMLGICGSIIPFPDHNQSPRNTYQSAMGKQAMGVYATNYLNRFDTQSHVMFYPQKPLVCTKSMEYLKFRELPAGQNVIVAIACYSGYNQEDSIIINSSSIDRGLFRSSFFRSYSEEESQKNIYKKERFEKPLPNTCEGLKHGTYDKIDFDGLISPGIRVSGNDIIIGKTTPITDTFSNTKTNERKKDKKCSSVPLRASESGVIDQVVLTTNEENKKFVKVRVRSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK3</accession>
    <name>A0ABV2ATK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004528</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004282">
        <property type="protein sequence ID" value="MES1922996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7021" checksum="7C5B0FB407AE419B" modified="2025-10-08" version="1" fragment="single">AVKDEYIPVPPAPTVRGEVVSENFFNGVEETSNTEDVENAELKNKDAELGDNPTIGQIAQKEFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK9</accession>
    <name>A0ABV2ATK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">WD repeat protein Lub1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lub1</name>
        <name evidence="5" type="ORF">MHBO_004507</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004212">
        <property type="protein sequence ID" value="MES1922977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015155">
        <property type="entry name" value="PFU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19849">
        <property type="entry name" value="PHOSPHOLIPASE A-2-ACTIVATING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19849:SF0">
        <property type="entry name" value="PHOSPHOLIPASE A-2-ACTIVATING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09070">
        <property type="entry name" value="PFU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51394">
        <property type="entry name" value="PFU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="PFU" evidence="4">
        <location>
            <begin position="137"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="21264" checksum="75F015E3EF340D48" modified="2025-10-08" version="1" fragment="single">MNILAHPSVGEKPSFVYSITMLPETNELVSVGEDGNCCIWNDEQIAQTIKLPSYSREVISLANGDIVVTNGRNAFVFSRNPERSAKSLEIAQFEALFEQKQTGEQIKHSDSRTILRPGNKNGQIAVVKRSGNSVVYRWEESIGGWELVGSANGVAGENQKKRKHVVDGREYDHIVNIDFDGKDQAVLGFNVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM2</accession>
    <name>A0ABV2ATM2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004544</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004360">
        <property type="protein sequence ID" value="MES1923010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="25739" checksum="33F179FCB1CB1DA3" modified="2025-10-08" version="1" fragment="single">MLPFIDVKDLEPQELILWITPTKTLHMGRVTSVDTKNALIEVHYQGTPDPTKLEDQLFLPGWHPQTYQPTRELSSIQHQTFRPRNYSAELCTVAASEVLATGLRLNGCNQLAPNSLHRVLKAIASHTPATVRTISNFARGRTEPPHSQGQLSPLGIQFWGGCSLSEYVEDHILHEEPQEENFNEVTIRGATFKAVGRNNINKKYFAEYGIKSKELQIKGSNQLPATKNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS3</accession>
    <name>A0ABV2ATS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004594</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004504">
        <property type="protein sequence ID" value="MES1923060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="111"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="125"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="146"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="21602" checksum="90A5D69A3E26C4DB" modified="2025-10-08" version="1" fragment="single">MEKIGWKYFETQQAFSSDVYEPTTRAHNSITSPSDPLKYLLEQLELSSYFPDKLSLQTAQSKIDEHVKSETNNLGSVPWLILQKLLASDVDFREMVLYDFVQNKLDVLSESSSESSDTIHKTDSENSLNSKESCSSLNRDIENISFPKQTNPQWNSDLGQEESDVNLEFPEIPETKKKSSIEGYCSDATK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT5</accession>
    <name>A0ABV2ATT5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Insertion element IS150 protein InsJ-like helix-turn-helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004613</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004558">
        <property type="protein sequence ID" value="MES1923076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055247">
        <property type="entry name" value="InsJ-like_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13518">
        <property type="entry name" value="HTH_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Insertion element IS150 protein InsJ-like helix-turn-helix" evidence="1">
        <location>
            <begin position="12"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10896" checksum="3F1AA6AC567302D3" modified="2025-10-08" version="1" fragment="single">MNEESGRMSKAKEKFLKLYAKNMGTISLTCQQAGISRTTFYKWRNTTPSFAQQLEEIEDEQVDYAESKLKVNISNGDQRAIEYFLDRKGKKLGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT7</accession>
    <name>A0ABV2ATT7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">AFG3-like protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_004612</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004556">
        <property type="protein sequence ID" value="MES1923075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050928">
        <property type="entry name" value="ATP-dep_Zn_Metalloprotease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43655:SF2">
        <property type="entry name" value="AFG3 LIKE MATRIX AAA PEPTIDASE SUBUNIT 2, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43655">
        <property type="entry name" value="ATP-DEPENDENT PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AAA ATPase AAA+ lid" evidence="9">
        <location>
            <begin position="2"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M41" evidence="8">
        <location>
            <begin position="55"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF17862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1923075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="167" mass="17860" checksum="55C166FDA754498F" modified="2025-10-08" version="1" fragment="single">MAALTPGFSGADIANICNEAAIVAGRKKQNEVKMEDFLKASDRVIGGLEKGKSPISPDEKRHIAIHEAGHAVAGWFSKHCDPLLKVTIVPRTGGVMGFAQYLPKEVSLMRPEEVNDTIAMALGGRIAELIFFGHLSTGATNDLQKVTNLAYGSVRAFGFSEELGHIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU29</accession>
    <name>A0ABV2AU29_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003956">
        <property type="protein sequence ID" value="MES1922882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="Six-hairpin glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9634" checksum="F62C270BFB2413A0" modified="2025-10-08" version="1">MHNLRKIMERAWDEEKECFMASLKDEKNETERYLDASVLLLARLKFIDPNDEKFVKTVRVGNIFPKFFENLIRLENRSGVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU58</accession>
    <name>A0ABV2AU58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004736</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005051">
        <property type="protein sequence ID" value="MES1923191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002225">
        <property type="entry name" value="3Beta_OHSteriod_DH/Estase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01073">
        <property type="entry name" value="3Beta_HSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3-beta hydroxysteroid dehydrogenase/isomerase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="21052" checksum="492F56986E2B4E4D" modified="2025-10-08" version="1">MIALGSGKNLANFTFVDNVSYALVLAATELSYNSPLNNQAYFITNKKVVNFWEFVGKIYSGLGYSKPSIFVNETLILRISKFLAVLSARLKNYKPFLTEEKVLYTTKHHFYCDDKATRDFGYFPPVSMEEGIEKTLEAFQYLAKEETEPTILQRYNIKGRVIQLIVCYFVMRSLWKLIWKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU59</accession>
    <name>A0ABV2AU59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histone deacetylase</fullName>
            <ecNumber evidence="2">3.5.1.98</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RPD3</name>
        <name evidence="2" type="ORF">MHBO_004741</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.98" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010005062">
        <property type="protein sequence ID" value="MES1923196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0141221">
        <property type="term" value="F:histone deacetylase activity, hydrolytic mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="entry name" value="Histone deacetylase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003084">
        <property type="entry name" value="HDAC_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625:SF10">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01271">
        <property type="entry name" value="HISDACETLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="Arginase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Histone deacetylase" evidence="1">
        <location>
            <begin position="25"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="19077" checksum="1525B06136ECA5AD" modified="2025-10-08" version="1" fragment="single">MNINKRKISYFYDDRIGNYNYGDKHPMKLNRQRLTDHLIQKFQLYKKMRVFSEINLLTADEMVKFHDEEYIDFLQKIKPANEALFKAEKEKFFDQSFDPEDCPVFDRLFEFCQVYGGTSMRAAERLSLAEDDIVINWSGGAHHAKFNQAAGLKFNKTSTYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU86</accession>
    <name>A0ABV2AU86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004524</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004268">
        <property type="protein sequence ID" value="MES1922991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19514" checksum="4556ED70BA725D0F" modified="2025-10-08" version="1">MCTIRGSIGLNVLLWRPARKTDSNTLFHKLLHINICGLLRYLNRGMCSIKKILDETQFIVMGKFWTYIDRGLECDIRQTDPIYPENEDKSWQNDVLVKRTVNNYNTRWFLYSNKLFGKFHCEQFSVGDDVHGQYIPFLRKTSKTYKGGLGQITVQIKNLEHCSESGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG2</accession>
    <name>A0ABV2AUG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Chaperone protein DnaK</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004853</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005534">
        <property type="protein sequence ID" value="MES1923301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="84"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="90"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="104"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="131" mass="15090" checksum="3A63C42DD4224C54" modified="2025-10-08" version="1">MQEQAEKFKERDLKVREMSDLRNEADSQTYAAEKSLKEYKSKLPENLVKDIEEKVRAVRLVTSMGEPKAEDLKKALSELKETVMKIGGAMSNQQNEQTSQKQENTNDKAKDDKAKDDKSKETEAEYEETKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH8</accession>
    <name>A0ABV2AUH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Succinate dehydrogenase [ubiquinone] cytochrome b small subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_004581</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Mitochondrion inner membrane</location>
            <topology evidence="1 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the CybS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004471">
        <property type="protein sequence ID" value="MES1923048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1300.10">
        <property type="entry name" value="Fumarate reductase/succinate dehydrogenase, transmembrane subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007992">
        <property type="entry name" value="CybS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13337">
        <property type="entry name" value="SUCCINATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13337:SF2">
        <property type="entry name" value="SUCCINATE DEHYDROGENASE [UBIQUINONE] CYTOCHROME B SMALL SUBUNIT, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05328">
        <property type="entry name" value="CybS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="Fumarate reductase respiratory complex transmembrane subunits"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5 10" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU364031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1923048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="10272" checksum="8F83EDF9ACF6931A" modified="2025-10-08" version="1">MQSLSSATIALTVPGFFLLNNSHIGSLLETFFSAAVSVHIYLGVCGVVTDYVPNFLIKFGQVGALVLAIVVFLGLTKAILDGNGIVGNVRSLFRKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL8</accession>
    <name>A0ABV2AUL8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">E2 ubiquitin-protein ligase peroxin 4</fullName>
            <ecNumber evidence="6">2.3.2.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PEX4</name>
        <name evidence="6" type="ORF">MHBO_004919</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.23" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010005793">
        <property type="protein sequence ID" value="MES1923355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061631">
        <property type="term" value="F:ubiquitin conjugating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050113">
        <property type="entry name" value="Ub_conjugating_enzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24067">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="2 4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="5">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="3">
        <location>
            <position position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="10905" checksum="3C6FF057B447C462" modified="2025-10-08" version="1">MTAPKIFFVTKIFHPNVKFESGEVCLDILQASWSPVWSIESVCRAITLLLAHPEPNSPLNCDAGNLLRAEDLIGYKSIVRFYCEEFGLSKDCVLENN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX5</accession>
    <name>A0ABV2AUX5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PurM-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005032</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006294">
        <property type="protein sequence ID" value="MES1923458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="entry name" value="PurM-like C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004536">
        <property type="entry name" value="SPS/SelD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10256:SF0">
        <property type="entry name" value="INACTIVE SELENIDE, WATER DIKINASE-LIKE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10256">
        <property type="entry name" value="SELENIDE, WATER DIKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="PurM C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="108" mass="11469" checksum="B725736CC8E805A9" modified="2025-10-08" version="1" fragment="single">MVEKLAMSAIFKNNIVRCYKIASASMSRLNKKSGELLTKYGAKAATDVTGFGLLGHLQSLVEIQESEVGFAVETIPVIKDTAEIDGACNKMFRLLEGLSAETSGGIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ8</accession>
    <name>A0ABV2AUZ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005059</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006409">
        <property type="protein sequence ID" value="MES1923481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6594" checksum="19B3BDE5A6B06A1E" modified="2025-10-08" version="1">MCSRFRNSFYLLTWRRNVGNAYGSSKLRELSNSFGFYGTNRGFKNYAYYRSRSGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV21</accession>
    <name>A0ABV2AV21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">COBW domain-containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CBWD1</name>
        <name evidence="2" type="ORF">MHBO_005062</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006421">
        <property type="protein sequence ID" value="MES1923484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12277">
        <property type="entry name" value="ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12277:SF81">
        <property type="entry name" value="PROTEIN ABHD13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18937" checksum="1DAF32C55A81DDF8" modified="2025-10-08" version="1">MFVQLAFISIIILSRYRSFKEMIKGIPKVLSLCALCFTIISVLIVYNQENLLYRGSFATVASDENPEGYQNPEERGLEYEDIKFEGHDGTKLHSWLIFGPNSNKSRSYPTIMFFQGNAGNIGLRLDIIQKMVTETKFNVYILSYRGYGHSDGVPNEIDITKDSQVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV23</accession>
    <name>A0ABV2AV23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005471">
        <property type="protein sequence ID" value="MES1923291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12355" checksum="E1CC7E2A4F0E3417" modified="2025-10-08" version="1" fragment="single">MLYRYYLEILYQDRLIKFYQSMQKADSKTTCSLSDPNSETFHYKCDHEHTTGCDDCTLVVRTLLEVTKEFECCSFNKNIPKDIAKETYFEINQSKMNLSAWKSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV49</accession>
    <name>A0ABV2AV49_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005118</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006674">
        <property type="protein sequence ID" value="MES1923532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF045960">
        <property type="entry name" value="MHO_1580_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14002" checksum="2CD7FEAC3F8BEEED" modified="2025-10-08" version="1" fragment="single">KEYAELFYKPSERDRKSAVTELADIYIRPAITADVKKGYIPNLRSKVKTTGVASGLETYVDKTIAKPDLDIQDKSVHTIAKFLGTVKIDDSTYYDYEKHKTVKGYSSDAQVGEFIPYNFKGSYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC2</accession>
    <name>A0ABV2AVC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005212</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007172">
        <property type="protein sequence ID" value="MES1923608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6048" checksum="82F8F4283FC7F7B3" modified="2025-10-08" version="1">MKIDWAVDSNGNPVELTGVDFVKVYTGQNQQCGWLGETSTEVLGITDLHVLDKQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG0</accession>
    <name>A0ABV2AVG0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">MCM AAA-lid domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005198</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MCM family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007089">
        <property type="protein sequence ID" value="MES1923597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041562">
        <property type="entry name" value="MCM_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF66">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17855">
        <property type="entry name" value="MCM_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM AAA-lid" evidence="3">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15096" checksum="288F763EECE32905" modified="2025-10-08" version="1" fragment="single">ASNKLIEGYLKMRRIGRFRNKKVIAATPRQLESLIRISEALARMRFSREVLEEDVDEAFRLMKVATQSAATDPRTGIINMDLLSVDQNAMERKEAQAKVDLLLDIMDEESGGRPFSFLMAKFNEKADKVENF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVH5</accession>
    <name>A0ABV2AVH5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNL-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004958</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005966">
        <property type="protein sequence ID" value="MES1923392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024158">
        <property type="entry name" value="Mt_import_TIM15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007853">
        <property type="entry name" value="Znf_DNL-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20922">
        <property type="entry name" value="DNL-TYPE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20922:SF13">
        <property type="entry name" value="DNL-TYPE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05180">
        <property type="entry name" value="zf-DNL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51501">
        <property type="entry name" value="ZF_DNL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DNL-type" evidence="5">
        <location>
            <begin position="60"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="17104" checksum="E38DBE2837523563" modified="2025-10-08" version="1">MRPLSVLRKCGKTFINRRTFENLHRPRFIRHYTENRTSETSKLVAAIKDPKKSLISQSKHNPSKYQIMFSCGECRRHMTKSFSKQAYENGYVMIKCDGCDGMHLIADNLKWFSERTWRIDQVIKKEREDLEKTFRVIDERDLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC0</accession>
    <name>A0ABV2AEC0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">OBG-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000086</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01897">
        <property type="entry name" value="NOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030389">
        <property type="entry name" value="G_FEOB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041623">
        <property type="entry name" value="NOG1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010674">
        <property type="entry name" value="NOG1_Rossman_fold_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012973">
        <property type="entry name" value="NOG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45759">
        <property type="entry name" value="NUCLEOLAR GTP-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02421">
        <property type="entry name" value="FeoB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06858">
        <property type="entry name" value="NOG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17835">
        <property type="entry name" value="NOG1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08155">
        <property type="entry name" value="NOGCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="OBG-type G" evidence="7">
        <location>
            <begin position="169"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="389"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="457" mass="51758" checksum="A444FE77667F07A0" modified="2025-10-08" version="1">MVQYNFKEICIIPTASEFIDIVLSKTQRKTPTVVHRRYRISSIRQFYMRKVKFCAATIKERLGGLLSSFPRVDSIHPFYADLMHVLYDKDHYKLALGQLNATRNVVEKICKDYIKLLKFSDSLYRSKQLKRAAMGRMCTALKKLDISLKYLEEVRQHLSRLPSIDPAARTLILAGYPNVGKSSFVNKVSRADVEVQPYAFTTKSLFVGHFFHEYLRWQVIDTPGVLDHPPQELSGCNTIEMQAVTAIAHIQASVLFFVDLSPSCEYSVEQQLRLFEFLRPVFVAKPVVFVASKSDLRTFRDLPPREKGLIEQTLAAHKIPLVELSNLSEDGVIAARDKACALLLEARLARKLDSGRGAAVKARLAITRPSPRDHKARPPSIPVSVAAEKLQPRPKKPTVHEMQERNGGGGVFSVSLREHWDLRDPAWATHSVPEIFEGQNVSDWMDPDIEAKLDVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER3</accession>
    <name>A0ABV2AER3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000189</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000024">
        <property type="protein sequence ID" value="MES1918178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="344"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="501" mass="58659" checksum="4BE615F0CA0FD376" modified="2025-10-08" version="1">MGNHSSVIENTINYHYTQNDLYKALSISENELFEDFENLPTLLEKFYNEGVINTSKTIKTYEKNISISNKIKSILLVFSSFHIKNSNSSFNGKIDSEKVEFCSNETLDEFSRKYIWQTRKQLSANAKSIDPYNFWLNSKLQILERSVLAYFVARKKFKKEKSEKEILKEKTDFVDQIFDVKSEDFDKKFYRSVIKMASDLPEINGKIGLIAPKKSEEDLNEQNLQDSLRTGLSLNRPQTRRLVEELERTNTQNTSLTQQFLALQRAVQHQRNNINNDTSANAANNSNNEGTTLHRNSIEAMISRMSRLVRLNDNELVRFFRNDIPIQIRTNSNFFEKDVRFECLEMLKMTLKQVEKDNDEILKNIARFETIGKTKPATKLLRYLQKDFLRKISSATDSDKNILIKYFPIYCKTILNMSTKVLDTEVLYFQRHQSQKRLRSYKRRPLQTILDKSIVKMILPLLLLAIFVSLKSKLFYEMAGLIKSLKKFSDNKILKNRRIGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEU5</accession>
    <name>A0ABV2AEU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000211</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="12279" checksum="200F1AED8ACB3DD9" modified="2025-10-08" version="1">MLILSFEPKKSGRELNINNYKGQKLKKLDYCFRNDTVYELEGYLKILIDFCTQLSYQRNLEVLKVKIKNAMELTNHIYRNQMKIHFTYTLQFLQKNVYKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEW2</accession>
    <name>A0ABV2AEW2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Acetyl-CoA hydrolase/transferase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000242</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000032">
        <property type="protein sequence ID" value="MES1918244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1080.20">
        <property type="entry name" value="Acetyl-CoA hydrolase/transferase C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026888">
        <property type="entry name" value="AcetylCoA_hyd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038460">
        <property type="entry name" value="AcetylCoA_hyd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046433">
        <property type="entry name" value="ActCoA_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21432:SF20">
        <property type="entry name" value="ACETYL-COA HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21432">
        <property type="entry name" value="ACETYL-COA HYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13336">
        <property type="entry name" value="AcetylCoA_hyd_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acetyl-CoA hydrolase/transferase C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="15544" checksum="6242AC103C4493BB" modified="2025-10-08" version="1">MLSCEYTNMVSNIKRLDKMCAINSALEIDVTGQVVAESLGTKMLSGVGGQVDFMKGAALSNGGKPIIALPSTSSKGHSRIVPEIMPGAAVTTTRAHVQYVVTEYGHVDLKGKSLRERARLLVSIAHPDYREKLCHQALARFGKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF93</accession>
    <name>A0ABV2AF93_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Tetratricopeptide SHNi-TPR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="204"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="220"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="253" mass="29030" checksum="1ACD3AF8DC1C2010" modified="2025-10-08" version="1">MASEMLSEKSDRKSDDLSDLYSKTEMAKLEQIIANFSDRIESIKESNNERAILLLQYGEATLEMYRRKSKIFGLDILNSESSKSDEQKKTMLEKFKDAEDEIETCLLSLEESKIVLDKSSDKIEERIKLHSLLADAYLETDDIDLFGKEMNIAIDLSKDCGKTKSFEVIKLCEKMAEAYTLFKKPELAIDSLRKAENIIQISPQSDESAKTKKRILSKIDSIRKNDKENKPLKRKKSTSGEEKINRPTVKKIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF1</accession>
    <name>A0ABV2AFF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000359</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000052">
        <property type="protein sequence ID" value="MES1918388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033469">
        <property type="entry name" value="CYTH-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55154">
        <property type="entry name" value="CYTH-like phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="333" mass="39183" checksum="66712870B5139219" modified="2025-10-08" version="1">MLLNFKNPHSGNVLKHLEKLVHIWKSDDKYELEVKHYYLKSGEKNDFRFVNGTTKKNAEYLKNAFNNAKNELNVLKQIVSSDKFFTETTRKNAKSSIRKSTNEITKEETIIRKTRIEDLDANFWLDGNHLSNLRFSLSKEELLPKLPENLRESVYTRKKKREILEIEEILSLELTEIVANESKFEFEIELIKSQKSLKTSSTFLAQMMIAKIVETFSRQPMIRATLSLTKDNLFKMETVNLVIRKSYRGDNYNLYCSSEQNSEKLLKVTEGGIELCESLEEKIKLYPSNKKICGKFYYNLIEGKWKIMHLLSERSRITDLSELFEIMERRVAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ7</accession>
    <name>A0ABV2AFJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000064">
        <property type="protein sequence ID" value="MES1918453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="7788" checksum="A5F28E8E694987F8" modified="2025-10-08" version="1">MATFCWSTALWVACEPSLWNENSENTTLSPFCNFARNLKIEDVFASFDDGAESFHPGNDRELHFVVDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG48</accession>
    <name>A0ABV2AG48_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000570</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000097">
        <property type="protein sequence ID" value="MES1918628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10799">
        <property type="entry name" value="SNF2/RAD54 HELICASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="47"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="265" mass="30358" checksum="5FEB657980C1E346" modified="2025-10-08" version="1" fragment="single">MSSAKALLRKNKSPKPKTPPKQPLKRQPKQIRGKLRSYQMEGLNWLINLYENGLCGILGDEMGLGKTLQTIAFVAHLKTLKAVGPVLVVCPLNVLTNWCNEFARWAPTLEVVRFHGPERELNRVLRDRLDIGTFDVLVTTFEMVRAAENVVVNRFHYQCVVVDEAHRVKNDSAQISESLRGVTGFFKILLTGTPLQNNLRELWSLLNFLYPEQFESAHSFDRGFNLIGNKVNEDTMWQSQKVLKLFMLRRFKVDVANLPPKLETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG60</accession>
    <name>A0ABV2AG60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">WD repeat-containing protein 33</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">WDR33</name>
        <name evidence="4" type="ORF">MHBO_000608</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000104">
        <property type="protein sequence ID" value="MES1918675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045245">
        <property type="entry name" value="Pfs2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22836:SF0">
        <property type="entry name" value="PRE-MRNA 3' END PROCESSING PROTEIN WDR33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22836">
        <property type="entry name" value="WD40 REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="147"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="189"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="231"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="273"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="315"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="360"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="470" mass="53913" checksum="D64EEAB23A272B32" modified="2025-10-08" version="1">MVHGADNSNLNQMLANDLIRKERQIYDGKRIRKPVIRKAVDFYATTIKNLETRLYKKRMYEREALFPLPDYARDMLPSSEFLDNLGNAFCTKYISTSVNKTRCPVNAVCVLIEYLQWTPEGRRLITGTHTGEFTLWNGLLFNFETILQAHDDPIRCMVWSHNEEWMVTGDDMGILKYWQGNMNNVKAFRAHEGHSVRKTAFSPSDKKFATASDDGFVKLWDFERSLCERRLEGHGWDVKALDWHPSQALLASGGKDQRLRIWDPRTGTAVATRTAHKHTITCLQFNQNGNWLLTGSRDQLLRLWDIRKLKELAVFRGHSKEVTCLQWHPLHESLFTSGGFGGTVLHWIVGEPDEPAVQIIGAHDNSVWDVAWHPLGNVLCTGSSDHTTRFWGRNRPGDKMEDRYNAYLLPEEKRGKAFTDLEGAALLNPNKFGQRLSAISDQWREMQESVKNPLREESEVIPLLGGGENF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG96</accession>
    <name>A0ABV2AG96_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000618</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000107">
        <property type="protein sequence ID" value="MES1918691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051218">
        <property type="entry name" value="Sec_MonoDiacylglyc_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45856">
        <property type="entry name" value="ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45856:SF24">
        <property type="entry name" value="FUNGAL LIPASE-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fungal lipase-type" evidence="1">
        <location>
            <begin position="2"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="16848" checksum="099CD36A6F51E148" modified="2025-10-08" version="1" fragment="single">IDFYVTGHSLGGALAQIFALDLILRKEHESKVYTFGSPKVGNAFFSKLYDEVLPSTFRLVFKKDAISNLPMMSGYVHSGVTVQLDHAGNIIIDPSLAEKFIVGSTTSLDNHFLGNYINALFEAEKFYSELYQREKMGVKSSSSLFKENSHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ2</accession>
    <name>A0ABV2AGJ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Importin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000703</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000128">
        <property type="protein sequence ID" value="MES1918799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013713">
        <property type="entry name" value="XPO2_central"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10997:SF8">
        <property type="entry name" value="EXPORTIN-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10997">
        <property type="entry name" value="IMPORTIN-7, 8, 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08506">
        <property type="entry name" value="Cse1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03810">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00913">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50166">
        <property type="entry name" value="IMPORTIN_B_NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="7">
        <location>
            <begin position="27"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="494" mass="57030" checksum="9C240BF44CAC7334" modified="2025-10-08" version="1" fragment="single">MNGNSAKTVESCFVQSFSPDLNIRKQAETALKSFEKPGFTIMLLEITGNQSNATSQAAVIYLKNYIQKNWHLNENDSVVKSEERKQIKQIILKMMLKSTNIVSNFLKAIIQIICKTDFPDNWQNLMPELIQNLSTNDIAIVKGSLEVMDSIFERYQNTERSLKLDKELLYLSKILVNPLTDFFNKTMSLLSSGNSDQFFSVMSPMLGAFKKLITLELLESIESKSHIWLGGIHKLLKHQNEQDVSLWPDLSIQVKKEILQIVDLFCEKYDDCVSYSKAEKEFLNLTFQILSKIPTEKRYDDLVIEGIKYVTQVLAKPNTKNIINLSQIFKVLLENVVFPNIFLRNEDIEEFKYNPMEYYRKDLENSINLTRRKAAFDLIQVLNNLSESEITKTITNYVSQLNKEYVENPSQNWLKKDAALFLIISISVKSRTERYGVMRVTDNFDVKTFLANNVFPELTGSSSNNILRADCLKILIYFRSHIENSNFDNVSKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN6</accession>
    <name>A0ABV2AGN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000724</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000133">
        <property type="protein sequence ID" value="MES1918823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="291"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="377"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="526" mass="61072" checksum="913EF5FBF766ED59" modified="2025-10-08" version="1">MASNNLGLYFKKKIDLLVNKKKNKIRISYETSVSDKSQRIAIKATLKNSPLKADGFFQWFHKSEDSNRLKLILNSFSDSHVISVDDFMQKFYRDHLSVSILIRYNFNDKSEHSEFCAVPIGDFGAKYYSDLTDKAKNALKSLIDNGHIDFHVFDKSDNLFSLRVEREQMRLNQLVLNESSAHNQNFGFGRPIHIIVPTGNSKTFQLFDLAGEKTIAQFKAKSHLERDLITLLLRKKFNNDQKYFDFCSDPHKQLENKSFVFNKTNSADYFANLREIKDKSSLHLDLFAAEIDFLEHLKRECSRNANKLAAENKVLLKRKNDIQNEINKSSVDDSIKDKASLQHGIKLFDEESAKIISQIRKTNESSVKSNKLEQRLAENSKSAKKDLKLRVLELEKQRSQLAKMAAKETTTKKLLRTQEENKNSSEAILKTEKEAMKRFRQIANQSFRIERENAEAKQRIKNLISESNLYKEQKRRLEFEKSRETVQEIFDSITTKSDNNHVSNGDKLDIANFDDYVDNFFLQKGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP7</accession>
    <name>A0ABV2AGP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000756</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000142">
        <property type="protein sequence ID" value="MES1918860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23474" checksum="0A629F42FD2F81FF" modified="2025-10-08" version="1">MNCSKIPAPFYITGGKSQIPAPVYQIDNSINDNRNINNINNDLRKISITTNSTTETDPTTQNNQITSTINPSKKLKISSIDSKSVLDDKKTNDLDKNEFEKSKIEKNLTQLQNNEKQQISFKDDRNEQQIANLDKSDQIEDLDLRAPEKTLDIDIKNNEDIKSAPENIESLAKIGLKVKNSVKTLPKIVHQRIDEEDNRKKNKKQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHB3</accession>
    <name>A0ABV2AHB3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CFA20 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000922</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000186">
        <property type="protein sequence ID" value="MES1919048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040441">
        <property type="entry name" value="CFA20/CFAP20DC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007714">
        <property type="entry name" value="CFA20_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12458">
        <property type="entry name" value="ORF PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05018">
        <property type="entry name" value="CFA20_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CFA20" evidence="1">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11493" checksum="0AC827A3BFFB3C7B" modified="2025-10-08" version="1">MFKNTFQSGFLSVFYSLSDSPLQLWRVEKELDENTEMIEEIALKSTVLKIEGQNPHKNFISLPSDNSRTLGIKLPILVLILKNVIFSFSDRPFLLFRSGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH7</accession>
    <name>A0ABV2AHH7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Mediator complex subunit 14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000634</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000111">
        <property type="protein sequence ID" value="MES1918712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013947">
        <property type="entry name" value="Mediator_Med14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12809">
        <property type="entry name" value="MEDIATOR COMPLEX SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12809:SF2">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1209" mass="143361" checksum="84D1EF5052F7764F" modified="2025-10-08" version="1">MSDSKLPLIWKHVGGDLILVKKAVKSFFASIYLELIELLENLDNETVFEMNKKLSHFIDSLHFRILKLYCFLKWTRLNFSEKENLISKTIVFEKNAKITTDSILNLSQNLATIKVVKMWDIITASNVLYRRTYPYLDINSVTKNFTEKPLFEKKNFDQTKNFLNNKICDLLSKKDFAKKLNIKLLKIDKGMGYFQMPFFPKIKLSISMNAKRENFKIFWILLNFKAENLLYLANKKKSDKQKFIESLNLNSFHQNLDDKTTKQNFDAIFEALIDLKNKIFLNHLKSEISFLKKYFCCEMEFDYSPGEFLVIYYWSKLPNFGKNLKIRKFEKKEKSLKFIKIEKFCNSLKFTFDENTKILESSDLDQKMTKFVQIFNNDKTTFKNSKNPIFLLEIVKTIFNANGNALLLTILKFLRDLKKSFKNIRTFENINNFLWEKAFLIPENDYKNKVIDNKFESTEHLIRKLNILEVETEILEIGIKKFVDCTEKMSLFVIANKNVWLNFTVNYRNGELIVKTNCVSDINKLNIYNKMLSEDYRNIFKIILSIKTDFYFSKFRFSLNQFIVRKSKIGECAKKCCKNEIFYRFSKLERNKMEIILNQNLKFCVHWFDEQIYKIDLIISNKSQFDVTLDWTAKFYKMSQSLKIDDFDKIWSKFGPNLFLDWKKVIFENIIISEFAKFGINYKSDKTSKTTKFSNFCSSNKFFDLLKLDKIDVDDKISFFFKIGSNSILDKIGKNWILSDESHLQKIEYIGPIKSTILEKWIKMKLKFIQISKFVKNVKIITKENVFKWEICFSKFNKIELKSEDVLINVVFTMKGLKFSENNFSAKVRINAKICQNYSKFKEKLIKKMENFFDFKSIENYENVKTFFSVVEILPKLDGLDKFLFWSKKLDFKNGIEKSLKYQFDHFCCFTISFRNQKNKLRIKITNKNLMIESADFKQNFVKINQIDDFLRKWHFRCGFDFLKKIYFDSKYLENKKTILGQNIHHNGALLALKKYFVIKVTPENCSLQQKELLVLSSYLEKIVCAPPFSENCLKFFIKLIHSPFHVLSSLLPVISFELTSLENNEILKCSIKPEKGENFEEKNMKLFLQIFLKLSDNYTRIPLFFDMLNGQICFWALNRIDIGNKEKKTPIFYPKELLKRINNRILNTKLTEKLITAIKYILSQSTKEIEDAVKSLNSKFVIEKSVIVPKIDQLFSVLKSSELELQNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK4</accession>
    <name>A0ABV2AHK4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">RPN1</name>
        <name evidence="11" type="ORF">MHBO_000838</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Component of the oligosaccharyltransferase (OST) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Endoplasmic reticulum membrane</location>
            <topology evidence="2 10">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the OST1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000164">
        <property type="protein sequence ID" value="MES1918954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007676">
        <property type="entry name" value="Ribophorin_I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21049:SF0">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21049">
        <property type="entry name" value="RIBOPHORIN I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04597">
        <property type="entry name" value="Ribophorin_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0647">Proteasome</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0732">Signal</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045001966" description="Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" evidence="10">
        <location>
            <begin position="25"/>
            <end position="558"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="450"/>
            <end position="470"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="558" mass="64125" checksum="05EFEEF39E02825B" modified="2025-10-08" version="1">MSLFNLKNAIVIFVIFAQTVKTETKAITIINENVERKIFINDNIIIETLKIRAKNTKNEAVSKYKLSLYKEFLDDNKIAFVEAKRADERLKIDKKFKNSRDPHVDVHIEIPANSTIEITANLHYVHLLKPHPEALPIHSEPSVMIELPAHFVTSYRTLFQTTVLETTKALLPKIYKADAPQPFSVHRRGARIVCGPYRDIYRDIENSQNEPGESIRLRAQTRSKLLAARKVKRSMKIGLWGKTLVSEKMTLHSEGNRLEGDYSPIFEDRDGRAVEEITAFLPKNAKNIKTRDVLGFLYEIRVEELGENVKLTIPLRFPLIGGWKTALEISYQLPTSGICEFDAAGKVYRLKMESVSIIRNLMADEYTLEILFPEGSSDFRIRKNFFEKFLRNGVKMERVEGFKVVGKMTSGKIFNKMAVKFNAENFVSSKSEQILMEYKLAAIYLFLKPLLFAVYIFLGIFCCYSISNILRRSKIVKKRKTAIEGFDGSKDKIKEDFAKFKKGLDKMSRNEIIQKCDHFGSLLNNVFEDKKRAGMLLNLKGLRKRFAVVKALQKINID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU9</accession>
    <name>A0ABV2AHU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001045</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000219">
        <property type="protein sequence ID" value="MES1919182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18898:SF2">
        <property type="entry name" value="NUCLEOPROTEIN TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18898">
        <property type="entry name" value="NUCLEOPROTEIN TPR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="485"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="276"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="527"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="10"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="598"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="598" mass="69474" checksum="8AFDFD2D382E5937" modified="2025-10-08" version="1" fragment="single">MITRSTSQKTKSEKSPKKLTENESAPTKDSKDKLQRLEIEKIDLLEKSQNLKTRLDELASENQRLKRAESDFENYKTLNEKQKSEHPTLLQKIVKLEKSNADLKESLRKSTESTQRLEKLTEKTKTANEKFEAEMDQKNKEIFALKQRIIDGKEEITNLKNESDSSFDKIKFLETTIADAEKRLEKTLNDLEAKETELTTQNSLLLSKTNTTSVELNRTKIELEEALQRNSSLALRNEELKKEAAAASADHKSKLTQKTRSLEQTTISLGMKNQQIELYKESARAYEEHIEALRGETVSKEHEIAKIAERLAEKENAFNELQKKIASSEFSQNGAKREFSFSQTIGEIASVLNPGYSPRKILRVEASPNLSPNELYIKFVRVYDSYKAAFKEKLALEDGLKRFSRYVESKSPNLRRQQVKYEMLRKSYGNMSNRLAAEKRKGFSREVELKAVRSELEKALAKKTAYKKSTRILKQQVQLLVAEQVPEEQNTNGQENAKDLESPKNKKISEHVFVDFRELHGKYLKLLKKHNERAQREKFERADLEKENGRLVEEFARARGSWEESERRHRRDMKELVEKISTSKKLFRRDSERFVVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV4</accession>
    <name>A0ABV2AHV4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">40S ribosomal protein S12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPS12</name>
        <name evidence="6" type="ORF">MHBO_001104</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000237">
        <property type="protein sequence ID" value="MES1919245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="Ribosomal_eL30-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004038">
        <property type="entry name" value="Ribosomal_eL8/eL30/eS12/Gad45"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000530">
        <property type="entry name" value="Ribosomal_eS12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11843">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01248">
        <property type="entry name" value="Ribosomal_L7Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00972">
        <property type="entry name" value="RIBSOMALS12E"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="L30e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal protein eL8/eL30/eS12/Gadd45" evidence="5">
        <location>
            <begin position="19"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="14916" checksum="71D08E42D21FB2F5" modified="2025-10-08" version="1">MAEESEKVAASQQSTINEAVEKAILIALQYGDVSRGLKESIKALESEDGLVLILAKDNDEPLYVQTLTALANEKDVPILKVDSKMELGRASRFCKYDIEGKPRKIVKCSSVVIKSWGRESNAREMIMQEIEKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV9</accession>
    <name>A0ABV2AHV9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein S14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001121</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="101" mass="11677" checksum="FF30B997FF401FEE" modified="2025-10-08" version="1">MSKLANLRQTLRNLKIDAFIIPTKDAHNVQIVISVERIHCEQRQAPRVHFRVQRVRGDCCRDHGARFAVGRPPLLVGRRTPNRQKILGNRQNGPEKRAFAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX3</accession>
    <name>A0ABV2AHX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001129</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000243">
        <property type="protein sequence ID" value="MES1919270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045453762" evidence="2">
        <location>
            <begin position="31"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11254" checksum="A2A6C3A8914A0B34" modified="2025-10-08" version="1">MESRNTYADAFLVNAVLLLALSLPVSHLLARVSATQLGDCYVTRFYRDMEASTPFKQFFAANVFYYAVFAASAITAILYFVFPLKQNDKLEKRLEKIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI00</accession>
    <name>A0ABV2AI00_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="3">PPIase</shortName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CYP1</name>
        <name evidence="5" type="ORF">MHBO_001166</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000253">
        <property type="protein sequence ID" value="MES1919311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024936">
        <property type="entry name" value="Cyclophilin-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020892">
        <property type="entry name" value="Cyclophilin-type_PPIase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071:SF561">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001467">
        <property type="entry name" value="Peptidylpro_ismrse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00170">
        <property type="entry name" value="CSA_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="12909" checksum="48F93210D2CD0AB6" modified="2025-10-08" version="1">MGFGYKGSAFHRVIPNFMLQAGDFTNGDGTGGKSIYGNKFEDENFALKHTEPGLLSMANAGPNTNGSQFFITTTKTSWLDGKHVVFGKVENGMDLVKKIESLGSQSGKLSASVVIENSGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI69</accession>
    <name>A0ABV2AI69_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sm protein G</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001225</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the snRNP Sm proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000274">
        <property type="protein sequence ID" value="MES1919383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044641">
        <property type="entry name" value="Lsm7/SmG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10553">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10553:SF2">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <feature type="domain" description="Sm" evidence="4">
        <location>
            <begin position="4"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00041356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="8671" checksum="68DCB05154C3822D" modified="2025-10-08" version="1">MGKSAGPELKHYMDKILDLKLRGKIQIRGNMRGFDQFMNVVLSDAVHFVTNNDRRQLGTIAVRGNSILAIEVVDMIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI94</accession>
    <name>A0ABV2AI94_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ADF-H domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001182</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the actin-binding proteins ADF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000258">
        <property type="protein sequence ID" value="MES1919332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002108">
        <property type="entry name" value="ADF-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017904">
        <property type="entry name" value="ADF/Cofilin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11913">
        <property type="entry name" value="COFILIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00241">
        <property type="entry name" value="Cofilin_ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00006">
        <property type="entry name" value="COFILIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00102">
        <property type="entry name" value="ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55753">
        <property type="entry name" value="Actin depolymerizing proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51263">
        <property type="entry name" value="ADF_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADF-H" evidence="3">
        <location>
            <begin position="1"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15103" checksum="2CC101BC611396EE" modified="2025-10-08" version="1">MEDFKQLKKAKNQHFMILEIDSKKGQIYSKHMQNSTQEEPEDAFEIFAEYLLENFEKKPAYVVLDFDFEKSGGKKNKLILVSWVPDESPPMSKMVYATTATSAKNSLVGVHKLVQVNDEKSLSYKNFVSKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA4</accession>
    <name>A0ABV2AIA4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">diphthine methyl ester synthase</fullName>
            <ecNumber evidence="4">2.1.1.314</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">DPH5</name>
        <name evidence="10" type="ORF">MHBO_001234</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">S-adenosyl-L-methionine-dependent methyltransferase that catalyzes four methylations of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine methyl ester. The four successive methylation reactions represent the second step of diphthamide biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 4 S-adenosyl-L-methionine = diphthine methyl ester-[translation elongation factor 2] + 4 S-adenosyl-L-homocysteine + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:42652"/>
            <dbReference type="Rhea" id="RHEA-COMP:9749"/>
            <dbReference type="Rhea" id="RHEA-COMP:10173"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:73995"/>
            <dbReference type="ChEBI" id="CHEBI:79005"/>
            <dbReference type="EC" id="2.1.1.314"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; peptidyl-diphthamide biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the diphthine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.314" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000276">
        <property type="protein sequence ID" value="MES1919395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0141133">
        <property type="term" value="F:diphthine methyl ester synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11647">
        <property type="entry name" value="DHP5_DphB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="entry name" value="Cobalt-precorrin-4 Transmethylase, Domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="entry name" value="Methyltransferase, Cobalt-precorrin-4 Transmethylase, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004551">
        <property type="entry name" value="Dphthn_synthase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00522">
        <property type="entry name" value="dph5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10882:SF0">
        <property type="entry name" value="DIPHTHINE METHYL ESTER SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10882">
        <property type="entry name" value="DIPHTHINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036432">
        <property type="entry name" value="Diphthine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="Tetrapyrrole methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Tetrapyrrole methylase" evidence="9">
        <location>
            <begin position="1"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="266" mass="29800" checksum="D8F4FD44E2574A82" modified="2025-10-08" version="1">MLYLIGLGLGDVKDITVRGLEAIKKCQFLYLDYYTSIFLSSAEEMSSFFGKKVVLADRNMIESSSDRILGDAVNGNVAFLVVGDPLGATTHTDLILRAKKKNISVNVVHNASIMNAIGSCGLQLYKFGQTVSIPFFDKNWRPKSFLDKIKSNLRNGLHTLCLLDIRIKEQSFENLAIGNDIYDPPRFMKIKDCINQIMDISKEENSLFNDSTKAIGVARLGHDDQLIKSGTFEQLKNFDFGKELHSLVIAGELDQIESEFFDTIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ9</accession>
    <name>A0ABV2AIJ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UBA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000311">
        <property type="protein sequence ID" value="MES1919505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="208" mass="23967" checksum="F46E2C94A8B1D423" modified="2025-10-08" version="1">MTKSNIRQTLLGYGFNEKHIDEAMQKDPHDIKNCLKSIASLVKKELEQKENPNTINQKQKKDLEIAKNEKKQRFLPKNGRAKTLEENKKILKSVFEIELSKKWEKFVMVELHNLAFPSKEQKEEKINVLANFGVSLDKLNDESMSKNIGLSLFNKLTKICDITAIDPPNFSDFATKGSLIVDRIWNVPHLMLAIQNTISLNRVFCIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV9</accession>
    <name>A0ABV2AIV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001167</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000253">
        <property type="protein sequence ID" value="MES1919313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="71"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="133"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="25378" checksum="694C3FAC55677BA5" modified="2025-10-08" version="1">MIAKLFYEKFVEGDRSFDETKRNDNKIRKKFSKNKIELTSDEHKSISPAKKLDQNPDIVLKQKYEIKKTSKERNINYKTPKTKDIENQDRTDRHLKIAAKSNLPFSKKQIPKNKNKNSKNYNPQKNKFKINDHLNSGASTHENNYFSQKAEKSRKSDFFGIAQNKPKKAISWIRSKTRSRSWLKDTISKTNSYSYYDTDSREYSYSYYDSSEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ00</accession>
    <name>A0ABV2AJ00_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Protein transport protein bet1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">BET1</name>
        <name evidence="9" type="ORF">MHBO_001442</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000354">
        <property type="protein sequence ID" value="MES1919646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12791">
        <property type="entry name" value="GOLGI SNARE BET1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="89"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="8">
        <location>
            <begin position="18"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="12"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="12748" checksum="FA7390DC37F887EC" modified="2025-10-08" version="1">MSYKNNNNGDQTEGRTLKEMSKSDDKKIAPLLQKVAFLKNLTLSISEESTKQNDLLDRMERGFVERSSSLGQNLKQLIKLSGFNGQRHMHHLSMFIFFAICFLYFISKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ12</accession>
    <name>A0ABV2AJ12_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">WDHD1/CFT4 second beta-propeller domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001449</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000357">
        <property type="protein sequence ID" value="MES1919654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022100">
        <property type="entry name" value="WDHD1/CFT4_beta-prop_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19932">
        <property type="entry name" value="WD REPEAT AND HMG-BOX DNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19932:SF10">
        <property type="entry name" value="WD REPEAT AND HMG-BOX DNA-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12341">
        <property type="entry name" value="Mcl1_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WDHD1/CFT4 second beta-propeller" evidence="1">
        <location>
            <begin position="1"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="295" mass="32813" checksum="CC297912160E3E23" modified="2025-10-08" version="1">MGDNFIAVGTSSNTVRLLRLSGLQFEALVMPGPIVSISVTDHLLAIVCHLSNPVNDKQILGLRVFNVEKMILEYDGYLPSGEKNCELRWIGFNDFQMVITLDANLKVYCLSTAKGNQWIPMANIGKQLENKETFYPIGCYQDKLVGVTCPKKTYPLVTPKPLTTTLALKASIVNILVSDNPQFDQKIKEEIGEMAVDIATNKIFLNETNFLLNSASYNGDMNLEGKARELRAAIDKSAYSIFYYLNESQPLLGYDVATQINTPKAMQLCIDCAKENDSGKLAKKLETLYKSKFGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG1</accession>
    <name>A0ABV2AJG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001564</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000404">
        <property type="protein sequence ID" value="MES1919800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="182"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="253"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="202"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="275"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="324"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="356"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="417" mass="49845" checksum="6E4160354B500B51" modified="2025-10-08" version="1">MADARSDSESHIYTKPHRYESDDDEEYSRNGRRPKNRESFSRQQNYNRNKQNRSSRQRPYRKKDQFNDHFSANRRPKNYKDGRNTENDFRNDDFENGQFDQTELSKKNFFTGETKWRKERNWRSPSRDVRRSDRNAPNLSPQEIQSLVLDEHEKFNRAYNRLLKDHHDAVQKLLKIRNGQNSKNFADYSSPRSFRNNYDDYEEKKYPRESQRNFARNAETRYQEKISRGLRFPSKIDYDKDFKLNVNAREFVPSNKKDEQDQNYGQNKRNFNRRRNLDNRRRNDSKPKPSWADNELSNREASAEENNFENEYTWAPQEKKVEENVSSESEVNLNEITALDGLSSEGGNIDWDDDIKDDKNKNDDKNKKVDFDEDDQKVDGDNQKVGIGGDDQNDDKNKKVDFDEDDQKDDGDNKKDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM4</accession>
    <name>A0ABV2AJM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">3'-5'-exoribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">MTR3</name>
        <name evidence="11" type="ORF">MHBO_001617</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RNase PH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000426">
        <property type="protein sequence ID" value="MES1919864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="entry name" value="GHMP Kinase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015847">
        <property type="entry name" value="ExoRNase_PH_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036345">
        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050080">
        <property type="entry name" value="RNase_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953:SF2">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT MTR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03725">
        <property type="entry name" value="RNase_PH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="Ribonuclease PH domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0271">Exosome</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="9">
        <location>
            <begin position="29"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="10">
        <location>
            <begin position="141"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="24755" checksum="B750CBBAADF512C1" modified="2025-10-08" version="1">MDNSEGPKNDFVVQENETVPPQIANFYVEHLGSKILTKIKGPHHAKIPLNKDRGTLELSVKLTDFCTKGRHILKPETKETEEQKITNFVRKAIDPIIDYDSFPDTVLSIEITIIDLTENAIPATIFGLVLGLCRANIGITDIVGASTVLLIGEELIYALGNSSEALAKGRITICFAANMRKITHIELEGPMSQQKIGRAIEMAIKRCYETCSVLATRVKSDFTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJW0</accession>
    <name>A0ABV2AJW0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001349</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000320">
        <property type="protein sequence ID" value="MES1919537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="25031" checksum="24620F069396EA37" modified="2025-10-08" version="1">MILLIMFLRVLCATISIVVPPGRQCSLYQLGSSMRIARVYPSKENANAYVNVLSDGDMRLIECIGEHSMIKIPAMNGGHILRNYILAHCDDSILQSKYGEVSAAKMACATDNGSCGIDPLEKLDIKMEVGLLKKKFHQTYQMKVTCNSDESVQIIQCGKGKWWYWNGKDFSNEFTKKSCKLTLLKIIALASVGFVVIFYVLVIFVKMYKRRRKRRSKKSVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJW9</accession>
    <name>A0ABV2AJW9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001708</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000463">
        <property type="protein sequence ID" value="MES1919969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050620">
        <property type="entry name" value="Thioredoxin_H-type-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438:SF468">
        <property type="entry name" value="THIOREDOXIN-1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="38"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15162" checksum="E646BBB840899664" modified="2025-10-08" version="1">MYKKLNNSNIKKMHFPQTNFFAKRLFSVLSKEQNRIEKMFLDKKTFFLFFKASWCKNCKKVFPVLENFSQKKNISLILADIDDFPDLAFKKGVASVPTLMYIKNGKETFTYCGSLPVVLEQKLSKIIAND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJY6</accession>
    <name>A0ABV2AJY6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">26S proteasome non-ATPase regulatory subunit 7</fullName>
            <ecNumber evidence="3">2.7.12.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PSMD7</name>
        <name evidence="3" type="ORF">MHBO_001724</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.12.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000470">
        <property type="protein sequence ID" value="MES1919991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004712">
        <property type="term" value="F:protein serine/threonine/tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024969">
        <property type="entry name" value="EIF3F/CSN6-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13012">
        <property type="entry name" value="MitMem_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0647">Proteasome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EIF3F/CSN6-like C-terminal" evidence="2">
        <location>
            <begin position="40"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13845" checksum="1D15CEFC8EAEA570" modified="2025-10-08" version="1">MDARENASVDPKTYFVDTELEESEPRESLAPLETVMAATEPEEIGVEHLLRDVRDKTAPTLAKKVQSRDEAKSDFAGKLEAITDYLRQVETGEMPRNEKICALVRDLFNDAVNSEKDQSFVDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKJ1</accession>
    <name>A0ABV2AKJ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000462">
        <property type="protein sequence ID" value="MES1919964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16762" checksum="B769D19EAB486ED0" modified="2025-10-08" version="1">MLKNSILFKPFNRTKTLTKNLHKLKLSKIYPAQNPKLHPMVEIFTEFEKFCKKKQSEKLLSTAEDFVRNRTKEIPKHRETRLLIKNAHAFLNTFRLWSDYKVFSHHKRNRQSSTNGRNWAWTTTSSKESSPTRTASSFKIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS0</accession>
    <name>A0ABV2AKS0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001924</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000563">
        <property type="protein sequence ID" value="MES1920232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10691" checksum="1463F279A8AF02BC" modified="2025-10-08" version="1">MKLGGNPVCAELGDDFGWLYLPICFEKSKGSFQMKFWPVFLYAVMFSAIFVAGVFILFASSFVTDADILNIENEINEIGVGEFRDPSIRVDLLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW0</accession>
    <name>A0ABV2AKW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Small nuclear ribonucleoprotein Sm D1</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">snRNP core protein D1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">SMD1A</name>
        <name evidence="8" type="ORF">MHBO_001761</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the snRNP core protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000484">
        <property type="protein sequence ID" value="MES1920033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01724">
        <property type="entry name" value="Sm_D1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027141">
        <property type="entry name" value="LSm4/Sm_D1/D3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034102">
        <property type="entry name" value="Sm_D1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23338">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="3 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 8" id="KW-0687">Ribonucleoprotein</keyword>
    <feature type="domain" description="Sm" evidence="7">
        <location>
            <begin position="2"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="83"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="95"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12593" checksum="4B22AAA65262FF85" modified="2025-10-08" version="1">MKLVRFLMKLSNEKVTVELKNGEVCVGTIAGVDISMNMHLKNVQVSKGDGPKKDMKQLTIRGNNIRYVIMPDALNLDALLVDDTPKQNPSGTGKRFGKGVRGRGRRRGMNRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL47</accession>
    <name>A0ABV2AL47_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Large ribosomal subunit protein bL21m</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002030</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bL21 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000625">
        <property type="protein sequence ID" value="MES1920352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028909">
        <property type="entry name" value="bL21-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036164">
        <property type="entry name" value="bL21-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21349">
        <property type="entry name" value="50S RIBOSOMAL PROTEIN L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21349:SF0">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN BL21M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00829">
        <property type="entry name" value="Ribosomal_L21p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141091">
        <property type="entry name" value="L21p-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00044129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17198" checksum="DEC150E9EDDBC851" modified="2025-10-08" version="1">MAIHKLPETEKSDLGKSTASSKFAIFALHDASRLVNRQYFVSVGDRLMLERLFDDNKRLYDIGDRVTWENVLMVGSRNATVIGQPLVSNSKVLGVVEEQTELKPIMVFKKKRRKGYNRLKEFIPKTTIVRITDVEFDFESILEKSKQFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL59</accession>
    <name>A0ABV2AL59_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Arp2/3 complex 41 kDa subunit</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">p41-ARC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ARPC1A</name>
        <name evidence="11" type="ORF">MHBO_002044</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the WD repeat ARPC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000633">
        <property type="protein sequence ID" value="MES1920367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017383">
        <property type="entry name" value="ARPC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10709">
        <property type="entry name" value="ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10709:SF2">
        <property type="entry name" value="ACTIN-RELATED PROTEIN 2_3 COMPLEX SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="10">
        <location>
            <begin position="2"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00041244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00041789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6470" checksum="B0F8D78164FEF41E" modified="2025-10-08" version="1">MIKKHKSTVLSVSWHPNNVFLLTGGCDAICRIFSGYIEELDTMFHYQHFWLKGRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL79</accession>
    <name>A0ABV2AL79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein SDA1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001863</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000532">
        <property type="protein sequence ID" value="MES1920153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="493" mass="57590" checksum="2A1680D8C7395F64" modified="2025-10-08" version="1">MGILAKSAFKNKNSISNLAKTAELYLSYFFENYKFVRPERKTNFLYTIKRFAKLIEKEKVEKLILSTLAKIGGFSQNEITSNLDCFDLLTALLSQKNLTTSILDSVLSLFLSHLRYGESTKRKMFFCLKFVNLHKKYFREKSDLIFTAIYGHCSPKTFFRPKTDFLIDVMDNIDFENFEKTDLKQFFLLEIFANFCALKDKNAKSRNLARKFILKIAETLIDKKIKSFFGNDFSIFDFIKFSFENFGKSHQNAMIEGITIIFNEHHDRFSIEQISQILTKIEDLNNFDKSKDQNKNILFFLKSISSKLPKQKLIPILPKTLFILKSILPKSAKNKRAISQLILEKLSKKFGVETIRDHLEIGQKPLMRKVARKINKKKSSKKNINDDKSDRNEILDDYNDIERNENDLMKIDKNCEKMDLKQFCKIGKTIKSGKIGKTIKSGRIGRTIKSNKRIQKTKGKYGKNVGKRKMQSFAYFKLEHKNLKKIDKKKLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD8</accession>
    <name>A0ABV2ALD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000687">
        <property type="protein sequence ID" value="MES1920470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="5745" checksum="EDC34F1ED1E17F8A" modified="2025-10-08" version="1">MVHPMRMAVQDTSQSAVARIPDANGLVSAPRINEVLPAPTNRCRRCRMAAQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI3</accession>
    <name>A0ABV2ALI3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000726">
        <property type="protein sequence ID" value="MES1920538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="29990" checksum="3659C87335500F78" modified="2025-10-08" version="1" fragment="single">ISSEWFDLFVSFAFVAFLLLAHRILVRIIKSVGFFVYRKIIRNFYSDLPQNPVLPSPDLSAPANREENLEEKTELLSENIRSSERLEKNSAYILCAELKILRRLNIWANVTKRRLRQKVLLPLIDLFVASEKEFSVLSDSLRDEFIGKEKTIGLESSDSLVDFYGKRVDKDQTAFNALRRRAQLKKRLEKLFGKGDVYQLISACKELESKIKEENGVFKRKHAQVFTVIIVHCQFLLPRDGRISFRSITFQKTLLCNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ9</accession>
    <name>A0ABV2ALJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">60S ribosomal protein L20B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPL20B</name>
        <name evidence="5" type="ORF">MHBO_002220</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL20 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000736">
        <property type="protein sequence ID" value="MES1920561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00273">
        <property type="entry name" value="Ribosomal_eL20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028877">
        <property type="entry name" value="Ribosomal_eL20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023573">
        <property type="entry name" value="Ribosomal_eL20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021138">
        <property type="entry name" value="Ribosomal_eL20_eukaryotes"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10052">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L18A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01775">
        <property type="entry name" value="Ribosomal_L18A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002190">
        <property type="entry name" value="Ribosomal_L18a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160374">
        <property type="entry name" value="RplX-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein eL20" evidence="4">
        <location>
            <begin position="15"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22574" checksum="6CBEDD931781B3DE" modified="2025-10-08" version="1" fragment="single">RLRSNLNRMALDKKMKQYEIIARRRPSEKVTKPKSTKMQIFAENEVRALSRFFFFLQKYNHIKRSSSEVLSIKIIKEENPFVAKNYGICIRVQTRTNIVNMYKEYRALSRSEAVERMYDDIAARHRARKSCIEIIKVDVLPNEKCLKPETTTFHGDKVEFPQRYRLKRNAFKSKRKLYSYSKPNYFVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM4</accession>
    <name>A0ABV2ALM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000734">
        <property type="protein sequence ID" value="MES1920554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16044" checksum="0E397C9AD92CD10B" modified="2025-10-08" version="1">MLKYAKLNVAKAAYSNCAFDAINNFSKRYLAKKANFDEIVKKQIKLLSSKSPEIAQNIKKYSETFSNMPRVQKDQMLQATGVSDLVKRAPKILKAMPKFEFVAMVLWNHFNNPEIEEEMNNRPIKVMETNVLHNYHKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW0</accession>
    <name>A0ABV2ALW0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Calcineurin subunit B type 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PPP3R1_1</name>
        <name evidence="5" type="ORF">MHBO_002297</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000784">
        <property type="protein sequence ID" value="MES1920646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45942">
        <property type="entry name" value="PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13405">
        <property type="entry name" value="EF-hand_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="7"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="75"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18778" checksum="D2D998C3284C9EC3" modified="2025-10-08" version="1" fragment="single">VSKFTEEEIKLLYSRFQTLDRTKNGYISTEEFLLIPELSMNPLSERVVPLFVDELGRCNFENFVSFLWLFNRNCDVKKKREIAFRMYDCDKDGRISIEDLEKILKIMVGNFVSPVKLNSISKNTIEKYGGKDCDFLTLTDFEKVISDEELMKWMTIHFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY2</accession>
    <name>A0ABV2ALY2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002322</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000798">
        <property type="protein sequence ID" value="MES1920674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="116"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="24304" checksum="D302ABB57F49F36F" modified="2025-10-08" version="1">MADNKEIQKILINKNKTFVKELSRETLQILEQNLKNVENQKTVENIKIEKIALKMAEIYSEEMKKFFVAGNRLLTNCLKENIPFKNKLLKNSDEKEKFANNENEENEKWSIIETDNKILNERILELKFKLAKIENEKKSVKRDLENLDEAKLLSDPFNEQIDLLNQLLDKIETNLEIANDFSDFDEAILPQKSKQDFYGNAKFEFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM27</accession>
    <name>A0ABV2AM27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glutaminase</fullName>
            <ecNumber evidence="2">3.5.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">SNO1</name>
        <name evidence="7" type="ORF">MHBO_002328</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>L-glutamine + H2O = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaminase PdxT/SNO family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.2" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000803">
        <property type="protein sequence ID" value="MES1920682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002161">
        <property type="entry name" value="PdxT/SNO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021196">
        <property type="entry name" value="PdxT/SNO_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03800">
        <property type="entry name" value="PLP_synth_Pdx2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31559">
        <property type="entry name" value="PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31559:SF0">
        <property type="entry name" value="PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01174">
        <property type="entry name" value="SNO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005639">
        <property type="entry name" value="Glut_amidoT_SNO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="Class I glutamine amidotransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51273">
        <property type="entry name" value="GATASE_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01236">
        <property type="entry name" value="PDXT_SNO_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51130">
        <property type="entry name" value="PDXT_SNO_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00049534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="217" mass="24527" checksum="5F68858775B111C3" modified="2025-10-08" version="1">MALQPKFGDFSKLTVGIIAIHGDFTENKICVEKLGAKTKLIRSSYDFDESINAIIIPGGESSTISLLLNKDRILLNKLVNWTKNGYPTYGICGGMILLSEFTRSTEEKKEKAGLLRALRMTVDRNFFEKNGFCFKKELEIPIFEDPKFCGIFIRGPAITKPVDKEIEVLCSIEIEKQKVILAVRKGAVLATSFHPELTDDLRFHKMFLETALDFNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM55</accession>
    <name>A0ABV2AM55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000849">
        <property type="protein sequence ID" value="MES1920760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="117" mass="13678" checksum="94EB8C4F19FAE2CC" modified="2025-10-08" version="1">MEIGYSSKNLTPFSAGQNLEILIKRFSVMNDPKFLSRNQNFYCQNSINLSRLYEKLASSASNFSWLNLCNFGVDKMVLAFNWQFYYNDINILESYIRLTLHLVTLYPIFLPSVLDKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM80</accession>
    <name>A0ABV2AM80_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002164</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000705">
        <property type="protein sequence ID" value="MES1920498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="22"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="73"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="93"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="149" mass="13801" checksum="53BD52C23D3CF83C" modified="2025-10-08" version="1">MKEDIELKNCSPNNFSGPPGPEGLIGEPGLPGEVIAGVPGEKGPTGPCGCPGRTGNPGPPGEPVDGPQGAEGPPGPPGPPGPPGEIPQSVIGPPGPPGPSGPVGPPGDAPRGPEGETGDVGAVGGPGNVGFPGLNGPPGPPGPPGPPGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMC2</accession>
    <name>A0ABV2AMC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002417</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000861">
        <property type="protein sequence ID" value="MES1920780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="27323" checksum="098BD7AF3D9A0073" modified="2025-10-08" version="1">MHCQMQLTRKLIISAILSTFWVSLFDDIKFDSLILPNEKSLTMKLAKQTFSNKNLNSKIAISVHVTASDINKALNFSKHILERINSQRPAKKYKFVNLDSEILECNNLSSDPFFSSQCISKKIARYILKHRKVFFLFSLFSTPFDSVSFLISVFDDTAPALMYTRKGFFGDEKSKNLKVRNCIFVMISEQKSKIFQNFSENIKETVISKQMLSFEKENGISERFSHRIIGRIPIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMF4</accession>
    <name>A0ABV2AMF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000743">
        <property type="protein sequence ID" value="MES1920573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10490" checksum="25D07D8B7C2CCD7F" modified="2025-10-08" version="1">METDIFQNRIKCPIKRKNGESEAYSPLEEFIHKKVMYDPYSYLRNWWKFSVNPWGTVKSDKKDKLPLDRFIFLSLAKKEVDEQSKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN97</accession>
    <name>A0ABV2AN97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002721</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001109">
        <property type="protein sequence ID" value="MES1921145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11820" checksum="4F8E83FC7793CCAD" modified="2025-10-08" version="1">MLENSSTLTTASLCENGDNQMRLAVTRYGTVDISWGHHAFDKRHTHIIHLYVNKYCNKILSHSNWIKLRNDESKKLKDYIVLIELLHLFTFKISSTIGFGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANC8</accession>
    <name>A0ABV2ANC8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002744</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001126">
        <property type="protein sequence ID" value="MES1921175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17917">
        <property type="entry name" value="DEXHc_RHA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002464">
        <property type="entry name" value="DNA/RNA_helicase_DEAH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF136">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX35-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00690">
        <property type="entry name" value="DEAH_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12966" checksum="C9F8340D349A51E5" modified="2025-10-08" version="1">MDDPLLGAYSVVVLDEVHERSVATDLLLGLLKKIMRKRRDLRLIVSSATLDATAIKEFFDRALMLGKFSKEKAFKEKSALLFVEGKTFPVGFKRFFQFLTKIIKKIKLTNKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ9</accession>
    <name>A0ABV2ANJ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Formin GTPase-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002801</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001186">
        <property type="protein sequence ID" value="MES1921246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010473">
        <property type="entry name" value="GTPase-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06371">
        <property type="entry name" value="Drf_GBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Formin GTPase-binding" evidence="1">
        <location>
            <begin position="29"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15572" checksum="CBB5B40EE76EB678" modified="2025-10-08" version="1" fragment="single">MPGIKQILRNFFKNEKKIDKSSKMEPLPPMPDKQTLDKKFQEFMYSISMPAQTVEKMEVMSDENKWIMICQQDKKTSKEKTDDWIKTLKKPATESTLIKFKVIITSVDVKWMKSFVEKNGLFLLVSQNLSEST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANQ4</accession>
    <name>A0ABV2ANQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nucleolar zinc-finger protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ZPR1</name>
        <name evidence="6" type="ORF">MHBO_002676</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ZPR1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001072">
        <property type="protein sequence ID" value="MES1921089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.1040">
        <property type="entry name" value="ZPR1, A/B domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.420">
        <property type="entry name" value="ZPR1, zinc finger domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004457">
        <property type="entry name" value="Znf_ZPR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040141">
        <property type="entry name" value="ZPR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042451">
        <property type="entry name" value="ZPR1_A/B_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056180">
        <property type="entry name" value="ZPR1_jr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042452">
        <property type="entry name" value="ZPR1_Znf1/2"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00310">
        <property type="entry name" value="ZPR1_znf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10876">
        <property type="entry name" value="ZINC FINGER PROTEIN ZPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10876:SF0">
        <property type="entry name" value="ZINC FINGER PROTEIN ZPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22794">
        <property type="entry name" value="jr-ZPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03367">
        <property type="entry name" value="Zn_ribbon_ZPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00709">
        <property type="entry name" value="Zpr1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Zinc finger ZPR1-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19701" checksum="FD30B178C44CDB12" modified="2025-10-08" version="1" fragment="single">MVSVDIPKFREIIIMSTNCDHCGNRTSDLQGSSYIHEKGKEINLKMTTAEDLKREVVRTDSTVVSIPEIEFVSYQGPNIGEITTTEGLLIKFKEQIESIYKRELENKKLTEKLKKSYQKNISDLKDLAELKKPFTMNFKDVLGDVYVEKLKNDQNLKIDFFERTKEQNAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS0</accession>
    <name>A0ABV2ANS0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002864</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001241">
        <property type="protein sequence ID" value="MES1921321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="317" mass="35730" checksum="D312542C83A80767" modified="2025-10-08" version="1">MSELKNIDIQVLDASSSSDFVAVEDRSDLKIQSKMPLFAADFIENQNILLIGGGGGGRTGIRNGVIIGRIEGNGSQKTKDQNLKKMVFLKILNFDQNLARCIFVKSDLIAVSYGKYLVFIKNSEISNLLNEDRSPIEKIECERIGFNIKDPDFVVRHMSLNPDGNKMAVVISDNTISLHLLQIGSKWPKMEFEGTIIAPRQITSIAWSPNGQEIVIAYNWKYFSVFKSSSPHNEIARIPIESWLHRNDQIMAFKEAIFVNQKKLLFAVNLLKGKSPISGGAICFYERSFNDSQNWILKRFCVVNKSGVVLKVFCQNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV6</accession>
    <name>A0ABV2ANV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Actin-related protein 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ACTR6</name>
        <name evidence="3" type="ORF">MHBO_002883</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the actin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001265">
        <property type="protein sequence ID" value="MES1921347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00022">
        <property type="entry name" value="Actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00268">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="26260" checksum="EA36793F045A8781" modified="2025-10-08" version="1">MNKFPVVILDNGSDLIKIGNRQTEKPSICHNALLKTNKNIYIADEIDSIQNTFNIFNINRPFSNSILTDFDLQNEIWNKVFNKMPQTKLNQKSLLMTESLLNPKLVRSNICETIFEKFDFNALMLSNGLKFAPSTITNPLFNKNCCVVVDCGYSNTRIVPIVNGIPINFAAKTTIGSKLLNERLGQVLSFRQFDVKKDYFLTEKIRINSCYISNNFETELNEIKFQNIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY0</accession>
    <name>A0ABV2ANY0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002909</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001292">
        <property type="protein sequence ID" value="MES1921375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12763">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12763:SF28">
        <property type="entry name" value="GEO10507P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="3" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="126" mass="14180" checksum="795B6C3140622559" modified="2025-10-08" version="1">MKETKKQSYRCPPVEKNSNEVLKITFFAAASAILLKVASSYRSKRGAPMTGKHSPGLFRNFYEGGFKTKMDRSEAALILGCRRTSPQTLILKKYRILINANHPDRGGSPYITRKINEAKAIMTNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY9</accession>
    <name>A0ABV2ANY9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002748</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001129">
        <property type="protein sequence ID" value="MES1921179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20789" checksum="0A91CD28D82C0FF8" modified="2025-10-08" version="1">MAKISKNNLENTVLLVRTALPLKQHFPERVKWFAASICSLKMDLWVIIDDSQFESSTEKAKKALGDGIRNVRCATVNKNDFFRIYKKQNFGCCPDNPLYCYHAEAVNVWYSKYVESSEHFKQKYRYFWFWEDDLAFSGDVSKFFEFYADSEADLIAINYETCDVINFLSNLDFRGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP87</accession>
    <name>A0ABV2AP87_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA mismatch repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MLH1_4</name>
        <name evidence="2" type="ORF">MHBO_003011</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001401">
        <property type="protein sequence ID" value="MES1921481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032189">
        <property type="entry name" value="Mlh1_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16413">
        <property type="entry name" value="Mlh1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair protein Mlh1 C-terminal" evidence="1">
        <location>
            <begin position="108"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="342" mass="39569" checksum="00833E7DC9D17203" modified="2025-10-08" version="1" fragment="single">VIKTLPESLKMENCNLRSKRKITEKRQNGVESIPTRPKDTVRVELFKNQDRTIKSFFDDIDKKSTSIDNNDKKSTSIDNNDKKSTSIVVKDKKSISKRFDPKSDLSFQEWLSNLKMGRDERVSKILKNFVYVGDINGYLMLIQCGKKLLSLNLKPIFKVLLKQNFLANRKNADILRWEKPLVVEEEISSYLSKKKRRKGKDQSRPLSRKMCSLLVAKRTQLRKVGITISEKGALESIPDLLPEMEILKERTGKFLGKMAEEAREDPKFGQSLESLDRILSFFWILYLSKDEGISANASRDTFMKSVLVPKVRKVYPLATFLDDKTFVQISSLDRFYSSFERC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APA4</accession>
    <name>A0ABV2APA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003038</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001431">
        <property type="protein sequence ID" value="MES1921512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16099" checksum="1C8293BEB98B1973" modified="2025-10-08" version="1">MKNRVNFNIKLSIDQIELDFISETESEDDKAMMVKEQNFGMEGFLRTFITLLENKTIVEWFVVSKTKKNLHVDLTWNLYNMKFEGDNIGSEDEPRVQKIVRPLEKLSVGKVVMVDVKESIDFKVNAIWLLLIIWPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB8</accession>
    <name>A0ABV2APB8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pre-mRNA splicing factor component Cdc5p/Cef1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002803</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001188">
        <property type="protein sequence ID" value="MES1921248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047242">
        <property type="entry name" value="CDC5L/Cef1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021786">
        <property type="entry name" value="Cdc5p/Cef1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45885">
        <property type="entry name" value="CELL DIVISION CYCLE 5-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45885:SF1">
        <property type="entry name" value="CELL DIVISION CYCLE 5-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11831">
        <property type="entry name" value="Myb_Cef"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pre-mRNA splicing factor component Cdc5p/Cef1 C-terminal" evidence="4">
        <location>
            <begin position="178"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="194"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="110"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="529"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF11831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="529" mass="61466" checksum="AFA8358E20A5FB44" modified="2025-10-08" version="1" fragment="single">EDRDNLENKEEFDFKKLTTERFEGNPVKREALERRKDIKKQKLYKELNLPAAVQELNRQNDPKNFISKRPDLDLPAPQVSNEELENIARLYPADENGAFGVNNGISNGETPSMTNQNLMTPSRTPLTGDFRRRDIEDNIALKSAKNPLLGGESVQLNDPDFAKKGVNLENRKNSEAVTPNVLVSSIMQKSGLTPLANSKTPLTPIMSEGKTPLRDSLNINSVTPKTPSILSEQYLDPNFDNKIDQKGLRRKRRRLQKKLNSLPQPKLQKFLQISDSPKTGNADQLESGVFRTKEEKEKLLKFSHDPDMEDFLEDQEQKNKKFDLQNLRRKSQVVQRNLPKPLEIGFDRKFIKMGKFDDNFADQIDKKYLRMAQNLIETNYFKIIENDVENDENFVYDSEEIKYIEKSRKLISDEIEEMRKMAKERFSDLSKVDFQPEKKTIFNPRSNSFVFYDDLTTSKKLVATKAEFSMLAESYKDLKKRNEKTTKNVKILLDGMMRRVAKIFSERKDVQKNINSKEIELETFNRIYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE3</accession>
    <name>A0ABV2APE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001468">
        <property type="protein sequence ID" value="MES1921543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16644" checksum="4BE8303F2193F219" modified="2025-10-08" version="1">MVENMIDLVKTHSKIENVIFISFWPIPLYQIRKIMPEVEVCLNYTDDHLRCLIADHKYHYFLKYLVYPFDILLMYMSKEIFSFLVGATMIGPNHELLSPSDIARFKKEDLQMFEYFYSVRLKIYVDCERRIVEKVLCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ0</accession>
    <name>A0ABV2APJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001523">
        <property type="protein sequence ID" value="MES1921589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="152"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28537" checksum="539973819C6B1CA2" modified="2025-10-08" version="1">MTSSLDEKIQKLRDLLLNNSESLKNLIDEQNNCSKNKDNHFYRSQWQYTAECDNLIQELRLPRPEHFASTNKHSFVFDPLKYSQKIDLFRGLKKYCKPLYMEDPLPPSPPNHFIPKAPASESFTEMNIPIAGLNKSNYKRSPRIFVSEIDESESSAECLHEQTEESGNKDAAPAPAAEPQTLTKVDIVVQNRPLQIALDSKRMLVKGVLEGEGKKAGLRIGDRFELVNGKPASMTLLSMEPLPLKLTVLRNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN9</accession>
    <name>A0ABV2APN9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002947</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001332">
        <property type="protein sequence ID" value="MES1921416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="6725" checksum="B5162F0FB2DA07DF" modified="2025-10-08" version="1" fragment="single">SAEGFEGVAVDSPVDVPSVEGIVLILETGDVVSAEGFEGVAVDSPVDVPSVEGIVLILETGDVVSAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP5</accession>
    <name>A0ABV2APP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Subunit of the glycosylphosphatidylinositol transamidase complex-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">GPI16_1</name>
        <name evidence="1" type="ORF">MHBO_003162</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001573">
        <property type="protein sequence ID" value="MES1921634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007245">
        <property type="entry name" value="PIG-T"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12959:SF11">
        <property type="entry name" value="GPI TRANSAMIDASE COMPONENT PIG-T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12959">
        <property type="entry name" value="GPI TRANSAMIDASE COMPONENT PIG-T-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04113">
        <property type="entry name" value="Gpi16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="33557" checksum="1358645E59916600" modified="2025-10-08" version="1">MIILFAPFFFFPHFSKQNFDNPFTADYFDEKVVVRPLSDGRVITHFDFFISSDLKNGQIGNFLFPKSIRQIIEKTDVRHLELSFAQGSWDGYFGEEFAPSQNGLELEADFEDGEEVEKRWKELLDAFSGNFCGSFKDSHIKKFRTFTPINEKFKRVEIVPNEPFCVENLSAFLDLLPCRAHAGMASLLNQVSSFDSDYISAKLIADKNCSESGCNLKMEILITIAKFFKKKIGKSNLFKMSDLFDRNYKNCVLSKNRKIVFEALSSVDFFEFFEDDNVFFDFFLIWFIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU1</accession>
    <name>A0ABV2APU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002887</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001268">
        <property type="protein sequence ID" value="MES1921352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045139005" evidence="1">
        <location>
            <begin position="24"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6339" checksum="BCFCE92AFB149D68" modified="2025-10-08" version="1">MMFYFGLATALLLSIEIFIPGKTRKMLNDAYFVIVRIGYEICDIFERINDNITSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV3</accession>
    <name>A0ABV2APV3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003229</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001647">
        <property type="protein sequence ID" value="MES1921700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="9682" checksum="15392B70FBB03506" modified="2025-10-08" version="1">MNEEKIVMIPLVAHENAMAREGKKLVAVIIAFAVVCSLLIGYIAFDRHKDSQSEFETIEYTAESNDSGHAVASGEGDVNINGESDIQEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ11</accession>
    <name>A0ABV2AQ11_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003083</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001476">
        <property type="protein sequence ID" value="MES1921554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="27"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="110"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18300" checksum="3B036668B97C5BA6" modified="2025-10-08" version="1" fragment="single">MSMSKFAHFSYKKYKRNSYSFIMPESFPVWVGNIPSQVNDFDLSLIFSRCGEIHSTRIVSPVEMPARYGFVNFTTAEAQRLALTECKFLKMRGKQLVLNNSTAKSSSNGFLVAVRPLPSGVSPEEIGRVFSVFGQIKSVRIYYEGQPREFGSIKFAEESGQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ93</accession>
    <name>A0ABV2AQ93_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tetratricopeptide repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003382</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001849">
        <property type="protein sequence ID" value="MES1921846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="149" mass="17434" checksum="0F7EB3CBF8F34CC1" modified="2025-10-08" version="1">MMDTDIAEMRNKVFTSKENLQLDSALFFSEKLVLFSDEFEDTKNHCHIMLALSKFRELLFFLRKKNLLINFVFPENQENKSLSKATELIFFHLIAAKCYNKIKKYSDAIEVLNENAKSGHEIIPNTQKFFFVANANFDEATTKFKKAIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQB5</accession>
    <name>A0ABV2AQB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">54S ribosomal protein L23, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MRPL23</name>
        <name evidence="4" type="ORF">MHBO_003407</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001886">
        <property type="protein sequence ID" value="MES1921872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00392">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1180.10">
        <property type="entry name" value="Ribosomal protein L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01366">
        <property type="entry name" value="Ribosomal_uL13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005822">
        <property type="entry name" value="Ribosomal_uL13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005823">
        <property type="entry name" value="Ribosomal_uL13_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036899">
        <property type="entry name" value="Ribosomal_uL13_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01066">
        <property type="entry name" value="rplM_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11545:SF41">
        <property type="entry name" value="50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11545">
        <property type="entry name" value="RIBOSOMAL PROTEIN L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00572">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52161">
        <property type="entry name" value="Ribosomal protein L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="209" mass="24406" checksum="972E2EE0BCCE54EC" modified="2025-10-08" version="1">MKIGACAAGVVRKHPVTWRTFDATDQRVGKLAQTLSKLLIGKHKPTYRPNIDNGDVCVVINAEKVVFTGKKWLLKRYKSHSGQPGKLKSVPAHRLLEQKPEEILRRAVKGMLPNNNTRKFRLERLVIHSGPFHPFQWEFAPSEVVPPKDDLARKSEATHRHAFVQKPFGPIFWKDKLKYKYSPKLRRKMWKDFYDRENIPQTERKIKTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG6</accession>
    <name>A0ABV2AQG6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">peptidyl-tRNA hydrolase</fullName>
            <ecNumber evidence="1">3.1.1.29</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003436</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>an N-acyl-L-alpha-aminoacyl-tRNA + H2O = an N-acyl-L-amino acid + a tRNA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:54448"/>
            <dbReference type="Rhea" id="RHEA-COMP:10123"/>
            <dbReference type="Rhea" id="RHEA-COMP:13883"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:59874"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:138191"/>
            <dbReference type="EC" id="3.1.1.29"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PTH2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.29" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001920">
        <property type="protein sequence ID" value="MES1921905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1490.10">
        <property type="entry name" value="Bit1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023476">
        <property type="entry name" value="Pep_tRNA_hydro_II_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002833">
        <property type="entry name" value="PTH2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12649">
        <property type="entry name" value="PEPTIDYL-TRNA HYDROLASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12649:SF11">
        <property type="entry name" value="PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01981">
        <property type="entry name" value="PTH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102462">
        <property type="entry name" value="Peptidyl-tRNA hydrolase II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00048707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17590" checksum="08862AF523ACD59C" modified="2025-10-08" version="1" fragment="single">MDIDPYKKSIGKKLEKMGFSNQDILEAFNKLKSRFLNQMISLIKQHKKLDTIAEKYEEIPNDLKAVFIVNSSLSMKKGKVIAQCCHAYDGILQKVTDSNCALIEKWRFDGAKKIVLKCNSLDKMLRMQKMARKNDILNYFVTGFRIKLFFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL5</accession>
    <name>A0ABV2AQL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001951">
        <property type="protein sequence ID" value="MES1921927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="22875" checksum="0106DA03CC1629CE" modified="2025-10-08" version="1">MFFVIRKKGKILVDKAEIIDLFYKLTSLLILAATGLVLSSLNFFIWNYQIRITIAYPLNAIYVLSILIYFLMKNPFGLRIFYSIICAIFATVFVVWTVDGALNGNIIFCAQTFAAVSIVLIFVISLCSFSTSILTLSYIRNVVLTIIATLVLEGIWSVDSDDIGFVFVCLLLCWEMIFNLLCSYKLFCAPKVEESIVSKIEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL7</accession>
    <name>A0ABV2AQL7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003182</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001589">
        <property type="protein sequence ID" value="MES1921652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="2">
        <location>
            <begin position="85"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="159"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="20586" checksum="8C03F92191CED111" modified="2025-10-08" version="1" fragment="single">MSYSNLSTKDKDDAITSTKNDEKKDEKNDENDKIAQNLKNSEKTKNEKNENDKSKTEPEKIALIQKNENDSSQNKQPTKIANDKITINAIMVGQKFESISISPKSSVLDLKNEFAKEKKEDLKSLSVIYMGRFLKDEDSLVESNIVNGASVHIMKARKTANQTNEEENNNTESADIENAINSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW8</accession>
    <name>A0ABV2AQW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003286</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001724">
        <property type="protein sequence ID" value="MES1921757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="12733" checksum="33803BAE514669FA" modified="2025-10-08" version="1" fragment="single">CNNVSIESGNNKILSPPPLNITDENAASLGNVDSSPVEDAPSLESSKSPMISMREIEKIYPTYEDVSEITGNEFDEKVTTVENYIEPLPSVLCKERHSYADPGDKWRPTYLTAIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR45</accession>
    <name>A0ABV2AR45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003654</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002269">
        <property type="protein sequence ID" value="MES1922140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="19"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="21161" checksum="D0796390509EC55F" modified="2025-10-08" version="1">MEKIGKNIISIGKIIEEICKNLNQNLKNDKTLDKNLENDKFSEKDQNLNEDKFYEKKEKSIEDIEQDFSVYETDRKFDENEISDEIRSKIKLKAMELLNKQINLKKIANRKIKKVKTTSMAQEDLTIEDPRFLISNSIFQQISVLFLTNKQKYQFFKKILFLQKEKRFTNGLKVALKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR59</accession>
    <name>A0ABV2AR59_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003659</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002274">
        <property type="protein sequence ID" value="MES1922144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="81" mass="8914" checksum="E6C3E6EEE73CD304" modified="2025-10-08" version="1">MAFIVFYGDSDFSWNDGAAKNVSKSASKNVFYCGFEIDLFSAVFPLILTSSLMAAASPILISLLLISYSNFFYFLLGNLAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA4</accession>
    <name>A0ABV2ARA4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003703</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002366">
        <property type="protein sequence ID" value="MES1922189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="379" mass="42493" checksum="C9BC8C2BA71EE85F" modified="2025-10-08" version="1" fragment="single">MDTLKNIVQKPKLVSDVLRGSSSAGRREEMVNFAEIITAARYCNLAELEIAKPGTAVKKILSNSIEDFEIIAMFDGVETNDFQVHLPNDAPAGVRERISSLLRRRDAFFNPHSAASTVTRFPPPQGATGASTLKGGSNGLIVNKYLQRDASGRTTEKKQNESDQKFFYAILIRNINDQRCDINHPLKLAGAMEKIFGKVAGCYKLPSNDVLVSFHSQAEAAEALNKQNEALFLGDNCMLEKWHDAKRTFAIYGYHTSVTEKEFTDYMTKESKLNVKIVKVLSPTSKRSTIFVEALNKDTYFSLMNTRTIKVGFERYSIAKVRKKKIKQCRRCYGFDHTAKTCSQESICRHCSACHKEDDCPEKSKKCKNCSGSHSADSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ1</accession>
    <name>A0ABV2ARQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003558</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002131">
        <property type="protein sequence ID" value="MES1922042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="295" mass="34561" checksum="5EB151479F675DE2" modified="2025-10-08" version="1">MKDALRFFNDIGSILYFDSADLEETVILDVQWFVDSFKNIITDNQDVELERIENEMWKRFYHTGELDDKLLESVWKETEDFGESFLYHKEELLSYMQHLGLLARGSKETNNVHLIPCMTKRSISDKISQKYAQEYVFSYKFEFFPNFIFWRFVVACMCSPGWAILDMDGHKCIFKDSCILRYNRVDVIIRINDNILDVQILGLQNSSVPSGLKVKILREINEILQRLTKTFYKNIMFTIGCRCKATKIFELRSARFLSENELREIKCSSSKLCSVCEGESHSVAVEDLSVIFQEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB8</accession>
    <name>A0ABV2ASB8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Bacterial surface antigen (D15) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003106">
        <property type="protein sequence ID" value="MES1922566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.50">
        <property type="entry name" value="membrane protein fhac: a member of the omp85/tpsb transporter family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000184">
        <property type="entry name" value="Bac_surfAg_D15"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01103">
        <property type="entry name" value="Omp85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bacterial surface antigen (D15)" evidence="3">
        <location>
            <begin position="23"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="25441" checksum="A317202D83071AB4" modified="2025-10-08" version="1" fragment="single">NLKSVLDNTIIQSTKSAICFSHLIYNTTDDITLPTKGYFLKSNYELAGFGGDTAHFKYTTKHGSYFQLPKLSQFTIGITTNFGFIRAFDSFMRPHKPKKSKLNDRFFLGGIDYLPGFKDNSVNISDKTIGGDLILSNRLSLSFPLKLPYLDKNRIRGSLFASSGSIAQFNPEKAFLVNNPIRNTRFSVGAAVDIPMEGLKGSFRMSLSKALNPFKNDSTARFQFGFVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC9</accession>
    <name>A0ABV2ASC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fidgetin-like protein 1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">FIGNL1</name>
        <name evidence="4" type="ORF">MHBO_004094</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003137">
        <property type="protein sequence ID" value="MES1922580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050304">
        <property type="entry name" value="MT-severing_AAA_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23074">
        <property type="entry name" value="AAA DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23074:SF17">
        <property type="entry name" value="FIDGETIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase AAA-type core" evidence="3">
        <location>
            <begin position="1"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14092" checksum="AE0F7F84D922DB3F" modified="2025-10-08" version="1">MIGKAIASEAGAKFFSISASSLTSKWHGEGEKMVRTLFAVARNESPAIIFVDEIDSVLSQRSSGEFEATTRLKTEFLVQLDGVRNSSDEKVLLVGATNRPQQLDEAARRRLSKRLYIPLFYLFLKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH3</accession>
    <name>A0ABV2ASH3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tryptophanyl-tRNA synthetase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">WRS1</name>
        <name evidence="2" type="ORF">MHBO_004101</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003152">
        <property type="protein sequence ID" value="MES1922587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004830">
        <property type="term" value="F:tryptophan-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10055:SF1">
        <property type="entry name" value="TRYPTOPHAN--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10055">
        <property type="entry name" value="TRYPTOPHANYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00030268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19975" checksum="9A7F2555D08F4E64" modified="2025-10-08" version="1" fragment="single">MLQILKTSTKNIFSKRLIKNTAQQLTTNLDKPKLTERIEMTQKVTPYEVECSMKKIDYDSIVEEFGCNRIDQKMLERFERLTGKKPHPFMRRGLYFSHRDFDKILDSYEKKEPFYIFTGRGPSEGDMHIGHMIPFIFTQYIQSIFDCPLVIQINDDEKLFFKNVELDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK7</accession>
    <name>A0ABV2ASK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004171</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003338">
        <property type="protein sequence ID" value="MES1922654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="288" mass="34089" checksum="316D7D0941049315" modified="2025-10-08" version="1" fragment="single">KNKLTEKDEISENEVSESSQKSDENEEIKNVEKLNNSVLEIFEEDKPFFEIDKKSEINKNYKMSEHNKNEKKSFGLFNYMDEHLKKRNLEVKQKKERIVEKSNIYDAFDKNFLNEKNLSSVNELVYPILAKIMKQNRRFKTALEKFLEFNFDNGNPNDTNLPFYNTDAKSSLPHRTFSSMLKFRLLKSDYIYFSEDISSYDNAEDLSAKKALCELEEKGLLFVPNFREREENVPQKYSENFTKCKICKILIPVSEIRLHFLMCSSHLDQQKSTFEVYKETSKFSGRTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS4</accession>
    <name>A0ABV2ASS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004249</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003514">
        <property type="protein sequence ID" value="MES1922726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13076" checksum="CB641FCF48BCE512" modified="2025-10-08" version="1">MLKRQFITKLLQLINDQSTNDAIDWCHDKKGSSLTRQLNNYQFSMKKYPDSIVWKHSSFNKNKQIQVITKKAKRGDYCDAYFSAECMRLILAGDEVKETTDKVVFVQTHYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV7</accession>
    <name>A0ABV2ASV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004074</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003091">
        <property type="protein sequence ID" value="MES1922559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="10926" checksum="B3D58CB0B0C3400B" modified="2025-10-08" version="1">MTPNQPSERSNNHMRIPNHHLQLLDNHMCLLDHHLQLVNHHLQLVNRHLQLANHHPHMVNDYLCLSNNNLYFQNNNLYITDKHSQLPNHNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT22</accession>
    <name>A0ABV2AT22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004346</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003812">
        <property type="protein sequence ID" value="MES1922820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050588">
        <property type="entry name" value="WNK_Ser-Thr_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13902">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="127"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="27197" checksum="5356A16CFF73CB28" modified="2025-10-08" version="1" fragment="single">FGMCVLELCTNHYPYEECINPAQIYKKVVNGNKPKILSKILDLKTKNFIDQCLASESHRLSSIELSKHPFLKFEASSDMFAVKMAKNKSIEIENNKDIDIKNYEYKENQNETKNTHLKFYDENIKQNEVSNNPETQYSQTKSKNNDENNEFIYNSKNNSIEIKNAKKHLNEENNSLKTFLPKSKDKKIKLQHNNIFKSEINNDYKNNIANSEISLKKISKNIIKVYLQLNYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT48</accession>
    <name>A0ABV2AT48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004379</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003885">
        <property type="protein sequence ID" value="MES1922851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24173">
        <property type="entry name" value="ANKYRIN REPEAT CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24173:SF74">
        <property type="entry name" value="ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00023">
        <property type="entry name" value="Ank"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13637">
        <property type="entry name" value="Ank_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="70"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="98"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="131"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="164"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="197"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="42"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="29229" checksum="4181BC4258114D8A" modified="2025-10-08" version="1" fragment="single">MDIPSQVTCLRLACASGRLEMVNLVLSHVKLECVTYSGGGGDVDDDDKDDDSDSYDKDDDSDYYDSDDDHHVTPLMVASLSGFNDIVNVLLEKGAHAKQNTAVLLVCFSGHIDVLDTLISYGVDVNFRDKTKLTPLCFVSAVGNVEIMKCLLKNGADVNLFDNNNTLPLSYASKKGNLEIVRYLIDSDADVNLSNKDGETPLYHASKKGHLEVLKYLMEKNVDVNTGASCLSAACSGGHLDAVKYLIDKVDVNKVDPFVDPALHCACRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT71</accession>
    <name>A0ABV2AT71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003871">
        <property type="protein sequence ID" value="MES1922847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="24256" checksum="373613E45E9DD357" modified="2025-10-08" version="1" fragment="single">MIGPTNKQRQKEYEVEELRAYRHKTPLNSMFSLKGSIIFDIMAEYFGLVIINLTLNMIIGLQKPSGNSVLAVLKKATQVLDSFSLATIMFPLSFVLAIIHSVRIETFFKSIILIESFAAFLLVHIPSLELRQEILDYVQVMIMTQYEHMTDDFSIYDVTTDPRYLDKYKEFRRNNKQRSVRTDQYWFVFKIYNLLNKQSDRDLIYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP6</accession>
    <name>A0ABV2ATP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004578</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004459">
        <property type="protein sequence ID" value="MES1923043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="200" mass="23100" checksum="1692A8DE02B8A4D2" modified="2025-10-08" version="1" fragment="single">MIISCKNRQPINIELEQHRYSCTLNDVYITRHIRHDHSFEYICYNGNVILLHCYNAMLSSAFGYANVSKLSETCDHHCFLNPSLFSKGFVEPYVPGQSLFCKASWITELVMNNDLQYFVDFGVYCNDAELLFVDDYSKSPISNINCVDIDIDSCTTSEVSKTFRNAYYFNCGNKKIHFYCAAKNYDNDSKWNSKISNACH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU9</accession>
    <name>A0ABV2ATU9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Spindle pole body component</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">TUBGCP3</name>
        <name evidence="6" type="ORF">MHBO_004609</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
            <location evidence="4">Cytoskeleton</location>
            <location evidence="4">Microtubule organizing center</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TUBGCP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004546">
        <property type="protein sequence ID" value="MES1923072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007259">
        <property type="entry name" value="GCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041470">
        <property type="entry name" value="GCP_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19302">
        <property type="entry name" value="GAMMA TUBULIN COMPLEX PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17681">
        <property type="entry name" value="GCP_N_terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="2 4" id="KW-0493">Microtubule</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gamma tubulin complex component protein N-terminal" evidence="5">
        <location>
            <begin position="2"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18414" checksum="7F17A0EDB549DC1D" modified="2025-10-08" version="1" fragment="single">MLTQLEHLIDGKKSDQNLLNGFDPPLTIPKLLVISREAAQKLKFISNVCDSIKNLKGTAACSELYLISENEFGQFDQIAKSYFEKSLKPVWKISSNWLLNGQISDAFSEFYIRKNELGKFELREEMIPNFIPEKTIEQILQIGRTVNYIRTHTKGDVKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW9</accession>
    <name>A0ABV2ATW9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cleavage and polyadenylation specificity factor subunit 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Cleavage and polyadenylation specificity factor 100 kDa subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CPSF2_1</name>
        <name evidence="3" type="ORF">MHBO_004640</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004669">
        <property type="protein sequence ID" value="MES1923100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="entry name" value="Ribonuclease Z/Hydroxyacylglutathione hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027075">
        <property type="entry name" value="CPSF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45922">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45922:SF1">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16661">
        <property type="entry name" value="Lactamase_B_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Metallo-beta-lactamase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="24203" checksum="6367B9D98E794593" modified="2025-10-08" version="1">MGLMTMYDAFQNATSNNKQFTHFTIDDVDFAANLFVPLKFCQPFRLTGNGEGIQISAINAGNVLGGTIWRISRESDEVVYAVDFNHKIERHLDRSHIETIFRPSLLITDCLNFDLQHQPRSKRDAELIKSVMACLVGGGDVLLPVDAAGRSLELLLLLHSHWKINALVGRFSLVFLAHTARHSIDFANSMLEWTNGRCQKEFDASKRSPFDFEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX9</accession>
    <name>A0ABV2ATX9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004663</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004753">
        <property type="protein sequence ID" value="MES1923121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="169" mass="19530" checksum="795EB761988B79DF" modified="2025-10-08" version="1">MINNENFNDRAQNGFSNRKSFAGDSKLQMNGKTENDNFGPSQNGEKIEAILLMRNNANFRQYGQYASLASKNDWIVHIVPPFEFRKDILRYFAVCLYSVYRRGENHPTFRKMTNAKRFAITSSFLSSFEAGMVKNDVGYLTEAKWLVSDKVKTSLNFFNFCDLIKSIFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU38</accession>
    <name>A0ABV2AU38_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UvrB interaction domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004682</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004869">
        <property type="protein sequence ID" value="MES1923139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2060.10">
        <property type="entry name" value="Penicillin-binding protein 1b domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041471">
        <property type="entry name" value="UvrB_inter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17757">
        <property type="entry name" value="UvrB_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrB interaction" evidence="3">
        <location>
            <begin position="2"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="6138" checksum="353E26DECE13FE85" modified="2025-10-08" version="1" fragment="single">EEAGTFSKKGEIVDVYPINGNPIRLYYFDDMMEEIYPIDLNDHKTIRTAAIET</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU47</accession>
    <name>A0ABV2AU47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004995">
        <property type="protein sequence ID" value="MES1923177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10361" checksum="02D1A721D395DC54" modified="2025-10-08" version="1" fragment="single">MENLIMPFVLPENSHLRQEIQDWTEISFDEGRKELVKIYEKIQNVISMNENDHDFHEELLATCKDYKKALEIRKQDLSRRDASIVIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE5</accession>
    <name>A0ABV2AUE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">60S ribosomal protein L36A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPL36A</name>
        <name evidence="6" type="ORF">MHBO_004789</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eL42 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005265">
        <property type="protein sequence ID" value="MES1923244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.450.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000552">
        <property type="entry name" value="Ribosomal_eL44"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053708">
        <property type="entry name" value="Ribosomal_LSU_eL42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10369">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L36A/L44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00935">
        <property type="entry name" value="Ribosomal_L44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="Zn-binding ribosomal proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01172">
        <property type="entry name" value="RIBOSOMAL_L44E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8294" checksum="C49C3472522D9F80" modified="2025-10-08" version="1" fragment="single">YKRGKESLHRLGKRRYDRKQKGYGGQTKPILRRKAKTTKKVTLKLKCKECKKSSQFIVGRCKYFDLVNES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR4</accession>
    <name>A0ABV2AUR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methionine aminopeptidase 1D, mitochondrial</fullName>
            <ecNumber evidence="2">3.4.11.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">METAP1D_2</name>
        <name evidence="2" type="ORF">MHBO_004970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010006033">
        <property type="protein sequence ID" value="MES1923404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004239">
        <property type="term" value="F:initiator methionyl aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="entry name" value="Creatinase/methionine aminopeptidase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43330">
        <property type="entry name" value="METHIONINE AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43330:SF8">
        <property type="entry name" value="METHIONINE AMINOPEPTIDASE 1D, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="Creatinase/aminopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M24" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7019" checksum="F7215BB0D2233E15" modified="2025-10-08" version="1">MEEGMTFTIEPILTTGDGRTTILKDGWSVSTIDGKPCAQFEDTVLITESGCDNLTEDLNSIDYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX6</accession>
    <name>A0ABV2AUX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">glutaminase</fullName>
            <ecNumber evidence="3">3.5.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004791</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>L-glutamine + H2O = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaminase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.2" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010005280">
        <property type="protein sequence ID" value="MES1923246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="entry name" value="DD-peptidase/beta-lactamase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015868">
        <property type="entry name" value="Glutaminase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12544">
        <property type="entry name" value="GLUTAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12544:SF29">
        <property type="entry name" value="GLUTAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04960">
        <property type="entry name" value="Glutaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="beta-lactamase/transpeptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00049534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11516" checksum="5F05769B256A3B9F" modified="2025-10-08" version="1">MSDRRACMAYMMRECKSFPKDTSISKSLELYSQLLSIQFNTKQMAVLAATLANGGVCPLNKKAVFKMSDVRDCLSLMLSCFLIGVVATKVVQSKTFVFVLLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY2</accession>
    <name>A0ABV2AUY2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006309">
        <property type="protein sequence ID" value="MES1923461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="42"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9427" checksum="E3C082A4F1A48CD5" modified="2025-10-08" version="1">MGGGERMGKGGERMGGGERMRGKEREWKGRGRENGGGGEGRGNGRREGENEREGESMEGKGERMRGKREIMEGKGEKEWEGRGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV35</accession>
    <name>A0ABV2AV35_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005100</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006603">
        <property type="protein sequence ID" value="MES1923517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="8021" checksum="67C69F63AAA29C14" modified="2025-10-08" version="1" fragment="single">NKTISEKDEFYNANPGLADRMHCIVYVVKSVNPNGLLFDEICEKIFKTVGRDYGEQSKYLFSSYMYLKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV43</accession>
    <name>A0ABV2AV43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">40S ribosomal protein S19</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPS19</name>
        <name evidence="4" type="ORF">MHBO_005110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eS19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006650">
        <property type="protein sequence ID" value="MES1923526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001266">
        <property type="entry name" value="Ribosomal_eS19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01090">
        <property type="entry name" value="Ribosomal_S19e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01413">
        <property type="entry name" value="Ribosomal_S19e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="10018" checksum="ACD1658A2CD69F24" modified="2025-10-08" version="1" fragment="single">MKKRMTKKHFKKAARGHLRYLLKQLEKAKLVKKGYSGRRITKAGQRVVDSVAKNIVPEVSPILLAVKEAEEMDGQEIDDVENVEEEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWH4</accession>
    <name>A0ABV2AWH4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DSC E3 ubiquitin ligase complex subunit 3 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005184</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007009">
        <property type="protein sequence ID" value="MES1923588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025390">
        <property type="entry name" value="Dsc3_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13373">
        <property type="entry name" value="Dsc3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="DSC E3 ubiquitin ligase complex subunit 3 C-terminal" evidence="2">
        <location>
            <begin position="4"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="9681" checksum="CFC8CE9BDE7FC874" modified="2025-10-08" version="1">MELGTASDFIFGFALGFFFGIVMILWTWNPASPRFQKFGIMLGVLAHVFINFMEEIGKEKNVDVSQAKEIIDNIQNSSGNSGGETSSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC3</accession>
    <name>A0ABV2AEC3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000081</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17729">
        <property type="entry name" value="BRCT_CTDP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039189">
        <property type="entry name" value="Fcp1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23081">
        <property type="entry name" value="RNA POLYMERASE II CTD PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23081:SF36">
        <property type="entry name" value="RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12738">
        <property type="entry name" value="PTCB-BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00292">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BRCT" evidence="8">
        <location>
            <begin position="24"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="264"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="273"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="33258" checksum="13236C9AC128F6FF" modified="2025-10-08" version="1">MYYKTKKDMSPRIPTDAAKILKLLRKNVLKNVNVVFSGLFPIDETPEKQSIWKLAKMFGARCSDVIDSSVTHLVARNRATEKVNFALSLRKIKVVESAWLFDCTAHFRKVSEKKFALEPSKSSKTKHKYVRNYVSKSVSVKHLCFPFTDSNWGKSKIFKSSDESETSNKLKKRKLESGIFDQKIPKIAKNRNNAKPENETENKFAKHFLAKTNLTEQKNFDQNKFYYKSKNLVDEPFKPKISDIAKFGKNNFGNFSRNVRTNFAKSDFRNPPSAINFSEAKTQKVSKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AED3</accession>
    <name>A0ABV2AED3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2 8">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">RPO41</name>
        <name evidence="10" type="ORF">MHBO_000096</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the phage and mitochondrial RNA polymerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2 8"/>
    <dbReference type="EMBL" id="JBDODL010000012">
        <property type="protein sequence ID" value="MES1918075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.280">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.20">
        <property type="entry name" value="5' to 3' exonuclease, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1320.10">
        <property type="entry name" value="DNA-directed RNA polymerase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046950">
        <property type="entry name" value="DNA-dir_Rpol_C_phage-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002092">
        <property type="entry name" value="DNA-dir_Rpol_phage-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037159">
        <property type="entry name" value="RNA_POL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029262">
        <property type="entry name" value="RPOL_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10102">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10102:SF0">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00940">
        <property type="entry name" value="RNA_pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14700">
        <property type="entry name" value="RPOL_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01311">
        <property type="entry name" value="RPOL_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00900">
        <property type="entry name" value="RNA_POL_PHAGE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00489">
        <property type="entry name" value="RNA_POL_PHAGE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 10" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5 8 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA-directed RNA polymerase N-terminal" evidence="9">
        <location>
            <begin position="160"/>
            <end position="464"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009493"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM01311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="985" mass="115229" checksum="6E1B6CDC5C621BB8" modified="2025-10-08" version="1">MLINKLSKFRKYPELPKLDIVRTKAIFDRRLLASKCAETLNYLFWEHHETYKSELGIEGRVEEDDFIETTGYGSRFLQRNFWYILRSNPDGKLETTNAAKIKKMMENFIGCLTELKLIKDDKDPDYTNKLIDSESCHNMLSEYVFECFSDGYVPDPEKLKLQWLNENDNLRGYTDMMRERLGGSNQIVYDHSQSDQIDKTIAVWFSELSEEIKNLRSGYKSKKYFTKTEARLLLLSPDEITSVFIASFFRCWTISNYKSDKNEYNITLKVIADNFGRNLNMETNRKYVRKRDLITDLIKEGFSERLIKQKIFIESKLSDEPVKENHLEWKETERKSLGDKIFYLFLKSAYIYNDKGQKIPAVKIEKKTMFKNHHKTFHVILANEVVEYLKNSMEFTYKLQNNPFDDPMIVRPRNWISPSDGGFLTTSRNLLRTKALKKEYKKNIESIPKDELQYLLDSINSLQNCSWAVNKKVLAIVNHYFKHGQSISGLPGTFHEKESPKSIEKSLLDSIHKLDSVNLDSRTLNEKLMQNIKKSKEKNYEHSLSFNNYLGLYATCFLKLQTAKRIRNETFYFPYFLDFRGRCYPHSPYFSHVSDDLNRGIIKFAEKKALNKNGWKWLLIHLCNLYGNNKMSNEDRKKWSLNNMHNIMDSADFPLEFDWWRKGDEPWQILACCFEITEAARTGDVSRYKSNLPVYQDGSCNGLQHYSAMGRDMKSAEFVNLTNGDKPKDAYVKVLEIAIRKVKKDMSSENAEKRKMATILNGKLTRKMIKQTVMTTVYGVTVIGARKQIERQLEKSNLKELELDLYKSSLYLATVVLDSVDEIFTSANKIMEWLRHASKQIAKQGKCVSWLTPLKLPAMQHYGIPFEEIKDSFNYQPNVRSQSLAFPPNFVHSLDSTHMLMTAKKCRDDGIEFASVHDSFWTHAADIDKMNKIIRQQFVNLHEQDPLLDVKDQFRIRFPDIKFKPLPQKGALSLKSVLDSKYFFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF05</accession>
    <name>A0ABV2AF05_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000228</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="GLUTATHIONE PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592:SF78">
        <property type="entry name" value="GLUTATHIONE PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="88" mass="10606" checksum="3FFE6121D0D9B0FC" modified="2025-10-08" version="1">MNQEYNDNKEIKAFIKSKNSKLQVFEKSDINGDNSNSVYKWLKRSFPGEITWNFHTKFIIDRSGKPVRRFDKKATWEEIEEEIVKYLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF06</accession>
    <name>A0ABV2AF06_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000066</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000008">
        <property type="protein sequence ID" value="MES1918039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6549" checksum="BF6F47E9EC5ED6A4" modified="2025-10-08" version="1">MQIVKGPLGFATIALNFFSASRMSCCLIKLSLLIRLIVIVSVLGKDSITSVTRRYQYLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF43</accession>
    <name>A0ABV2AF43_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">tRNA (adenine(58)-N(1))-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.220</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">TRMT61A</name>
        <name evidence="10" type="ORF">MHBO_000284</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.220" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030731">
        <property type="term" value="F:guanidinoacetate N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049470">
        <property type="entry name" value="TRM61_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014816">
        <property type="entry name" value="tRNA_MeTrfase_Gcd14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12133">
        <property type="entry name" value="TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12133:SF2">
        <property type="entry name" value="TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE CATALYTIC SUBUNIT TRMT61A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08704">
        <property type="entry name" value="GCD14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51620">
        <property type="entry name" value="SAM_TRM61"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 C-terminal" evidence="9">
        <location>
            <begin position="42"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="7"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="24619" checksum="FE0BF0B3EC6EC130" modified="2025-10-08" version="1">MGRRSGEQSVDLAQSSELQNPNLVHHRHRLHCSATRRQNGPVRRGSRDREWGAVALSVDVRLLTNRAVAPDGHLFTFDVDKERILRAREEFAANGVGDFVSAVHRDVCKDGFPSLDQLREIENGSKLILAPRIDSVFLDLPSPWEAVKSGSSVLRKGGRMCSFSPCVEQAQKSICEMRKWSLSVTKTLSVVDTNFSCGKEFNRIFGDEVVHSGFLTLAIKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFD1</accession>
    <name>A0ABV2AFD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000367</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000055">
        <property type="protein sequence ID" value="MES1918396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16105" checksum="CB1DBC7239800366" modified="2025-10-08" version="1">MRFCFEGEFQGSVDDKIVVFGTFKNRSEWLLTKIGSNSDSSFLSAFMGRGDFCADSNEFYKTKMVFVCYDQLMFGRAFKILDVQFEGCSGVVTIGSSNLCKHPFFTPNTNYDEIICFHRSFADENVFGAAKELKKVEFVEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU5</accession>
    <name>A0ABV2AFU5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Steroid 5-alpha reductase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000079">
        <property type="protein sequence ID" value="MES1918537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1630">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010721">
        <property type="entry name" value="UstE-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32251">
        <property type="entry name" value="3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32251:SF23">
        <property type="entry name" value="3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE (DUF1295)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06966">
        <property type="entry name" value="DUF1295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="301" mass="35860" checksum="DC0004B59A6FC079" modified="2025-10-08" version="1">MHLFYAIIRESFSTENAFRFFASQMSNLTRFIQAPFDRVLKFAGIVAFVVWALSLVTDNYTFMDRLWPILPAVYSWIIVDPFPPDLSDPRLVLMAAVLTFWGLRLFAYFYIKGVYNFSAYDDYRWISIKNGMSPMRFQLFNLFFIAIFQNILLVLMILPVHYVSINRESDPLNFFDCIICLSILLSVIGEGAADWQQWNFQQKKKKDKKLDFISTGLFRFCRHPNYFCDIMVYLLLYFFSIKNESNWINWSLVGIVVYVLVFQKSIQITEELALKKYPRYKIYKTETWKLIPKLFWKSHQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV6</accession>
    <name>A0ABV2AFV6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Small ribosomal subunit protein uS10 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000526</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000087">
        <property type="protein sequence ID" value="MES1918575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.600">
        <property type="entry name" value="Ribosomal protein S10 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00508">
        <property type="entry name" value="Ribosomal_uS10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001848">
        <property type="entry name" value="Ribosomal_uS10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027486">
        <property type="entry name" value="Ribosomal_uS10_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036838">
        <property type="entry name" value="Ribosomal_uS10_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11700">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00338">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00971">
        <property type="entry name" value="RIBOSOMALS10"/>
    </dbReference>
    <dbReference type="SMART" id="SM01403">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54999">
        <property type="entry name" value="Ribosomal protein S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS10" evidence="5">
        <location>
            <begin position="29"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14585" checksum="6860A5F360D0A2DA" modified="2025-10-08" version="1">MSAAKPTKTTAMGSSKKADTEVQKLHNVRIKLTSNNKKNIEKTCSRLKENALRFDAKNIRGPKRFPIKNLKIVTRKSPCGEGTNTWDNFQMRIYKRILDFQATSDIVIKVTDFEMADGVNFDLTMKCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX8</accession>
    <name>A0ABV2AFX8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000167</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="19675" checksum="294598C9919CD4F1" modified="2025-10-08" version="1">MSKGERNKKEQIGKIKSSSGESYYPLLLRSNAKTNESKNLDFPAAQTFSSFSNELFLTSGSFAAASPRLASPAQDRGAREKAKRLSERANESRNQLDFLEVGGQDEKYEAEDCFSKIPKAFFEKDFDISKNETALGLLEKKGFDGRFEDFVGFLGKVDVFYFYFRFVCLTRFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG39</accession>
    <name>A0ABV2AG39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000599</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000103">
        <property type="protein sequence ID" value="MES1918665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6265" checksum="C499F082A4029C60" modified="2025-10-08" version="1">MKKLSETIESTKEEINFQLKQSLNLNEKVLASQNTAKIGMNELNEKQHIVKFVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGC6</accession>
    <name>A0ABV2AGC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000654</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000115">
        <property type="protein sequence ID" value="MES1918738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10790" checksum="BD07B61249ED4186" modified="2025-10-08" version="1">MGIIFGKKEDKDNTTTREGARNGLKFAISQGVKFLKMNSDKLCHRDLDDLTVLLENTQEWYKNSDLKKNTTSEYKSHAKELNELVDNLDIQIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM9</accession>
    <name>A0ABV2AGM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ATPase of 26S proteasome regulatory subunit 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">RPT2</name>
        <name evidence="8" type="ORF">MHBO_000726</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000134">
        <property type="protein sequence ID" value="MES1918826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050221">
        <property type="entry name" value="26S_Proteasome_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032501">
        <property type="entry name" value="Prot_ATP_ID_OB_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23073">
        <property type="entry name" value="26S PROTEASOME REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16450">
        <property type="entry name" value="Prot_ATP_ID_OB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 8" id="KW-0647">Proteasome</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="7">
        <location>
            <begin position="216"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="438" mass="48686" checksum="B8117FA919336E92" modified="2025-10-08" version="1">MGNNPSGNANDQEKKYEKPKTTINFGRKKTRYKGGDSSLLKLPEILPLTKCRLRELRLERVKDYLIIQRAYAEKQEKLLREREGGQNDRTAQLRKQVEDMRGASITLGTLEELVDDGHAIVSSNVGLKYYVNILSFVDRDLVEPGCSVLLHSKALSVVGVLQGRTDPLVSVMKVDKAPLESYSDVGGLEQQMQEVKEAVELPMTHPELYDDIGISPPKGVIFYGLPGTGKTLLAKAVANETSATFLHMVGSELVQKYLGDGPKLVRELFKAAEENAPAIVFIDEIDAIGVKRYSSQSSGTREVQRTMLELLNQLDGFDSRGEVKVIMATNRIDSLDPALLRPGRIDRKIEFGLPDAATRRKIFSIHTARMTFASDVDLEPFVAAKEDLSGADIKAICTEAGLLALRERRMQVSQEDFSKAKENVLSRKKSGFAERLYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH39</accession>
    <name>A0ABV2AH39_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cyclic nucleotide-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000861</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000170">
        <property type="protein sequence ID" value="MES1918977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23011">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23011:SF28">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="cAMP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="8"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14222" checksum="6C12C2BA964ADAFB" modified="2025-10-08" version="1">MEQIIKKENLNNETINSLVKICRLKKYSPKIVISKQGDIIEKFRLIKKGTVSVSYKSSQINVGGDIKLGNLKELDYFGELSLVSGQRCVATIVTESEVECMEFEFDDLKDIIGSSYSSILIGLLILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH61</accession>
    <name>A0ABV2AH61_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Methyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000177">
        <property type="protein sequence ID" value="MES1919006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43861:SF1">
        <property type="entry name" value="TRANS-ACONITATE 2-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43861">
        <property type="entry name" value="TRANS-ACONITATE 2-METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13489">
        <property type="entry name" value="Methyltransf_23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="221" mass="25701" checksum="9D8BB9F734CEF377" modified="2025-10-08" version="1">MHNKNSICSDYWNDFYSKNIAPETPTDFSKYITKKYLTRPNKILDIGCGNGRDSAYFSMLGHKVFCLEPAQTAKLEMLCELYDMALFKVFLIKRKITISEMDNVLKSERFDSIYSRFSLHSVSSDDQNRLLDYCKDHLNRNGRLFIEVRSTEDALYGQGKKVEEEKNAFMTDHYRRFVDQDELLQALRKRGYCIVESVKGKGLAVKGNEDPIVIRVIAYIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH89</accession>
    <name>A0ABV2AH89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000096">
        <property type="protein sequence ID" value="MES1918622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="110"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="20137" checksum="6381DE70B8824882" modified="2025-10-08" version="1">MAEHLGIAENAFAKDKKSLKRLENLKSENAKKETLFKTELFNAKADLDAFERTNKEKKRSDKLTEKQRNEYDRLHLQFEIKAKVGLTEMDILDENLARETVIFFKKQETCASLKEKIDLLKKREEETEKGIRENLENLNELRKSKKTTDLELKENLSKETETKTILSQKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ3</accession>
    <name>A0ABV2AHQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000225">
        <property type="protein sequence ID" value="MES1919202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.390.10">
        <property type="entry name" value="Neutral Protease Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027268">
        <property type="entry name" value="Peptidase_M4/M1_CTD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037813">
        <property type="entry name" value="TAF2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15137">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15137:SF9">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55486">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="506" mass="59658" checksum="FCC062E8FAFBBA54" modified="2025-10-08" version="1">MSGFLIEEQKLEIRTFDNSIRFNSWMRLKSKTAKTEKDQNSIRLNFSNKSIKIEKIFVNKTFLNNKNDYKILNNKKILAKTQLQNFAEVQKAFTKILEKRKEGNLLINIPKSDCNLAQIELDIVYSINLAKCKNDVGLKVEPKPNFQILSYNSNWIPKIENEKSMKKFCLNFSCDDENIVVFNGEKTAQKRKAKKMTNFSFSSNFNNNFDYNKIRFVCGDFEQYFFVHEKTEFLFVYPKNKSINPESFKFVKRAIAVYEDFLCTEYPFDRQYFCFVDKSVNPITNCHKLIVLDSKYLYSEKDIDLVFSSRKNIALAIAKNWCQKIFPPSSDQWISLALSEYLRSLFIADEFGPNFCEYRKFSSRFDWKNDYVHHSLSNSNKTKLSNFDKNLEKRIRKKGFLILSLIEIIIGKTEFKSFFKGLALSNEIVKTEKFEQNLISKVPSRQIKDVFDNYIYNNNVPVYMVDISFDSRKRVVGLKMENVSKNVLQKDFSFSKVLKIFKNDKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI24</accession>
    <name>A0ABV2AI24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Polycomb group RING finger protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">PCGF3</name>
        <name evidence="8" type="ORF">MHBO_001172</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000255">
        <property type="protein sequence ID" value="MES1919320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051507">
        <property type="entry name" value="PcG_RING_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018957">
        <property type="entry name" value="Znf_C3HC4_RING-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45893">
        <property type="entry name" value="POLYCOMB GROUP RING FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00097">
        <property type="entry name" value="zf-C3HC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="37"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="26446" checksum="3C0F6C1DED46AA24" modified="2025-10-08" version="1">MAEQMEICDDSNPQFEPIVKNGRLSFDIDYLNGVISCMICNGYFDDAHTISFCLHSFCKACIKKYLKNNKSQCPRCHFELPPNPMKSKIVQDTQMQNLVDALLTNIKKQSNKKIKESNAKVLSAENFLKKDNLINFCLNFITPAKSEKHLVDEKKLENPFICAQSNITMRIIRKYLASKFDVDFEKIDLFLGKEKLGDEWNLYFLKKTKWEKSKNLDYQIDFAIKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI86</accession>
    <name>A0ABV2AI86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA polymerase alpha catalytic subunit</fullName>
            <ecNumber evidence="2">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">POLA1_1</name>
        <name evidence="2" type="ORF">MHBO_001239</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000278">
        <property type="protein sequence ID" value="MES1919401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.730">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="28"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16448" checksum="C01CA6EB785317D6" modified="2025-10-08" version="1">MPEIKSGQIKEIDNHFEEIAKKFPQDKNNLNTNSNQNVVKSDNLNEFKSEKHDETKINEFPKTDNSVSFVKTHASFEENKIEEQECSDENIRENEIKNDPVQNTLKKLENLKDCLIMYWIDAFEDFYTRPGTIFLFGKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AID4</accession>
    <name>A0ABV2AID4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase</fullName>
            <ecNumber evidence="6">4.1.1.130</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Coenzyme Q biosynthesis protein 4 homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">COQ4</name>
        <name evidence="7" type="ORF">MHBO_000997</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Lyase that catalyzes the C1-decarboxylation of 4-hydroxy-3-methoxy-5-(all-trans-polyprenyl)benzoic acid into 2-methoxy-6-(all-trans-polyprenyl)phenol during ubiquinone biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 4-hydroxy-3-methoxy-5-(all-trans-polyprenyl)benzoate + H(+) = a 2-methoxy-6-(all-trans-polyprenyl)phenol + CO2</text>
            <dbReference type="Rhea" id="RHEA:81179"/>
            <dbReference type="Rhea" id="RHEA-COMP:9551"/>
            <dbReference type="Rhea" id="RHEA-COMP:10931"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:62731"/>
            <dbReference type="ChEBI" id="CHEBI:84443"/>
            <dbReference type="EC" id="4.1.1.130"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of a multi-subunit COQ enzyme complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Mitochondrion inner membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
            <orientation evidence="6">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the COQ4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.130" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000207">
        <property type="protein sequence ID" value="MES1919133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03111">
        <property type="entry name" value="Coq4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007715">
        <property type="entry name" value="Coq4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027540">
        <property type="entry name" value="Coq4_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12922">
        <property type="entry name" value="UBIQUINONE BIOSYNTHESIS PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12922:SF7">
        <property type="entry name" value="UBIQUINONE BIOSYNTHESIS PROTEIN COQ4 HOMOLOG, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05019">
        <property type="entry name" value="Coq4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="2 6" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0830">Ubiquinone</keyword>
    <keyword evidence="1 6" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="27998" checksum="9B9B2727B71BFF0D" modified="2025-10-08" version="1">MPLIYAKHNTQNPKKALAQMISRTPLSNTNLKCWQKALMITGSGILSLANPYRDDLVAALGELTGERALTAIRNKMLKNPTGRAILKEKPKITYKSIDFEMLRNLPKNSFGKVYSDYMTEHGISPDSRKAVKYIKDPELAFVAQRHREVHDFLHVLFGAPTNTFGELALKLFEYLSTGLPMAGAAALFGPLRMSLADNANFFGVAVPWAFYAAQNAVDLMCVRVEDQFEKDFKVLLGELRIVDFPKNLKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH6</accession>
    <name>A0ABV2AIH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001306</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000304">
        <property type="protein sequence ID" value="MES1919481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="12939" checksum="CA989F80802554A2" modified="2025-10-08" version="1">MKFIYPRIITTQRALKITTFIKKQHRALILFAVAAALIVTTIVINHVGDIDKEIVSKITTGFVASGFVIGVVAIFCCVAYIDRGEATTSNLNRFSDEDLATHGSTSPAENIQTILVHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ2</accession>
    <name>A0ABV2AIJ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phosducin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001326</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000311">
        <property type="protein sequence ID" value="MES1919506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051499">
        <property type="entry name" value="Phosducin-like_reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46052">
        <property type="entry name" value="PHOSDUCIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46052:SF1">
        <property type="entry name" value="PHOSDUCIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="189" mass="22146" checksum="4924395DDA9F9D3C" modified="2025-10-08" version="1">MSKNYSSSNTGPKGVKSDYKKFVTKEEQKRKDENKKLFDLLENKPKFVTKLSQKNEQIFINSKRSFGKIFFFQNAKNFVEIVHKDPHSFTLLHLYQNNLEECEKLTKVLSKVSETLTKLRICCIEWHLLLQNIEPKSLPILILFKGDRILKKHEDFDLGLKFDSEDFIDFLENSFFGETAEVGVEDLTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP7</accession>
    <name>A0ABV2AIP7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 4L</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005291</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000309">
        <property type="protein sequence ID" value="MES1919497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="61" mass="7013" checksum="61688AAEAEA38DD3" modified="2025-10-08" version="1">MSRFLIFVTVFSNKSGKFESISLSSSFKILSLVVFSFVFESLSIIFIILIISLLLYFLYCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP8</accession>
    <name>A0ABV2AIP8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">FAD assembly factor SdhE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001359</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000322">
        <property type="protein sequence ID" value="MES1919547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.250">
        <property type="entry name" value="Flavinator of succinate dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005631">
        <property type="entry name" value="SDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036714">
        <property type="entry name" value="SDH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03937">
        <property type="entry name" value="Sdh5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109910">
        <property type="entry name" value="YgfY-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="117" mass="14024" checksum="DD6011D3CA4A1175" modified="2025-10-08" version="1">MNNKTIKLLNKVPKFSLEKYRKIILFKASQRGLRELDLILMNYIKNANLDKQKLFKMENLMNGYESIDLLSFILKKEEPPTDLKENDLFKEIIKFTENKKIFRSHSFLVITKNKKNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ22</accession>
    <name>A0ABV2AJ22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Exportin-5 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001473</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000366">
        <property type="protein sequence ID" value="MES1919686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045478">
        <property type="entry name" value="Exportin-5_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19273">
        <property type="entry name" value="Exportin-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exportin-5 C-terminal" evidence="1">
        <location>
            <begin position="139"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="506" mass="57924" checksum="A36C12ED47FD257C" modified="2025-10-08" version="1">MILETFKDAGKKLSTPQITSYFNADNIILLLRPGETEWKTRQIIRVSLNTINALLRGVTKARVSYSNEYRLNYIPVLLVNSFQYDEVWNLAAAAVPFVSALCRALGGLYGDAASKADSDLATILRKPFFVTELLQRTENDSARHMRIRHVSAWINDMRDLCYTMLSLSSNLSDSFFTANPHFITEEVFYNIDKISLGNLKSIGDKLISTLVIRCAASLPQNLDSFLTPILGVFLHQATMRLGNAWQNHSDNLQKRSSQEDLSEEMGLQEELRIFTRGMSKLLYSFSLEISLQRIFERSKPRGIRSDRKEQFRINKILINYLFKSQKVCEPLLTLLSFFLRCPDSIARNNVHRFLLQATRIMCDQREYLETFAKLMVEAIKVQSEIREVDDNLIDFICLLIRLLRKTRRQLPQEVIAAGVPSIPSEDVDFLLNAFASKDTVLHRKKTKQFLLKLSGEEGIELYFERSGMHVNSVRRRTKRGGIAREKTTSFVDPVNLGLLFEGADSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ89</accession>
    <name>A0ABV2AJ89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000388">
        <property type="protein sequence ID" value="MES1919750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="479"/>
            <end position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="541" mass="61286" checksum="70169534483939AC" modified="2025-10-08" version="1">MLMIPTDVCSIYLNSYFFGSCVFKVNLPARFVNQNTLVGQTTWICSQDGNLTQKFNLTVGCNDDFVAKNSMELGDGCTDLEPYIFGHCDMCAQNIKFRKSKGSSELANSFKYACNDGNDNSGDIYPVKGCREYTTPIFTQNALQISDDCITDSDYFFMKCMFIDMPGFMSKVGERDYIPFFPSECTEEGRPIPPNAGTVWKGCLRPSVNLPGILEYVDCNFFDNWYYGECSTRTSKNYVITKNNKLSKMLKITCPRTGVPTDENISILPWCVFPSFASHVGALIADECRVLDNGFAQACKVVPKDHYRFLFRDKVVDSVMLDCDENYDPDNYSVDVQESCLKPKQTSQDALNYSKCSEDGDERFFADCTVQAIAGYFIEIENRFSYSQRLQCGQQGASLTGAQLRDLNRVPDMIFVFRITHRCNLHSIDDGEIVSGCIMNGPCMYRCDVLYVSHSNERGGETFCLHEGFLVPPQCVKSAMYYVLVIGVPFLVVVLSIGASVWYMHWKRIWFFSETATEKIFTEDNKMVSLKSNTFEILEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJD0</accession>
    <name>A0ABV2AJD0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">60S ribosomal protein L17</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPL17</name>
        <name evidence="6" type="ORF">MHBO_001400</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL22 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000336">
        <property type="protein sequence ID" value="MES1919599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00336">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.10">
        <property type="entry name" value="Ribosomal protein L22/L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001063">
        <property type="entry name" value="Ribosomal_uL22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005721">
        <property type="entry name" value="Ribosomal_uL22_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036394">
        <property type="entry name" value="Ribosomal_uL22_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01038">
        <property type="entry name" value="uL22_arch_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11593">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11593:SF10">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00237">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54843">
        <property type="entry name" value="Ribosomal protein L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20007" checksum="60A1B89C2E1DC322" modified="2025-10-08" version="1">MVRYSAQPEDPEKSCKVRGNNLKVHYKNTRETVQAIRKKTITEAIRYLNDVIEHKDIVPFRRHNGGVGRHAQAKKYKTSQGRWPQKSCKIIKNLLSQLTDNGHKINLSPDALVISHAQVNRAAKRRRRTYRAHGRINPYMGNPCHIELMASIKPEPVAAGEGKKAAPKKNLKSGDTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK18</accession>
    <name>A0ABV2AK18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001757</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000483">
        <property type="protein sequence ID" value="MES1920028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="9838" checksum="19B0E5DCCDD52BA4" modified="2025-10-08" version="1">MENGLNQNGSENLRFVSPYEQMLLEQESQKPAQNNVTQFTPNANNTEFVHPFPEKMVPPSSPHYPKTSNPTSSHFVTPKDQFGFGNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB4</accession>
    <name>A0ABV2AKB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Zinc transporter ZIP11</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Solute carrier family 39 member 11</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Zrt- and Irt-like protein 11</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_001832</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ZIP transporter (TC 2.A.5) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000518">
        <property type="protein sequence ID" value="MES1920116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003689">
        <property type="entry name" value="ZIP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11040:SF211">
        <property type="entry name" value="ZINC TRANSPORTER ZIP11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11040">
        <property type="entry name" value="ZINC/IRON TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02535">
        <property type="entry name" value="Zip"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="244"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="274"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="305"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="119"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="119"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00040593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00042540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00042973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1920116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="35158" checksum="0867D8CCF2FA4938" modified="2025-10-08" version="1">MDQIVLFGLLGTLLTWGVTAAGAALVFVFSAISEKVLNALFAMAAGVMIASSCFGLIEPALETAEESFGSFRWAPVVAGILVAYVFFVGLDTLLHRFLKESNQTDLFLEIDSALETKKNRQRKKKDEKIDGKVKKNGGKNILRNRNPGKSNIEKTAKMGTNGEKNITNKIILILSAITAHNLPEGLAVGIAFGSIRSCANDECVDKLFKNAVVLTLGIALQNFPEGIAVAFPLRKCGMSPFKSFWYGQMSAVVEPIGALLGAVLTLQMKNLQPYFLSFAAGAMLFVTVSEMIPEAFSSNSKSSKMANNFAFVGGFALMMVLEGVFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH2</accession>
    <name>A0ABV2AKH2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000533">
        <property type="protein sequence ID" value="MES1920158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051218">
        <property type="entry name" value="Sec_MonoDiacylglyc_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45856">
        <property type="entry name" value="ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45856:SF11">
        <property type="entry name" value="FUNGAL LIPASE-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="Fungal lipase-type" evidence="2">
        <location>
            <begin position="144"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="374" mass="42769" checksum="C5F48C12C758398A" modified="2025-10-08" version="1" fragment="single">RFFVTQSYFVLLYIIFVWLIWYISGDKLFNSNKNPLSGLGTNLILSSFTIVCAFVHLPLREKDLSQYSIYRNEYEDSGFSLKVARLMCHLSWQAYGIPKGIETDNPNEYPVNLEDSSLNLYEIGQSKDYDVQWLIAEGKGIVTVAFRGSISFVNVTTNLRIYHRLVNNNFWYTGDLRFISPSQQKMQHGSTMVHAGFLQSYLVVRKSVFKFLNALARDKNKETIFYFTGHSLGAALATLCCLETRCRMGCDVRLYTFGSPRVGCSSFSNLFRALIPKNDCFRIVFERDIVTAYPTELASYRHVDSEVYMNRAGNIIFAPNVVEKSLMPSKTSIEDHLLANYRKAIDMACLQLNIEKTKKIDFIEEAEIGQSDGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN8</accession>
    <name>A0ABV2AKN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">von Willebrand factor (VWF) type A domain</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">COL6A5</name>
        <name evidence="2" type="ORF">MHBO_001932</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000566">
        <property type="protein sequence ID" value="MES1920241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="15472" checksum="213EAF61451530DF" modified="2025-10-08" version="1">MAVAIAKDINVIFYYEDYTNVDDINKAIQSLRETELIGGTKIGGCMDLVYSKKRPNDLITVLLVVTDGNPLEDTVEIDEISVKMRENGFFIQTAGFGDVNYKTLEIITGNIETIIHNKDVSELEKQSEILTKTICNCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS6</accession>
    <name>A0ABV2AKS6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PITH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000577">
        <property type="protein sequence ID" value="MES1920267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="187" mass="21468" checksum="728843FC05A02183" modified="2025-10-08" version="1" fragment="single">MCNGSIHCGSQYEIEKRFFERLDLSLKKDYEKDYSLNNIFEYNNFDTQKLVFPFTENDICKCAGLKPSICLRKSNFCDKNTLNLVIVFVGGNINEDIDRIVNVVNNNNKECEKNIKLERILEDYITGASNPDATNIIFVGRPKTINFEGKLPSNLHFVVEGNLNNLLSSSLNIVDNLYLSFYNNDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKV4</accession>
    <name>A0ABV2AKV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001976</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000590">
        <property type="protein sequence ID" value="MES1920290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="336"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="101"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="341"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="368" mass="40764" checksum="CC93F27FB6DABB62" modified="2025-10-08" version="1" fragment="single">MNQKGLPKQREIWSEIGCTEEKSENSGFFGNTEKAEDFSFSNFNQEKFDDLFSEQNSSFDLKYNVFQSKTEDSKKSETNSRKDDVKKTDDGNEENDANRNGFDSVSDNANNESTDEKKSTTGLDLELPLDPPKKPQNMANSPNPVSNLGSNIINSNNVLINTTNPTSPISDSALHIGVNGTDSLLKNFGFNGMGQYDYSENGRIRADFGDGRFSLHENGASWPPSSFMGNGISYSAQNGEQQGYLSPSAQSDHFNGIMGYSSFDFAPSPNSASAQYGSQMDYYLPNDNKAETQKMSKEKSLSEQQLKMLQSVKMMQQNQLRSNEYLNHFDSAMTNPPISPMSPISPISPIVDSSFGNPRNCKINQNKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKZ5</accession>
    <name>A0ABV2AKZ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein TIC 214</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002043</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000632">
        <property type="protein sequence ID" value="MES1920366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="191" mass="23302" checksum="7F92CAB6AED313F6" modified="2025-10-08" version="1" fragment="single">MLKEKHQRYLEKKMSMPRRFFYGSKSCEKTIIKLRIQENLLKRKIIDLCRYHKTQIENINFLLCEFHEIKMPRLMRKQNKIVLKTEKMLETIFYKFTELEDERSNFNKSITAFFKTKYFNEKLKRQSKRKNDAIFCLESFGNFNPKKYEIEYQMPKTTKEVRKSTPKIPDWGRFILMDKAPQVLQLDTESS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL18</accession>
    <name>A0ABV2AL18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002053</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000638">
        <property type="protein sequence ID" value="MES1920376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="17231" checksum="73C3A0AAE58EC213" modified="2025-10-08" version="1">MVEDFGGKINLVWYNKVSLNAHLYPWKSEFITRTNGIPHNRYRQKYPDLFKTDDSWKTDERLKNTTFEERKRIMAENGTNERIMEKLAQPPNVETKDGLFFRLKKKKFYNRKKKQLPAIHHSVKTDPEKMALLEMRCKVKIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL84</accession>
    <name>A0ABV2AL84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Unconventional myosin-XVI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">MYO16_1</name>
        <name evidence="6" type="ORF">MHBO_002101</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000668">
        <property type="protein sequence ID" value="MES1920433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.720">
        <property type="entry name" value="Myosin VI head, motor domain, U50 subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051724">
        <property type="entry name" value="Actin_motor_Myosin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46049">
        <property type="entry name" value="AGAP003327-PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46049:SF5">
        <property type="entry name" value="PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY H MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2" id="KW-0505">Motor protein</keyword>
    <keyword evidence="1 3" id="KW-0518">Myosin</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myosin motor" evidence="5">
        <location>
            <begin position="1"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Actin-binding" evidence="3">
        <location>
            <begin position="25"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="216"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="573"/>
            <end position="594"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="579"/>
            <end position="594"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="655"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="655" mass="78883" checksum="1DC4F05EC345BCA7" modified="2025-10-08" version="1" fragment="single">KEIFSEKKKKGGSTNNIGFVFTKELDSLIKTLKKTSNFFVRCVNPNKNKSSTEFDIKHVTKQLRSGGLVQVLKVIKLGYPTRAKYETLKNYKTKIATHPILEDLTEKDYWRAILAAFNTDTDKFTFGLTKIFFKPNINFIASIKNFDGNLTEEMIAKIRTLFVRQRLQKIKGLIFTYFRVAAKVDTKKILRLFSSAVVTNTAIKTSLTTVREKIRKEKEEAEKERKRQEQLRLEQERREKQIEEEKRRAEEMAINQQRLLEEKEQRMREEEKKAQELQQKKIEEIREKERLIQLKEKEEILRIEEKQKRKMEEMKENLAKKREEEYAEMTRIKEEFESEHEEQKKRKREEIEALEKKIVVLKEEAQVVFAKTAEEKENQIEKEREYEKKVREKLEREREEALKKIFEESKQKSDEMSTKLSQIEQQKRDEIEHLFAENEKHMERRKEEIDLYEKESKKRIKLFSEENIEHFEQMKKFSQENQNKMKLMLDEKTEQIEIKNKELEKLKTDQEKEHQEKMEEISFLREKEMSDLKHFKEITENELEYKKRELENEKDNAIKLEKMFKEQLEELAKKKKSLRSKESRLKRKELSNKSRSLEKYQKELLATKNFCEEKSSIIEKTNLILAEFCDSESILLSLKTKSRKDMDESVSEALN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK4</accession>
    <name>A0ABV2ALK4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002168</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC34A transporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000708">
        <property type="protein sequence ID" value="MES1920502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003841">
        <property type="entry name" value="Na/Pi_transpt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF037997">
        <property type="entry name" value="Na_Pi_symport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010:SF46">
        <property type="entry name" value="SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02690">
        <property type="entry name" value="Na_Pi_cotrans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="134"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="176"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="314"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="354"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="385"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="413" mass="45523" checksum="5645F1C2BF915F20" modified="2025-10-08" version="1">MEIRNSIMASFKSETSKSSTFINLGEKDLKAKFLKEKTWRELSHKERLRKVGKVALIAIAFFLLLILFFANISMMSAGIKIISGYHTRNIFEFANNEMAGLSIGIIATVIFQSSSTTTSLTVALVASNVLTVKYAIPIIMGANVGTSVTNTLVSLGHINDATQFRRAMQGATVHDFFNIFLVLIFLPTQMIPIYDGKGWMELLSYYLVMPLPKNSNSDTTKKLNFIKHMTEPYVNSFLKINKCLLKLANIEGTNLDQSNFFQRCIANCASKLCPSDFDPSQSNIPISKCPRCSYYFKSLIESGILKSSKISDSASAGIAIAISLILIISSLFALTKLMSFALKKQTSNWIKRALLKNVVVGMLVGCVITIIIQSSSITTSSLVPLVALNVITVQQMFPVTLGALIFYIVSSTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR6</accession>
    <name>A0ABV2ALR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002263</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000762">
        <property type="protein sequence ID" value="MES1920612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="226"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="30857" checksum="F4453D7F3C6D7538" modified="2025-10-08" version="1">MKILLLFAVVLSETYKRRQDVKFVTKIDVNYVQCFSELSPKTVETEVHETLAYTSKYLSNSVDISFKTDFKVLSRKDAEKIDQKFCEDECSVESAKKFLENRKIVPKNSETALSIFAIPCQLKTTNSTVTTMTIQQNFEYAVSTGKVCENTSFVAFNIIPDAKFPVALEILRSFGLSDSTYYKMKSYLYTNDKLKDLDISAAKEFRDAVLSQAVKTNSCIIMFSKISAMMIFLSVIVVAGFLVLSIGLCFYLRAPKKKKEDEEIDEELLGSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AME1</accession>
    <name>A0ABV2AME1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002474</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000907">
        <property type="protein sequence ID" value="MES1920850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12392" checksum="1D4E42013FFC22E0" modified="2025-10-08" version="1" fragment="single">LEAIKIVTTTDKIKFYGKEKFTEMTIKSLLQESDFSTSKLVSKNSDFIAFSQNNSLFRPLNFKYDIRRQFIWYLSTLENSLNMIIHFNSVILRSLLKMSLDSVYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND6</accession>
    <name>A0ABV2AND6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">acylphosphatase</fullName>
            <ecNumber evidence="2 5">3.6.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002758</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4 5">
            <text>an acyl phosphate + H2O = a carboxylate + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29067"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="EC" id="3.6.1.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the acylphosphatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.7" evidence="2 5"/>
    <dbReference type="EMBL" id="JBDODL010001140">
        <property type="protein sequence ID" value="MES1921191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020456">
        <property type="entry name" value="Acylphosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001792">
        <property type="entry name" value="Acylphosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036046">
        <property type="entry name" value="Acylphosphatase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017968">
        <property type="entry name" value="Acylphosphatase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10029">
        <property type="entry name" value="ACYLPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10029:SF3">
        <property type="entry name" value="ACYLPHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00708">
        <property type="entry name" value="Acylphosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00112">
        <property type="entry name" value="ACYLPHPHTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54975">
        <property type="entry name" value="Acylphosphatase/BLUF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00151">
        <property type="entry name" value="ACYLPHOSPHATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51160">
        <property type="entry name" value="ACYLPHOSPHATASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acylphosphatase-like" evidence="7">
        <location>
            <begin position="4"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="19"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00047645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12571" checksum="E8D061906405A3D4" modified="2025-10-08" version="1">MCLHIHFRVFGKVQKVFFRKSTVEKARSLEIVGYVRNLKDGSVQGEAFGKENEISIFKNWLENEGSPDSKIERVCYEFCRKVDGKYKFDQFYLRKINGQGQIRDIVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI6</accession>
    <name>A0ABV2ANI6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Elongation factor-like GTPase 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">EFTUD1</name>
        <name evidence="1" type="ORF">MHBO_002664</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001063">
        <property type="protein sequence ID" value="MES1921069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908:SF3">
        <property type="entry name" value="ELONGATION FACTOR-LIKE GTPASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908">
        <property type="entry name" value="TRANSLATION ELONGATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="30024" checksum="53CF4B0DF8A22664" modified="2025-10-08" version="1" fragment="single">FIIDESKSNVLVLNSNSLNFYKEKTKLYEPSYNDKRTSTEKVVETTKSNFGSILTSIFRNSFELLCNNGPICKETMVGIELEIKQIQIKNFDFDKIKKIEETENRQRMVSILLKSYYEYLRDKGLRLLQPFYNVVLLSVASELNKLNYVIEHNGGEIIKKVQKQLIFEVHCIVPVYQHAIFVKDLLRKTGGKTIPQVSFSKITMRLIDEDPFLNLLPRQINDEDESVQNKRILQIVNGVRSFKGMKIIEEKQEDDSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM3</accession>
    <name>A0ABV2ANM3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002800</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001182">
        <property type="protein sequence ID" value="MES1921243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051834">
        <property type="entry name" value="RING_finger_E3_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931:SF3">
        <property type="entry name" value="RING ZINC FINGER-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931">
        <property type="entry name" value="SI:CH211-59O9.10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="346"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="391" mass="44876" checksum="6823B7491DF3648E" modified="2025-10-08" version="1" fragment="single">DGKVKCQRCNLNLTDFKKDGKNDLRYISFGLSKNSNFLKIAIINDGHIDQNSIDTENLKATIVSQLTDQSSRHLTKNEIIRQKNRPILKIVASSPPKGLLKDETVVKLETSGNSLSLLGGGEARKVVLRPTFSTISHNLRRISQIGIKRDLHKRKEELHLAKDDSLVLKGMEFVISEVEPREGGFLSRRTQISIESTVPDLEKAHLLPFEETLPEDQRSASGQFIGEEFIITNYLRRHFLHRRRLLRENEFVTIEGAVFMVVAAEPAQGVVTCETKFFAEGNFLSLRNVRRIFNSILITFANLFTLFQDSESASTRRPTIHFNLMFQERTLTSEDVQRTKENDERCTICLEEYEENDVIMTLPCFHCYHSECINTWLNRDRTCPVCKHSVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP24</accession>
    <name>A0ABV2AP24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002964</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001345">
        <property type="protein sequence ID" value="MES1921433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15303" checksum="E8C801C378C56CB3" modified="2025-10-08" version="1">MTSNNNENKKNIDIEKNKNKVKPIDIRKDPNRAHSGPSWPLAIFLFILFLIGFYAFSVGFTAGLYYSVFVMRKPILVFLGAVFLLFLVFVLFFVFYETFRHKVTNVHVDRISSIKGSVTISEIEHKTEHMLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP51</accession>
    <name>A0ABV2AP51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Condensin complex subunit 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">BRN1</name>
        <name evidence="12" type="ORF">MHBO_002988</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CND2 (condensin subunit 2) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001363">
        <property type="protein sequence ID" value="MES1921454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022816">
        <property type="entry name" value="Condensin_barren_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13108">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13108:SF9">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05786">
        <property type="entry name" value="Cnd2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="7" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0226">DNA condensation</keyword>
    <keyword evidence="8" id="KW-0498">Mitosis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="103"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="11">
        <location>
            <begin position="30"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23336" checksum="C0A740ADC4CB0E95" modified="2025-10-08" version="1" fragment="single">DEPLLQEDSSVRWYNYDNPNDRRYIAEIDQDDNFAPDDSEGDFEPNNSDPLSQSQFENLLSEQSSTFNQQNRSFFQVDVQQLKSNLWRSLKAIEETKAFDENNVNEKMANSEEDSNLSDKNLDKNKNLSDQNLDKNKKLSDQNLGGKKISFKESVSLMKKRNKSMESVSVQYCFVCLLHLANENGLELKTPSLEDDFTVELQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB9</accession>
    <name>A0ABV2APB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, atp16</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ATP16</name>
        <name evidence="11" type="ORF">MHBO_002903</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATPase epsilon chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001286">
        <property type="protein sequence ID" value="MES1921369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12152">
        <property type="entry name" value="F1-ATPase_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.15.10">
        <property type="entry name" value="F0F1 ATP synthase delta/epsilon subunit, N-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00530">
        <property type="entry name" value="ATP_synth_epsil_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001469">
        <property type="entry name" value="ATP_synth_F1_dsu/esu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020546">
        <property type="entry name" value="ATP_synth_F1_dsu/esu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036771">
        <property type="entry name" value="ATPsynth_dsu/esu_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13822">
        <property type="entry name" value="ATP SYNTHASE DELTA/EPSILON CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13822:SF7">
        <property type="entry name" value="ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02823">
        <property type="entry name" value="ATP-synt_DE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51344">
        <property type="entry name" value="Epsilon subunit of F1F0-ATP synthase N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP synthase F1 complex delta/epsilon subunit N-terminal" evidence="10">
        <location>
            <begin position="45"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="19847" checksum="42251EF2394C2E6F" modified="2025-10-08" version="1">MYSLKHFVLPNCRTFRKISSRSFSAAKKERTFPKPTKQNVIPNKLKLTFSTPTSTLYKDVDVTSIYMSTADGMMTINGGHIPTIQELIPGIMRVHDEDGARSFLVSSGYATLHADSSAEIMAFSAIKFEDIDENKIKQGESLCKESAKSEDEKIANEAKLELEVYKMVKDSIINKEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ9</accession>
    <name>A0ABV2APJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003132</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001535">
        <property type="protein sequence ID" value="MES1921602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="338" mass="38829" checksum="F65C8B9D6DD1C8FA" modified="2025-10-08" version="1">MEPQKSYDKYIDYDFFGTNHIKKTQALKKPNDLNNVGSPKTFSDTITESKKQKNFPKNSPKTQKLKMPTKDRPFNVKIFRLNNNNWEDLNFFGLLYCDLKSALLDNKHSNKKILENFFIVDPQNVRSNAMSDAIIENKNIDKIRNPNKEHLKKSINFFGASKTIKENPKFGDFLMLQIFNKSNKKLALSHLVSNTIKYCRDGDSIITWAENGEEIALSFAEKEECDLVFELLLSENKSTRFNIGTFNDEELVSVIKKQKKMENKSKKMKIDGKTDSENDRKIENIIEKIETVTDDNLIKPSFGNLGSILVALSGDALSNCLGCCFKISHFNNKNNRKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL9</accession>
    <name>A0ABV2APL9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LITAF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003148</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001561">
        <property type="protein sequence ID" value="MES1921621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="102" mass="12138" checksum="A88D5F10A3C4C6E7" modified="2025-10-08" version="1">MTLKTTKMASKKIRKNRNYRKKKLLFYRKNSKNCKQKQIIFRKERERSIVYLILACLPPFILLLIVVAFKIRVPCPNCSYSTTVVEKLQWIVANYVNDKIPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR7</accession>
    <name>A0ABV2APR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002928</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001311">
        <property type="protein sequence ID" value="MES1921398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="26592" checksum="7006072859D56354" modified="2025-10-08" version="1">MAPEFYLPEKKWEGIHEKYFYETLKAMNLKEPTPFPKCYVSEPVYKELKKELLTCELETAERYAKNKPPPNLQDDYGLDQFADRIFDLLRQILMIPGYQNYKDALRCVSDKVGKYFEGGSILDVGMLKFLENENAGALLSVHEMNFWEKVSDLKSEVKALNNNHRHSSAKANLKSGELSRSANKVKRDSLAIKWENLEELEERKMRLCYMLSLARKCVAKSLALFVLSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU0</accession>
    <name>A0ABV2APU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003008</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001391">
        <property type="protein sequence ID" value="MES1921479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13752" checksum="6D44A25FF08A29DD" modified="2025-10-08" version="1">MIENRKSELNLIKRENLKNELYLVLKEINRIQQSCLAKNNVMKYHEFKEKASILLDIWKQVNNPKIHENYVERYIDAMILLIEDIGKTNEGFSIPRDPSGKLVKVGNNIINLFKLVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV6</accession>
    <name>A0ABV2APV6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002901</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001284">
        <property type="protein sequence ID" value="MES1921367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="130" mass="14731" checksum="EE628F4703987808" modified="2025-10-08" version="1">MDHLTMIFGNKDDRTGNKIWRELVPMNEKTFGVVVNGVAFWPRNLICFTASVRTKVSFTEGTSLLHLVHSKHPHITAMTAKNVAQVESIKLLKYLAKEESGEGRIFIPLKEKVLIQGNLRIARKSGFKRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX9</accession>
    <name>A0ABV2APX9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fibronectin type-III domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001693">
        <property type="protein sequence ID" value="MES1921733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="67" mass="7542" checksum="AB3AC378344080C9" modified="2025-10-08" version="1" fragment="single">SITTNQVVEQICVESTPPVTTYENNKKCFKKTSDTVLLEGLESGTNYTFTIYAVDSRLERRTDSTDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ71</accession>
    <name>A0ABV2AQ71_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">F-actin-capping protein subunit alpha</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CAPZA2</name>
        <name evidence="3" type="ORF">MHBO_003016</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Heterodimer of an alpha and a beta subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the F-actin-capping protein alpha subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001408">
        <property type="protein sequence ID" value="MES1921487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003863">
        <property type="term" value="F:branched-chain 2-oxo acid dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.60">
        <property type="entry name" value="F-actin capping protein, alpha subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002189">
        <property type="entry name" value="CapZ_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037282">
        <property type="entry name" value="CapZ_alpha/beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042489">
        <property type="entry name" value="CapZ_alpha_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10653">
        <property type="entry name" value="F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10653:SF0">
        <property type="entry name" value="F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01267">
        <property type="entry name" value="F-actin_cap_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90096">
        <property type="entry name" value="Subunits of heterodimeric actin filament capping protein Capz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0117">Actin capping</keyword>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU365077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13835" checksum="68D1ACBF58B40FCF" modified="2025-10-08" version="1">MVFSISSEEKQKIVKYLISKSPVNEVDKVVTDLRNILGKELSKKDCQNYLKTFYEDNHFFFSDSKGINTVLGEYCKVDDGKYYNSKEKMVVEVDFDSLKVVSTKRSKQETSSSIENFRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC9</accession>
    <name>A0ABV2AQC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003418</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001902">
        <property type="protein sequence ID" value="MES1921887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="297" mass="34944" checksum="EB267691E6E780BF" modified="2025-10-08" version="1" fragment="single">QSLENILIIQKCLKINDFEDEIEISNVYEKWLNINKKDDFYKNFSKTEYSINFFLLIINFLITRFGKDSENKIVLSNKKFGQKNELQNLLKNETFLTNSEIIEIENLRRKLKYIFLANFNKLNFSLFSPIDDVFEEFECAIFSKFSKFGSNLANGNFIENSSNNQNWTEKSKFLFEELEKSDKILNLKLVDSDENFRKFVQTVFDVSELVPDGIIVVVENFYRFCGLADLVKVVRNGEKVLFFETEDDLDFSVSLKMFARAVNIGRGSILFITDRRKLLQRVYLSNGYFLVKLTFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH2</accession>
    <name>A0ABV2AQH2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">FAD synthase</fullName>
            <ecNumber evidence="2">2.7.7.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">FAD pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">FMN adenylyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_003247</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>FMN + ATP + H(+) = FAD + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:17237"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="EC" id="2.7.7.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; FAD biosynthesis; FAD from FMN: step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.2" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001673">
        <property type="protein sequence ID" value="MES1921716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002500">
        <property type="entry name" value="PAPS_reduct_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23293:SF9">
        <property type="entry name" value="FAD SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23293">
        <property type="entry name" value="FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01507">
        <property type="entry name" value="PAPS_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0288">FMN</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phosphoadenosine phosphosulphate reductase" evidence="13">
        <location>
            <begin position="103"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00031871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00049494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1921716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="293" mass="33702" checksum="C6712F6BD4B8D1B8" modified="2025-10-08" version="1">MLKSFSIGVKDTNSRIARSINIIKRNLDKYRSDELAVCFNGGKDSTVLMFLLFLCYKSKGANLLPKELRVVCVTEEREFEDLRIFRERVSKIRKFAITYLPPPMKKSLNDLVRSDKIRAVFSGQRVGDPGAKNIAEETPSDNGYEPFLRINPILRWSHGDVWDFIKANRVPYCELYRKGYTSLGIPPFSLKNPFLSQGPNRFYPAWDLRLWETERMGRGVPLRDFNGAGNPRVCLVVSKDALPISKTQLEFARQNFRHLIAANLKSGLLPDIVILDRKDFNEAKKDFDLAYFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH3</accession>
    <name>A0ABV2AQH3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003136</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001544">
        <property type="protein sequence ID" value="MES1921607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11914" checksum="EDEA3311E39B99E1" modified="2025-10-08" version="1">MSVGESVRVTSKKYNVYQTFENCYVIGDKENGIFFDEGDSGSGVFLKDRTEDKLKPLGIAFAKRKFESGTFVCKIDKILQEFNISVIEKGVEHMNTFWPFYYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI2</accession>
    <name>A0ABV2AQI2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PLAC8 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003461</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001959">
        <property type="protein sequence ID" value="MES1921936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006461">
        <property type="entry name" value="PLAC_motif_containing"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01571">
        <property type="entry name" value="A_thal_Cys_rich"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15907">
        <property type="entry name" value="DUF614 FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04749">
        <property type="entry name" value="PLAC8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="123" mass="13748" checksum="540033689848ED76" modified="2025-10-08" version="1">MNIGSGLLNNVPANTNEIKGGEEKDWDNGMCSCCDDPLTSLMAYYFPCVIQGRTYAKLKDADSAVAYILIFCLLDMFGFSICAICYVRMKIREQRDIKGSKCGDCMAAWMFGCCTIVQSYREL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR0</accession>
    <name>A0ABV2AQR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003412</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001891">
        <property type="protein sequence ID" value="MES1921879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10472" checksum="7BF1659B3D707C2C" modified="2025-10-08" version="1">MKQIRIGKQSKRKVEKDVDNRLKNASNINTKNGDNSPKRTFLADNIDKNKLKNNEIDKFFQKVRNGLSGPSDDRKRKNSRSLRSQQKKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV1</accession>
    <name>A0ABV2AQV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003571</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002150">
        <property type="protein sequence ID" value="MES1922053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="7932" checksum="3EC5EBFBE0AEBA3A" modified="2025-10-08" version="1">MKKELVNIQESIPPQSVEKSTSQRQRKETVKREIAEKRLSMKSADQATLDAVLTENNSKLDKMGKSKLDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR06</accession>
    <name>A0ABV2AR06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">phosphoinositide phospholipase C</fullName>
            <ecNumber evidence="1">3.1.4.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003615</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.11" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002213">
        <property type="protein sequence ID" value="MES1922100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001192">
        <property type="entry name" value="PI-PLC_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10336:SF36">
        <property type="entry name" value="1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE BETA-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10336">
        <property type="entry name" value="PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="5">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8292" checksum="3BB0B4DF2214A124" modified="2025-10-08" version="1" fragment="single">EKVKKKTRTINGNGFNPVWQQEFNFSIPLKNSEIAMILFRVYSDNSLKGKTLLASNAFPVRLLKKGFFLKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR12</accession>
    <name>A0ABV2AR12_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine/threonine-protein phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PPP3CA_1</name>
        <name evidence="3" type="ORF">MHBO_003337</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPP phosphatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001788">
        <property type="protein sequence ID" value="MES1921802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043360">
        <property type="entry name" value="PP2B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45673">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00125">
        <property type="entry name" value="SER_THR_PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="2">
        <location>
            <begin position="79"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20784" checksum="F55467DB15ED4830" modified="2025-10-08" version="1">MAIFEKEKNVLRLGSPVVVFGDVHGQFYDLSNGLKKFCDFGRKKTLFLGDYVDRGCFSCECILLLFCLKIKYPRAFFLLRGNHETRKMTNYFNFKDECVYKYSLDVYNDFMKVFDRLPLCAIIDDKYFCLHGGLSPDILSVNGIERIERVVEIPRNGGLWFVFFKKAICFGLTQKKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR78</accession>
    <name>A0ABV2AR78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003688</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002334">
        <property type="protein sequence ID" value="MES1922171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="27426" checksum="AC04B7BCB31F53A2" modified="2025-10-08" version="1">MILKANSETFLEHNNKNSKLRLTEMERESEHLALKIKTLDIPVKSDYMYFTFLVKEHKKMIAIYKSEAAQVQKGVETSWSTASIKIKPEYQRLPMCIRVFQSGFLNDKISGDANFSRESLVAGKVIKLSKSGSKSNHDKGAINILKADFRDRYLQAPSQTISSVSETQRENKTFAFENYVVGGVTVSGIFAVDFSLDNQIGKISLHTKENGNMYAAALETTSKACFGITGLKEGHLWGYVFKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD8</accession>
    <name>A0ABV2ARD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003748</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002455">
        <property type="protein sequence ID" value="MES1922240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045107">
        <property type="entry name" value="SAC3/GANP/THP3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12436">
        <property type="entry name" value="80 KDA MCM3-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12436:SF4">
        <property type="entry name" value="LEUKOCYTE RECEPTOR CLUSTER MEMBER 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18998" checksum="503764E0A6C5DC6E" modified="2025-10-08" version="1" fragment="single">FKSKPRKFSQNDENDQNSETKINVLVPKNGSVKQNKKQSILSNLKVETLSTQQQINERKNRFKNNENLNSQKLNFPDSKFSFYTDKKGNDWGIIKGECTNLEKPYLRLTSKPDPSKIRPLPILKKAFKLFSQKWSKDKNYIKYIEQMKSIRQDLSVFQYKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE3</accession>
    <name>A0ABV2ARE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003450</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001942">
        <property type="protein sequence ID" value="MES1921922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051575">
        <property type="entry name" value="Myb-like_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46621">
        <property type="entry name" value="SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46621:SF1">
        <property type="entry name" value="SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="6">
        <location>
            <begin position="9"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="5">
        <location>
            <begin position="9"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="5">
        <location>
            <begin position="61"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="6">
        <location>
            <begin position="65"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13779" checksum="F9ED6AAE5A64BD13" modified="2025-10-08" version="1">MNRWKKTTNPNINKGNFALEEDIRIILAKRIYGDGNWKDVVKHVPKRTDMKCRERYCNVLDNRINKSRWTVFEDNKLNRLVKRFGTGKWSVIAKEMEGRTDNQIWRRWKLLNSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN9</accession>
    <name>A0ABV2ARN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed DNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">POLD1_1</name>
        <name evidence="9" type="ORF">MHBO_003720</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA polymerase type-B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010002389">
        <property type="protein sequence ID" value="MES1922209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.60">
        <property type="entry name" value="DNA polymerase family B, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.690">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1600.10">
        <property type="entry name" value="Palm domain of DNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006172">
        <property type="entry name" value="DNA-dir_DNA_pol_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017964">
        <property type="entry name" value="DNA-dir_DNA_pol_B_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006134">
        <property type="entry name" value="DNA-dir_DNA_pol_B_multi_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042087">
        <property type="entry name" value="DNA_pol_B_thumb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023211">
        <property type="entry name" value="DNA_pol_palm_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050240">
        <property type="entry name" value="DNA_pol_type-B"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00592">
        <property type="entry name" value="pol2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10322">
        <property type="entry name" value="DNA POLYMERASE CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10322:SF23">
        <property type="entry name" value="DNA POLYMERASE DELTA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00136">
        <property type="entry name" value="DNA_pol_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00106">
        <property type="entry name" value="DNAPOLB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00116">
        <property type="entry name" value="DNA_POLYMERASE_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="4 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA-directed DNA polymerase family B multifunctional" evidence="8">
        <location>
            <begin position="1"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00049244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="372" mass="41433" checksum="A6D4F83E15F91F82" modified="2025-10-08" version="1" fragment="single">YTTLVSKKQALTKLNKDDYVVTPNGDYFVTPKLQQGLLPQILRDLLQQRKKAKRDLRNAKDPFAKGVLNGRQMALKISANSVYGFTGASSGSLPCIAISSSVTAYGREMILQTKRKVESEFTAANGYKHDAKVIYGDTDSVMVKFGAKSVPAAMELGKMAAETVTKLFKNPISLEFEKVYQPYLLMAKKRYAGMLWTDPDKPSHMDAKGIETVRRDNCALARDLVQKCLDKLLIEQDVEAALEFAKRVIKKLLVNKVDLSKLVISKSLGKAADSSGYKVKLPHVELAKRMAKRDSGSAPMVGDRVAYVIVQGQKGARQYEKAEDPIYVLEKGLPIDTAHYLEHQLKMPLERIFSPIIGNVNQLLCFCFCVDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV2</accession>
    <name>A0ABV2ARV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003914</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002729">
        <property type="protein sequence ID" value="MES1922401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10393" checksum="CEAD6F267D372E17" modified="2025-10-08" version="1">MLLRHIEKYGEQPQYSKAEFCDWLKDGGIKKEIYKTKVLANTNGSYTIISENNTIYEIESCNNVIKIINNGNYEKWETPMCYNSYIGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS09</accession>
    <name>A0ABV2AS09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003782</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002503">
        <property type="protein sequence ID" value="MES1922274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18570" checksum="2825CD28952EA890" modified="2025-10-08" version="1">MSQLTNIEYKERTPTFLREIKKDLNISETKSANPLSLTEMFHFINKRKAVEKEVKERPFYDHEKPVITNLSDFSETDVKKFNSETNGQFLTETQIRNLKSTKISNKNHAQNIKNLKFSCSEHKNKLMAQQESHKKISKKDVKKLKIKEKLAKMSKILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS12</accession>
    <name>A0ABV2AS12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003968</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002859">
        <property type="protein sequence ID" value="MES1922453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7271" checksum="F92C938308F2CE5F" modified="2025-10-08" version="1">MTLKIINRKPKLILTENGIETVVQKIYVFATFKLIGLFKVHYIKIYLNNLDDGKQHVKILNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS13</accession>
    <name>A0ABV2AS13_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002863">
        <property type="protein sequence ID" value="MES1922455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="104"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="272"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="35757" checksum="D3912AB57CA9268C" modified="2025-10-08" version="1" fragment="single">FNNIKFTISKYIAQHRKSNPALMANSFVFVPPKVFVSPYELITVQNAGDNPSDKPTYINPSAFYKFGDKSQHEFMSSPESNSIEEEINYSKAVADSIQKKAAENNKIDVKRNEMINGKDKTDARNNQNEPTPKKSENANRRKNRKSIKIPKQEIGSKGEISSMSDQDVKILQIFETGNMLLALPVNMFGAKIIPSEGAFTTFAKNNLPFSPLGRNPASPLSNQNDAAAAFYGQFKNRFFPNSQKTPASPVSQLKNLGQYTSNLTVRIPTSPLSQLAQSPSPPAEKTAPSFKPGAKVGLAGKSTVPPGARNIFRETFKPRTKIPAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS20</accession>
    <name>A0ABV2AS20_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HEAT repeat-containing protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003679</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002313">
        <property type="protein sequence ID" value="MES1922162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051177">
        <property type="entry name" value="CIK-Related_Protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984:SF6">
        <property type="entry name" value="SCY1-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984">
        <property type="entry name" value="SCY1-RELATED S/T PROTEIN KINASE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="223" mass="25743" checksum="BD48A232840345A6" modified="2025-10-08" version="1" fragment="single">KPVTQLFTKKNHEKIWRYLIENLTVFLEMCEQSDFDNYVINFLASCLSHRSVILVTETLKALQKILTTDATFLTLPKVKKKLLPVMMKLLLIPKVKNSNIVRTCVLICLAKLLQHFFSDNLVKQITEIVEKSTKIEFEPDVVMSAICLYDNAVQFSNSKIIANVLLPKISPLITVSGLITKQKNKIYELLKICLNKIEEEYYEESTKEENEHSSQKDTINLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS26</accession>
    <name>A0ABV2AS26_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003989</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002906">
        <property type="protein sequence ID" value="MES1922472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013169">
        <property type="entry name" value="mRNA_splic_Cwf18-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08315">
        <property type="entry name" value="cwf18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="12091" checksum="56506E16147D7E73" modified="2025-10-08" version="1">MVEKTISFKNYVPSKESLREDENGSKAKTVLSTETVEIPQKNKIENFEDLFRTAEEESENIRIVPKKANWDLKEELLEQFEELENRSNLILEELRGFDIIVCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS92</accession>
    <name>A0ABV2AS92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003776</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002494">
        <property type="protein sequence ID" value="MES1922268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="37"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="105"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23186" checksum="8C06F6A6A823D0BD" modified="2025-10-08" version="1">MEPPKVPPKPQLKKIAENINSAQNNAKNLENEKEGKISFSSTSTISSLKPSTNIFLFEKTKSVSSENPFDFRRSTSNRKKTRRKQEGKNQSFPALDKEKAKKPSLNKSATDDVNNENAVVSASSRFGYSIDHLKKNKPNFSILLKDENVMENDSDEGKMVSFPEEMPSLKTNKFFKDIKVDSDEYKKYFSADLRFSTHREFDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB2</accession>
    <name>A0ABV2ASB2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004076</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003092">
        <property type="protein sequence ID" value="MES1922561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="7"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="7651" checksum="49E006A8EFEE26AA" modified="2025-10-08" version="1" fragment="single">IPTTNITKATTGSSTSPTASSTTSSSTSSTTSSSTSSTTSSSTRSTTSSTISSTTKQTATTKVTTSAATNVVINTTKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF5</accession>
    <name>A0ABV2ASF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004104</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003157">
        <property type="protein sequence ID" value="MES1922590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="217" mass="25367" checksum="5CCED5A599B91249" modified="2025-10-08" version="1" fragment="single">KTFSKMATKADPKTFSKTLLKTTSLFSKNTEISLTILNLFIKFDKICSNLISSNSLKFKSRLYILLNHQNEKIKNKDQLIWNRHNFKVDESMLQTLFKLSTEHRYDTICKLASTALSELTEKIDLFEKLLRMITIKMAKNDKISQKKNLIWLLAANSRNAKKSEFVKQIFDFFVASMETENLWEMALKSSLFAVKSLGFEFHSVIFPLLERYLKDKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH7</accession>
    <name>A0ABV2ASH7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004141</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003262">
        <property type="protein sequence ID" value="MES1922624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24353">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21856" checksum="9AD8FEF659C49850" modified="2025-10-08" version="1" fragment="single">RIKGVFTENESAFMLANVLLTLEKLRKRKVVHRDLKLENLLMDSEGYLKVIDFGSSVCYKKPLNFVCGTKEYMSPEMLGGQFYDFKHDIWSLGILMCEFLMGNVPFDDDNDVKRLKMMKNNKIFISEKVSFSAKNLIKGLLNPNPKIRLDINQIKEHSFFEKTNFNQINKKKVPSPVLYLIKNKYFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ0</accession>
    <name>A0ABV2ASJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004152</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003285">
        <property type="protein sequence ID" value="MES1922633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="197"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="27538" checksum="6555346E525CB987" modified="2025-10-08" version="1">MNRFQNQSTFYRDYSSEDEYDYIPYCIKDGYLYLRVPGCPRGPPGPPGNPGVPGQFIRGPKGYAGMPGKPGHIGVQGLTGEQGRRGLIGNDGERGYNGPKGENGERGVTGPVGMRGPPGEIGFPGQMGKMFSRKSCENGVNSNFYSSKFRDNEVQKPYFKAEKAHYFVQPHLNSESDQHHEMDPNGKNGDYHILERKEFEHDEMKNESLKEESDDSGKNVEMKDLNEKNFEVPFVKDEEFRFYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK3</accession>
    <name>A0ABV2ASK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003334">
        <property type="protein sequence ID" value="MES1922653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="10817" checksum="ED53BBBE7D6CEE7D" modified="2025-10-08" version="1" fragment="single">SATVGGVTSAGTTTENIQVDTVSNVTDSFVTTRTELHSAGVVSGTYTNDSTRATSSTSVTAGTVIDTGTESYATPGGAYSYSTTATSTINGTGSSASTESTNYVETYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM8</accession>
    <name>A0ABV2ASM8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF5050 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004183</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003365">
        <property type="protein sequence ID" value="MES1922665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="206" mass="24465" checksum="5E17F278F5F0A229" modified="2025-10-08" version="1" fragment="single">KTTKMGISLNQKNKKTADTTENFDNKISTYKISTYNLYKSLKSIILFPEVDFMNQKWEPQFKDRFNGRILAYFFSDKFLVIQTRIGFIKRDKVDYKYFLRLYKRIGKGKLAFMTKLNLNVKEKFNSFTVKGNVIYYTLLDDIFAFRTILIKEKNGTFYLQEGENGPKILFEPIFKLQNTILSNTKSYSANRVHNIYLISDQSRYFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX9</accession>
    <name>A0ABV2ASX9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Piwi-like protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PIWIL2_2</name>
        <name evidence="2" type="ORF">MHBO_004056</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003060">
        <property type="protein sequence ID" value="MES1922541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003165">
        <property type="entry name" value="Piwi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22891">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02171">
        <property type="entry name" value="Piwi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50822">
        <property type="entry name" value="PIWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Piwi" evidence="1">
        <location>
            <begin position="12"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11365" checksum="37EDDFCBA07C15F7" modified="2025-10-08" version="1" fragment="single">VQSFKNSFKHYEILKRAKGAYNPKITFVVVQKRVSLRIFNTNLQSGEPGTVVDHTIVSSRFWDFYMLTTKPPNGKTSRPTRYIVVYDDYGISNVLKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT08</accession>
    <name>A0ABV2AT08_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glycine--tRNA ligase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004333</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003787">
        <property type="protein sequence ID" value="MES1922810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.720.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027031">
        <property type="entry name" value="Gly-tRNA_synthase/POLG2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10745:SF0">
        <property type="entry name" value="GLYCINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10745">
        <property type="entry name" value="GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="193" mass="22243" checksum="AD83BD9B912B835E" modified="2025-10-08" version="1" fragment="single">NVKAWIECVGLADRACYDLAQHAKASKVELSVYETFDKPEKITKLEIKLNKALIGKTFKTKSKSIIERLSSFTENEKTDFKKDFDKYRNLKIAVNNKEYKLEREMIQSIEQIETERKGHSFIPSVVEPSFGIGRILYSLLEHSLKERTTSETNIENEEKREFLSFNPTIAPIKCLLTSLSGNKELKSKTEEIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT31</accession>
    <name>A0ABV2AT31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">diphosphoinositol-pentakisphosphate 1-kinase</fullName>
            <ecNumber evidence="3">2.7.4.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">VIP1</name>
        <name evidence="12" type="ORF">MHBO_004354</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>1D-myo-inositol hexakisphosphate + ATP = 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:37459"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58130"/>
            <dbReference type="ChEBI" id="CHEBI:74946"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.24"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="10">
            <dbReference type="Rhea" id="RHEA:37460"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ATP + H(+) = 1,5-bis(diphospho)-1D-myo-inositol 2,3,4,6-tetrakisphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:10276"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58628"/>
            <dbReference type="ChEBI" id="CHEBI:77983"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.24"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="9">
            <dbReference type="Rhea" id="RHEA:10277"/>
        </physiologicalReaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the histidine acid phosphatase family. VIP1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.24" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010003831">
        <property type="protein sequence ID" value="MES1922828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07040">
        <property type="entry name" value="HP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000560">
        <property type="entry name" value="His_Pase_clade-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037446">
        <property type="entry name" value="His_Pase_VIP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12750">
        <property type="entry name" value="DIPHOSPHOINOSITOL PENTAKISPHOSPHATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12750:SF9">
        <property type="entry name" value="INOSITOL HEXAKISPHOSPHATE AND DIPHOSPHOINOSITOL-PENTAKISPHOSPHATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00328">
        <property type="entry name" value="His_Phos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="184"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00033696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00034629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1922828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="26098" checksum="498DBBA9828C79C9" modified="2025-10-08" version="1" fragment="single">LEVKNDIEKKTKIKIALDILSKNLTGTKVQVKCKQTENDKISKVLIIVKWGGILTEKGKNQCKRYATKFKKVYRGLDDYSVLSRKSRVYASDEMRVKQSAKIFVDTLVGKKNKLQIRSDEKVEVLLNHASDADLLREKAKQKIHDLFNNPETATEILSEEKTKPVFGNNVPWIRRSYRRLDDPKQRLVQILESLKQVIKKIENASNVKNSENYEKNGESILSILKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE1</accession>
    <name>A0ABV2ATE1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">B box-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004468</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004092">
        <property type="protein sequence ID" value="MES1922936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.640.40">
        <property type="entry name" value="Cytoplasmic polyadenylation element-binding protein, ZZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038446">
        <property type="entry name" value="CEBP_ZZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018553">
        <property type="entry name" value="E2_Ub-conjug_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057668">
        <property type="entry name" value="E2_Ub-conjug_enz_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000315">
        <property type="entry name" value="Znf_B-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31560">
        <property type="entry name" value="UPF0652 PROTEIN C16A11.03C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31560:SF0">
        <property type="entry name" value="UPF0652 PROTEIN C22H10.08"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22586">
        <property type="entry name" value="ANCHR-like_BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09418">
        <property type="entry name" value="DUF2009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50119">
        <property type="entry name" value="ZF_BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B box-type" evidence="3">
        <location>
            <begin position="11"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="54"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="26056" checksum="329D13ADEAE23852" modified="2025-10-08" version="1">MNGVDSKIEASFEDMCVECEDQPHSVLCETCKESFCLPCFQQIHQKGTRKKHQYKDSQRSKSNADSKTETKVGIALDEQDDYNVLKLPEKTRKEQYGATFELFDNFSIETFVERAKYIPLRPTMKERKLLRLVEATMDISEYTDKVDIVSFRSKKKRIFAQIKDICSILTGLVVATDYKEGKTLLEKSNFGRSENFFQDAFEVARRHKIRNPEKSRNSCKILHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM1</accession>
    <name>A0ABV2ATM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004557</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004394">
        <property type="protein sequence ID" value="MES1923023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15319" checksum="8508F878FF9CFD83" modified="2025-10-08" version="1">MDHSKRYLFSKHIDRFLIFLFSFIAAIHLVSLNLVLFLIDEKENWILAVIIHCGVATFVCTVLSLFFAFFGIKCRASLSYYRRMLEFYKQRNAMLFSESILTESFDKKQVGRNIKKIIKLQKKIAQYDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR7</accession>
    <name>A0ABV2ATR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal protein P0 (A0) (L10E)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RPP0</name>
        <name evidence="2" type="ORF">MHBO_004590</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004495">
        <property type="protein sequence ID" value="MES1923056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="56"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="11800" checksum="8D814488344885E5" modified="2025-10-08" version="1">MQQSDVLALFTTTASTVGAIGLETGVPNTISVAYSLRDAMRMLFAVTSETDYSFKEAEEAKEQMARTPTNAKEEDKKEEEEKEEEEEKDEGAGMGNLFNDFEEDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS2</accession>
    <name>A0ABV2ATS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004593</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004502">
        <property type="protein sequence ID" value="MES1923059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045924641" evidence="1">
        <location>
            <begin position="21"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="21602" checksum="467D5139C5C3BE48" modified="2025-10-08" version="1">MSISYLFCVFILLNLHFNVADDECTNTDVVPPLKLTGSNTDYTANETAVAAKCTEGNMKDGFELFCLNSTWRFDDSDPYTSVTQESSDKFCEVDNCNLSDVKPPIVLVNQMVQEAKNDTSYAANCAEGDNTELFYLYCFKKVWYINEGEKNDPDNVVMNETTSNEFCRTDNAANTQIPMFSTTLFAILLLIAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW0</accession>
    <name>A0ABV2ATW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Exoribonuclease phosphorolytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNase PH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003902">
        <property type="protein sequence ID" value="MES1922856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="entry name" value="GHMP Kinase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050080">
        <property type="entry name" value="RNase_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953:SF0">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT RRP41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="2">
        <location>
            <begin position="18"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15722" checksum="473C6B804FF75769" modified="2025-10-08" version="1">MEYLSFNNLRTDGRRPTETRKIDCKLGVVENANGSAFFKFGQTLVVTSINGPRESSFHYKFPPDRADIVCHWKTGNSAKPQHSGKRSFNKKNREREDFMARTVEGIIFDNLLKKTVIEINIEFFQCDGGLKYDFDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW6</accession>
    <name>A0ABV2ATW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004348</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003818">
        <property type="protein sequence ID" value="MES1922822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11892" checksum="E7706D09219C522B" modified="2025-10-08" version="1">MPLRFRSVTHYSQKYKYLSHNPPEGYLSKLEIARSNKLPNLGCNRLGYYFYTQCFYGVHHNLQVGFDVNKLITIQFMHFSVFWRKNLKRSTFKYSRSPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX2</accession>
    <name>A0ABV2ATX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adaptin ear-binding coat-associated protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">NECAP1</name>
        <name evidence="2" type="ORF">MHBO_004636</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004647">
        <property type="protein sequence ID" value="MES1923097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012466">
        <property type="entry name" value="NECAP_PHear"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12847">
        <property type="entry name" value="ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12847:SF9">
        <property type="entry name" value="NECAP-LIKE PROTEIN CG9132"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07933">
        <property type="entry name" value="DUF1681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NECAP PHear" evidence="1">
        <location>
            <begin position="2"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16884" checksum="32C43FA82CC2B490" modified="2025-10-08" version="1" fragment="single">LPETSSSSNFVCKSWNLSEPFWTGKLKVHLKGNLIKISFVEKNNVNIFAQSETLDLEKTKEEELANFLRPVTDSSRYFVIDVKEPESDRKMTIGFGFKSRSESFDLNECLQRQLKIAKRKNESTSEEDFMAMLEARNKDSGRFSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX7</accession>
    <name>A0ABV2ATX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein arginine N-methyltransferase 8</fullName>
            <ecNumber evidence="2">2.1.1.319</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PRMT8</name>
        <name evidence="2" type="ORF">MHBO_004399</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.319" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003937">
        <property type="protein sequence ID" value="MES1922871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035242">
        <property type="term" value="F:protein-arginine omega-N asymmetric methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025799">
        <property type="entry name" value="Arg_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006:SF4">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="17892" checksum="774DB4D26EF07966" modified="2025-10-08" version="1">MDSCCKVAFIYNGEKKEFGISDNLNELYNSISAFFKIDLNYIDTFFIENISTKSVCPLSLNNVENGLVYNLLIRYKSQNNPESTNSDQKQGSNMQDNEYFGGYANLSIHRTMLSDKVRTLKYKQSIEECGNLIKDKIVLDVGAGTGILSIFAAKAGAAKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU22</accession>
    <name>A0ABV2AU22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004709</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004950">
        <property type="protein sequence ID" value="MES1923164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002547">
        <property type="entry name" value="tRNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051270">
        <property type="entry name" value="Tyrosine-tRNA_ligase_regulator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11586:SF33">
        <property type="entry name" value="AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11586">
        <property type="entry name" value="TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01588">
        <property type="entry name" value="tRNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50886">
        <property type="entry name" value="TRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 3" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="TRNA-binding" evidence="4">
        <location>
            <begin position="70"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15132" checksum="4D07A5D24D4E366E" modified="2025-10-08" version="1">MSLNKTKKLINDALWNPNIPVGHTAFSWNVNEKSPVKDETNAIKKETSALKYKKMGEKSENGQTKKVLSPFDRLDIRVGKIVDCQKHPNAEKMYVEKIDLGEESPRQIISGLSDYIPISEMKTDVLVVANLKSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU35</accession>
    <name>A0ABV2AU35_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004738</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005055">
        <property type="protein sequence ID" value="MES1923193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046277925" evidence="1">
        <location>
            <begin position="21"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6905" checksum="87234BD32F945491" modified="2025-10-08" version="1">MDVENMVVCLLIRFVYMLQAKSCLDTLNPLNFQGSSWNHIATPQALDELTQFRPYVWRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU74</accession>
    <name>A0ABV2AU74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005090">
        <property type="protein sequence ID" value="MES1923207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11505" checksum="284A7D61BFD24F93" modified="2025-10-08" version="1" fragment="single">MEKMDNSWYNDPECMFSSSKARDKVNNVSQSFGINAKDVLPMIHKPSNTKNAEELASYNLRYILSMAKDFLELIKCNEHGIWHSPVDAIKNYMSVTMRKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE0</accession>
    <name>A0ABV2AUE0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004833</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005433">
        <property type="protein sequence ID" value="MES1923284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18674" checksum="57B48AA596BBE2DE" modified="2025-10-08" version="1">MSDGYQIKNSIATIPMTIRRFLNIGADQFREALKQIKIKVAVFKTNEEHVTFASTEIKHAVMYRFVYSCLKTDEDLETYIEQSSTDSLMEYCRLWDYKRDEEETCVFISPKFRDAFIKRLDRNVIIHAMIEDRADSDEQSSYVDTRNEISELRKCIKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK2</accession>
    <name>A0ABV2AUK2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004597</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004512">
        <property type="protein sequence ID" value="MES1923062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046828866" evidence="1">
        <location>
            <begin position="19"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="14066" checksum="0DF396AB73A895E6" modified="2025-10-08" version="1">MSYLILLIALLNFNFIHGTFELMFSVNDCMDLIEFQNDGTYGCKAALQCCEYYCLEKRHRLFNEDLSLCSETAEKFYRKISFKSTWRKRYLYNLCQCKRGTKKQVAAAIKKLNDLVDKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU4</accession>
    <name>A0ABV2AUU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004999</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006160">
        <property type="protein sequence ID" value="MES1923428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021145">
        <property type="entry name" value="Portal_protein_SPP1_Gp6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05133">
        <property type="entry name" value="SPP1_portal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="51" mass="5912" checksum="C82E580FB8374E6D" modified="2025-10-08" version="1" fragment="single">EDKLKTNATQKGTISEKTRLSNHPWVKDVDKEMQAIEDEEPDMLEDEEPIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX7</accession>
    <name>A0ABV2AUX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005031</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006293">
        <property type="protein sequence ID" value="MES1923457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10360" checksum="294C980960D4891D" modified="2025-10-08" version="1">MGINRKCFVRSLQNIQPKKRKDAISIDTQSSIEEFYRQEDISINVPNKKIVKKDNESKFVFQGSYLDCYQKFKKNQPNSKVSRGKVGTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV02</accession>
    <name>A0ABV2AV02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005069</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006439">
        <property type="protein sequence ID" value="MES1923493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9072" checksum="BC1B2C2D966451E0" modified="2025-10-08" version="1">MKSGKVIRVGDILSDTEEEEETGNLSNSPDIFDSRTSTAICSVVSITEKEFDKRTQFTQTEAMEEGWDQTCGCHSHHADGNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV67</accession>
    <name>A0ABV2AV67_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PITH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004897</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PITHD1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005693">
        <property type="protein sequence ID" value="MES1923336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.470">
        <property type="entry name" value="PITH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045099">
        <property type="entry name" value="PITH1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010400">
        <property type="entry name" value="PITH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037047">
        <property type="entry name" value="PITH_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12175">
        <property type="entry name" value="AD039 HT014 THIOREDOXIN FAMILY TRP26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12175:SF1">
        <property type="entry name" value="PITH DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06201">
        <property type="entry name" value="PITH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51532">
        <property type="entry name" value="PITH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PITH" evidence="2">
        <location>
            <begin position="5"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22506" checksum="9296A77FE84160FF" modified="2025-10-08" version="1" fragment="single">HNHEHKHDQNLSKNSLFNAIDKINISTLNESIIDSSKSVFKPWHERFDYGEVESNEDIPELLMFVPFCQVVDVHSIAIVSKDARFCPVVAKIWSNKREISTFECVENRESDQKIDLMEDQNGEIHYSLNRSKFLNVERLAIYFASEEKSKIAINHIELRGKIKMAKSRAVKTVYEVNRSGSKGLISNAENKFLVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV72</accession>
    <name>A0ABV2AV72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004934</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005857">
        <property type="protein sequence ID" value="MES1923369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19175" checksum="6F61B26CED69EC3F" modified="2025-10-08" version="1" fragment="single">MPYVYDDDQWVPAATNFKGDKGDSGVADLTALIKKYGDDGRVRFDEANKHFYFEVLQGNVWIQKAEIGASIIVDALRLIKGDKPTNIAPDELAIYNKEITLGDGTKTIRPEIVFPDGSEYGLVVNDQQTDDVVFRKNDGTLVHIPVSYSDEDGHIYKDFKKIKFTGGVAISR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVS8</accession>
    <name>A0ABV2AVS8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005042</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006322">
        <property type="protein sequence ID" value="MES1923467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6715" checksum="30DC65A76BC8EF15" modified="2025-10-08" version="1">MRDTPKWCDLLNPCDDHVTPYTCEPPKTSSTLNTHATAYTNATSITCAIPINYDSLHPYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVY2</accession>
    <name>A0ABV2AVY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_005061</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006415">
        <property type="protein sequence ID" value="MES1923483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050746">
        <property type="entry name" value="DAACS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958:SF63">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958">
        <property type="entry name" value="SODIUM/DICARBOXYLATE SYMPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046003631" description="Amino acid transporter" evidence="7">
        <location>
            <begin position="19"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="106"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="16609" checksum="4E3A5EB6F3B4F2F3" modified="2025-10-08" version="1" fragment="single">SIAFYLLTSFFAALQGLAFMNIIKPGTHNIACTVTSQVHQIGPVQKLTFLDSMIKMLKLAIPANILLAITNDNILGVLVIFLTIGFFMAGYIDTEGGKQMKTLLDLIYQTIVDAVYLVIGFTPIGVFSLIAGQISQLSDLCILAKMGIYIAVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWA3</accession>
    <name>A0ABV2AWA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Heat shock protein 83</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">HSP83</name>
        <name evidence="6" type="ORF">MHBO_005132</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006788">
        <property type="protein sequence ID" value="MES1923543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020575">
        <property type="entry name" value="Hsp90_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00183">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00775">
        <property type="entry name" value="HEATSHOCK90"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="108"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="121"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15105" checksum="29815AA9E1133426" modified="2025-10-08" version="1" fragment="single">AIQAGADIQMIGQFGVGFYSAFLVSDLVEVRSKSNDGKQFVWTSTASGEFHIYDDSENEHQLKRGTEIVLHLKDGQTEYLEENKIKEIVHKHSEFVGPQILLWTSKEVEKEVSDDEDEKKEDEKKDSDKKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE56</accession>
    <name>A0ABV2AE56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Brefeldin A-inhibited guanine nucleotide-exchange protein 1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ARFGEF1</name>
        <name evidence="9" type="ORF">MHBO_000018</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000003">
        <property type="protein sequence ID" value="MES1917982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00171">
        <property type="entry name" value="Sec7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd23022">
        <property type="entry name" value="zf-HIT_DDX59"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1000.11">
        <property type="entry name" value="Arf Nucleotide-binding Site Opener,domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032629">
        <property type="entry name" value="DCB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015403">
        <property type="entry name" value="Mon2/Sec7/BIG1-like_HDS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032691">
        <property type="entry name" value="Mon2/Sec7/BIG1-like_HUS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023394">
        <property type="entry name" value="Sec7_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000904">
        <property type="entry name" value="Sec7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035999">
        <property type="entry name" value="Sec7_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10663">
        <property type="entry name" value="GUANYL-NUCLEOTIDE EXCHANGE FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10663:SF375">
        <property type="entry name" value="LD29171P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16213">
        <property type="entry name" value="DCB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01369">
        <property type="entry name" value="Sec7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09324">
        <property type="entry name" value="Sec7-like_HDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12783">
        <property type="entry name" value="Sec7-like_HUS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00222">
        <property type="entry name" value="Sec7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48425">
        <property type="entry name" value="Sec7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50190">
        <property type="entry name" value="SEC7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="SEC7" evidence="8">
        <location>
            <begin position="545"/>
            <end position="735"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1215"/>
            <end position="1250"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="1215"/>
            <end position="1228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1230"/>
            <end position="1250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1917982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1534" mass="177729" checksum="6DC4C3CBDCE282FD" modified="2025-10-08" version="1">MPSHSNFQIYLTESLFLLKKTCSRRDKNVTESIDSVLTKLKNNVHPMESINLNILEPFKLACESRSTKLMGVSLDCLQKLISTSLQNYPLEDPTFTHAKNNEKCINQVLKIICGCGLNPSDEIVLKVVQNILTAISSSYDIHIEHLFYAVRTCFHIYLSSNSKLNKTCARATLAQIVQVTFDRSKNFMKLFEQLLKTQKNNKELSNKKFSMINFEEIKMNSFSEDFITERKNKSDRICREIVIDMIRSKVLGQLSGKYGFCTVCNRSADHFCLQTKDSVCSMKCKIKNLSSIILYKETNPNQKHFLSIVLLTILYQNNCLLILRSLCSLANSNLDGIDFTSYNSKNEKPLKLQSKELSLDLILHILKGNSENIKKSKLFLDLIKSKLIGLLIQNVFEKNSNINGTTIAIFLELLKNFKTHLKVEIGVFLQCILIKIIESKNSNYRQKLICAVVFLKVCSSEQTLVDIFLNYDCNTNGFKIYQTIVSFIEKMTQMKLTVKDWINESQETQLKMIALGCFKKLFQSLLKWVENAIKIRKEKFSKNLGFNKKFNQKMEIENVLEKAIVKFNESPKMGINMLQSVGIIDIKSPTNIAEFLYKTPNLSKEAIGKYLGKSENEDILSAYVFLFEFDDLKIDIALKKFLNNFLLVGEGQIIDRIMSKFAVKYCYDNPNVFSSSDSAHLLSYSIIMLNTDLHSDKITNKMSRNDFVKNNKNVVKNEEIDTIYIENIYDRILKEEIRLDSNSEHDSNGYVTPKSRERNFINEEKEIKKVAERYVKTGQNSREFIDEFINADSDNIEIIFCMFESVWSSSLASLSILLDKSDDSNIVSVCLETYTCAIKLATFFKMDIIKEAYVNTLAGLTLLGTTKDMKPKNIMAIITILDIAHDEGNSLDKSWLTVLRCISNIEHLHLIGSGQTTDSAHFSLDDDKINDFQAMLMNSGFISQYSVPIPIETENDVNSKAVAFLIEQNKIDRIFMNSDNLNDDKILTFFKYLCKVSIEEINNESGSRIFILEKIVETTICNLHRNAKIWDEIWDYFYELFYNGGTVKNTNVGKYVINSFRVISTRFLSKKKFSEKPNIQKKVFKPLIMIMAKIDDFGIREIIIQCVFMLLQSVSDNLSAGWNGVFEIASIAAIDPRERICSAALNLVNFAKSKISVKNKTQNIEAFSGIFTFVRSANINYHGKLVEKSLEINFYVLNTFLKELLISENENIKSSKRKNRRKKSKYRNLAKNNDQNLAENNDQNLAKNNDQNFAKNDDLNLAENKNKERKSIEKTKFWINFGIKNILLMIFKENVELATQSTAINNLEKLLKHFKKLNSEIWTKIFETIFSKFRTNVNKRENLTEFENYLDRLEIEQIENIFVNVKQNNEKTIFNQNLEKYQIGNWNKRIFKNENKYVLENLLRIIIDILSENDLKFLNNKLILAFEQISQLENNTDKTLLKTIKYHHGREIIDFKLYLKTLQNIFHKNQANILKCVSRNFTNSENWSLNEYEINLKKKFEIEKISNKEKMQIRLKFIKFIEIVQIFVKFLNQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEB4</accession>
    <name>A0ABV2AEB4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000087</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18025" checksum="068316C8D8B329FD" modified="2025-10-08" version="1">MRDDSAELDLDEDQQELYAAVFAKTGEIKAEAFVRRTQNKPRPNRAKSAVKDTTGEMARKLAAIGYQPAKAVSRIQRDGKLEKRKNRVKTDFARERNELAALAEEHGLSFEEETRQKRMSNRAIRKSGAGARSGGTGRVLTSRPKHLFSGKRKLGKTNRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEF0</accession>
    <name>A0ABV2AEF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">NuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">YAF9</name>
        <name evidence="6" type="ORF">MHBO_000109</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16910">
        <property type="entry name" value="YEATS_TFIID14_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1970">
        <property type="entry name" value="YEATS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038704">
        <property type="entry name" value="YEAST_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005033">
        <property type="entry name" value="YEATS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055129">
        <property type="entry name" value="YEATS_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47573">
        <property type="entry name" value="PROTEIN AF-9 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47573:SF1">
        <property type="entry name" value="PROTEIN AF-9 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03366">
        <property type="entry name" value="YEATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51037">
        <property type="entry name" value="YEATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="YEATS" evidence="5">
        <location>
            <begin position="15"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="26118" checksum="6C84F039CE852C3A" modified="2025-10-08" version="1">MERSDQSANFGFLESDYRNKVEKPFVYGSIAFWQGKKARQEKSHKWFVYVRGKQNEDLGLIIERVEFTLHTSFENPVRVIKRAPFVVEEYGWGEFGIGIRVFFRDKGFPPINLLHNLKLFTKNIPSRKPVLSEKLDAFVFFDPPENLIKAISDCEQKILKNPDLDEHFQENTRGFSLTEEREVKRIAKDLKMVLREISSTNDQLLILKDKEKLYKTKAEKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF61</accession>
    <name>A0ABV2AF61_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Thioredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">TXNDC2</name>
        <name evidence="4" type="ORF">MHBO_000123</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the thioredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000015">
        <property type="protein sequence ID" value="MES1918104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46115">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000077">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="1"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12211" checksum="A5D61FE6EA5E7517" modified="2025-10-08" version="1">MVEQLETIDEFKQKVEEGNSLAILNHYADWCRPCKVAMPKFEELSKKYSQFKFYKVNIDSSEELTKYCEVVSVPNFSIYLNVKKIASFTGFQQEKIEEVLNNIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI2</accession>
    <name>A0ABV2AFI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000042</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="35210" checksum="3E719E903AAA2F68" modified="2025-10-08" version="1">MNSNELNENDLETSFSNLSRENSVEPSYPPQTPSPSATGYSIYERTISSGGCEITVEESEPPETICSTKEHIITVSKNSTEYIYELTYLATDHFVNRYISLLTRCPLMAPSEMSTFPSRGGRLMKKISLDLSNGTLVNKDFTTEDIKKNIVKQLRFLIKVIVQLDLLLVKPIEELCYDNNGNLMVGKIELSDNTDENVALHLLCVDKTYEKSVELWEKEGRTDLKNAWESGLKDERMAFLRSLSDKTFKLFVIDIHDFNSAEISFIGKTELRVKIVLSKVEYIIIVKEEISDKGVTYTANFLNYFVVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP2</accession>
    <name>A0ABV2AFP2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SP-RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000090</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004181">
        <property type="entry name" value="Znf_MIZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51044">
        <property type="entry name" value="ZF_SP_RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SP-RING-type" evidence="5">
        <location>
            <begin position="108"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17656" checksum="B22655A320591B01" modified="2025-10-08" version="1">MNKKKWRVFGDSKKRSSSLICEISKKRFLERLEKRRKMNASEEVELLQPPKVIDLTTDKPNPWLPPGFKPNRKFVFKNSQKKGGRDKIAAKLISFENRKKQIKLGFSQLSEIQQTLVRVPLFDSITLLRIETPVRGPKCSHLASFELKTFVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG05</accession>
    <name>A0ABV2AG05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Structural maintenance of chromosomes protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SMC1_1</name>
        <name evidence="6" type="ORF">MHBO_000564</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000096">
        <property type="protein sequence ID" value="MES1918621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1060.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010935">
        <property type="entry name" value="SMC_hinge"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036277">
        <property type="entry name" value="SMC_hinge_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937:SF12">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06470">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00968">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75553">
        <property type="entry name" value="Smc hinge domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0498">Mitosis</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC hinge" evidence="5">
        <location>
            <begin position="23"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19413" checksum="BE2BEA24F1A01FA6" modified="2025-10-08" version="1">MRVSERDRRRVDNFNAVKTAFPLKVKGFVADLIKPIAKKYRVAVSSALGMHNLDAIVVDSRRTALDCIGELKRRRLGTATFLPLDGLKAKAIKTQNRRIASDVKLVLDLVSFRKEHQVLAEFLCGSAVYAETLDRAREVCYRRRETRNKFLTMKRTFCNPKNNFLEKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG38</accession>
    <name>A0ABV2AG38_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">MFS transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000569</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000096">
        <property type="protein sequence ID" value="MES1918627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018043">
        <property type="entry name" value="Na/Gal_symport_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328:SF28">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13347">
        <property type="entry name" value="MFS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00872">
        <property type="entry name" value="NA_GALACTOSIDE_SYMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="26"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="163"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="197"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="247"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="282" mass="32053" checksum="C965571360B0DE80" modified="2025-10-08" version="1">MTDNEATPNIITDKSPKSEKIHFRTFIFYGIGALSNGWAVSAIGFFVLFYTTSIVGMEPSDYTVISIVTQVINAVSDPIIGVWSDRVKTRFGRRRPFILASSVLMGLFYGLFFTKIEISNRFWLVVYYQVMFAGFYLAQTCFNVPHIALVMELTEQEQTRNKFVAFSAFFFSIGNLLGPVTLLAAEKNLFSDKAMAYAAMGGITAVVMALCILTVFFGLKEREMPKRVRSIRQVLSEAISVMKYKSYLYLTMAYISVQIAIQALQFNLRLYIEHVVKFETFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG65</accession>
    <name>A0ABV2AG65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000232</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="31232" checksum="EA67BEEA421A75BE" modified="2025-10-08" version="1">MSAQTANIQKSRQTTVFPGTKLSYGIKSFFPAKKNQLYENESEELKIFNFTERGQNLKEGNSDIGRRTNNCDRGFKGPKDGNSDQNLQINLCKNSFEHGGNAANLVGKNMLFLKENDNEKSNLDKTVNCFIETFGHSPLFPGAEEDGRTSQNRFFEERSIDKLRETAIRLRRAGAEALSLLQSVISSVPDSLFEKPAAINALKSRRCSSSSPQKSLKSVSKRNLVRSNLKFVRFLPRAGQSTPGKTALRLWKDKDGIAFYDCSCEGRIPSFLLTKQSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF0</accession>
    <name>A0ABV2AGF0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">UDP-galactose transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000675</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000120">
        <property type="protein sequence ID" value="MES1918765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013657">
        <property type="entry name" value="SCL35B1-4/HUT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10778:SF8">
        <property type="entry name" value="ADENOSINE 3'-PHOSPHO 5'-PHOSPHOSULFATE TRANSPORTER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10778">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35 MEMBER B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08449">
        <property type="entry name" value="UAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="92"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="243" mass="26971" checksum="3265F76BF54CB7B3" modified="2025-10-08" version="1">MFAMIKLGHDRKLGLLKDEMTWAKAKNLLVISISMCASKGLTNMIIFKSLKLLSIMFVGYFVLHNKPNCKETSAACLLATSCVLFTLGDMDISPSFSFFGLVIVLLSLVGDAFHTNFQEKGLKNGVTVSEILMFSNFFAFLQTFVIAVWTREIAVGFEYCSHKPLIYLLITMRSLAIYLGAACFMQLIKDFGSVLAATITTVRKIVSVLLSFAVVAKPFTFKYLYAGVFFVLGLGVDVSRRIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG4</accession>
    <name>A0ABV2AGG4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">40S ribosomal protein S17</fullName>
            <ecNumber evidence="4">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPS17</name>
        <name evidence="4" type="ORF">MHBO_000679</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eS17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.60.20">
        <property type="entry name" value="Ribosomal protein S17e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00511">
        <property type="entry name" value="Ribosomal_eS17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001210">
        <property type="entry name" value="Ribosomal_eS17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036401">
        <property type="entry name" value="Ribosomal_eS17_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10732">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10732:SF0">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00833">
        <property type="entry name" value="Ribosomal_S17e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116820">
        <property type="entry name" value="Rps17e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17288" checksum="E66E31FEA53509E1" modified="2025-10-08" version="1">MGRVSNKIVKNASKKIVEQYYKRLTLDFYTNKRVIEEVVETPSKKVRNKIAGYTTRLMRRIQRGPVKGVTLKLQEYERERKMDYEPLVSDLDTRRILIDPDTEQMVKSVIKRIAPVNPEDYNMTNLELIKKPSHEREKRAKRAPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI3</accession>
    <name>A0ABV2AGI3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000704</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000128">
        <property type="protein sequence ID" value="MES1918800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="344" mass="40007" checksum="0A3705E29EEBF25C" modified="2025-10-08" version="1">MGKDPNWCTQCEGNGYFCKDGKTSSITYFSRIQFKANCKDCSGLGIKKSKSIKEKDGKNKKKNGFSVETSFSTKSEVNAESVEQSLGKVPLPPEEKPRMDSRFKKKFSMRNDVKNVSVYKEYKSKLEIVMDNLHMLTVAIDRLKKISVTMARELRDRYKHNTQSNNSIKDINFNSRSYSTINCFIDFLDNNNISDQEIVLMLKNTETFALTTDVFISECKTAYKKLKKDEENTTKVLEGKILEAEKLRKKCNDLVTKLSNIVRSSVSATNGRKLDFFFKFKKKDPEATNKKLSSLRESAHRYTTIYERNLEHLNEDMNSYFEVYIREKCEKLDYLYIEVNRKLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI5</accession>
    <name>A0ABV2AGI5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Malate dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MDH1_1</name>
        <name evidence="7" type="ORF">MHBO_000699</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(S)-malate + NAD(+) = oxaloacetate + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:21432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the LDH/MDH superfamily. MDH type 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.37" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000127">
        <property type="protein sequence ID" value="MES1918795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030060">
        <property type="term" value="F:L-malate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="entry name" value="Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001252">
        <property type="entry name" value="Malate_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010945">
        <property type="entry name" value="Malate_DH_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23382">
        <property type="entry name" value="MALATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="LDH C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00068">
        <property type="entry name" value="MDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="2 3 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Lactate/malate dehydrogenase N-terminal" evidence="5">
        <location>
            <begin position="2"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Lactate/malate dehydrogenase C-terminal" evidence="6">
        <location>
            <begin position="113"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16618" checksum="4132D004CA10FBE1" modified="2025-10-08" version="1">MKKLRGVEMEIEDCAYKLVDKTVITDQLDVACKDIDWAVLIGGFSVKGSWKNFERDSLLSGNVPIFSQMGKAINEHAKKSVKVVVVANPANTNALTLMQNAPSIPKKNFSALTRLDHNRAISELARRLKVPNEKVQNVAIWGNHSRTQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK1</accession>
    <name>A0ABV2AGK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000709</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000129">
        <property type="protein sequence ID" value="MES1918806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13389" checksum="E51EF0B3AB29948C" modified="2025-10-08" version="1">MLHARQFFAFEKLKTGTSASAHMAHFSRYAQLLSSGCSVSAADNRSDIGVVLSRGRDALQNKVGPVRESVEFEHSQRTKLKVGNPFQTIVFALSTTFLNRSRDFSPQSSPIKSLGIPSFAVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM1</accession>
    <name>A0ABV2AGM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000729</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000134">
        <property type="protein sequence ID" value="MES1918829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="19697" checksum="72D256D2D3C71575" modified="2025-10-08" version="1">MDFLLIANIALGVLALIFYIVMLANQFWIKVVQNNSSITWLTLKGFLFIINGQTTTASFGENGTCNSDCETMKNASNTVMAFLIISLLIVLLVCVVHILLKFEIISFELKLPLRVVSVILIVLSILNPIIYSATVLRLAKKNFSIADVGANYVLLWLTIPITIAFSVLNEMNIRTKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH19</accession>
    <name>A0ABV2AH19_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Deoxynucleotidyltransferase terminal-interacting protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">DNTTIP2</name>
        <name evidence="5" type="ORF">MHBO_000845</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000166">
        <property type="protein sequence ID" value="MES1918960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039883">
        <property type="entry name" value="Fcf2/DNTTIP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014810">
        <property type="entry name" value="Fcf2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21686">
        <property type="entry name" value="DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21686:SF12">
        <property type="entry name" value="DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08698">
        <property type="entry name" value="Fcf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fcf2 pre-rRNA processing C-terminal" evidence="4">
        <location>
            <begin position="71"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="131"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="22201" checksum="6AA3FEE3D0902FFF" modified="2025-10-08" version="1">MAEKFNSKQEKNFIKSLFSSNYDYLDKRHVTKPETSFSDKLLKTKSIFNNIKEGEPIPPLVKQKNKKKIGDSGKDWFNMKSHKMTEEAKNEFRILRLRNYIEPGRFYKRAPKKLELPDFFQIGSDKIHASQHFSNRNNAKKNFGEKIREDDETKKSIRERSKAIRDKLKKKKFYKKKNFKKKKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH37</accession>
    <name>A0ABV2AH37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000802</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000153">
        <property type="protein sequence ID" value="MES1918912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="5940" checksum="D703B5E95F6A2934" modified="2025-10-08" version="1">MIKEKFFGKVWTDYPTILPNLTEKMVLSSAKINDLGCSVDGAFSLLNENDKNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH92</accession>
    <name>A0ABV2AH92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000939</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000190">
        <property type="protein sequence ID" value="MES1919068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12768" checksum="2F20B013ED9728EF" modified="2025-10-08" version="1">MVKLSKERENIVTAMLIRKSVTILAKMFGYSQGMLLSIMKSDSQRSREIIGIQWRTDFLQFRCVEKCGCIANQVDPKLIPKPSQIFQRVPRGPFLFYCANAWKGFASISKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHA4</accession>
    <name>A0ABV2AHA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000187">
        <property type="protein sequence ID" value="MES1919051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="10356" checksum="66670669885BCF48" modified="2025-10-08" version="1">MSSSDFLNAERNLGLRNVLNSFQLHFDFKEKNEQILFSDILSIKVFSDFKSNINTFADKTVLITNKVLWVFEQCTKFLIVILMFHSFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW6</accession>
    <name>A0ABV2AHW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001139</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000245">
        <property type="protein sequence ID" value="MES1919281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="44"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="26951" checksum="5C92EE6105BE9968" modified="2025-10-08" version="1">MNESNFNLKTIENSPSNQNQAKDSSQKRFTDNQNLSPDAIGNFSEKPSYSRSSLSSHHGLISPIRQMPDLHQKSKSKALPIYNPNTADNSKRVPINPAHKHANPSFEPSAVTRSEIVQIKLVFDPPIVGTKMKAGIDVITDSGKLEHQEDFYDCDVKWFRGIKRICCVKNCAKSAEVQCITCVKLRISQYNSYFCSLEHLEVFEIIKVALAFAQANTRRPAQKVNADEISAMERARRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY2</accession>
    <name>A0ABV2AHY2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ras- protein Rab-8B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RAB8B</name>
        <name evidence="5" type="ORF">MHBO_001150</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the small GTPase superfamily. Rab family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000249">
        <property type="protein sequence ID" value="MES1919295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00154">
        <property type="entry name" value="Rab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050305">
        <property type="entry name" value="Small_GTPase_Rab"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47980">
        <property type="entry name" value="LD44762P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00176">
        <property type="entry name" value="RAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51420">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23066" checksum="E8649C5ACED40AD7" modified="2025-10-08" version="1">MASKTKFDQLFKIVTIGDSAVGKSSVLIKFTEDIFDIDKTATIGVDFKTKNIQIDGKIVKLQIWDTAGQERFRTITNTYYRDSDGIILMFDVTNRKTFENVQGWISNIKKNAPDYISVVLIGNKIDLEEKRQVKTSEGKELAAEHNYPYIETSAFNSTNVQKCFFQIANMVNEKKKSLKIEKPETLKIDDEEALNKKSKKCC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI16</accession>
    <name>A0ABV2AI16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001158</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000251">
        <property type="protein sequence ID" value="MES1919303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12756" checksum="C0BFDBA2D334C04F" modified="2025-10-08" version="1">MATTMPFNKRQISVSYSDPLKFYVCSAYSNNYNSNQITGPFEIIATGDNNETASVSYTVDPKDKGLFLSVPDWSYPTFTLQFAVKNESPFGTILYRRDSRFSINNLTFCKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI56</accession>
    <name>A0ABV2AI56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001216</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000270">
        <property type="protein sequence ID" value="MES1919371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="79" mass="9101" checksum="8ACEBA4BA1159D9B" modified="2025-10-08" version="1">MGIDLDKLKGNKKEEEKEPKSDLESTKDDTKAAKAAIEFMNRRKKKAKAFEKEITEVSGNKSYQKIGEDENIVFYRICD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI57</accession>
    <name>A0ABV2AI57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001197</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000262">
        <property type="protein sequence ID" value="MES1919350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="422" mass="50294" checksum="9C3D19C95067ECC5" modified="2025-10-08" version="1">MHKWRQFEHKPRSLQDVKEVDIFYMDARSPYYFVQMIGSKQIHMARESNFPMEKTWVEFSYFLSQHKNSSIADFHIFIKTEDKIYMLLNPAKFVYRTDFINDEQIGKFNKDTFFDLEKKMLQHLGLERQLSWVANNDIVITQEGKLLLVNLSWKKDNFDEVIDYVSQRAKIEVEEITEFIFPHSIALDCITSLDIFQHIAFFDKKVFVKTVRCSRTGEFYLQTDYFVSGNNDIKKFLQSTGKYTEAEIFVWENKDRDNHNFLLPYSKYSGLTFPYFIRKFDAEDLKKFCTIFIHTIWQLNDEHLYMKGNIDPTHILISSEGCISYLDIENFSSNHEYSHFPNAAKKIADFLKINVTDENLTGDSEYQSFCNLLRDEKVTTQDIKNNVYFMKDWAKFYFFIKSVSPKNLMRLSGEALKYEKYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIU9</accession>
    <name>A0ABV2AIU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001394</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000333">
        <property type="protein sequence ID" value="MES1919590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="14"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7897" checksum="38B835251E415D56" modified="2025-10-08" version="1">MSEINRKKSIAKAIELAEEERSRRISEIENAKRESKFYSDFSSRVTDLKEEIARKEKTENKMDSLTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY1</accession>
    <name>A0ABV2AIY1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">RNA-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001441</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000354">
        <property type="protein sequence ID" value="MES1919645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1060.10">
        <property type="entry name" value="Zinc finger, RanBP2-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041591">
        <property type="entry name" value="OCRE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001876">
        <property type="entry name" value="Znf_RanBP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036443">
        <property type="entry name" value="Znf_RanBP2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13948:SF3">
        <property type="entry name" value="FI21118P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13948">
        <property type="entry name" value="RNA-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17780">
        <property type="entry name" value="OCRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00547">
        <property type="entry name" value="ZnF_RBZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90209">
        <property type="entry name" value="Ran binding protein zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01358">
        <property type="entry name" value="ZF_RANBP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50199">
        <property type="entry name" value="ZF_RANBP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RanBP2-type" evidence="10">
        <location>
            <begin position="111"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="9">
        <location>
            <begin position="175"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="292"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="638"/>
            <end position="671"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="314"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="341"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="641"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="657"/>
            <end position="667"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="723" mass="82264" checksum="F008A4A50666F8C7" modified="2025-10-08" version="1">MSDYSGIKTNKPYFGNPTKKVVIREIDMFITEEDLNNSVARFTGATVQIQPPPYHELALAEFASAADAKVFVENREDPGVVSVKGKTLYLDYFQKGEDLDFFVAAKKRAKKHTDWVCKNCRYKNFARRDSCHLCQSPREVAEAKPLDGMPILLSRKFSADSMEHNIFRYGIFAREVLSVSGFPPETEKDNIRYTFAPVAAVKAVSVRKVPGSPPMAFVEFYDSAETDSVLRQHGETPFELLGGKLVLRLARDLPKDLKELYDVKLRLREKEAALRFDKDLTEYVRDTSSRVSTDEVSAWHRKHEKKDVDSERRSKSHRSHRRRDSSHKRRSRNYSESSDEQNDKRRVKTKNDEKTERRQNDLERNENSEKSKTEERFVYDAQSGFYFDGKSGYLFDPVTQIYCHAQSRSCFEWNAAKNEFEATAKVGRFGYIVEVANQSNPNVSVESTSVKIINSAAPLPLRAESLKRPRPSHAIPLKTPVAFKPQKQVASALLSERSSLQKTERRDKVQKFSKFGRVAKKATQLRDVAKATKIGHGVVVGHGAAAEHIPKPPSSAPIESEKTKLPVVSKFVADTKQLTGQLEFSGKKDFFDYERIACLLCKRGFKSLETMKRHAKQSDLHKKNIKIFEIKKAARDKTLKNTKSALPNNKSNLGNGNERDGRDERYRSNMQNKLKQRYLDSKVSHRKLETLSNSGKSDYAQQVRILNAQSCSNKDGTPNAIVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ33</accession>
    <name>A0ABV2AJ33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Threonyl-tRNA synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">MST1_2</name>
        <name evidence="5" type="ORF">MHBO_001317</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000308">
        <property type="protein sequence ID" value="MES1919494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.20.10">
        <property type="entry name" value="Plasminogen Kringle 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000001">
        <property type="entry name" value="Kringle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013806">
        <property type="entry name" value="Kringle-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038178">
        <property type="entry name" value="Kringle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050759">
        <property type="entry name" value="Serine_protease_kringle"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261:SF7">
        <property type="entry name" value="KRINGLE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261">
        <property type="entry name" value="PLASMINOGEN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00051">
        <property type="entry name" value="Kringle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00018">
        <property type="entry name" value="KRINGLE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00130">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57440">
        <property type="entry name" value="Kringle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50070">
        <property type="entry name" value="KRINGLE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0420">Kringle</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kringle" evidence="4">
        <location>
            <begin position="110"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="139"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="143"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="20031" checksum="0F89B8B302C662D9" modified="2025-10-08" version="1">MGWPDKNQNAEYVCQRYNRRLCSSKDLEILAYTQKRGFCLLAWAFDIRFKKVRGFLTNTEKMPCFSTTGGTYELPPYGPFPQVFSYTKNVLYYICVIKQSEREREYECSGNGSDYNGYQSKTETGETCQWWEVQYPNKHIETPDNNENPEFKSLQKNYCRNPDNSVRPVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ59</accession>
    <name>A0ABV2AJ59_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">peptidylprolyl isomerase</fullName>
            <ecNumber evidence="2">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pin1</name>
        <name evidence="9" type="ORF">MHBO_001502</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000379">
        <property type="protein sequence ID" value="MES1919720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051370">
        <property type="entry name" value="PPIase_Pin1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000297">
        <property type="entry name" value="PPIase_PpiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10657">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10657:SF4">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00639">
        <property type="entry name" value="Rotamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00240">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54534">
        <property type="entry name" value="FKBP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SMAD/FHA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50198">
        <property type="entry name" value="PPIC_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5 9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="FHA" evidence="7">
        <location>
            <begin position="44"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="PpiC" evidence="8">
        <location>
            <begin position="192"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="139"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="140"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="303" mass="34696" checksum="77683D83D2ECE95F" modified="2025-10-08" version="1">MSTETKSPAPSWATNPKLNTCYLKIIRNGKTIEKNRQISLQKWTIVGRNKRLSDITLLHPSISRQHAAFAHGQSGNLYLVDLGSSHGTFLDGKRIPKDKRNVLSDGNQIRFGASTRFFLVRLADPDLVADNMTTKTSIKTKIENNKNDNENTKNDDENTKNDNENTKKMKKGEIEMPKNKNRKRKLEFDLNKERIRCSHILVKHVNSRRPKSWRQRSITRTREEAKNKIENLLKSLRKDPKNFVEIAKTESDCSSHVTGGDLGYFSKSRMQKEFEDAAFALSKGSISEPIETKSGYHLILRID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJD4</accession>
    <name>A0ABV2AJD4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">signal-recognition-particle GTPase</fullName>
            <ecNumber evidence="10">3.6.5.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">SRP54</name>
        <name evidence="13" type="ORF">MHBO_001304</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>GTP + H2O = GDP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="3.6.5.4"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="11">
            <dbReference type="Rhea" id="RHEA:19670"/>
        </physiologicalReaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GTP-binding SRP family. SRP54 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.4" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000303">
        <property type="protein sequence ID" value="MES1919478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17875">
        <property type="entry name" value="SRP54_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.140">
        <property type="entry name" value="Signal recognition particle SRP54, nucleotide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.30">
        <property type="entry name" value="Signal recognition particle, SRP54 subunit, M-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036891">
        <property type="entry name" value="Signal_recog_part_SRP54_M_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004125">
        <property type="entry name" value="Signal_recog_particle_SRP54_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036225">
        <property type="entry name" value="SRP/SRP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022941">
        <property type="entry name" value="SRP54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
        <property type="entry name" value="SRP54_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564:SF5">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE SUBUNIT SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02978">
        <property type="entry name" value="SRP_SPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47364">
        <property type="entry name" value="Domain of the SRP/SRP receptor G-proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47446">
        <property type="entry name" value="Signal peptide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00300">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="8" id="KW-0733">Signal recognition particle</keyword>
    <feature type="domain" description="SRP54-type proteins GTP-binding" evidence="12">
        <location>
            <begin position="269"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00035672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="508" mass="55693" checksum="2D472400E94A33F2" modified="2025-10-08" version="1">MVLAELGGRLTNALKNMRRSNVIDKETIDNLLKEFGDALLEADVQRKLVVRLKVNIKKAVNSKSLETNANKRQFIEKTCIVELNKLLDSDKKPFKPKRKESNVVMFVGLQGSGKTTTVTKVAQWYKSKGWTTAIVCADTFRAGAFDQIKQNAMKIGVPFFGSYSESDPVVIAVEGVERFRSDEFEIILVDTSGRHKQEDSLFAEMTAISTNIEPDDVVFVMDSTIGQSAFEQAEAFGQAVSVGSVVLTKLDGHAKGGGAISAVSATQCPVSFIGTGEHFDDFEQFSAASFVSRLLGKWDVEGIVNLYNESKVDIDEPELMKKLMRGKFSLRDMKGQLQTILNMGPGLIRMIPGLGKMMPDDAGEKSQTVIKQYMTLTDSMTDNELDGDVKTLNDSRMLRISRGAGLQIAVLKNLLSAFKPFKKLGGNLGKIANKTGVSDLNKLSSSQLASAIDPGALKNFGGKKGFEQLINDFKKMDPEQMEEAVSKLKGKVGNMRGMSGRRGRRKAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM5</accession>
    <name>A0ABV2AJM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcription initiation factor TFIID subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">TAF1_1</name>
        <name evidence="5" type="ORF">MHBO_001613</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000424">
        <property type="protein sequence ID" value="MES1919858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04369">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040240">
        <property type="entry name" value="TAF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900:SF0">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bromo" evidence="4">
        <location>
            <begin position="381"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="392"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="393"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="520" mass="60214" checksum="A4DC2B7F80B76CDE" modified="2025-10-08" version="1">MIKRKSDDEDLRKISKNDAVKVLRKMGVQPNDLVAMTRWDLVSLIKELSTEDDEFAKYSRAHLDKKSEYAKNLNRIFSEHLRFLQNKSSTQKAARELDEMFGETGFKGQSDVVETDEEESALAEKVVESLMKGEDFKSENLSENQKLGNAKSIGKNGKRYKRVLKKRIILTICRPVPGRDPFVEVITDRDKILSYLDSKRAERQKELESLPHHEKMQKKEEIEKIRVEQLKKLELNRKNDLEKERKAIERSITNSHIRCTECGMRGHIKTNRSLCLKYLSNVEEEKSNSVEPSLVDNSSGDTIRINTAKVTKAVSVTKKKGKKRHIDLLNAIDEGVDLRNQRDPCIEFRNILVAILDRTRKALPIEAALFAESIPRENSTYHSVVTNPMSLSDIKKRAENSSRPYSRNEEGKRRREKGLEIRYTSAEEFLRDVELIFRNALLYFGPRAENRNSERAYRLVNFIKKALIPHLETISELSAEIHEAEKEQKLLDRLKIVVETMIASKYSFYFKQSPLSVFII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM9</accession>
    <name>A0ABV2AJM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000359">
        <property type="protein sequence ID" value="MES1919664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11537" checksum="0D266DBD2CB4489E" modified="2025-10-08" version="1">MYKLFTNDKKLKPGIAYKIIDLETLNSSPFESFGNFPDFSANKIENALSNNSFNDRLELKNVSKKLKITKKFFFVFLKIFLGERAQRFGFQSVNGPNNES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS2</accession>
    <name>A0ABV2AJS2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">FRIGIDA-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000444">
        <property type="protein sequence ID" value="MES1919922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="352" mass="41643" checksum="68DAC8AAAB7C3A0D" modified="2025-10-08" version="1">MFNFRKSKKKSERESEKTKEAEEKAKELIEMKEKHRVDHQRCKDLEISLAIEKDELKKAKESFERLKEKMEQDLKMEEDKTKETIEKLKNAEEKALKTENTLKNINETLFVAKEDKKEYEKKAEIMESKMAEISKNLEEKVNENDGLLKQNESLTKTMEQLEIGKNDLENKLKPLNESLRKEKLLRERAERRMESYLPKSKMCDVQNQQQYQLGETIINIQRLIGILNSQLSSREIYANYTRHLEHLNPNTTLEQILTYQASKESQLETIGLCSWYANRLLDKLNLQHQLISVLKIKDSIFKFNDNEVCNESYLNTLLANIVYEETEAQDVINNLRQMRANIERKPETTISY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK15</accession>
    <name>A0ABV2AK15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001751</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000480">
        <property type="protein sequence ID" value="MES1920021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1030.20">
        <property type="entry name" value="DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041913">
        <property type="entry name" value="POLD3_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="17173" checksum="E7F8979896730A20" modified="2025-10-08" version="1">MDKEDLILAEIKDIVINQKSKIDPKTIALKFSVDLNFSNRIFSKFIQNYGNKTKTKYLIIGQKKGIETIKISFSPQQTDFDDIRKVQIFSVENPDFSDISNNIWDYENTTDYYNVLLLNLEICQSNFRKNKNWRNFDILRTKVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK60</accession>
    <name>A0ABV2AK60_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Adhesin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001438</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000352">
        <property type="protein sequence ID" value="MES1919642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="504" mass="54655" checksum="920F0C36F841A181" modified="2025-10-08" version="1" fragment="single">TEKLKIGKNEKIVLSGETGEISSEKLLLNGEKGGKAGDILTTGDIKTSSGNIETGGNIVSLGYIKANTLRLGLSSEVPTNSGEISSNFISVSDGGSEKIKLHGHAAKISIEDSGEEKIVLDGKTGTIKLKDGKGQKTTLSVDNILEDTTVNDLTIEGKNSFFKIQEGNAGNEDYVYIDSKAPKLKMVNRQGFSDVNSVELNSMSKGSNSAEISADETFGKFIRAKSEMAFGISRENDKGYINMKGDESEIIMDPNDMSIKMIKKSKEIKLDVEKEASINIEDSKNSISFGAGNILLFENGNDTTVIEGGVVQLSFDVQNKVNGDKMAFLNEENILLRNRNRVVTMNSSVISIGNSDIGTETKFTGEGDITNGKTFIETREEKIDVFTEKFKLKFLGGKVSFSEGSQSFDTEEGYSASFGNNTMELTSGKIKFGNENKTMKYSVDNNNLNLSEEKGEININGAEGLFIKSLERKQAITANALEGIKVFKPDSESSHLKPKGIKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK92</accession>
    <name>A0ABV2AK92_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">L-seryl-tRNA(Sec) kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001462</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000362">
        <property type="protein sequence ID" value="MES1919672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013641">
        <property type="entry name" value="KTI12/PSTK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052648">
        <property type="entry name" value="Ser-tRNA(Sec)_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20873">
        <property type="entry name" value="L-SERYL-TRNA(SEC) KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20873:SF0">
        <property type="entry name" value="L-SERYL-TRNA(SEC) KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08433">
        <property type="entry name" value="KTI12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="306" mass="35963" checksum="A3A25145D7329B1C" modified="2025-10-08" version="1">MSKLVILLIGIPGAGKTSLANKIKSQIKNFDLCRIDETVNVKIISYDSIEKELMAQNKFQPNFYQNLNSQKFSNKIDSSILNKPKSNKNNDFSKIWKQTRKKAFEMFKNLNSTSKNIIILDDNFYLFSMRKPFIRYCAVTKTPLILIYLKTDFKTAKIRNELRTETESVPEDIIDKMFDKIKINKIEKTNTLIIENNTKNGDFEKIKIFIEKSFRKQNFPIFKTGKIEKNVKLEKTPSQLLDLKIRKLINKKMLQIKKTENKVNFAKFSALEKKKFKRKLDQINLHQTDFDDLIKNFSTGLNKFFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE4</accession>
    <name>A0ABV2AKE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001849</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000527">
        <property type="protein sequence ID" value="MES1920135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="418" mass="46808" checksum="9D0D75998B1F4C4D" modified="2025-10-08" version="1">MIIYHLSNLSNSETDQQLKSLLRSSETDFRLALALVDRPFHNPALQQQANILSADLAQKLSDFEALQRSYLRVVQMAASNPQVGYIVLSLAPSLADWRLFYRMASVMEEDYKKISDAANTPANAAPNVSEALHQMAENGMPDLGVLYEQLKRACPDGAGKADFPSAPKPDKLFQQTVWIKKTEICLERVMAESPEREEEIRKEFEENRDNEVQMENLSISVNGGLLVMPGLSKEVPQILYGPYSNEHRLEAEAYTDLQLQETDEKGELKTNMSSEEMYAELMNNMPPQVIEAINSGELTPEQMIKTISSGGSDPVSGNPELWRSLNEFTRSFQESGSDMMKKYGLSLVRQHERLVLKKVEGGYEGTYSVRNFNPTAPEVETSVEFALHFDCEHLKSPPVTFESDVDKVASGVDGLVLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN1</accession>
    <name>A0ABV2AKN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Trehalose synthase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001906</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000553">
        <property type="protein sequence ID" value="MES1920215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049438">
        <property type="entry name" value="TreT_GT1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21269">
        <property type="entry name" value="TreT_GT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Trehalose synthase N-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6849" checksum="34D8D2A04BCF4B1C" modified="2025-10-08" version="1">MRPNNARFMREFNIDGDWAVIDGCEDFYNATVHIHEGIQNPNYSPLSKKVYKLLLMFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN2</accession>
    <name>A0ABV2AKN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001937</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000569">
        <property type="protein sequence ID" value="MES1920246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15665" checksum="3F6843CC6E12FB87" modified="2025-10-08" version="1">MLISLFNDWVNAALSTLEDLLRTNLYSKIGKRRNSELREKSELRMLRRKFRQIERKCLEPTTFDYKADLQTVSDILFRLKGEDHLKLARFFLRDIKGSEQMCMRRMQARLRDSLFRYYHQKMSYEKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ6</accession>
    <name>A0ABV2AKQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001908</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000553">
        <property type="protein sequence ID" value="MES1920217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19799" checksum="E7F391AA2A4AC3BB" modified="2025-10-08" version="1">MSTSLTIISSLCLEVSQILSKIVFLKISTRLWSLSDNRKMRSRRVSMPFSSRILRFLVKFFRFSKIWAPLGLSPGVDAAKTKRKLSFRKFSSIIFGSSSRIASMKETSTSKGPLYGSYLETSRMYGGTMWSQGDEFKVLRLFLVNLLMFGIIAIEDERSLIWYSSSCFSALIIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ8</accession>
    <name>A0ABV2AKQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ribulose-phosphate 3-epimerase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001963</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000581">
        <property type="protein sequence ID" value="MES1920276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000056">
        <property type="entry name" value="Ribul_P_3_epim-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11749">
        <property type="entry name" value="RIBULOSE-5-PHOSPHATE-3-EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00834">
        <property type="entry name" value="Ribul_P_3_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="Ribulose-phoshate binding barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="208" mass="24047" checksum="534922A649DD950D" modified="2025-10-08" version="1">MSTVLNKISVSLLGCDLLNIEKELDFVKSLNINRLHVDIMDGHYVENFGFPLSIVKLIKSKYKNYFKFDFHLMVDNPLFSTQKIFSDIDYENLIYHFDTVRNVSNKIGDKTKIKIAFRINDDFGDIIKFIKTKNFKKVVLMAADIGKSGQEMYCDVIDKIKMVKMQIPDVFLEIDGGINSKNIFKVLENGADLVVTGSFFFQNKHFFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR7</accession>
    <name>A0ABV2AKR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001958</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000579">
        <property type="protein sequence ID" value="MES1920271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021183">
        <property type="entry name" value="NatA_aux_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22767:SF2">
        <property type="entry name" value="N(ALPHA)-ACETYLTRANSFERASE 15_16, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22767">
        <property type="entry name" value="N-TERMINAL ACETYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12569">
        <property type="entry name" value="NatA_aux_su"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="87"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="420" mass="49186" checksum="3F9BC938E9F664E5" modified="2025-10-08" version="1" fragment="single">MVVGQINSIKSDQNIKPRFGKMVKQAINYYEHKLYKKGIKECNNVLKVYPFNSEATCIKGLLLFSIGKKEEGSNLTKKGIGFNVKSSVSWHVYGLLRRLEKNLNMAIKCYQNAKKIDPSNILITRDLSILQLQTNDVKNFQKNSLHVLKLLPGNKTQWIASIVAVYLNNDFDKTKEMLKTYLTTLDTNKVHKKIEIFELKAFEAKVHKKSGSPQEYLCFLEENDKILQTDRLFYYKQKTKVLLELGKHKKCENCVLELLKIDPNDAFAHETLIKLQKIDDFRDENYQFLKENVEKILGKWPKLTAATSFYLDFLRLDDFKQYFENGFERIFKIANFWEILKGVLAANKVKKQFLKNYLNEKMAKFDEVENNDKFVNCVLMLCRLYCSEREYVKAEEFLENKMAKIGENLNMNSLMSKIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY7</accession>
    <name>A0ABV2AKY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000610">
        <property type="protein sequence ID" value="MES1920323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11414" checksum="CDAFAACC8BEDD68E" modified="2025-10-08" version="1">MLRFCAENKVWTENKTFEFFGSILLEAQKDICFAGVHIYKLLIVLLEEGIEMPLTLIAVLVENCMSGVDKIGPVEFKTIALCQKFLLLASEKVLFCRFLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA1</accession>
    <name>A0ABV2ALA1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Triosephosphate isomerase</fullName>
            <ecNumber evidence="4">5.3.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">TPI1</name>
        <name evidence="5" type="ORF">MHBO_002115</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>D-glyceraldehyde 3-phosphate = dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:18585"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="5.3.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the triosephosphate isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000676">
        <property type="protein sequence ID" value="MES1920447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004807">
        <property type="term" value="F:triose-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00311">
        <property type="entry name" value="TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035990">
        <property type="entry name" value="TIM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000652">
        <property type="entry name" value="Triosephosphate_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020861">
        <property type="entry name" value="Triosephosphate_isomerase_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00419">
        <property type="entry name" value="tim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21139">
        <property type="entry name" value="TRIOSEPHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21139:SF2">
        <property type="entry name" value="TRIOSEPHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00121">
        <property type="entry name" value="TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51351">
        <property type="entry name" value="Triosephosphate isomerase (TIM)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00171">
        <property type="entry name" value="TIM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51440">
        <property type="entry name" value="TIM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="4" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="3 4 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25338" checksum="A3A49E72C866199E" modified="2025-10-08" version="1">MDNSRIFIGGNWKSNCSLEKAEKLTKELISELSKMDKNMKENKYVVISPPFVYLKEINELVKRTKFAKFNFAVSAQNCSETGNGAYTGEISTEMLKSIDVKWVIVGHSERRSLFCENDNTIAQKISLCMKEKLSVIACIGETLKERKNGQLEEILNRQLEGIQNSQNLDWSKIVIAYEPVWAIGTGEVATPEQAQKVHCFIRKWLNKRVSPEIANTIRIIYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB9</accession>
    <name>A0ABV2ALB9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PPM-type phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002127</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PP2C family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000684">
        <property type="protein sequence ID" value="MES1920462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000222">
        <property type="entry name" value="PP2C_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01032">
        <property type="entry name" value="PPM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="6">
        <location>
            <begin position="22"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="318" mass="35638" checksum="A5DFABA2BECF9BA0" modified="2025-10-08" version="1">MNKAPRTNFFPLKAKDPVIAIETGAFSDKGNKAENEDRFVIFEKLSQFSDEENNSPFRKHSYSFFAVYDGHGGSASAQYLETHLHHNLIEELHTVKDFSSDADPNSPEHIEFVKEVLVNAFLKTDRDLLEELKRRGKNDGSTAVVCLLVDDVAWVANVGDSKAVLTRERGKRPLKIGRLSKDHSPDFLEERRRIEKRGGFVKEGRVLGRLAVSRSFGDPTLKQYGVSATPYVSRVQLDAKRDSFLLLGCDGVWSHMAIKETVDFAHGELLDFSKPSAREVSRRLVKHAVMSRGAADNVTVVLLKIAGNAEEEVIKKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALE4</accession>
    <name>A0ABV2ALE4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002156</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Lipid droplet</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AB hydrolase superfamily. LDAH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000701">
        <property type="protein sequence ID" value="MES1920492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019363">
        <property type="entry name" value="LDAH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13390">
        <property type="entry name" value="LIPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13390:SF0">
        <property type="entry name" value="LIPID DROPLET-ASSOCIATED HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10230">
        <property type="entry name" value="LIDHydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0551">Lipid droplet</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="309" mass="36256" checksum="F396BA00CBA3B79B" modified="2025-10-08" version="1">MAKILKNINSQYLKFEQNELGTSELMELPSINIDNEEYIIIMSPGNPGIIQIYQKFLESIYNLFNQKYKIFGLGYLGHSKIDLNRQKIYTVEDQIKNLELFIEKLIRKYTRKVKIVLIGHSMGAYINLKVIGNRPDFPIVYSMNLCAVLCKFSLAMLMKILSFPYLRRISSFLISKTPEFLKSNLASFLLNVKSYDEIMTSIEYSNNFYFLENALCTSDNIQNILRNDIPSEISETIKKNNEKILFVHTLNDYYVTDDVFEYVKYALHFANFVIIPEEENVNHAFIKNENYKKVTKICFEHLNRKVLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK3</accession>
    <name>A0ABV2ALK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002041</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000631">
        <property type="protein sequence ID" value="MES1920364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="42"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="131"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="161"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="194"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="209"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="257"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="316" mass="37838" checksum="1A9FEEA43E8F0A46" modified="2025-10-08" version="1">MPEKRFRNKVFKSADRLVSWFKSHPYENSPYVKRKSAPKNYNRNEHSRNHDRDDGYNNRRANFRNRVDFDSRNSSQRYQQPNRYYSGNKNFDDDSHRNFTKRNYENVNRNFGRNEKNFDNRRFENSHKNVKQSPRYQEPQHQFSRPSPRGYSNRPQNESKNYGDYKRPQNRSHIEKSNYGRRGNYDRRGNNFGHNNSEGYGNNSYRSRTGHDNRRSERDFNDGNRNWNSQKNFAKNGLSRSGDSGKFHNFVSNSPEVDFDQFDQIDNDSGRKRVRDPKRDEKNLVEVPKSDKKQKLGDSVSPEPDFAEFDKIDNDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL5</accession>
    <name>A0ABV2ALL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Box C/D snoRNA protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ZNHIT6</name>
        <name evidence="6" type="ORF">MHBO_002056</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000638">
        <property type="protein sequence ID" value="MES1920379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23023">
        <property type="entry name" value="zf-HIT_BCD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.60.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051639">
        <property type="entry name" value="BCD1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007529">
        <property type="entry name" value="Znf_HIT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13483:SF3">
        <property type="entry name" value="BOX C_D SNORNA PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13483">
        <property type="entry name" value="BOX C_D SNORNA PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04438">
        <property type="entry name" value="zf-HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51083">
        <property type="entry name" value="ZF_HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="HIT-type" evidence="5">
        <location>
            <begin position="6"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12871" checksum="25DD2FF88A8D1562" modified="2025-10-08" version="1">MSFKECKICLNSNAKYKCPKCEIHTCCLSCVDKHKIRYDCNGLRIRKTPNFVDSKNYSQTRETEDIAFLQNISRNTKALSGKAFRILHPKIKRKSWKKKKFRKRRNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN8</accession>
    <name>A0ABV2ALN8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid permease/ SLC12A domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001918</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000560">
        <property type="protein sequence ID" value="MES1920227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004841">
        <property type="entry name" value="AA-permease/SLC12A_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004842">
        <property type="entry name" value="SLC12A_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827:SF72">
        <property type="entry name" value="GH08340P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00324">
        <property type="entry name" value="AA_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="195"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="220"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="276"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="315"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="353"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="400"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="425"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="458"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="482"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid permease/ SLC12A" evidence="6">
        <location>
            <begin position="87"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="535"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="535" mass="58618" checksum="C790B83C446334FB" modified="2025-10-08" version="1" fragment="single">MDSTTKWNIESHRGLLKSSERRPSLAHLLFNQTSTNRKSTLKEILSDKIYSEEISHSSDPSSEQQNFTQMNLLFRAIFLKIGSTGEVLLRGLFSIFGVVLFTRLAPVFGNVGIVFGPILVLLCEAIVFLTVLSVCAIITNGEIHYGGVYFLVSRSLGPRFGFTIGMQFFLANCFSISLYLLGLAEALDAIFQPNFRFFEQVLSIFLLLLVFALSVAQNRVLFVLQIFVVVPLIVVSLICVFVGMAYWQSRGGNPLIAGFSAATIRANVKIPTFAEFFLATGIFFPGTLGVMSGANTAESLEKPEKSMPRGMMSGVAISTFTYLLLGIVMSSSVLGKNLVGVDLILSKIAINKWVVNVSLIASILSQAITNFNIAPNLLGGIVNDNFLRPLKVFKGRHMRLKLQLTVFVISALFILPGSFDIIAPVITAFTVITYTVLNFACFLHSFQKTPNWRPNFRFYNAYVSLTAAIIGIALIFVLDYVAALMALGITVIFAGIAALIKPEVDWGGAIDLVTMSSAIRSLKNLENKKIGAKSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW3</accession>
    <name>A0ABV2ALW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002319</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000797">
        <property type="protein sequence ID" value="MES1920670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001830">
        <property type="entry name" value="Glyco_trans_20"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788:SF106">
        <property type="entry name" value="BCDNA.GH08860"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788">
        <property type="entry name" value="TREHALOSE-6-PHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00982">
        <property type="entry name" value="Glyco_transf_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15338" checksum="EEA4A451CE6D6E49" modified="2025-10-08" version="1">MWNKKISSGGLVSAMSCLKSKMKWVGYVGMDIPKDERPKVKELLFEINCIPVFIKKGSLIKILELYDLYYNGFSNDVLWPVLHYTHILVNTLIKEEEYWNAYVAVNKLFFKAIQENLTDIGSVWIHGTNNNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI3</accession>
    <name>A0ABV2AMI3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000757">
        <property type="protein sequence ID" value="MES1920603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="14960" checksum="96708989DCB5B99E" modified="2025-10-08" version="1">MFTFRLHYPCHNVTNIWMQNNNPAVEETCVCCYKPLVIEDDKLGWEGLKFNGRTALMDGSCSRAQSYYAVGAFCDFNGGVPGFLPARGVERVELYVLPPSFCSNRIFVLAIFTFFIMVTTINDAVVSKNLIIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS4</accession>
    <name>A0ABV2AMS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000984">
        <property type="protein sequence ID" value="MES1920965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9490" checksum="4EB9D06BDCC16A50" modified="2025-10-08" version="1" fragment="single">KIFDPFKEIEKLKRKLEQHRAELCIKEAKLETAEKELLNFKRNDKVLFWKSKTNELQHKNEMLMISLEQKSKKLAEFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN19</accession>
    <name>A0ABV2AN19_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">FACT complex subunit SSRP1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">SSRP1_1</name>
        <name evidence="12" type="ORF">MHBO_002658</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the SSRP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001058">
        <property type="protein sequence ID" value="MES1921060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.220">
        <property type="entry name" value="Structure-specific recognition protein (SSRP1)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013719">
        <property type="entry name" value="RTT106/SPT16-like_middle_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050454">
        <property type="entry name" value="RTT106/SSRP1_HistChap/FACT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048993">
        <property type="entry name" value="SSRP1-like_PH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000969">
        <property type="entry name" value="SSRP1/POB3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024954">
        <property type="entry name" value="SSRP1_DD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038167">
        <property type="entry name" value="SSRP1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45849">
        <property type="entry name" value="FACT COMPLEX SUBUNIT SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45849:SF1">
        <property type="entry name" value="FACT COMPLEX SUBUNIT SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21103">
        <property type="entry name" value="PH1_SSRP1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08512">
        <property type="entry name" value="Rttp106-like_middle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03531">
        <property type="entry name" value="SSrecog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00887">
        <property type="entry name" value="SSRCOGNITION"/>
    </dbReference>
    <dbReference type="SMART" id="SM01287">
        <property type="entry name" value="Rtt106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9" id="KW-0158">Chromosome</keyword>
    <keyword evidence="4 9" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3 9" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 9" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Histone chaperone RTT106/FACT complex subunit SPT16-like middle" evidence="11">
        <location>
            <begin position="236"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="387"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="412" mass="47440" checksum="93609181E9FBC985" modified="2025-10-08" version="1" fragment="single">ANSIDFTSAKRKCFDLYYDDMEQCVATKNDLIIEFKEKDQPFEHESLSEIRFHVPIGEMDNFLSKSQNDDSDATFLSASQLSERIRNRADLTFSPKNAVVKFANQQLITPRGRYEVGLSRDTLFLHGKTFSYKSKLRDFYKMFLLPNDDGHYLAVNLKKPLNFGKTFYHFVIIKFGEDSQITVSVDIPQKEIEEKYDGKLSREMEGPSFRITTRIFKTLSNTKVFMPGSFENTTEQKYIRCAMKTSAGFLYPMEASFVFCPKPVVYVQHSKIESVSFLRLLNSMSSTKMFDLALTLKKDHKNARKDAKIVFTGIDKREFPNLFKFLASKNLRILDKEIYEKRLNLSDAGQRSCRISGATNVILPNGNSDTSSDEDFDETKTLDQLDRKLRETTENIENEEISSSSEIDVDDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN59</accession>
    <name>A0ABV2AN59_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DBF4-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002674</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001071">
        <property type="protein sequence ID" value="MES1921087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.3410">
        <property type="entry name" value="DBF zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006572">
        <property type="entry name" value="Znf_DBF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038545">
        <property type="entry name" value="Znf_DBF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07535">
        <property type="entry name" value="zf-DBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00586">
        <property type="entry name" value="ZnF_DBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51265">
        <property type="entry name" value="ZF_DBF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DBF4-type" evidence="5">
        <location>
            <begin position="165"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="24394" checksum="901926E1216961EF" modified="2025-10-08" version="1">MGIIVHVSDFENIGIIDFYVLRRAKEHGEMVSKINSGRDKTALCSLRSKAIISKIRKIDKKKSEVENAELKKVINRKIAVMTLSELSEIIQNFKKSFSKSVVNAKRLNLKETHFISLNSVDKKFEPIIKIFRKDRNGNCTTPKIYEKAKNCIFLNPERKKSNRKRAQKVGYCEICNVSFVKIETHLKSSGHLKQLTKSKFYEKLDNVLNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANB9</accession>
    <name>A0ABV2ANB9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002727</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001112">
        <property type="protein sequence ID" value="MES1921152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1082">
        <property type="entry name" value="COLLAGEN TRIPLE HELIX REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="155"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="122"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="158"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="267" mass="27270" checksum="75903799C23B94EC" modified="2025-10-08" version="1">MIRMTNYDGKNSFNFHAPPFVCPRTIHLPRIPQIPQICFPCQQHCYAKPYHNEPCLSQPFLPRFGPLYCGKPGPPGPPGPKGQPGQRGPLGAVGPDGDNGADGIQGPPGVTGDKGPEGDYGENGVPGPEGPTGEPGVKGYPGNCGVCGKMGTPGSPGPVGNEGPPGESIPGSMGPPGIPGKQGSPGKPGLLGPCVELPGNPGEAGTKGDPGLPGRIGPQGYPGKIGNRGSPGCPGCPGYPGCPGRFYLRRIINQECEHPDYYQDSCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI2</accession>
    <name>A0ABV2ANI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000973">
        <property type="protein sequence ID" value="MES1920948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="57"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="87"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="17302" checksum="3EB769543B84CA5C" modified="2025-10-08" version="1" fragment="single">MTKRNNNKQTVNGLSTSRGDSSNLGHSITIDDNSAISSQPYGASSFNRKSQHEENRYQNQPLNNVQNGGQYYNSTDEKGYFDPLIQNKNNNFYSNPNNGNPLDNNIGFNRSKPVNFPNFQYQNQNQQTVLTQNSGNGHIDFSYQSLNSGVRGQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANQ6</accession>
    <name>A0ABV2ANQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cleavage and polyadenylation specificity factor subunit 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">CPSF4</name>
        <name evidence="4" type="ORF">MHBO_002850</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001229">
        <property type="protein sequence ID" value="MES1921304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045348">
        <property type="entry name" value="CPSF4/Yth1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23102:SF24">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23102">
        <property type="entry name" value="CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14608">
        <property type="entry name" value="zf-CCCH_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="3">
        <location>
            <begin position="33"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="3">
        <location>
            <begin position="60"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="3">
        <location>
            <begin position="113"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="2">
        <location>
            <begin position="33"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="2">
        <location>
            <begin position="60"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="2">
        <location>
            <begin position="113"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="18442" checksum="8736FBC4D1F6D31A" modified="2025-10-08" version="1" fragment="single">MLFEKKEVEDIKLDIDSFVNILVKHRALLHEHARQQLCMDYQKGSCPNGPLCNLRHARWKRDTLCKHWLRGLCKKTEFDCEFLHEYDLNKMAPCQFFEMYGECHNPDCLFLHQENFKECTWFVRGLCKHGPLCRRKHVKRRHCPDYLAGFCPKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS5</accession>
    <name>A0ABV2ANS5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">G-protein alpha subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002583</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000993">
        <property type="protein sequence ID" value="MES1920977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF302">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-5 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0807">Transducer</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="88" mass="9997" checksum="F3A71C23D737469A" modified="2025-10-08" version="1">MGTCGTKLSKEEKKQLMISKQIDKKATDDFKTVDEAIKVLLLGPGESGKSTLLKQMNNLYSKGYDEDETRSFIHIIRENLLTTFQVQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW3</accession>
    <name>A0ABV2ANW3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002895</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001278">
        <property type="protein sequence ID" value="MES1921361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052094">
        <property type="entry name" value="Pre-mRNA-splicing_ERAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44313">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44313:SF1">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="7">
        <location>
            <begin position="14"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="102"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="33134" checksum="141F8F9C7A5D1B48" modified="2025-10-08" version="1">MTTNLTLKDCEDKNYYELLNIKLNSNLQQIKKAYKKKALEVHPDKNVGNPNAGKKFAISSKNIQERFCGVHSSFGPVEKTSLRRKIENGVFFENKIDRKERQQRLSKETRQMRQMREKLEKREREAEKSQKFETETEIAKKKIEKEIERIRNKLRNDDKNEKLKSNKPLEADKILKVEFRKPETKENLKLIFNHYGKIDKLILKTRTAMICYKSKESVKKALDDEELNDFDLKVTSLQTNKKKREHKTDNLSKFCLLRDPQLSFTEYENFVIDLLSKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP21</accession>
    <name>A0ABV2AP21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002818</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001202">
        <property type="protein sequence ID" value="MES1921264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12992" checksum="F1210E8287F872C8" modified="2025-10-08" version="1">MVLGGINNVVFKRFFEDDFSFQNKKMRKTEEEKYFDESDSEESDSGTANESENEKNEKFVERPKIEKMEKKEIDLCRFAKKEFNNEKKDFSKEKFSFRLKSDNQKNAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP71</accession>
    <name>A0ABV2AP71_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">G-protein alpha subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002997</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001376">
        <property type="protein sequence ID" value="MES1921466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.400.10">
        <property type="entry name" value="GI Alpha 1, domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011025">
        <property type="entry name" value="GproteinA_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF302">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-5 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00318">
        <property type="entry name" value="GPROTEINA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00275">
        <property type="entry name" value="G_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47895">
        <property type="entry name" value="Transducin (alpha subunit), insertion domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0807">Transducer</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="213" mass="24154" checksum="F731B034F6F93BCA" modified="2025-10-08" version="1" fragment="single">MVFCRPSFTKEQKEQMLVSKHIDLKAAAEYRQIDNSVKVLLLGPGESGKSTILKQIHSIFNNGFDDDERRGFVPIVRENLFTAIKTLLEMTDVLAERGLKGTKISKKSEAIKNEILNFCSVEEVTDWKKVNFGFCNKTSKLWTEEKGLKVVYENRSMYHLTGSGDYFIRKAVSIGSSEYVPTILDVMSARIKTTGISEKFFKIGSNGFRVFDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP74</accession>
    <name>A0ABV2AP74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003012</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001403">
        <property type="protein sequence ID" value="MES1921482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="136"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="315" mass="37301" checksum="8ECEB9DD2AD1999F" modified="2025-10-08" version="1">MYQYFCSLWDSVKSFKELNISSQKESLTNNLCENYYEKSLETFRLSQNDLIGADIDNFAKIGGQIVSKAMGSFDEKAFPSGFRTANNKNKSNTVMENGEEIDYIDQIRYKWRKKLLGAIALQVKEIQKSKIDQLLVQLTERYKNELEKEMTEKNKTINDFGKKREETLVATKRAFAEGVLKLSIKEYVEVQLDKTIVEKIMNEMVRKVDLFCFEVLSRLFEDSLIRMTKEKLYLIRKTIRGGKQKMWGTIHEQRTDLHKNANFHIARFEKIWPDNKDFCSKWDNFRNNIQKRVLEEVVDELVRQSDFIYQILNER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APA3</accession>
    <name>A0ABV2APA3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DNA helicase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002791</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001173">
        <property type="protein sequence ID" value="MES1921233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050615">
        <property type="entry name" value="ATP-dep_DNA_Helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032830">
        <property type="entry name" value="XPB/Ssl2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11274:SF0">
        <property type="entry name" value="GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11274">
        <property type="entry name" value="RAD25/XP-B DNA REPAIR HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13625">
        <property type="entry name" value="Helicase_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase XPB/Ssl2 N-terminal" evidence="6">
        <location>
            <begin position="43"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase/UvrB N-terminal" evidence="5">
        <location>
            <begin position="237"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="321" mass="35953" checksum="D07B445EDA93CEDA" modified="2025-10-08" version="1" fragment="single">MLYKHLKFFKLVFKLFTQKMEEETQSDYSHLKLRTGHNDRPFFVCGDGHIFLETFSPFFKEAYDFCIAIAEPVSRPKHIQEYKITPFSLYAAISVGLTCPEILAALRKLSKNELAPELVTDILNETAKCGKIKLVLRDGRYFVESPFQNCLRELLFCPDIAAAKTSEGIERRFAAKGERDAFSAGHESVFSFQIDAEKAESVKRGCRDSGWPSLEEYDFRADETAASLCARLRSDTNVRPYQQKSLGRMLGNGRARSGIIVLPCGAGKTLVGISAACTIGKSVIVLATTGVSCRQWKEQFLKWTDLGGNKVKLFVSSLKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APY1</accession>
    <name>A0ABV2APY1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cold shock domain-containing protein E1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CSDE1_1</name>
        <name evidence="7" type="ORF">MHBO_003264</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the UNR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001695">
        <property type="protein sequence ID" value="MES1921735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12913:SF1">
        <property type="entry name" value="COLD SHOCK DOMAIN-CONTAINING PROTEIN E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12913">
        <property type="entry name" value="UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Cold-shock" evidence="6">
        <location>
            <begin position="20"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="Cold-shock" evidence="6">
        <location>
            <begin position="187"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00044751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="306" mass="35545" checksum="C5927CADAF404415" modified="2025-10-08" version="1" fragment="single">MRFYDQRPLTERSFNDRREKGQIVKLKSTFGFIRTLNRSEEIFFHLNCVETLSNGEIPMFSVGDNVAFSVNIDRQNGRLYANNVRSIPTGSVIFEELLENEGRKKAVVTKEIGADSIGDGRTRFSGELRVEKDGETLRFRRRDLESKQIKLLKGDKVEISVFVDKKTRRRGATQIVLKEPSLENREYGVVGAIINSSYGFIKCADRNDPKLFFHFSERLQEDYFPKEGDNIAFNVTKDRNDQLCAMRLELVSPESVKFVKILRPIFNGTIMTSLKWFPKEERWEEGQITFKTTLVNRQVNEFLPFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ53</accession>
    <name>A0ABV2AQ53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003333</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001781">
        <property type="protein sequence ID" value="MES1921798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9023" checksum="6C292C523DE63703" modified="2025-10-08" version="1">MSHKKLDADLREKCGRFKVFLTSSSDGLISEDIHDSAVTLLLMKKIFEKPLFGEAKFDEPNYNIDTNGLRRSKRNRFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQB8</accession>
    <name>A0ABV2AQB8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001865">
        <property type="protein sequence ID" value="MES1921860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF3">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0865">Zymogen</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="14781" checksum="59C1C32578100BF3" modified="2025-10-08" version="1">MSLHKQKAPLNSTIPLPPKNYHKIIDIKQNRKPDNKQYLSFARNPFSPKSFENPIEPAIKYAHGTTTLAFKIKDAVIVAVDSRSSMGSSYISSNNVKKIVPVAKNILCTIAGGAADCMYWARYVGVQVFSLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH0</accession>
    <name>A0ABV2AQH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003446</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001939">
        <property type="protein sequence ID" value="MES1921918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052431">
        <property type="entry name" value="SKI2_subfamily_helicases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44533">
        <property type="entry name" value="DEAD/H RNA HELICASE, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44533:SF4">
        <property type="entry name" value="DEAD_H RNA HELICASE, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="133"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="266"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="133"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="33754" checksum="504F885E1FFC93C6" modified="2025-10-08" version="1" fragment="single">MRLENFEMAKNKESTLISINPLAAFRLAVCTEENFVLPEISLSSRDCLRVYDAMTKTLKELKKEENNDKTITEIKALDPEKYFKSPCITKNQVTTYGKELKKLISTWHRQGNWNLVDKVLISLSKNLLDKIKKMESQEQKHDSENPTKQTKSPKKKQKKDLLKNLKLSPLPKTTLKRYDGPYSDDFLLRQIVPLLVEMRNNSDLPAIVFGGSQKICDAMLLETLKYLETNESFVISKNDLKERKRAQKDKLKKMKAWKRERDRIEKKKEEEMLRDGTIPDEINADEDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH4</accession>
    <name>A0ABV2AQH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transforming growth factor beta-1-induced transcript 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">TGFB1I1_2</name>
        <name evidence="9" type="ORF">MHBO_003196</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001609">
        <property type="protein sequence ID" value="MES1921668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08368">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.40">
        <property type="entry name" value="SH3 Domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050604">
        <property type="entry name" value="PDZ-LIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036028">
        <property type="entry name" value="SH3-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001452">
        <property type="entry name" value="SH3_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24214">
        <property type="entry name" value="PDZ AND LIM DOMAIN PROTEIN ZASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24214:SF38">
        <property type="entry name" value="PDZ AND LIM DOMAIN PROTEIN ZASP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00132">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50044">
        <property type="entry name" value="SH3-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50002">
        <property type="entry name" value="SH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0440">LIM domain</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0728">SH3 domain</keyword>
    <keyword evidence="3 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="SH3" evidence="7">
        <location>
            <begin position="9"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="LIM zinc-binding" evidence="8">
        <location>
            <begin position="76"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="LIM zinc-binding" evidence="8">
        <location>
            <begin position="134"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22097" checksum="D62A9D5BC6199867" modified="2025-10-08" version="1" fragment="single">LHKLKFRIMEPFKVFAIKDYSPQKDYEIMLQAGKIYTVDKQEENSYQVVSEGGRCGWAPSDNFYLLKTVEKNKSGKSCNLCNKTIEEDYITSDEKDYHTKCFECAGCKKILIGLPYINNNDNIFCESCSKENDKICADCNEKISGTYVTALDKYFHPEHFVCSHCKKQFTETYHTIMGKALCSDCFNAQTNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK8</accession>
    <name>A0ABV2AQK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003483</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001989">
        <property type="protein sequence ID" value="MES1921958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10299" checksum="B498F23C83E8F7DB" modified="2025-10-08" version="1">MHGVEICDSMTNTYTVKEFIELLPWPNEEKLDKEALIEKYVKKLKAANSENKGDPEFAHIDADNALIDLLNELGLEKVADAYNEIDKWFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS2</accession>
    <name>A0ABV2AQS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001813">
        <property type="protein sequence ID" value="MES1921821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="29832" checksum="1BEBCFACB1C019B9" modified="2025-10-08" version="1">MIESINGDSYLQGINRFHALLLAKRLIQDLSYDCERELRVYEAEISTANKVIPPVDFVDFVRLSLVSPSGILLPLFVNKKLNISQKYIKDQDGEIIVDNLGYPIKAQGTRSSEVSNGSKKYWLASPTVDGDFIYDNALYGIKGGQQSYTGAYRYDSQAREFLLDGIPSEFTHVVIEYLSDPIAAEKDPRKLRIHKYFQTALEAGIYHRYIDKLRNVPRVEKESARREFYNEVRKSQRRMFTKPGEIIQKLGSDVGYNKML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR21</accession>
    <name>A0ABV2AR21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003398</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001868">
        <property type="protein sequence ID" value="MES1921863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="302" mass="35276" checksum="49D6812FB5605A8C" modified="2025-10-08" version="1" fragment="single">VSAKIKHFKDKNFYGLYDFKAFQLTNHKIPLEGIKTKMRLEISVNDKRSLCGFIHIIVYPGVPKRIILKSTDLKIINHSNVRNIEFGLVDEFMNSTNSSFGVSSLIFQSLNSRKVFGHFKTPLERLEDGHTFCLRDFPVTLNWEKIPKEFVSEGKLNVPFEVFAKHNEQRNMKIRHLDASFDVFPSDQITKLYLCHSLDEFTPGISKFNVEVGKLNRIYVVFESERGDIYKNIKFEQIKNFKAKLFDDNVCNLKTDEEENLVIEMDVPKKIDGIRNCYAECVLKQCPNRKLKKFFKINRIYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR23</accession>
    <name>A0ABV2AR23_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Lin1244/Lin1753-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003634</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002243">
        <property type="protein sequence ID" value="MES1922120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025400">
        <property type="entry name" value="Lin1244/Lin1753-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14297">
        <property type="entry name" value="Lin1244_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lin1244/Lin1753-like N-terminal" evidence="2">
        <location>
            <begin position="4"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="114"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="114"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="24949" checksum="0415CE9F0DAD835E" modified="2025-10-08" version="1" fragment="single">MIKFFRHNSTASEEPGLKYLRVKFGWEGLGKYWALCELISKQDNCTIDVSKKFNLIAIASTLEMEIDEFLAFKDFCIECEIMVCDGDIVSVPCVSEGLALSDAVKERNRKYYNKKKDLPKQESKPKQEPKPKPKPKPKPKAKDERSKALLSNCDHSLLEEDEEYFKIAKSFWNLFISHHGTNKMVLNNAKYDKWVDSVRLMMQRDKRTKEELRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARB1</accession>
    <name>A0ABV2ARB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003527</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002068">
        <property type="protein sequence ID" value="MES1922004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="47"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21340" checksum="02A6A1A2A3214B7B" modified="2025-10-08" version="1" fragment="single">YNQNTRKIAMTSINHKTRFYDLPPVIQTIFNKFDNFVQKQTETRKEIDALLQSSENQKIDYQNLKKRLEKAESRRQKSAALLNVLSNQVTENIKVASNTLTEVNSIDPQIGADNKFDDFFEQKMKFYEEEILKIKKLLSEKEKFGSFPEVLTAKDLARILKMHKESTNALESSVEAMKLKIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD0</accession>
    <name>A0ABV2ARD0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003739</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002432">
        <property type="protein sequence ID" value="MES1922230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="88"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="167"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="25034" checksum="842B7E0B24A6AC1F" modified="2025-10-08" version="1">MKESSPDDEVRSRVRHYISSIKNCPEVIGEFKDIKDEILQYYTKLSSELKTVENELKGSDEKEIEGAVSYKDESVAPFVAGLIATSPIWIPLLTAAVVLGLVSLPFIGPVIAFLGRDARKKRIIDEEYAKCKPTFCTLVCDALNREHGDVLHKLIKTLTHNIFDKRIGFLKETIKDLSDNREQIIEQQECLGRLTEKLEHVERMLEKIIQDSYAFMNNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH4</accession>
    <name>A0ABV2ARH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tripartite motif-containing protein 45</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">TRIM45_2</name>
        <name evidence="1" type="ORF">MHBO_003597</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002190">
        <property type="protein sequence ID" value="MES1922079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd19757">
        <property type="entry name" value="Bbox1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.830.40">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19050" checksum="A3569C6B7E6AD193" modified="2025-10-08" version="1">MEDDYICSTNLCALCNDVGESVNASLVCKEEHIYLCDPCGRRHKIQRATKSHKVITIEEDRAKEVLCELCLGENERVPAYGYCETCEDPEYMCRSCSKRHTASKIFKSHSINTDLETRPNDSQSSAQVSIIFNNSSMDSNSMYSNEMKYRNHLDAPKLIYIRIKQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH5</accession>
    <name>A0ABV2ARH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003772</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002487">
        <property type="protein sequence ID" value="MES1922264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="254"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="281"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="281"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="320" mass="37967" checksum="8D3E141BCA1B4805" modified="2025-10-08" version="1" fragment="single">MVQTFGQNWKFHTEEEFVKSEDDIKVHPLQKRILKRESHLHSKNLNPDITGKFRNPHNAQGNASIICIPVFKLDKNDVKKAREQIDSDRSEEGHGFLFQIHLNYPSFDELTKNLKEPYKFRNDFLHWQFVQKKETFLAQLPVDFDLITFNLLMVDKEERVLPDIHVSLNMNDSNCEITDDNKHLIIDAMHTLLWKEMLANFTTYILCNRQFETSKFRNITYYLTTIWIGYDLNCTRDPSKGGKPIYLKKDDFPLVAPFISFFLSLQFVWIFVILEIGKRESDHQDVQKEEETNESSRERENEDMKGVELSFNYKEGDRPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ0</accession>
    <name>A0ABV2ARJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003789</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002509">
        <property type="protein sequence ID" value="MES1922279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="367" mass="41770" checksum="04A1CA0CE63514AA" modified="2025-10-08" version="1">MVPEQLLVVPNLLESCVVHLQEHPRYLRSVLRRHLVHPREDHVSPVRLVRRRPLHLLLRRPRNRPHHRLLPPSHRHLRHPRASPPRRPSSVHVALRQLLRVDQRRRRLVHPRAELRRRLHELAVALRLHLQLLLAHVLALPEGHEEHLPDPHLPVQRLDPARRVLLRRVQHEAEALRDAAFVHPHLRGDDLPVLGELLAEEIVIDALGEVLDVDVAPGGVRVHLLAPLQVLLVQLVAAHRLAQRFCDVELLGIFFVELFDDALGDERVLEVHEAEAGGDGVVHGEVDAGHLAVFLEEGEEGGFVGEEARVEVFDVDVCELGLAGVAGAARFEGADFDDPRGDFHVVHFFYRLSIIGFVRKKFDKNNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP2</accession>
    <name>A0ABV2ARP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003853</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002622">
        <property type="protein sequence ID" value="MES1922345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15253" checksum="C42268574C9C0860" modified="2025-10-08" version="1">MTKEESSQTKRRLSILKKSNNGKQEKRRRVSFGTSNQLITYSNNDKKINETSSLSFKREYVPLNDELTEKENFENENFEQSVSTSISKETEIDDKSLKSTPTSFLNRFFANYEDNISEDDNSTLEITGTSKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU0</accession>
    <name>A0ABV2ARU0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">mitogen-activated protein kinase kinase</fullName>
            <ecNumber evidence="6">2.7.12.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_003892</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.12.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.12.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10596"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:20101"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:61978"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.12.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.12.2" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010002703">
        <property type="protein sequence ID" value="MES1922384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48013:SF9">
        <property type="entry name" value="DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48013">
        <property type="entry name" value="DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="1"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00038035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00038999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00049014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00049299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00051693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1922384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="26391" checksum="A60F319C2C57EDFB" modified="2025-10-08" version="1">MHHVFVLDKFILIAMERCELDLYYLKMNFDLTEEVIEVIIGVISLALNYLHYKLEVVHYDLKIENVLLTKNGIIKICDFGMSRRPGINDENITTSFFSKPPELTYYNTAIDYSFDSWGLGMIIFFICCDFTPEYKIDYNNFIEIPSSCFIQLFRNNTKYPNLTCDIEYLLGRLLITEKRLESEDSTDLLGVYVIQKCVQKIGAYENKNLTIEERFSKKMYLLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX7</accession>
    <name>A0ABV2ARX7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">General transcription factor TFIIB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">GTF2B</name>
        <name evidence="7" type="ORF">MHBO_003936</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002770">
        <property type="protein sequence ID" value="MES1922425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618:SF13">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIB-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="Zn_Ribbon_TF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57783">
        <property type="entry name" value="Zinc beta-ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51134">
        <property type="entry name" value="ZF_TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIB-type" evidence="6">
        <location>
            <begin position="9"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00031706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="27602" checksum="0E039140B542A1B3" modified="2025-10-08" version="1">MPKFSKYVEPIQPTCPECVQSVVVKDTREGQNVCTSCGLVLGHRIISDDTEWRTFSESNDKGVDMNRVGGPSHPLLEEEEVGSTQIGKGANNNHILTRNQIRASSGKSQQLFNHYKTIDEINYKLKLSGSVKVITQSIFKQLFDLGEVKGRNKDNLIVACSYIACKLDGVPRTIKELCANSGMRRRDVGRSYLNIQRLQQNGKIKIRRSKGDSLAEKNSHRFVVFSHFSQFFKIFFQINISPNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA8</accession>
    <name>A0ABV2ASA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004064</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003071">
        <property type="protein sequence ID" value="MES1922549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="26869" checksum="9E0AC17490918679" modified="2025-10-08" version="1">MTEEEAREKALNDFIEATETAQQSSYVENLSAIQRERGAMRMFTSYMSSPIMYQQKLMSASRNIANGRGSAYDVKRFLMFAITQPLMYQLAQTGFSVFGDDDEDRLLKTLGKGALLGTLQGLPIASKGLEYIYTSVVDKENWNPYTKRFEPIPNLRIIPEPLMLAGKASNEFAKNGLSTKFYDHMFTLATTATASFGIPLRNLKKITYDNFMRATGNLEVEDWREILGYTKTQLGLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ7</accession>
    <name>A0ABV2ASQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004219</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003454">
        <property type="protein sequence ID" value="MES1922695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="28655" checksum="C0D6B2E7D3E4CBB2" modified="2025-10-08" version="1">MLCKSDDHRFICKNNTSNNPLNCCPFITISFISGMTIIDSFSFTKNKLKSAIFAKLSKSEQTPKTLKKLFLNPSFLLVFIIKRIVDSEKTTEIELMLSSRTFSERGAQMRSREDKTPAQMTMQIAICAKNLSTEWARRRRNMEEREREFVTAKTMLIEMAPRLKANSMALRMQKHQDSRRKNEMNANKCRRRRVSVLEQVPPRRMIQNIKETVKNIVRKTKKSGWAIFSDLVNFIFERIRKTKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ9</accession>
    <name>A0ABV2ASQ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">V-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004236</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003493">
        <property type="protein sequence ID" value="MES1922711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042855">
        <property type="entry name" value="V_SNARE_CC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00957">
        <property type="entry name" value="Synaptobrevin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50892">
        <property type="entry name" value="V_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="96"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="V-SNARE coiled-coil homology" evidence="4">
        <location>
            <begin position="31"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14421" checksum="42F37D1F6BF9FC41" modified="2025-10-08" version="1">MGRNRNKKRGNKKDKQEKSVSSKSSKKKNSAEMKVLDKIDEVKSTMTENIEAQLGNAEALIDIEAKSNEIKDHAQDFEKKSSDVKSRMRWLLIMKWTILIAIISAVIFFFKQKIIILIIVSLVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV5</accession>
    <name>A0ABV2ASV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3-demethylubiquinone-9 3-methyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003508">
        <property type="protein sequence ID" value="MES1922722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="117" mass="13879" checksum="DF79E27226C4A37D" modified="2025-10-08" version="1">MICALELIEHIPNVFEFLKCCHFLLKTNGILVISTINKTIKSYLLTIFLAEHLFKIIPKNTHRFDWYQKPENVTFLQEKIGFRDFTKAGMIYSPFEDRFYLSRNDSSVNYIMSSIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX6</accession>
    <name>A0ABV2ASX6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Exportin-1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">XPO1</name>
        <name evidence="7" type="ORF">MHBO_004304</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the exportin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003690">
        <property type="protein sequence ID" value="MES1922780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014877">
        <property type="entry name" value="XPO1_C_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08767">
        <property type="entry name" value="CRM1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01102">
        <property type="entry name" value="CRM1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Exportin-1 C-terminal" evidence="6">
        <location>
            <begin position="23"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24578" checksum="B7C44AC6A4D09530" modified="2025-10-08" version="1" fragment="single">QISKVLRINIKVAKGLGSFFELQLSVINIDMLDLYKFLTDHISNFAKENGEMIFQDGKTRIIMTIRSEILTLFRIHIGNIKENNKNIITEKFIPALYEPLLDQFMNIHPLVRDHHVVSLFEVLIEKTGTEAKSLLPQIFSTLIKNTAEMVETRKSEFSEHGVKLYRLLKAIFVHCFPVILSLNESDFMYLYTRVINGVDHRSGEISRLGLEIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT14</accession>
    <name>A0ABV2AT14_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YchF C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004337</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003800">
        <property type="protein sequence ID" value="MES1922813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013029">
        <property type="entry name" value="YchF_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23305">
        <property type="entry name" value="OBG GTPASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23305:SF11">
        <property type="entry name" value="OBG-LIKE ATPASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06071">
        <property type="entry name" value="YchF-GTPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="TGS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YchF C-terminal" evidence="1">
        <location>
            <begin position="36"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10577" checksum="3634B3890F7ED06D" modified="2025-10-08" version="1" fragment="single">LNDLGEQKAKDYINKLNVPNSRINKIIRSGYTALSLCHFFTCGEKEVKCWTVRKNTNAKKAAAVIHSDFEKYFICAMIMSFENYKKYGSEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT61</accession>
    <name>A0ABV2AT61_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Stress-induced-phosphoprotein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">STIP1</name>
        <name evidence="5" type="ORF">MHBO_004081</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003110">
        <property type="protein sequence ID" value="MES1922567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22904:SF523">
        <property type="entry name" value="STRESS-INDUCED-PHOSPHOPROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22904">
        <property type="entry name" value="TPR REPEAT CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="27"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="160"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="235"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="160"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="250"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="35125" checksum="8D5F268506DC4278" modified="2025-10-08" version="1">MAYLKNNNIEAAQSDANKIIFLEPNSYKGYHLKGVTLQSQEKFEDAIECYKKAIELGSTDDGLKIRLEDCIKATNKLSQYKDDKLPVYEKIQLYMRSQVANDTEGKSSDFDTEAVTSTTMLINEDNFDSNNQKIDGIDEAASTFRILESLIDKENDKKEIDEKEVEEKEIDKKEIEEKEIDKKEIEEKDGDLKEEQNGEKIEKEINIGEKHRQTIEKMDEDEKVDIKRFKLAEKYESSYYSEEEDDYKSEDDQYKEEKDMSKEEDDKNKEEDKNKEEDKNKEEEIDPFKIFEGLKEPQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD9</accession>
    <name>A0ABV2ATD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004276</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003598">
        <property type="protein sequence ID" value="MES1922754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="8090" checksum="057EAED2C74E771B" modified="2025-10-08" version="1">MPGIINRTNLHKIHLDLGDWYYQTMMIQSANRFHQPSLLPILYLVVYHNHKIVWMTYLVLVSVMRHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI4</accession>
    <name>A0ABV2ATI4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PPM-type phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004324</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003753">
        <property type="protein sequence ID" value="MES1922799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832:SF790">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C 22-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="163"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="164"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="23593" checksum="EEEC01BF3AD51D65" modified="2025-10-08" version="1" fragment="single">LELAYARTEAEFVRGAAMAGDRSGCTALSLILDSKQRRITVANLGDCRALISRNGQAKEITRDHIPTDSAEADRICSEGGTIIADRVAGKLSVSRTIGDLDKKGQKIKGLSASPELFEIELGDDLDFVLIGCDGLFEQNTSEKLARFVRCLIRVRRCPQKVVEIEGDGQPDDDSDSADGEGRGDGGEQVYAGIVVWRAEESEEGAEIFKGVADCQVDVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS1</accession>
    <name>A0ABV2ATS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004577</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004448">
        <property type="protein sequence ID" value="MES1923042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006849">
        <property type="entry name" value="Elp1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12747">
        <property type="entry name" value="ELONGATOR COMPLEX PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12747:SF0">
        <property type="entry name" value="ELONGATOR COMPLEX PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="25939" checksum="8416474632358E5F" modified="2025-10-08" version="1" fragment="single">ERKILLLRQTSKNNTLKITEEIANWTNLKKSPLESILKATISSLTRKDKEKYSVPIIIALEKLKLNSFKFIQNLPEETASENIKYLLSLKDEKDVFEAALSTYDTVLTLQVLSHCKFYDMEEIFPFLKRIDSKSETEKKFETNMYLGRYNKALFYLSRCDRFSDCLSLIQRYQLYEAAFKIWSVSGMDKKKNPDEKANEDEWFQIAKLYAQYLEDKDPFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU18</accession>
    <name>A0ABV2AU18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004691</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004887">
        <property type="protein sequence ID" value="MES1923146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="12357" checksum="5B04EC78846BBD86" modified="2025-10-08" version="1">MTTKNKNLLKKAIFLLSKKDFEKMSNIIEPEEIEEIETTFKNLSYILTEVKFEPKRPRFEFCDKYNSAICSSQMIWKKLLKNEDKTVIGKMIIFKYKTRNNCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU89</accession>
    <name>A0ABV2AU89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004473</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004099">
        <property type="protein sequence ID" value="MES1922942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="181"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="73"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="96"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="181"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="27379" checksum="E4AD16E4E75DE603" modified="2025-10-08" version="1" fragment="single">KALCDDKGRKYIKDENYKFGTKYKKTKQIKGENKDIEEFANSDANSDDSDDIDFLVTGSPDEDFNPVIYEEQVTQRNRQGSDGQISEEEGSSFSEDTNKSDIDFVIQDEKQSESDEEKFKRRIRHKTRQTNEISFDYSDESESSEEENFEEKIDIRPRRTKSGREVKPPKRELYYEEIAKRMKMDDKIGDKNDDQIENEKVKEEKNDDLNGKNENEYRDVSSEEYVHKGNGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU94</accession>
    <name>A0ABV2AU94_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005211">
        <property type="protein sequence ID" value="MES1923233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="7538" checksum="5415D0E0199B9FC6" modified="2025-10-08" version="1">MECVGGGKCLKEETIQTQNLERNECLTLNPMLKTLNNGGSGDGGYCMGFIHPFNLTIHCSLIYISKEGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE9</accession>
    <name>A0ABV2AUE9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004849</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005496">
        <property type="protein sequence ID" value="MES1923298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="7413" checksum="33CE04063C44CE20" modified="2025-10-08" version="1" fragment="single">EPSGTDIQHQRWLFRFDCGAIVWRESAAHCERNNRSNLRFCRYSGRRVGDDICGQKISREKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF2</accession>
    <name>A0ABV2AUF2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DEAD-box helicase OB fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004851</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005512">
        <property type="protein sequence ID" value="MES1923300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011709">
        <property type="entry name" value="DEAD-box_helicase_OB_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07717">
        <property type="entry name" value="OB_NTP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box helicase OB fold" evidence="2">
        <location>
            <begin position="3"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19011" checksum="6B4AF688414A403C" modified="2025-10-08" version="1">MPCMLHPSSALYGLGYTPEYVVYHELVFTSREYMRIVTAVNPHWLAELGPMFFSLRERNAASKANRESIVFTKTAVLGGENDTAPLKSVTVSVEKKEDVTVKRFTKSMVDKKNFGNSKKESSETEMEKNKKGKLAKTDKNGKRANWKGIGKVEDGIRIGKTKRKRKFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG4</accession>
    <name>A0ABV2AUG4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004841</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005472">
        <property type="protein sequence ID" value="MES1923292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.800.10">
        <property type="entry name" value="Glutamyl-tRNA Synthetase, Domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050132">
        <property type="entry name" value="Gln/Glu-tRNA_Ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000924">
        <property type="entry name" value="Glu/Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097:SF5">
        <property type="entry name" value="GLUTAMATE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097">
        <property type="entry name" value="GLUTAMINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00987">
        <property type="entry name" value="TRNASYNTHGLU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic" evidence="7">
        <location>
            <begin position="3"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20504" checksum="6F6AF55FD1B5717D" modified="2025-10-08" version="1" fragment="single">NSIIAKIWDGKMIVRFDDTNPTKEKTEYVDSILSDLKTMKIDYWKITFTSDYFLLLIKLCENLIRSESAYVEDTPREQMKKERLERTESKNRNNSVDKNLSMWSKMINAEEPFIVRIKLDMKSTNGCLRDPVIYRVGNGEPHLRTENQFKIYPTYDFAIPIVDTVEGVTNSFRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS3</accession>
    <name>A0ABV2AUS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006104">
        <property type="protein sequence ID" value="MES1923418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7235" checksum="E9E26BD9A87BEDD1" modified="2025-10-08" version="1">MCTGRTRRLRALMQFPRDSNERLMFAPSRKRNPLFFVLLARSEPAKSIRDSFAVLQSEALCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ1</accession>
    <name>A0ABV2AUZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005027</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006269">
        <property type="protein sequence ID" value="MES1923454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9404" checksum="0182F0E0C256F921" modified="2025-10-08" version="1">MRKAFFVQPLNKKRAMLRGKCVYFNAKEKEAAVRREHSSWPPIGFIVPDVLLDLIDRGKTLLFNVDFTANLKPFVVNLRVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV87</accession>
    <name>A0ABV2AV87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphoglycerate mutase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005176</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006987">
        <property type="protein sequence ID" value="MES1923580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="140" mass="16297" checksum="9A4D797556B50EF1" modified="2025-10-08" version="1">MQKLYSNKVIATENARERHGVHLCDKRKKWSEIKSSHFDLINEFDFESDKDVYFSSEKREDISSLIDRISALMKLIMRSESDSIAVVTHSNLLYNLLNICLVEVCAQKPLMGTGTDSRSFNGWFEPCDEKQIYVHFDKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV99</accession>
    <name>A0ABV2AV99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005191</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007047">
        <property type="protein sequence ID" value="MES1923592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="132" mass="15076" checksum="C19EFF66FE1C0942" modified="2025-10-08" version="1">MSERDIWISFQAGNPKVKVLDGRLKISSKTAINKIAISGISGLDDLNKICQNLSRNIKSLHNVQVLTEKHKKDSILLLLFIPTEDTSSVVKMLCSFKESDWKETNIVFNKVEVIECLRSSVFIFRLYFVKQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWQ3</accession>
    <name>A0ABV2AWQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007418">
        <property type="protein sequence ID" value="MES1923647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="8894" checksum="1D4A4DA536374510" modified="2025-10-08" version="1">MQMTCCRGISSPEEKFHSSISVRYNTHIISNETGRWPIISHQMLEVVPKADNTSDLHLHQLYQRHTTIKFSLSKQGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE20</accession>
    <name>A0ABV2AE20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">60S ribosomal protein L14</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPL14</name>
        <name evidence="5" type="ORF">MHBO_000027</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd23702">
        <property type="entry name" value="eL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.2270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039660">
        <property type="entry name" value="Ribosomal_eL14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002784">
        <property type="entry name" value="Ribosomal_eL14_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11127">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11127:SF2">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN EL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01929">
        <property type="entry name" value="Ribosomal_L14e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein eL14" evidence="4">
        <location>
            <begin position="47"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1917991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15316" checksum="AA3F38162D8BAF50" modified="2025-10-08" version="1">MGRLDYTFKIGRVCFINRETNFGKLVVIVDIVDTTKAVVEGIQNKIKRHSVILKSLEILPLEMDITQTSSSSDIDKISKNDKIVEKFQKSAAFKKIDRMQRREKMNDFDRFKVMIAQKKRSEIIKKHIKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE42</accession>
    <name>A0ABV2AE42_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Tubulin gamma chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000034</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Tubulin is the major constituent of microtubules, protein filaments consisting of alpha- and beta-tubulin heterodimers. Gamma-tubulin is a key component of the gamma-tubulin ring complex (gTuRC) which mediates microtubule nucleation. The gTuRC regulates the minus-end nucleation of alpha-beta tubulin heterodimers that grow into microtubule protafilaments, a critical step in centrosome duplication and spindle formation.</text>
    </comment>
    <comment type="function">
        <text evidence="1">Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome, suggesting that it is involved in the minus-end nucleation of microtubule assembly.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
            <location evidence="2">Cytoskeleton</location>
            <location evidence="2">Microtubule organizing center</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the tubulin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02188">
        <property type="entry name" value="gamma_tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.600">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.20">
        <property type="entry name" value="Tubulin/FtsZ, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1440">
        <property type="entry name" value="Tubulin/FtsZ, GTPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002454">
        <property type="entry name" value="Gamma_tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008280">
        <property type="entry name" value="Tub_FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000217">
        <property type="entry name" value="Tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037103">
        <property type="entry name" value="Tubulin/FtsZ-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018316">
        <property type="entry name" value="Tubulin/FtsZ_2-layer-sand-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036525">
        <property type="entry name" value="Tubulin/FtsZ_GTPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023123">
        <property type="entry name" value="Tubulin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017975">
        <property type="entry name" value="Tubulin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003008">
        <property type="entry name" value="Tubulin_FtsZ_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11588">
        <property type="entry name" value="TUBULIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00091">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03953">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01164">
        <property type="entry name" value="GAMMATUBULIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01161">
        <property type="entry name" value="TUBULIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00864">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00865">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55307">
        <property type="entry name" value="Tubulin C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52490">
        <property type="entry name" value="Tubulin nucleotide-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00227">
        <property type="entry name" value="TUBULIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="7 9" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5 9" id="KW-0493">Microtubule</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tubulin/FtsZ GTPase" evidence="10">
        <location>
            <begin position="47"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="Tubulin/FtsZ 2-layer sandwich" evidence="11">
        <location>
            <begin position="249"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="442" mass="49133" checksum="07B692F67001909D" modified="2025-10-08" version="1">MPRELITLQVGQCGNQIGSEFWKRLCAEHGITKDGSLKDPEVNSGLKDIFFYQADDDQYVPRAILVDLEPRVIDSILSGEQRSLYNLENQFVHRRGSGAGNNWAKGYSCGDEVAEEILEIVDREADNSDSLEGFMLCHSIAGGTGSGLGSFLLEEIADRYPKKLVSTFSVFPNQTKFSDVVVQPYNCVLAMKRLALCADAVVVIDNTALDRIALDRLQMDKPTIGQINSLVSTVMAATTSTLRFPGYSYCDLASLASALVPTPRSNFLITGYTPLSVANCSSTIRKTSVYEIIRRLLQPRNIMASCNTRKGLYVSMLNVMQGDVKPGDVQRSIARLSEKKSINFIEWAPAGVQIALAPKSPFLSSLNDVNGLMLANHTSVKELFSTVLKQFDVFRKRKAFIQQYLDEKCFSGSFDEFDESRNAVENCIEEYANMESKDFLKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE62</accession>
    <name>A0ABV2AE62_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Histone H4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">HHF1</name>
        <name evidence="12" type="ORF">MHBO_000050</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 9">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the histone H4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22912">
        <property type="entry name" value="HFD_H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035425">
        <property type="entry name" value="CENP-T/H4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001951">
        <property type="entry name" value="Histone_H4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019809">
        <property type="entry name" value="Histone_H4_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10484">
        <property type="entry name" value="HISTONE H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15511">
        <property type="entry name" value="CENP-T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00623">
        <property type="entry name" value="HISTONEH4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00417">
        <property type="entry name" value="H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00047">
        <property type="entry name" value="HISTONE_H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 9" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-T/Histone H4 histone fold" evidence="11">
        <location>
            <begin position="44"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="10">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF15511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11353" checksum="F7BB80024BF67F13" modified="2025-10-08" version="1">MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEGVIRDAITYTEHAKRKTVTSNDVVYSLKRQGRTLYGFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEF8</accession>
    <name>A0ABV2AEF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">GNB1</name>
        <name evidence="2" type="ORF">MHBO_000106</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016346">
        <property type="entry name" value="G-protein_beta_1-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19850">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25391">
        <property type="entry name" value="WD40_Gbeta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="38"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="80"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="23455" checksum="D2D239B7FCCDD9B6" modified="2025-10-08" version="1" fragment="single">KDYVNCSAFLSSGKLLTASGDGAAILWDVATGKESAAFIEHESGVICLDASKNSGLFATGGYDTYSKLWDVRQKESICNFSGNNSDVNAVKLFPGDRALAVASDDATCKLFDLRSFRLLNTYEHESVISTLTALLFSKSGHYLFALSEGGQLVTWDLLSGKLLDLQHGEEKLSCMDINCEGDALVVGSWDESLSVWTNDCHHGQRTLIIDPSVKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEG6</accession>
    <name>A0ABV2AEG6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LicD/FKTN/FKRP nucleotidyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000129</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000016">
        <property type="protein sequence ID" value="MES1918111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007074">
        <property type="entry name" value="LicD/FKTN/FKRP_NTP_transf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052942">
        <property type="entry name" value="LPS_cholinephosphotransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43404">
        <property type="entry name" value="LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43404:SF2">
        <property type="entry name" value="LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04991">
        <property type="entry name" value="LicD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LicD/FKTN/FKRP nucleotidyltransferase" evidence="2">
        <location>
            <begin position="46"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="31172" checksum="810E766610306EB8" modified="2025-10-08" version="1">MSNHLSLHKTDSSNQSQFRTFNRKVTPKENALAVELLHVLDKILTKNKIKWCLMYGSLAGQLYFHGLIPWDDDWDIMVFALEKKIVKLLTQFTAENKKFGFAVHSKDFSKLYHVDSTKAGKYHWKWPFVDIFYGALTDNNVEAYNEKICLKTEMFPLKRGFFEGLLLPVPRKPFLVLDKLYKSEFGSKCILGYDHRNEQFSTSEFVECNKLIGKYAWVRNWVRNEGDKEVYVQSLVRNKKEYHRIEIWKDFKGHLVYQFIDFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEM9</accession>
    <name>A0ABV2AEM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000158</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000020">
        <property type="protein sequence ID" value="MES1918148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11498" checksum="CB3D22A6868CB690" modified="2025-10-08" version="1">MEDMRDDIAKRLQIDLECDELKVEKCYKMLRNAKINVLVQISVPSRYKNIEKVFLSQEKMILEKIESIEVDFVKKMNKRTDYLQSTLRGLLNIFRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEW7</accession>
    <name>A0ABV2AEW7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000229</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="345" mass="40492" checksum="2D51C34B6C5AEB33" modified="2025-10-08" version="1">MVSDFYEFDFLDLLDNDLEEYSEDWIETECEIINSLSEHELIWLFSALPLKEMWLFSHLCKKTLKCQSRFLKRVEKVDIAMRGPHVGKMLDLILNGCPNIESLRVYKYFYAEREHFPKISGILANCSNLKSFVGWLTEGVLSRCTKKKLSLRKVFIDMSETGNLKTHLEKFEELEELVLRSRDSRGVSHANMENIGDLFKTAPSLTKLSIRSIYMTDEVKKKLTMNKNLTHFEIIGGGYCDEDVDYLSRRLPYLTHIGLCGNELTKKGVKSIRDNIKRLHSLDIMVASCDSCEETFRFLCEKENFSELRFLYVRKWPVSWTEQFLRSKPLCKVVDFDMWRISFEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB8</accession>
    <name>A0ABV2AFB8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000351</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000051">
        <property type="protein sequence ID" value="MES1918380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11227" checksum="9315F98936B51085" modified="2025-10-08" version="1">MVASNAAIVQTGRYIQQQKKFARIVQKTPSQIKKKAVAVNFVKFLETCPSDKYPIDSGTKCGKCLSTLYRDSFAKRCRKCENNAVPSENQLFCCYFCKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFC5</accession>
    <name>A0ABV2AFC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000344</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000049">
        <property type="protein sequence ID" value="MES1918372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="139"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="153"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="163"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="181"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="25974" checksum="F24D907D05C1BB8A" modified="2025-10-08" version="1">MPKLRFKNGVSIKPEKSAKKGGKMAKELPKKNSPKHKNGDRDKSRTKRKQRSRFRKHRMIPDNYHLNSVITDVMMRNRIKDEEQLDNAKKSLFSLTRNAVESNDVRLLSEFISSNDAEKKYSKMLDQLKEAPPVESDANKPTNKTGSKNRGNLFRENKEQKPKNRNKRKRWNRRQRKIKSSFKERKLEKTEESEKIDLEPVDFSIIEQPLIVPKFLQNEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH0</accession>
    <name>A0ABV2AFH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000408</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000062">
        <property type="protein sequence ID" value="MES1918439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14083" checksum="7608FD3F3D9FA2BD" modified="2025-10-08" version="1">MFIAKKIVRYSHQMVDLNSMELSKIYDCIEFWCDICDLNDENKDTLKKTAKNLNASKNIRISEYLNGGNYGNFNFIDKFKSSKKSLIAEPDLEISKSILSKEEKESVKASRIRTNFKKMLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH6</accession>
    <name>A0ABV2AFH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Proteasome subunit beta type-1</fullName>
            <ecNumber evidence="4">3.4.25.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">PSMB1</name>
        <name evidence="4" type="ORF">MHBO_000208</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF2">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA TYPE-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17386" checksum="0DB1C73F0515EB8E" modified="2025-10-08" version="1">MHSDRTLLLKVLRTQAKQYEFENFKPISGAAVASMLSTELYSRRFFPYYVFSMAATLNEDGNGALYGYDAVGCAEKVEYSTSGSGGIMAHSFLDNQVGFKTHPANKKELTLSESIELVKKTFLALSERDIFTGDKGEICVLTADGLERVEFELRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW0</accession>
    <name>A0ABV2AFW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000309</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000043">
        <property type="protein sequence ID" value="MES1918329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF458">
        <property type="entry name" value="SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="16"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="154"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="194"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="228"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="272"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="317"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="343"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="400"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="9">
        <location>
            <begin position="9"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="427" mass="47207" checksum="B060866EADB48DD4" modified="2025-10-08" version="1">MGFGIKNKKIGIGRSVLNQVNIILGSGLLNMPAAIQEANIYLGLSILFIVCVICDYVSIQIVKMAKKKEVSEYENLAEKVFGKFMYFIIAISCFLNSFGAMVGYVHIVNFSNLTLLSLTIKNPVTLKWASIGTTLGLFLVLVLPFSYFHGLVSIALLSFFSIFAIGVICVILLVTGISIPDPVNNYRRLTGKGFFTAFGTLLFAFVCTDSVFPVYLGLENNTQQRWNIVVHATMGSLGSFYGLFAIFCYLTIPQLNNYVLNSASITNRREILAAKILLSLSLLLTYLALVYVTRTYIFSMFQRFRKPVSELEKKKQYLLRFVAATSTIVVSIFLGLLVDDLLFIVSFTGLLTSTLIGFIVPVLIIFKVNTFTKIWGDFVASFKGEFGVLAGVRNVANFTILILTFLFGISGLTIGVPVTILSYIGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX3</accession>
    <name>A0ABV2AFX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000524</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000086">
        <property type="protein sequence ID" value="MES1918573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="254"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="259"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="303" mass="33601" checksum="5E96FE423A372A98" modified="2025-10-08" version="1">MAELSSKAALLSFFIKPEWAAENCDRGIPRKEDFSGVEAELKNFFGGDDGFIAQTNLFFLEPHSRVDVLLVVGDEDRLRDVEEMARSDEGLFLMDHKTTYSKYDQQVLPRLRKTAQKQLTGLAANGILGLHGAYKGANQMASDWELQQKAEKARKSIYDVFQNVDEKTGISGIARSISESAKSLGEEANRRASKVDSDMGISEKIGSIKGDMSRHVAKLSENESVKSGLNFITGIFSSAKEKIEGFTEETMDIVGSELQETKRPSDKDDGAKVEHLGKDREGSDVAENEISFTAEEMDRKSRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG32</accession>
    <name>A0ABV2AG32_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000546</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000092">
        <property type="protein sequence ID" value="MES1918602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="entry name" value="Decaprenyl diphosphate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="Undecaprenyl diphosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="259" mass="30068" checksum="B860FC59FBE8DD39" modified="2025-10-08" version="1">MIAAAIAAILYQVIAILKIANRFCETITKIWRSIKINYLFPMNEAEFKNKVSAFKKSPTHIAISFQKKEDFVGDFDNLAKSILILQKTGLAHLTLFCNDNSEKINSNEIMKNFGRFLEIFLEDIKEESYENKTFCLKIGKRFLRLNEMEIFLLSKSESDNAVTLAIRNVCSEKEGLNLSDYDSLKHKSYFRKQILKLFPGLKELDILINVNMDRTLSNFPPWLLMNCQMTWATNIKYVDMHFVLEVLQKFSNTKSNFGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG87</accession>
    <name>A0ABV2AG87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000429</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000066">
        <property type="protein sequence ID" value="MES1918464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PROTON/GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865:SF7">
        <property type="entry name" value="PROTON_GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="158"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="204"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="238"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="349"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="382"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="432"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="440"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="452" mass="50431" checksum="ECA96FD863963576" modified="2025-10-08" version="1">MLLEKIQKQFVFPHESLPMFIASILGAGLGFAVRSLIPTEANKIFGIVGEIYFNVLKALMLFYMFTKIVYNTLKISKIKNSFCIIATTILFFFLSSLIFSILGYFTMNFFLKFVPVLSDSEIAQVSAHKEESGDITSSIKQIAFMAIPKNYIQSAKDSNILAITFFSLILGVFLAKNLSKRKIGQNGIDCRKLFKIADATFEKIADFILSFTALGIFSIIFSQIAAIEDLTVFKNLGILAASFSLLCFAACVLIYPMFFCCLVNSNKRSKLIGPYRDLFIKAFSTSAGLTTLTDNTRIAKDIGVPESIAGVLMPIALILQINGSTVYNTMVITFIAHIYKIDFSINNRIALVIISVIISISSPPIPYGTILVLFYVGQIVEVYVPLKIISLLIMVDIYFDRVVTLWNIWPNAITLLFVSTYCKGNANNEDTDLTKISSDNESDSNEEEEYYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP0</accession>
    <name>A0ABV2AGP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000714</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000130">
        <property type="protein sequence ID" value="MES1918812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="28903" checksum="2F4F8B33C7E8CCE8" modified="2025-10-08" version="1">MEISEDVTKIINLENLEKLIKITNLQDFETNLLKPLKVYRIEKARSSLYKKFLKIPDKTVLLGAITANAQLEYVLVLRDDQTSIEIATTNCGISYDTISPSQLVEYCYHKGKWQLSNISLESLGFYRASKFSFWKKLLLEPTCKAQFRRTLRQGMVNRMFDRLVFRMPEEEQKNWQVEDENGKRVYIPRPVEALRIFDAATRRYKDVSPILDDAPSDEEAPKWWTEFLVVLREKHGADFIEEILRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS1</accession>
    <name>A0ABV2AGS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000776</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000147">
        <property type="protein sequence ID" value="MES1918881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="17612" checksum="BAACB676270AD048" modified="2025-10-08" version="1">MDKNNPKFKNFAIESIFKLLLLCKNLQKQNENSINSIRTLNEIEFEANVYLIGNVFANKLLNIIKSSLWISPKMKKTILNKVCSSYRFKAETHPTCDSNRKYLKRYLGIAIDIFEENCNFLDEIWRENFALFKEKEKRLKEFLKFIES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT2</accession>
    <name>A0ABV2AGT2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">SDE2-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000783</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SDE2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000148">
        <property type="protein sequence ID" value="MES1918888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051421">
        <property type="entry name" value="RNA_Proc_DNA_Dmg_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053822">
        <property type="entry name" value="SDE2-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12786">
        <property type="entry name" value="SPLICING FACTOR SF3A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12786:SF1">
        <property type="entry name" value="SPLICING REGULATOR SDE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22782">
        <property type="entry name" value="SDE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SDE2-like" evidence="10">
        <location>
            <begin position="72"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="163"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="209"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="163"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="209"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF22782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="26679" checksum="A3D0DDD80292D98F" modified="2025-10-08" version="1">MLYVQFGKTIFKLNKSDKELSHDIEKSLGIPSEQQMVFYKGKKLPSFITFPDSLLKKLKMPLILNLSCKINGGKGGFGSLLKQQQSNFRTTNFNSMRDLNGRRLRHVRQEQQLTHYVPPTPERRSEIQKDFEQIKQTGRQRQLRNCYFGDSCKYKHKCRYVHPGDDAKSENKADSKTEKELRHNQSMKKASKNLEASMKFALKAIAKRKISDKKSIQKPKSKKLIERQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU8</accession>
    <name>A0ABV2AGU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Ribonuclease</fullName>
            <ecNumber evidence="9">3.1.26.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">RNASEH2A</name>
        <name evidence="12" type="ORF">MHBO_000767</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 9">
            <text>Endonucleolytic cleavage to 5'-phosphomonoester.</text>
            <dbReference type="EC" id="3.1.26.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RNase HII family. Eukaryotic subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.4" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000145">
        <property type="protein sequence ID" value="MES1918872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07181">
        <property type="entry name" value="RNase_HII_eukaryota_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.460">
        <property type="entry name" value="Ribonuclease hii. Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004649">
        <property type="entry name" value="RNase_H2_suA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001352">
        <property type="entry name" value="RNase_HII/HIII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024567">
        <property type="entry name" value="RNase_HII/HIII_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023160">
        <property type="entry name" value="RNase_HII_hlx-loop-hlx_cap_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00729">
        <property type="entry name" value="ribonuclease HII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10954">
        <property type="entry name" value="RIBONUCLEASE H2 SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10954:SF7">
        <property type="entry name" value="RIBONUCLEASE H2 SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01351">
        <property type="entry name" value="RNase_HII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51975">
        <property type="entry name" value="RNASE_H_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 9" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7 8 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8 9" id="KW-0540">Nuclease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase H type-2" evidence="11">
        <location>
            <begin position="10"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="233"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="236"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="10">
        <location>
            <begin position="247"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="30381" checksum="9FE0F5FEF58E260D" modified="2025-10-08" version="1">MESVRSENAEYIAGIDEAGRGPVLGPMVYCICLAKKGDIELVAKEGFNDSKTLSAKSRNSFFKIIKKSDFLHFFVHSASALFISKMMNRRKAKNLNVIARQSTFKCIEKALESGFNVTKIFVDTVGPELKHQKALKTKFPQIDFCVKQKADSIYPIVSAASICAKVSRDESLKRTLKRLKISVDVGSGYTNDPKTRKFLKTAFHPMNGFPKFVRTSWKTAKNVEALHTHPIWSEDEQSKSKDEKKQKTFKQSKYYRKRKIGQIKQIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV2</accession>
    <name>A0ABV2AGV2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pre-mRNA-splicing factor 38</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000798</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for pre-mRNA splicing.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the PRP38 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000152">
        <property type="protein sequence ID" value="MES1918905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045347">
        <property type="entry name" value="HIND"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005037">
        <property type="entry name" value="PRP38"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23142">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR 38A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19252">
        <property type="entry name" value="HIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03371">
        <property type="entry name" value="PRP38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5 7" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0747">Spliceosome</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="152"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="178"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU367025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="27509" checksum="7821F0F1FEF773A9" modified="2025-10-08" version="1">MHCFALNAESLIDKAVDLIAVGGTFGGNRKPTKFLCLTLKLLQLQPEKEIIVEYITNEQYKYLRVLGVFYMRLTGKAVDVYQYLEPLLQDYRKIRIRDAMGKYSITHIDEIVHGLLTESHYFNISLPSLPSRWSLEKAGVLKPRESLLADLDDLDKEEQISPSPERADSSKHKKTSKSKTEEISNSKEMEKGQEKEKSRRYKSIFTKNPMAANEDGGRQEVLSIDETNKLREKLGLKKLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGZ4</accession>
    <name>A0ABV2AGZ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000115">
        <property type="protein sequence ID" value="MES1918734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="32"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="409" mass="47890" checksum="D8BA180ADAA5FEC9" modified="2025-10-08" version="1">MVRDRYERLKNDKGENLKFSNENKNDNLNQIKNAHKKQIFFKQEEIEKLQNDKNKLIKSLNKSQNDIKFNNTNFENFDDEHKIEQEISIKVIKKLQQLKECQKCKIKDYFEQKNIFGRIMICDDAINETMQFICDYIVGHICYWLYFFVTKSNIVAVASELCGLAKYSYGTQILSFYENKQSNKLIGTILSILMDFSVRKEKDIIEKKFLNFLETVLQNELTAKNIDRILKQLSPFVIDGHFNRIVNNSNDQKIKSLAMQIGSHLMKDEGDSPLISLLSDYALENKNLVYKTQIINFLLKICTNQEKEGPAILINLFSFIKQEGMAHYLIKSIIEEIDFLSIRNKKELKEEECALENLVLKEIHLLTLVSTEKSSLVGKKHFVKYIANFVNEWTDNKSFLAPDLQNFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH97</accession>
    <name>A0ABV2AH97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000169">
        <property type="protein sequence ID" value="MES1918972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045335286" evidence="1">
        <location>
            <begin position="20"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="23664" checksum="015E0F098599BF0D" modified="2025-10-08" version="1">MSAANLVFVLFANTVLSYAIKNCVLGKKNGHFSARNIVVQQDKFVTTKCFYSNKNITLYCNPSSRPYFSSNETCPVKKCSNDLNYTCAYGACFARQTTNVLVNGKIVSTFEEEFYCHRLRYLLRFRRQNITNRNNKSINIQFKYDQKRPLKNLIQTPFCKHTINSGCEIKAREGMSLFVEPHVLSPLSTVNVEDDKVIEVKQKGLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY0</accession>
    <name>A0ABV2AHY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001143</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000247">
        <property type="protein sequence ID" value="MES1919286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="468"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="487"/>
            <end position="496"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="620" mass="71063" checksum="3811DE1B0FA0080F" modified="2025-10-08" version="1">MTKFMLKIASDLNMKLPDGNTFLNKTISLFENISILEAILDHPRILMNLPNSLGHTPINTAVIKMSCPIVELLIRKGAICDPFVNLSIDPLINLFSAPILSLKIMELLLKNNASICSLHENKTIFAIALEIQSLEVIEMLQKFNPPSKQIEFQRNFEALKQISKAKLEIANGNGRKNSEEKSEKLKKTTQKIELMKIFNPNVEKSGIFNDTDHNFVSIQFKKLSDYVLTNTRPLSVEEIFLSIKTFNKSAFQYLIKCKTDLMETFFNKNEKTVLLNETVKLAKNVDKQFQKDFCVFAITEMIENGANPNFKFEDKKSAIELAKEENLETILKILSNYLHDVKKDNGVESKVNDFDSNKMDQNCEIKLVIDENIKTDELEPLKIVNFEKTNYFLKEYSEKTKYYLKYSDNGESKKSVSKNFAKKDRKMSGKCSKKNGKLLFSKNESINYVHDYENSNKIVKNDRKPITNFAKKQSIRSQNEDGDKTAKNNQTQLKTTKNGDKTAKNNQIQLKTTESDQKLSKSMTDGIRLNQLEKSYASVLTKKKNFENLSKKFDSHNSGSTAPVTRSPTKNKFRVLKIPNTGFYELDIPSYYLTGDITEKDSFGLQRIVYPNTSFLFIEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI07</accession>
    <name>A0ABV2AI07_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">H/ACA ribonucleoprotein complex subunit 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Nucleolar protein family A member 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">NHP2L1</name>
        <name evidence="8" type="ORF">MHBO_001101</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Common component of the spliceosome and rRNA processing machinery.</text>
    </comment>
    <comment type="function">
        <text evidence="6">Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
            <location evidence="1 6">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the eukaryotic ribosomal protein eL8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000237">
        <property type="protein sequence ID" value="MES1919242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050257">
        <property type="entry name" value="eL8/uL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002415">
        <property type="entry name" value="H/ACA_rnp_Nhp2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="Ribosomal_eL30-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004037">
        <property type="entry name" value="Ribosomal_eL8-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004038">
        <property type="entry name" value="Ribosomal_eL8/eL30/eS12/Gad45"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018492">
        <property type="entry name" value="Ribosomal_eL8/Nhp2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23105">
        <property type="entry name" value="RIBOSOMAL PROTEIN L7AE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01248">
        <property type="entry name" value="Ribosomal_L7Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00881">
        <property type="entry name" value="L7ARS6FAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00883">
        <property type="entry name" value="NUCLEARHMG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="L30e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01082">
        <property type="entry name" value="RIBOSOMAL_L7AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Ribosomal protein eL8/eL30/eS12/Gadd45" evidence="7">
        <location>
            <begin position="19"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU366039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14041" checksum="4DEEF28D12248E30" modified="2025-10-08" version="1">MSEVNSRAFPLADEELKKKLLELVQSSHQYKQVKRGANESTKALNRGQAEIIVMAADTDPIEIVMHLPLLCEDKNVPYVFVSSKMALGRACGLSRSLIACAILKDEDGNLQNQLNSTKRKIEQLMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI62</accession>
    <name>A0ABV2AI62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001214</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000269">
        <property type="protein sequence ID" value="MES1919369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="12092" checksum="B9A712233F01103C" modified="2025-10-08" version="1">MVHILFENKEHLISRRNCKIYNFINEITCLRNANFGEIDDFIKSYVDSRRFEIDDLNNLEHRENEVDGDNTIDDIEIVDEKGHYSFDINIIIKIFNIDLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIL5</accession>
    <name>A0ABV2AIL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005292</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000309">
        <property type="protein sequence ID" value="MES1919498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15538" checksum="60BD0E6E74B03C16" modified="2025-10-08" version="1">MESGQHLIAKMAKSLKTTDEKMRKCVLEKNFEKYSNKEIISIIKIIESDSKTNEKTTRDNILKLLDKEIDSNFPDLFEKTVTKIKNLDIKDGEKENNEDFYLRKESLLYRKMVSSLQNDFYSPIKIVDAVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIS2</accession>
    <name>A0ABV2AIS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001387</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATG22 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000331">
        <property type="protein sequence ID" value="MES1919580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024671">
        <property type="entry name" value="Atg22-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050495">
        <property type="entry name" value="ATG22/LtaA_families"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23519">
        <property type="entry name" value="AUTOPHAGY-RELATED PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23519:SF1">
        <property type="entry name" value="AUTOPHAGY-RELATED PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11700">
        <property type="entry name" value="ATG22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="91"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="115"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="360"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="429" mass="49466" checksum="F3671D59AAD2B69D" modified="2025-10-08" version="1">MSSEKIKNFSYILFFFGRGPFLSAYLIVFLPLVLDLMKYNSNINGNVHFLFFPMAPASALVITNGLTCLSVILLSPAIGGISDYGDYRRKFIFYFLGIFVSFMSLPFFLVTYQSWLLAAFILVVAFTAFECCYALITSYLSEISNNKEERSFLSSFSVISENLSIICILIAMPIFLIGEKPRNLITNGNFEVPDSFQSWQIESGGSIQKCERRYDFLDVLKFSSAKCWRGENNVKQAKADLEIFVPKNKEITLFQQKKIYYPFNGDFRLTLKSSTKKLRQFVKTTLSILQKDKNNKNLLEKTSLVFQVTSKDQFISTKFDVLEATRLLEFRITMKSVDDVSSIMKVSNIETILSINKVHIWILFLCAVWFTVITFVCVLLLGKFFKKIKEKKKKFLTLRLEIKEFLCLDSLCYEKLFSILLKIKIFSTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT3</accession>
    <name>A0ABV2AIT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nitrogen permease regulator-like 2, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">NPRL2</name>
        <name evidence="6" type="ORF">MHBO_001141</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase C13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000245">
        <property type="protein sequence ID" value="MES1919283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028361">
        <property type="entry name" value="GPI_transamidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001096">
        <property type="entry name" value="Peptidase_C13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48067">
        <property type="entry name" value="GPI-ANCHOR TRANSAMIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48067:SF1">
        <property type="entry name" value="GPI-ANCHOR TRANSAMIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01650">
        <property type="entry name" value="Peptidase_C13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00776">
        <property type="entry name" value="HEMOGLOBNASE"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0337">GPI-anchor biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047104350" evidence="5">
        <location>
            <begin position="17"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="30927" checksum="9D289304829135B2" modified="2025-10-08" version="1">MLIAVMAFSTLVLSRASHSNNWAVILSTSKYWFNYRHSANALSIYHILKENGIPDSQIILMLPEDTACDRRNVFPASIFNENGGANLVSDQIEVDYRGDEVTVENFIRVLTGRHHRHTPMSKRLNTDGSSNILVYMTGHGGENFLKFRDKEEIQSQDLADAIKQMEIQGRFNEILLVTDTCEAFSLYKSLYSANVIAVASSDVGESSYSYGYDTNIGNTLIDRFTHFTLKFFQRRGSIKQKIARYVGSLTLSLSSCAIRICAPRPKSPCTLWTGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ16</accession>
    <name>A0ABV2AJ16_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PUM-HD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001284</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000293">
        <property type="protein sequence ID" value="MES1919454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033133">
        <property type="entry name" value="PUM-HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001313">
        <property type="entry name" value="Pumilio_RNA-bd_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537:SF13">
        <property type="entry name" value="PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537">
        <property type="entry name" value="RNA BINDING PROTEIN PUMILIO-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00806">
        <property type="entry name" value="PUF"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00025">
        <property type="entry name" value="Pumilio"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50302">
        <property type="entry name" value="PUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50303">
        <property type="entry name" value="PUM_HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="PUM-HD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="6"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="42"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16600" checksum="93E269980CEDD844" modified="2025-10-08" version="1">MGLYLAIAKHTEKLVQDQFGNYIVQHALETSPNKVKEMVKLNMLGKFVAYSKQKFSSNVVEKCLKVSDAKWQRNIVRELIFFPWELINDKYGNYCLQTALSVCDKDLCEEFAKAVYPSLSRLRENVKVKWVNLLEAAKLKHQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF6</accession>
    <name>A0ABV2AJF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001217</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000270">
        <property type="protein sequence ID" value="MES1919372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="21"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21104" checksum="41BB14F44EC8F589" modified="2025-10-08" version="1">MFEAKKEHLQKLNSLFAEAKTKRKQNKAPRKTYSDTKAFPKKTPKMGFKFGEKHLEKNPDLLYSATSTCFSFDSAELASLDSDGETEDEKIAPLSFSVTVNDEHIYIPQKQNYAAFDISNDGFAIVPEFQEVLPKEDAQSVVLSKKSFQHRDNRFRNLKKRKAVSLVVDTLFHKWDSNYVSDNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK5</accession>
    <name>A0ABV2AJK5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GPI ethanolamine phosphate transferase 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001606</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000420">
        <property type="protein sequence ID" value="MES1919850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="entry name" value="Alkaline Phosphatase, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002591">
        <property type="entry name" value="Phosphodiest/P_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039524">
        <property type="entry name" value="PIGO/GPI13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23071:SF1">
        <property type="entry name" value="GPI ETHANOLAMINE PHOSPHATE TRANSFERASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23071">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL GLYCAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01663">
        <property type="entry name" value="Phosphodiest"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="Alkaline phosphatase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="352"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="377"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="441"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="468"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="491"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="546"/>
            <end position="566"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="572"/>
            <end position="590"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="602"/>
            <end position="632"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="652"/>
            <end position="671"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="706"/>
            <end position="725"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="746"/>
            <end position="766"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="781"/>
            <end position="802"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="312"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="804" mass="94087" checksum="8E9539D7A1DEFE26" modified="2025-10-08" version="1" fragment="single">ILTVFDNLSKNTKRSKLFRFVSDIPTVTNQRIKALMTGSIPGYIEFRENFGGTEINEDNLLKQFAQSNKKSIFLGDFIWEGMFPNAFVRSYFYPSLNPIDIYSNDEGIDSHIDEEWAKEDWDVLFAHYLGADHVGHSLKANHPKMEEILKKFNATCAKMAEKVDKMNKTIMVVFSDHGMLESGNHGGDSDKEKDAFLFAHVSKDLCFEEENQKSKTYNQTSLAPTMAILVNVPIPFENVGNIIRELVPIKSEKTSSQDFREKEMAKYLLKNNLQIFRNLQINVKNIKIRNLLKIELENFYLLQKKHLFLLKNDQNKTKFKQLNEEYDLLLRKLRDISLKNWIDFDYLKICKGLFVISMTTFLSLLLLLDLYCTNKNINFQCSTIMAIISFVLLLPTQCTKIVFTLLTSYFADNIQKLIFLLRKNLIFNESLIKPKKNFCSVRKIAVLLTFIFFNWTPIAYYQILYEKYWIFAILIIVSFFIFVLNSNNKANFIIILCALLSAHFFQFSKETEIYNPIKSSFLLTTITLSILHSFTKLQKNSFCDHSIILAQICEVSLFWILNVSNFETLPKTFLYCFNSVVIFSVFVSVLRSVMKGALKQFFIGILTFSLILYSSFILPFLFILLVNIAILAFEFKNFGIRNFDRSPIKTKFCLELIIWYFYLLGNLFYVLSGNDYLISSIDFRFAFYLFGFNFTSKLFVFLRTYFVFALCLTSIFVLIKITALFGLTVSKKRRKKWTKMAFEKAFLLLIFFNQSKILFSAVNLFFKRKHIVVKEVFQPKYLFDHFMCLFINGFLLFLTFLVRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU4</accession>
    <name>A0ABV2AJU4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rab-GAP TBC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001682</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000449">
        <property type="protein sequence ID" value="MES1919939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.270">
        <property type="entry name" value="putative rabgap domain of human tbc1 domain family member 14 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.750">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000195">
        <property type="entry name" value="Rab-GAP-TBC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035969">
        <property type="entry name" value="Rab-GAP_TBC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050302">
        <property type="entry name" value="Rab_GAP_TBC_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47219:SF9">
        <property type="entry name" value="GTPASE ACTIVATING PROTEIN AND CENTROSOME-ASSOCIATED, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47219">
        <property type="entry name" value="RAB GTPASE-ACTIVATING PROTEIN 1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00566">
        <property type="entry name" value="RabGAP-TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00164">
        <property type="entry name" value="TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47923">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50086">
        <property type="entry name" value="TBC_RABGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rab-GAP TBC" evidence="2">
        <location>
            <begin position="119"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="35"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="33363" checksum="90ADE63154878F10" modified="2025-10-08" version="1">MDKSKNFFYRKATTAQTTNNEDQMNKIDSEDKNVQNLSNKSKFSKSSQNSSIQSLQQVENPVIPKINLYGFETKGIVGAKSQDYEKKQQKHLNKWIEITKNWCKHCKAKNKLKRHIRKGIPDSFRGAVWYSLAKAKSYREKSTTKFKDYVKSDELDPKIDSQIKKDLNRTFPYNVYLKEGRGQESLYNVLKATALHVKEVGYCQGMGFVVATLLMYMGEEDSFWVLISMLKGKLNMGEMFKENFPLTRKRFFVFEKLIKRHYPKLHEHFVFNMILKNCKKVFIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE2</accession>
    <name>A0ABV2AKE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001686</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000452">
        <property type="protein sequence ID" value="MES1919944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6858" checksum="F3266B0AF956A502" modified="2025-10-08" version="1">MFVPNLLRITAMSVSTSTMAQNVKPIYFVGNEALELSVPKSIQFNCEHSNKRIQQTRPKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH0</accession>
    <name>A0ABV2AKH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001868</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000535">
        <property type="protein sequence ID" value="MES1920162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6331" checksum="B809B9FA2184DF34" modified="2025-10-08" version="1">MGFVKFLQIEAGAGFQRDVEITALSEAITESQRSRYCHRCCVVFVIYFGRIDAGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ2</accession>
    <name>A0ABV2AKQ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AAA ATPase midasin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">MDN1_1</name>
        <name evidence="5" type="ORF">MHBO_001947</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000573">
        <property type="protein sequence ID" value="MES1920256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103:SF2">
        <property type="entry name" value="MIDASIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103">
        <property type="entry name" value="MIDASIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="655"/>
            <end position="842"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="530"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="655"/>
            <end position="672"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="684"/>
            <end position="693"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="718"/>
            <end position="736"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="737"/>
            <end position="752"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="769"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="779"/>
            <end position="796"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="797"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="812"/>
            <end position="826"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="842"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="842" mass="98582" checksum="E7E31EAD6DD2679F" modified="2025-10-08" version="1" fragment="single">YSLKNEIKEILEICTNLRKKQIQKWADSVEKTEKEISLKALNSFFYLYPLLMDNDVEQNNAVFREIEKFIISSKTGHFRDKRRLLLFFAKLTNSQKLENLFCYYAHWDTIITEDVLRDKKTNLCTEIQDAIKLSSWDNKSYWRYKESISKLDSKIKKRIEKWRTDITSENSEQIIFFKSQMTEKVFPDKILSEQATKRKSPKDEKCEKSNRKIEEANLVLSKIILSTLQFQRKNTSKAEKKRALLILFSKMKLIKFGKNSKKLPIFRDSNFLETLNCEHFFTNKSDLIKLVKSAETAYFDNIRKMGTFKQCLQNCNSDIGASEKNMFLKISDNLMDSVVKQRNEIAQFLEKIVQILRFLSFFENCEKMTKNVKNCDKIKIFTNLENFTLLTNKIEKTKLVLIFYKTIFKNIVKNSQNSNLAKIVKIADSFEKATDQIDQILNFSVVVTTEISKFEVRHKYFPVDFLVFDIESAQKMKKCLLDFCFELNKIKNVEVLTEESAIARVISELVATIGALKMEKIVDFEQITGKNAIREKIDSLREKIELEKKRIEENRDNFRNESIYSSKNFVENFGQLDFIDDINSFAKFLRKNKICIFGNNNEKSFFVKFILALRNFKDFAIDLTFEATKFHITTNNLANTILSLFSKLSIDGFGEKDDKTDETETGKTEKLEGTGLAKGIGDNDVTDQLDNEEQILGLKNDIENDVEENEAEEKNDIEQNDIEEGATIEGDFDETSENERIEMSENERKEISENEFEDDLTNEIANEQNIKDDAKKIEDSEDLKEDSDFIDFEQFEQNDQFDQNQQNEQNDQFEKNDNNINEKDNLSNEEIEEINEKTTDNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR8</accession>
    <name>A0ABV2AKR8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Arf-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001968</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000584">
        <property type="protein sequence ID" value="MES1920280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08831">
        <property type="entry name" value="ArfGap_ArfGap2_3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45686:SF4">
        <property type="entry name" value="ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45686">
        <property type="entry name" value="ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00405">
        <property type="entry name" value="REVINTRACTNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00105">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50115">
        <property type="entry name" value="ARFGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Arf-GAP" evidence="6">
        <location>
            <begin position="12"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="33910" checksum="D343FEAD3E8CC13C" modified="2025-10-08" version="1" fragment="single">MESEFEIIYNSKQVFTELKEKSKNKKCFDCGSNDPNWCSVTYGIFICVQCSAKHRNMGVHTSFVKSIQFDKWKPQHIKRLIAGGNEKAEMFFRKHGFHTGKLENANEMYNSQIAQKYKSLLDSLSKDISFEKPENYENFENGFKISSLDELLKKASTKTRPNNIFNENAKSEDEKIEQNLENFSETTNEKIDFFKERNEMNDNEFDKNPLIDEKANYQTDLELAFEDFDDFENEKTENDDFLLNSDHSSETNEKAKTVYQNDDFSKTKIRKKLNRKIAKKALTKKMTLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY9</accession>
    <name>A0ABV2AKY9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Structural maintenance of chromosomes protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SMC4_2</name>
        <name evidence="6" type="ORF">MHBO_002022</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000619">
        <property type="protein sequence ID" value="MES1920341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1060.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010935">
        <property type="entry name" value="SMC_hinge"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036277">
        <property type="entry name" value="SMC_hinge_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937:SF172">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06470">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00968">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75553">
        <property type="entry name" value="Smc hinge domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC hinge" evidence="5">
        <location>
            <begin position="37"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="173"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="486"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="185"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="700" mass="78925" checksum="EF582F1A884DC4CE" modified="2025-10-08" version="1" fragment="single">RRLGQQLAEARRTRDRSRASAGVLGEVLRLKRSGQLPGIEGRLGSLASIDRKYDVAVSTAAPLLWSVLVDSADTGAACVRHLKDRRLGRANFLLLDKQSHFAEVCGRRVLTPEHVPRLFDLVKTQPRYRTAFYCALRDTLFAEEIEQAVRIASSGGRRWRVVTAIGELLDASGTMSGGGRTKRRGGIEHSGQKPSGHDAGGEKLAVLEAEFDATSERLRKLSSAEKSLADRADLLKTDFERTKLKAKKLQIDLADGREIARSLELKLDKRRRLASESEEEFARKKKASAEELARAEGDLSKAEFDAKNLTEECAELESRLFESGGKDVKRAKEALAKLDNRRDAANSKLAEMNAAVSLGEKNVRRGKAKLADLEKRLSEAREALGKLEKRSTEIEAEAKKLLKAQFEEKKKRGEEQAKINARKEALADLEEEGKRLRLSLVDIEDQLKDFNVNLESNRAKIAAREKKKDELLNKIRRTEEILAEDDSEGFRRFTAPPNDLDAPPGNKNELEADAERLKNEMEEMEPNMAVIEEYRAKLTEYKSRIESLGDATRRADSARHDYDEFRKARFLMSKQTLGVYGWLLGHHEKTEGGLSTAHIGRRRRIGMRGPIRPLFRGNRVFSPPSEKKLEKYLKFVRRRKNVVLVVIGVRLAPFQTDSAVRDGRNRCCTRLQERFHCGPPHPVSAQRRAVCDCQSQTQHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL17</accession>
    <name>A0ABV2AL17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000628">
        <property type="protein sequence ID" value="MES1920357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="264"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="264"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="376" mass="42990" checksum="62210B15B6BD49A2" modified="2025-10-08" version="1">MATKNLTVFLNYKNSTVKCLITKSLKSEIQFLQTQFPGRIFPANTILINKRTKLAVSNLNDISVLSGDVISVKIPRTQSRPVPLENVLHLKTVKKDANLIKLKKFFKLDEKTFAENFIFDEKFGKDGIEISCFLELPDNISIENVLSKNNKVFEDKVIAVERLSDKTRDRYNNLKRKMKVVYVKNCPDDTVAADLRIFFPDIAIYAAHILSSGVAFLETTESQIDSLLHYNNKPNLLAGHKLELRESNYENLCEALRKSNFEAEEKKRQDHLNQKRKKSDSVTEEYSLAKRPTDFDKTGNKQNLVKNENLSSSTTKKAKYINEDFKCAKMTNIPSGCSELDVARFFDGSIQILKRCENSADFVALEKRRIGCLLRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK9</accession>
    <name>A0ABV2ALK9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">V-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002021</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000617">
        <property type="protein sequence ID" value="MES1920339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15843">
        <property type="entry name" value="R-SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001388">
        <property type="entry name" value="Synaptobrevin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016444">
        <property type="entry name" value="Synaptobrevin/VAMP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042855">
        <property type="entry name" value="V_SNARE_CC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45701">
        <property type="entry name" value="SYNAPTOBREVIN FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00957">
        <property type="entry name" value="Synaptobrevin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00219">
        <property type="entry name" value="SYNAPTOBREVN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50892">
        <property type="entry name" value="V_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="V-SNARE coiled-coil homology" evidence="3">
        <location>
            <begin position="10"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11492" checksum="59730EAB9D7A2C88" modified="2025-10-08" version="1">MAEIAITEDKIKNINGKIDDTKEIMVKNIENAIDNTEKLEEIEKKANKLNQFTDEFAQKAKVVKQRVLRNKIVTVLILVIIALFFVLMVVGISCGADLNCTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM07</accession>
    <name>A0ABV2AM07_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">GPR1/FUN34/yaaH family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002358</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the acetate uptake transporter (AceTr) (TC 2.A.96) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000820">
        <property type="protein sequence ID" value="MES1920717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051633">
        <property type="entry name" value="AceTr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000791">
        <property type="entry name" value="Gpr1/Fun34/SatP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31123">
        <property type="entry name" value="ACCUMULATION OF DYADS PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31123:SF1">
        <property type="entry name" value="ACCUMULATION OF DYADS PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01184">
        <property type="entry name" value="Gpr1_Fun34_YaaH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="67"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="95"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="141" mass="15685" checksum="60811800CDB5ECD6" modified="2025-10-08" version="1">MTQIKIIPAKAIGLFAFSLTLLVTNIFNFIWQGNKTANPLFYISLTYYVGGVLQVVCGFIQLFSGDVFYSTILTSYGAFWLSSKGLLVTEKSDHGTALFCYFVWFALTVIFAMNALKRSIVLVIALSLMGLALVFLRDRAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM53</accession>
    <name>A0ABV2AM53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Retinol dehydrogenase 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RDH5</name>
        <name evidence="2" type="ORF">MHBO_002381</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000837">
        <property type="protein sequence ID" value="MES1920740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43313:SF50">
        <property type="entry name" value="GH26015P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43313">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="257" mass="28987" checksum="2E2DEA1F8D09ABE8" modified="2025-10-08" version="1">MLIFLCALPFILYALQNLKIWNFNRNLKNRNLAKNKFIVISGCDSGFGYILARKLDSFGAKVLAICLKEKGAHKLSEQSSTRLETVVLDITDFKSVSEAMKKYKSCQIYALINNAGILDGSYIEFTQFQMYEKIMKTNYLGAVNLTKELIPLIEKNGRVVNICSSLSFESMPNFSAYSASKFALRSFTDTLRREMAFRDIKVSAIFPGLHNTNLLDNFLGKTVPKACKDGVQNGYGSSFKADYESVVNLYMKFVKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM88</accession>
    <name>A0ABV2AM88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002427</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000866">
        <property type="protein sequence ID" value="MES1920792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="288" mass="33354" checksum="BE728BA8739C9D7B" modified="2025-10-08" version="1">MSLSNEQVDQIHRKLDKLMDKTNDKTVVLSDLAKHLEKLEKTQKLGQLEIIQESVNSLRLHYDTSSKITQTTDTDLGKALKKLDQSPTQGPQSLYIEHALENIVNLLKVYATSMLPPESINVENCKDPKTLVMCKLKYLDLKKTRQDQMDTKDLIFKLVKSLESTQRKRKFYEYLGYYFLVDDGELEDLEISLNKICECCPIYIKEEIIQNIIDFGITGNSDQILDNVKSLTFQLTSMGYIMEDLTPLIPPLITEKPTDSEADQLKRKMIEYVRHVRKPVSYQSIMFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMC0</accession>
    <name>A0ABV2AMC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002423</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000864">
        <property type="protein sequence ID" value="MES1920787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="112"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14125" checksum="6B2A73E2CAD16B6B" modified="2025-10-08" version="1">MQIARANNGVEDYNENDYSYAHLGNSDSFCSERKQRGRETGNEKNSDKNDDETGDRNDDASSKIKETPFECNRLVSGAPSPGKNDLAKSDNEKNCAENNKNSGFDNNDPENNDNINKNNVSDDNIDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AME7</accession>
    <name>A0ABV2AME7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ribosome biogenesis protein BRX1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">BRIX1</name>
        <name evidence="6" type="ORF">MHBO_002147</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the BRX1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000693">
        <property type="protein sequence ID" value="MES1920482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10480">
        <property type="entry name" value="Probable brix-domain ribosomal biogenesis protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007109">
        <property type="entry name" value="Brix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026532">
        <property type="entry name" value="BRX1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13634">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BRIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13634:SF0">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04427">
        <property type="entry name" value="Brix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00879">
        <property type="entry name" value="Brix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50833">
        <property type="entry name" value="BRIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="Brix" evidence="5">
        <location>
            <begin position="8"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29731" checksum="ED5832D07B4106E6" modified="2025-10-08" version="1">MAESDKNNNVLLFSSRSINFREKHLLADLRSLIPHSKKEQKLDPKSKLTDINEISEMRNCQNVLFLEAKRDFSLVWLSKSPNGPSVKFSLQNVTTMGELKLSGNCLKGSRPILKFDKIFDDHQHLKLMKELLVQTFSTPKNHSQSKPFFDHVISFSFLDKRIWFRNYQFVFDENVKDKISSLVEIGPRFVLKPERIFSGSFYGATLWQVKKDDLKKIAQLKEAKAFRIRKKSKAKTKKYKKEAILPKNELDSIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK0</accession>
    <name>A0ABV2AMK0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Lipocalin/cytosolic fatty-acid binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002272</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000770">
        <property type="protein sequence ID" value="MES1920618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012674">
        <property type="entry name" value="Calycin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000566">
        <property type="entry name" value="Lipocln_cytosolic_FA-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08212">
        <property type="entry name" value="Lipocalin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50814">
        <property type="entry name" value="Lipocalins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipocalin/cytosolic fatty-acid binding" evidence="1">
        <location>
            <begin position="6"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12739" checksum="D9417C0FDAA317F9" modified="2025-10-08" version="1">MCPITKGKAFVVNSSDTSKLNVLFIPLIMDLPPRFLKIFVKMGNYWILKVITRESGSENYDLAYVASPNRKYLWLLSKTESVTEQEYADFIYYAQTNNFNLTNLRRIRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMN9</accession>
    <name>A0ABV2AMN9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002526</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000952">
        <property type="protein sequence ID" value="MES1920916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="300" mass="34903" checksum="C0D6843870F97CFF" modified="2025-10-08" version="1">METFVARKPKSVFQFDAKLGPTEYAPPPPTPPRNQTAKLNQKPLKKYSRLHKFIVTKEKMDKIALKLNKWESDIRGKTPSRMNKKHLFVCKTLLDLIIKTKKELLFTKKLSPSLLNSLKKINNWMTIFNSATKNSEADENEPTPNHVKIGSDKLVFLNAENRFPEKSGKKCGEKLQNEIDFLEKCGLKFRIKNVKDDLTVLSLFECFFVYQQNANFFIIDPISRRIAECPILKLKVGKPNSKNIKFGSIEFSEKTDFPTSFKRKLEFVFRREYSNASKFDLFEISMAFSRLVEKFSIIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY0</accession>
    <name>A0ABV2AMY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DnaJ subfamily B member 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DNAJB4</name>
        <name evidence="3" type="ORF">MHBO_002629</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001034">
        <property type="protein sequence ID" value="MES1921028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10747">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051339">
        <property type="entry name" value="DnaJ_subfamily_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24078:SF553">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY B MEMBER 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24078">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chaperone DnaJ C-terminal" evidence="2">
        <location>
            <begin position="89"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="29201" checksum="CE653A412F609445" modified="2025-10-08" version="1" fragment="single">KKRKIYDQFGEEGLKSGAGGNPGYNFENSDVFSQFFTKGGGARNFSSFSSFFGGDLGDIFFESSGTRNRNKNTFSFGGNNRFRQKPSPIVHSLPCSLEDLYKGCTRKIKVTRKRVNARGAVEDEVKMLTLDIKRGWKEGTKITFEREGDQLGDGVEAADIVFVVKEKAHARFSRSGNDLTKPLRCSLKKVLSGFVYSLETLDGQKVNVKVPSFSLIPEKGLKHRITGYGMPISKNPNQSGDLILEIAVKLPRLNKEQLQMLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE0</accession>
    <name>A0ABV2ANE0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002757</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001140">
        <property type="protein sequence ID" value="MES1921190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076:SF37">
        <property type="entry name" value="ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076">
        <property type="entry name" value="METALLOPROTEASE M41 FTSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA ATPase AAA+ lid" evidence="3">
        <location>
            <begin position="14"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M41" evidence="2">
        <location>
            <begin position="78"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="30619" checksum="AFA664E117D307BA" modified="2025-10-08" version="1">MLHLYSAGVQTDESVDFDRIAIDCVLSSGADIANIVNTAKISAAKNDRTVLSAKDFEAAVLDVSNGVERQSLQLGAPARRALAISESACALVSLLTKSSSRELRRISIVPRGLELSSSRSVPSSEDAMVSQSVEQLLARIDADIAGQIGQELLLGKSRIMSDSKTRCERATKLARSMSAELGMGKRLGFAASMFANENVDWRTPYLPAQTRSAIDEDAVERLKEAEERVLRLLRRNKSRLLALSEELLVRESLGRKEIERVVEEVPEDDFEVKTTNKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI9</accession>
    <name>A0ABV2ANI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ubiquitin-conjugating enzyme E2 H, variant 2</fullName>
            <ecNumber evidence="6">2.3.2.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ubc8</name>
        <name evidence="6" type="ORF">MHBO_002795</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.23" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010001177">
        <property type="protein sequence ID" value="MES1921238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061631">
        <property type="term" value="F:ubiquitin conjugating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24068">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="2 4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="5">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="3">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17358" checksum="AC052879E566E90A" modified="2025-10-08" version="1">MTSRKRKKADINKLLGKKINYNLRFEKKNSYDEFYLDFQGPKNRKWRVHVSLPENYPFNSPSIGFCTKIFHPNIDEKSGSVCLNVINETWSPMYDLNNVFEEFLPQLLRYPNTSDPLNSYAANLWEKDKKKCDMIIKKYISESKFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK3</accession>
    <name>A0ABV2ANK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002789</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CWC15 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001171">
        <property type="protein sequence ID" value="MES1921230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006973">
        <property type="entry name" value="Cwf_Cwc_15"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12718">
        <property type="entry name" value="CELL CYCLE CONTROL PROTEIN CWF15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12718:SF2">
        <property type="entry name" value="SPLICEOSOME-ASSOCIATED PROTEIN CWC15 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04889">
        <property type="entry name" value="Cwf_Cwc_15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="72"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="72"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="133"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="26127" checksum="D0E799FA6D86267E" modified="2025-10-08" version="1">MTTAHKPTFHPAVGTANQGGYRYPVRSFHLSALDLPAHKELKKRKIGQNTAEEIKQRDLLAELEMREKAHEDKLAIEKRREKPQLEQTRSKAIKAGKSNFEEELEDRTKNFDDADSYDSSTSETSESDDEEKELMAELEKIKKERKQEKEDKLENPIEKDKLNKAIEENPLLFGESFAVKARWDHDIVFRNQSRDEPKDEPRFINDTIRNDFHKKFIRKYVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW5</accession>
    <name>A0ABV2ANW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002884</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001266">
        <property type="protein sequence ID" value="MES1921348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001046">
        <property type="entry name" value="NRAMP_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01566">
        <property type="entry name" value="Nramp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="210"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="250"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="293"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="331"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="359"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="399"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="431"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="486" mass="56190" checksum="FBA4B78B7D84493B" modified="2025-10-08" version="1">MLADSMRFTDFEVLNQKFTDFAYSLYENRIKAISNLSEYKPGFFVATNLIDFWSFCLILPYFDDHFTFALFLSFVLFNGSIFQFLAIKLKIAKNVSLFKFIHLNYGRRIYLSFCITSWLAVTMKIAANFVLFSLSFENYFNLHPLFPQIFICVCIAVLLKFDFFKYEKVVLLQILIFVLILLVMIAMPFVDLEVQPGKNNNPDFDFFGKAFNIILLISSSFVPSNIYVHSHLVHPSKDKDNAKKEIANNFVKYLLSLSVCAVFNVILSTMYSGSFIAHQNAILSFKNTNSENLIFSLLVLLISFYKIINFVFSATLIAQELVDLDFPGWDFNHFATCYSFLLPAFFVFAGYILMQTEHLLHICQFVVSSTYVFLIVTLSRFTNSRKVMKRFANNNFTKVVAISMSFFCIVVVSAVSWIVFDPLKKNFLVKLVFVCLSLILIVLFLSVIVYLYFLKFKENGQKKYELMADSNEAESDYADFLISENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP41</accession>
    <name>A0ABV2AP41_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glucokinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002967</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001346">
        <property type="protein sequence ID" value="MES1921436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd24008">
        <property type="entry name" value="ASKHA_NBD_GLK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.367.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003836">
        <property type="entry name" value="Glucokinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363:SF1">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02685">
        <property type="entry name" value="Glucokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="268" mass="29665" checksum="43BA31603AB7C3F1" modified="2025-10-08" version="1" fragment="single">MPFYYIAGDIGGTNARLHLYLVPEKGDEELIAERYYKSQDFNSLTAIVFRFLSDERIEEIPNSACFSLAGPVKNGSVDLTNLGWIISEKEMENELGIKNVTFLNDFAANGYGIQLLEEDELFEISNNKVPEPNGPKIIIGAGTGLGEAFIFRKDSQSIVIPGEGGHTDFAPRTKVEFDLMLYIKKKLNLSRVGVERVISGPGIEMIYWFFVDNNPGLENKEVSDIIRSDSSPGKTITKFAIGKEDIICEKALKLFIGCYGAEAGNMAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP66</accession>
    <name>A0ABV2AP66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002989</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001364">
        <property type="protein sequence ID" value="MES1921455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="173"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="230"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="203"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="235"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="353" mass="40491" checksum="23D1C00B2A347B1B" modified="2025-10-08" version="1" fragment="single">MYLSLPVPQPNNQTFSIYFVSNSLALVRFEVEMQKSNKVSDLLDQISKRTSLRHRFNGNSSSTSAVLVAAIFSTSSTLKSVLSPKQPLFDAVGKKLLVFENKQTLLEQLVAPDFDGSERLIKDDFTNLKNLNPPQTLAKERFEEKLGSKNTVVYVEEEKLHNGNDRKILMQNLNEEDTENPNPDNTDSEIKIEENDNVGNEDNDNKTEEKDDETFSKKANGDTLKSFSKQTTKVIDSETSKTEILDKKSETSKKESWKKSFSENYSGQKNNYEEKPKKNYLSFLRRKVEKCNVEKLKQCLNIYEIEEISAPNNVLGDFCRNENDCRLKFGQILNYNNEVFFGTPFLFPYNSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB0</accession>
    <name>A0ABV2APB0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ycf1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003042</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001434">
        <property type="protein sequence ID" value="MES1921516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="105" mass="12741" checksum="36548B158CD7F97C" modified="2025-10-08" version="1" fragment="single">TILKDEQILSDNFIFEDFDIRKEIEEIEDRWKELLKSDSEKILSFSLKFWREKENLNIFVDTQIIEYNFRLDKIPIPIKSEIINFDDEKTNRHLIIFCHGYQGDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF3</accession>
    <name>A0ABV2APF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003084</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001476">
        <property type="protein sequence ID" value="MES1921555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052462">
        <property type="entry name" value="SLIRP/GR-RBP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48027">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="9"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="90"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="90"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="18251" checksum="24EE3D0C594FF9CD" modified="2025-10-08" version="1" fragment="single">DHFNKSKNNTIYVSNLPKMADEKTLKTVFSKFGKIREAILIKDIVTKESKRFGFVAFEKIDSAEKVMSQIDNFEIDGCFINVSYARSAYEPKKDPKKRNEKEFLNGNRTPSKNEVFERNPKSNRFYKKERIGRDHKKFYKRSRSRDNYFSAKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM4</accession>
    <name>A0ABV2APM4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Treble clef zinc finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002888</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001269">
        <property type="protein sequence ID" value="MES1921353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025487">
        <property type="entry name" value="DUF4379"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14311">
        <property type="entry name" value="DUF4379"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Treble clef zinc finger" evidence="2">
        <location>
            <begin position="115"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="14"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23622" checksum="122551A67DF42DAA" modified="2025-10-08" version="1" fragment="single">IIFEEFRFAKNNELKQLSDKSKKVTEQISALEEKIKIIEKALLRSKAKLAPRQILKIFDENSHSKWAKKFEPVKSIYDLNKTITEDGEPFEPLSRHKLAQKKEWSNSLQNKNSKIAEQWDGKFNKNLPWTPHNTHYRGSLVVYWKCPAGKDHVWQSSVRSRTSKKAKGCPFCENRKVSETNSLANRFPQIAKYWMKKLFIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV7</accession>
    <name>A0ABV2APV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003224</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001639">
        <property type="protein sequence ID" value="MES1921694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="7749" checksum="2B8327F853EC2172" modified="2025-10-08" version="1">MQMVSIQFPLMCEVIVIAVILLMNVLVQQVVVKYLLNVLMQMVSIQIPLCEVVAIAVILLMNHLLIALM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX3</accession>
    <name>A0ABV2APX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001661">
        <property type="protein sequence ID" value="MES1921710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="87"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12347" checksum="7ED91CD68D31D6B8" modified="2025-10-08" version="1" fragment="single">MDVLEDDENFNDSHLQLNRSKPLTNLKPNPDFDIDILKTSFIDTKMARQRFQNFGKIQRPEIDLEERPKFTDLDKSKKIVVMKPRTRNKENKKSSNKRSLLDKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK9</accession>
    <name>A0ABV2AQK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Protein phosphatase PP2A regulatory subunit B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PAB1_2</name>
        <name evidence="6" type="ORF">MHBO_003472</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001976">
        <property type="protein sequence ID" value="MES1921946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="31"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17028" checksum="E950526A7112E9D6" modified="2025-10-08" version="1" fragment="single">MSTATTNTERENAAETTTSTPHEPKKTSNRASLYVGDLPETVMEQRLFDIFNNVGNVSSIRICRDSETFRSLGYAYVNYHSAMDASRAIDNLNFLKIDGREIRIMWANSDSSVRKSGVGNIFVKNLDDNIDNKILYDTFSVFGTVMSSKVAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN1</accession>
    <name>A0ABV2AQN1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003258</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001687">
        <property type="protein sequence ID" value="MES1921728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12827" checksum="B908124DEDAC0BB5" modified="2025-10-08" version="1" fragment="single">DKSFDFDDPTEIEEVRVERKRKVEEIDENSVVFEKAEIESLDFSESSSDREPAKREVVLLRKNNPKNFTFIGVVERSRPQLRKRKKRRRIWEPDSFDGDDYESFVND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR1</accession>
    <name>A0ABV2AQR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003499</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002011">
        <property type="protein sequence ID" value="MES1921972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="13597" checksum="2B944B51AA87C1A5" modified="2025-10-08" version="1">MKICVYYLQGMLCIIFIISFVSDGNAFYVPRPGPLQNESYDTTLETAVHKSLSTNIDADVVSQGTRSVGTTDAFKSQDADPSLSLVTGSGDAPGVTVSGGLEDDTKDAGINSQFMNDINCPLGYWCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX4</accession>
    <name>A0ABV2AQX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003466</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001965">
        <property type="protein sequence ID" value="MES1921939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12409" checksum="5633FE6C4E73DDB8" modified="2025-10-08" version="1">MFTSGKPPRETNQKKANQMLQTQTRRQVLEEIESIKSKQKNKKSKSVKFGEIESGGITEINLDKILNNTDNEKSVKSSKKEIVKKNLIQMIKDKLTEKINSILNCKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ0</accession>
    <name>A0ABV2AQZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcription-associated protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">TRA1</name>
        <name evidence="1" type="ORF">MHBO_003607</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002200">
        <property type="protein sequence ID" value="MES1922090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046805">
        <property type="entry name" value="Tra1_ring"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20206">
        <property type="entry name" value="Tra1_ring"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="415" mass="48335" checksum="7CF2D0F708DB266B" modified="2025-10-08" version="1" fragment="single">MLQKAYLTNTEIYKKIYFEQLSLIFETAVESEIIKLVLRNLTKDVNENRSKDQIESLLLKSTSLWKLQNRNRDIFETYLLTVLLFLETFADEEIYKSMRKFFVLGLSSRKPDVANRFCELLVRFAPKSAHSLLSHLFEEDTLQPLAKTYWLRHVVRTVLTSVGKTFKAVLYKRFSLKPVRCAETAPAILVVPTSQLEKQHFDFCKTESSEKENFFLTAARFFSASEMRKVTVSLWKSLLPSLWRTFTKKERETFSRKVNSFLTSIWLENGSEKDCSEAIKDFLGGLAECLEFKEEMFMADLEGLVLSFVAKRHLAWYETVAILQKQYRSLHSHDVQKRFSKLSAYSTVTNEIQRQTSFYLKRILEDLSESGAVYALWTFDHASHSSIKGLDFKLFGMWENGQNAFTDLIDADEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR63</accession>
    <name>A0ABV2AR63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003669</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002293">
        <property type="protein sequence ID" value="MES1922153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="154"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="327" mass="37712" checksum="3FDF037725CE9F3D" modified="2025-10-08" version="1" fragment="single">MASISSFKKKANGYVVKLDSLTDSSFETSILFTEYSIPTNKLKIYNLAKSLRNEQNATKPQIQDIFSKKLEKILTDFDQNLGDPNLENRKLVKNETKTVLKTVLDKLSEGFSIIETMTIDKPILQFIQTISETTDKQIFGILKNFLSSNLPFYLTKNENELNAMNEYRNKLKREFVEAKQTKNVKKALAAKEGGQETCKKMMKQNRIVAEKLRNSKERIELRGLFNKLVKFDEKRFDCEKTEKAGESDIENLKRSFKDLVGKSNLRISDLKAENKIKMGLIKKLPPKSMLTIEESIKLELDRMNNVFENKIGIISNQKEIDSEEDKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE2</accession>
    <name>A0ABV2ARE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003754</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002461">
        <property type="protein sequence ID" value="MES1922247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19268" checksum="1D4F7F630AF77784" modified="2025-10-08" version="1">MLKTIGIPVNGQNEPVLKIEDFKKIVDIAKMIRLWDKLNDMVLIDPPRTLVRMDNDVQITKDQSLRELIIETPRTLDSMIDNVDDSVCSNILLKLPEYNDCLYTDPFNQFGLDVDMYDTTKVLGASVKRLHDTSVDLVKIFYKDLKQPKMHLDDFTSPVLIFLLLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE9</accession>
    <name>A0ABV2ARE9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003564</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002140">
        <property type="protein sequence ID" value="MES1922049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="9795" checksum="047A53BB78D7F380" modified="2025-10-08" version="1">MKIHTHIVNNCSAFIDCHIYVFTWGRRGINTRKVVTEKCMGDRGSICNVRVYVECQGMFGMSGGSAWNGMGVFEILGEWISGESVCNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH1</accession>
    <name>A0ABV2ARH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein kinase domain-containing protein ppk32</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ppk32</name>
        <name evidence="2" type="ORF">MHBO_003522</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002059">
        <property type="protein sequence ID" value="MES1921998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051177">
        <property type="entry name" value="CIK-Related_Protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984:SF6">
        <property type="entry name" value="SCY1-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12984">
        <property type="entry name" value="SCY1-RELATED S/T PROTEIN KINASE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="277" mass="32037" checksum="0AAFD523B18273D6" modified="2025-10-08" version="1" fragment="single">NFNKKESLVFEEFSETEIKNGIRQICEGAMYCHDNQISHSNINPSSIFISPSRDWKLAGFEFSRSIESGRAAVGWDYETFSTVTSPLMPPINFAAPEIVQHKEIRSKSDAFSIGILAICLYNFENFSEFKDEISSFSDYAAFLDLLENNSYFDGKIDFQKNKKSILINLLKVDSEKRFSIQDFLDSDFFLEKELIVLRDCEHFSTFNETRKTNLLENVSQNLSLFNEKIIVLKIVPVLTSALEERELCLTSLKSIFWIIEHLSEKRNFKEKILKPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ9</accession>
    <name>A0ABV2ARJ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">S1 motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003800</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-2-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002532">
        <property type="protein sequence ID" value="MES1922291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04452">
        <property type="entry name" value="S1_IF2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.190">
        <property type="entry name" value="Translation initiation factor 2, subunit 1, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044126">
        <property type="entry name" value="S1_IF2_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024054">
        <property type="entry name" value="TIF2_asu_middle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011488">
        <property type="entry name" value="TIF_2_asu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10602">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10602:SF0">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07541">
        <property type="entry name" value="EIF_2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116742">
        <property type="entry name" value="eIF2alpha middle domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="4">
        <location>
            <begin position="25"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="26095" checksum="83D3B5E1E24E4022" modified="2025-10-08" version="1" fragment="single">MKKNKKNSVKLPEFRMYRNEYPKIDDLVMAKVTRIEDTGVYLSLLEYQNLEGLMMHSELSKRRWRTVSKMVQVHRQEIVMVMRVDREKGYVDLSKKRVPPTERSRFLERYKNSRKVHSIFRQVCVKCNFSIEETYKSFGWQLYDDFPHAIDGLDYLNTYPKEFLEKYDVPNEIKNSLIENVSHRLTKKKRKVRALFEINCFTPSGILSIRKALEQGEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK1</accession>
    <name>A0ABV2ARK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Phospholipid-transporting ATPase IB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ATP8A2</name>
        <name evidence="5" type="ORF">MHBO_003544</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002102">
        <property type="protein sequence ID" value="MES1922028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF150">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="19328" checksum="C1AC70FCE04C7D54" modified="2025-10-08" version="1">MRLYQMYFINKDEELTSSNVFKNKNLKRKHEKVFSVVRNSSLHEDLGQVSFLMSDKTGTLTKNKLRLKKIFVDGKKFAASQNRELKTKNFCSVRESKISRSNFTDYVKSGNNVIKEFLTLLSVCNTVYPKNHCEALDFNNNLKKLHVHVDNCYSCHLRTYLKKFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM0</accession>
    <name>A0ABV2ARM0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002585">
        <property type="protein sequence ID" value="MES1922322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="10441" checksum="1B76AD3DCBA8E541" modified="2025-10-08" version="1">MNDTITIPANIAMTDFAGNIKMTLIIECAQSHGDSISIPYYYFYSVTPLAGYKEVGGIVNPTLFAKVDMTNVADAVFAAKAAASGIHPTTNIPLIDGGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM3</accession>
    <name>A0ABV2ARM3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003576</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002154">
        <property type="protein sequence ID" value="MES1922058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8075" checksum="76C7475511EA7B30" modified="2025-10-08" version="1" fragment="single">ILSKKLKIKGVKVRNKEKSCFECANGNSPKSNHVCEPSCVIDFTFVFSNSDPKIVFNYKSKGLFAINDVQSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ0</accession>
    <name>A0ABV2ARQ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cytoskeleton associated protein 5, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CKAP5</name>
        <name evidence="5" type="ORF">MHBO_003859</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002642">
        <property type="protein sequence ID" value="MES1922352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045110">
        <property type="entry name" value="XMAP215"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048491">
        <property type="entry name" value="XMAP215_CLASP_TOG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12609">
        <property type="entry name" value="MICROTUBULE ASSOCIATED PROTEIN XMAP215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21041">
        <property type="entry name" value="XMAP215_CLASP_TOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XMAP215/Dis1/CLASP TOG" evidence="4">
        <location>
            <begin position="4"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="141"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF21041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="298" mass="33886" checksum="17D8BBF03C260993" modified="2025-10-08" version="1" fragment="single">MTGIEMALNIFHKTKQTEQLLKILEQIGLKSKKPIVVSSTVKLLKLILERFGDAKIGRPFYKEHIESIFMSTNLQVRKEALELAKEMFKWGGTDFLDFQLLEKLKKSQISALKEAIKNIKPNSATLDSKISDKLPRKMIESSQEKMNPKIKNSEIQINSENKNSKMNSEESSEKTSKVDVLSQIGVDENWIDAIYRGKWRERSEALLRVTECAKKAKNLKSGPFTAPFVEALGFCLKDQKAMIVITALKTLTPFARGLGKNFAVFAKKLFLEVLFKFKDNKKAMEIQCREALSAFVES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS54</accession>
    <name>A0ABV2AS54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclin-A2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">CCNA2</name>
        <name evidence="4" type="ORF">MHBO_004021</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the cyclin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002976">
        <property type="protein sequence ID" value="MES1922504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd20537">
        <property type="entry name" value="CYCLIN_CCNO-like_rpt2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039361">
        <property type="entry name" value="Cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004367">
        <property type="entry name" value="Cyclin_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006671">
        <property type="entry name" value="Cyclin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10177">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02984">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00134">
        <property type="entry name" value="Cyclin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0195">Cyclin</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclin-like" evidence="3">
        <location>
            <begin position="90"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="291" mass="33821" checksum="A2374FFDB2BFDE0D" modified="2025-10-08" version="1" fragment="single">MTSIYKRKEQLKRLKSKKFPFSFHPEKIPSSQKMSQDIQKRSFGDMFLFKEGEKAILAHLKKVEMARRPKQNFMAAQQDVTVKMRLVLLDWLSEVSSSFRLGTDCLFLAAELIDLFLSKRKVTRSRFQLLGCAALFIAAKFSEIAPPVARDFVYVADSAFSHKDLYEMEILVLKNTEWSLSLPSHSVFCNHFFGVAKTNEKQRHFCWFLLELSIFETELSSTAPSTIISAALFAALHLRDQCRQESIKQSKIWRKFLANGNVGVKEKRCFEENKFLYKRFGRVSKEIAIFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC1</accession>
    <name>A0ABV2ASC1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GP-PDE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003775</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002493">
        <property type="protein sequence ID" value="MES1922267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46211:SF14">
        <property type="entry name" value="GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46211">
        <property type="entry name" value="GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="1">
        <location>
            <begin position="1"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="24691" checksum="DDFA179D3713C51E" modified="2025-10-08" version="1" fragment="single">TNGVGKVCDFTLKELLSFDAGYKYKKIDKNGTKIFPYRNKGLKIPQFEEVIIALKNNKNKYGFPLRFYLDFKSKLIIKTALDFIKKQDLSQRVILGANNYSVNKELLKFRNPRMPISCDLWTGILVIILSKLGLLDYYHLKHDIYGSYESGNFIQFTEKRFIEKIHKRKKFYAVFGEKMDDSNFIQKMFDSNVDLLLTNKPKTMKRIIDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH9</accession>
    <name>A0ABV2ASH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Mitochondrial presequence protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">CYM1</name>
        <name evidence="1" type="ORF">MHBO_004144</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003269">
        <property type="protein sequence ID" value="MES1922626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43016">
        <property type="entry name" value="PRESEQUENCE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43016:SF13">
        <property type="entry name" value="PRESEQUENCE PROTEASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12703" checksum="B598E1B771E5294D" modified="2025-10-08" version="1" fragment="single">MFAKSKNLKICCLKNKRAFSASSEKFKNGQKLNNFTINKIKNFKKFNLNLVQMTHRTGANYVHISAKDNNNVFGIAFKTPNYSDNGIPHILEHCVLCGSKKYPINDPFMKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK2</accession>
    <name>A0ABV2ASK2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004134</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003241">
        <property type="protein sequence ID" value="MES1922617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="43"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="33443" checksum="8DC56C6C1CD9AA3D" modified="2025-10-08" version="1" fragment="single">EDKDQESPPAATTEEDKGQESPPAPTTEEAAKKSPPAPTAGKAAKKSRRKKKSKNRRKTTTKSFPDIEAEEAAKKSPPAETTEEDKGQEFPPAATKAAGFSSPMDFYQALMEDLLHETIARPKLERYTVVFNDRTVDLIGAPLSSFLNVKFATEMELEIFLVNLLKSIYARNEACGKSYKEIKLSNAFVTIHPFYGLIFNFETSEASGKLSMDTIFEKFLTFLKELKSEWTVYNWKIVHVLEKAVSKKDKKKKDLDAFLLQFRCPGIKDIYKPIAFPLMIARNILFKALGYTVFLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW7</accession>
    <name>A0ABV2ASW7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004197</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003394">
        <property type="protein sequence ID" value="MES1922674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17425" checksum="FF152DDA11BD95CD" modified="2025-10-08" version="1">MKKQQQVNNDDKTTTIGEDNDESDSFWSNLEISDEDNSLINLTDKKAKEAKKEIDKQIQKTTQNVTLFKIKIKFENNIIAIKTENIDKTDSVIDIAREKTAKKADKGKDGLNKENQQTPTFESIKERCERALRKVFENKINKATKTIINFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX2</accession>
    <name>A0ABV2ASX2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004291</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003632">
        <property type="protein sequence ID" value="MES1922768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050746">
        <property type="entry name" value="DAACS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958:SF63">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958">
        <property type="entry name" value="SODIUM/DICARBOXYLATE SYMPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="93"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="166"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="217"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="30004" checksum="185F38EF482D66E5" modified="2025-10-08" version="1">MSIRNFSQKVLNGVHNQFIYPHEATQTLLSIVMSIGLGLFTRQCNIPKHLFSFFGMIGTVYLNLLQVLIVFYMPTKIICASFKMAKARNIFRILLLTVFLFFLSSLVMSALSLLVILGLLPHILPLSDDEIKESLSGMAKYSIKESMLGIFRRAFPDNYVVAAKNNNIVAITIFSVLFGISMSRKLKSLKLVKGENIDNCKKYFELADDVFGEIIDLIIKYTPLGIFSVIFVQILEINDMTVFLELSMLALGYLACFYFDYFFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT53</accession>
    <name>A0ABV2AT53_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004285</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003621">
        <property type="protein sequence ID" value="MES1922764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.60.10">
        <property type="entry name" value="Zinc finger, CCHC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00343">
        <property type="entry name" value="ZnF_C2HC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="Retrovirus zinc finger-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="2">
        <location>
            <begin position="25"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="CCHC-type" evidence="2">
        <location>
            <begin position="52"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13411" checksum="B6CEF5F85DB24877" modified="2025-10-08" version="1" fragment="single">QSEIARMEQMKELALINGTYRFDIRCKECGEMGHKDFQCPQRQNTYFANVQCEKCGEISHVTSDCPQKGIFESTKNEMNYEYEQFLAEIKGEDPSKVQERLDRESQILDKQKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT67</accession>
    <name>A0ABV2AT67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004391</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003914">
        <property type="protein sequence ID" value="MES1922863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="26352" checksum="C6A2B3288DA89787" modified="2025-10-08" version="1" fragment="single">MTRIIGSGNPNYGVVQTNSYLDRTESLPVDQIVLTAMGTVLNIPSNRAETHTLRVNEQIAIDGEMLAPLNPNILNGERIISPKASVTSMKPQVYGVTIVVSEHTRVNTPENIYASISTLLSGYEMRLKEAIIYNALLTANLVDYTFSQGGTASPMKANVRDLIEMTSIMERNKVGACLSFIPADANTYTRSVPTRYAMVASIAGATAIKKNLSPEEFTQTHRFANTKSYEFPSKGTVERAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT93</accession>
    <name>A0ABV2AT93_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004332</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003783">
        <property type="protein sequence ID" value="MES1922809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7472" checksum="70E0E0A06E59DD2F" modified="2025-10-08" version="1">MFPTAAVDVPEHIATQARHILNPPPAPTKPVSEALRSPPRVRVLIRGKIVQVRFLEVMLIKLYYTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB8</accession>
    <name>A0ABV2ATB8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004247</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003511">
        <property type="protein sequence ID" value="MES1922724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15322" checksum="35161C980A227F84" modified="2025-10-08" version="1" fragment="single">MLYEVLVHVPEAYADTHKFKTGTKIFVENLTNDVVNTIRHGEVKEVPVFFDSILLRGDEIYFHHNVIRETIDWHGKEKTGMYDFDKKNGLYRCPLDQIFAIVRDGKFIAIDPYCFVKPVPQEEIEDKNGFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM5</accession>
    <name>A0ABV2ATM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004156">
        <property type="protein sequence ID" value="MES1922959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="7644" checksum="C9AA7152D7D47F38" modified="2025-10-08" version="1">MFLAGSDISANGVLDMGETRGIQRKPTSRNELPKYPSHKSTAGPANPDIAAPHPTHPSISYPDIIEINPHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM7</accession>
    <name>A0ABV2ATM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004554</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004388">
        <property type="protein sequence ID" value="MES1923020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17671" checksum="6C52E08851671602" modified="2025-10-08" version="1" fragment="single">MSVRIPSHVLKETLEFRTQFYEKYQESQQKKAAMRVLGYSDETIMSILRQIIPNFASPVPDSPHLYTFEIDEQRGDLRVMTQRHSPGSLPDVKLLEVRHIQTDPFHQVCLPVYMRPTDVYMVVIDGSKRLDDRVTEGERSAVKSSFQNWTQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR9</accession>
    <name>A0ABV2ATR9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004604</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004534">
        <property type="protein sequence ID" value="MES1923068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18625" checksum="A21B53DF4A7836CF" modified="2025-10-08" version="1" fragment="single">RPMEDDETPGQPKFQRVSEEKKSPSYGSDSGSTETKATTAPSIISSRDRIIELPQPPPRSQIGRKTKVKVNCFRVHCKCEYIYQYSINCDPPLPDDSVVFLQGSIMLSNDDLLDTFGYYIFDKTKIWALKKLTEPVTISNQDMQMEFKLIKSVKLSDAPYEEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV7</accession>
    <name>A0ABV2ATV7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">MHBO_004620</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endomembrane system</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010004580">
        <property type="protein sequence ID" value="MES1923082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021319">
        <property type="entry name" value="DUF2921"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050731">
        <property type="entry name" value="HRD1_E3_ubiq-ligases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22763">
        <property type="entry name" value="RING ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22763:SF162">
        <property type="entry name" value="TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11145">
        <property type="entry name" value="DUF2921"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="13 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <keyword evidence="9 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="16">
        <location>
            <begin position="110"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="MES1923082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="19094" checksum="7F17F2EFD5EB7E63" modified="2025-10-08" version="1" fragment="single">WVPQIIHNAFYGVNRVFRKEFIVGISFCKIFFFSYYYGSKQYNLFNSHAFHGHAVLILLFLYLMAQMAILLMMDRFGPRFFVPIKWRPKKYSYFRPLPKEDVEANGRRSCVICISPIKKPESDGIMVTPCDHFFHSECLKTWMEQQLKCPICRTQLPSTED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ5</accession>
    <name>A0ABV2ATZ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004672</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004802">
        <property type="protein sequence ID" value="MES1923130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="100" mass="11480" checksum="40699688783FDA3E" modified="2025-10-08" version="1">MTINAADNVKINNLQIPKELQNRRRILITVDNSTYSAKALSFAKEHILRKNDFVILLLALKKLVFPYLITAESIRTLEDEELNKEAFALSNEVDQFGEVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU69</accession>
    <name>A0ABV2AU69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004456</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004061">
        <property type="protein sequence ID" value="MES1922927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10634" checksum="A91145EC4B8C7C9D" modified="2025-10-08" version="1">MRIEHNSDFIINLAEISKNGQKDKLFNKIVKNMEESFYYPHFRTNFIKYIKSIEMSEKNIKNLHNEMKELYIFYCYNDKLNSLIIVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU84</accession>
    <name>A0ABV2AU84_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Transketolase-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004489</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004154">
        <property type="protein sequence ID" value="MES1922958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055152">
        <property type="entry name" value="Transketolase-like_C_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22613">
        <property type="entry name" value="Transketolase_C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="TK C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transketolase-like C-terminal" evidence="1">
        <location>
            <begin position="6"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8035" checksum="208D3F8B73A53A5D" modified="2025-10-08" version="1">MMEVWYGLEVRVVSMPSQKLFMKRTVHQRRRLLPLGQLIVSLEAAAGWGWAALAHFSVSVDDFGVSGSGKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB6</accession>
    <name>A0ABV2AUB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004814</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005379">
        <property type="protein sequence ID" value="MES1923268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046042970" evidence="1">
        <location>
            <begin position="20"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16807" checksum="FA45CFCCE8E14916" modified="2025-10-08" version="1">MTNKPHFNFILLFVSCVISKSLYTAEKFDCAKYSKEIPPELFLAEHKITDGNHLYNLKCPLGKVLFSANKDQLVNSYFFCRENDSSLYLNGVVVYQYECVAYTGGMINFMIYESLIVCCTFAWANLIIRIKKNADFFNTRMDADAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC9</accession>
    <name>A0ABV2AUC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004606</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004537">
        <property type="protein sequence ID" value="MES1923069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="16"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16876" checksum="E58EA5BA2F2D0584" modified="2025-10-08" version="1">MASQTSKKCLSRDAFNRAAKLKLNLKRKEFRNLENKKMEEKLKLTEKKFIEISARKLARKVPLTTVQKIRILAEQKKEANVAKEIKSKKRGKVLKLKKIETDLRNEAKIKQYFNPLIAEFKNNSSITSENAVTSDFLYDKVSFNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI6</accession>
    <name>A0ABV2AUI6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004886</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005640">
        <property type="protein sequence ID" value="MES1923329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11143" checksum="FE330196F14B5FAE" modified="2025-10-08" version="1">MTPSISIFAIRTDPNDVDVSEERGSLFQNSCSNLLNRMYTSSSGGSNRGFSVYNENPFSVILESAPLPILKYHLRFYTFCIISRTTTVLAAACLHGNTVNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN7</accession>
    <name>A0ABV2AUN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Flavodoxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004944</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005920">
        <property type="protein sequence ID" value="MES1923380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001094">
        <property type="entry name" value="Flavdoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19384:SF17">
        <property type="entry name" value="NADPH--CYTOCHROME P450 REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19384">
        <property type="entry name" value="NITRIC OXIDE SYNTHASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00258">
        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00369">
        <property type="entry name" value="FLAVODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="Flavoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="2">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15031" checksum="E60E57F10757F488" modified="2025-10-08" version="1" fragment="single">MSSIGYNAKVVDLEEDETKNFFDKKFSVFIVATFGDGDPTESAQEFWKWIFLNKIETDLANFNYAVFGLGNSQYEHFNATGKKLFRKLKSFGANPICKLGLGDDDDDIESDFKKWKEIFFDSFKQHLKPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW5</accession>
    <name>A0ABV2AUW5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GPN-loop GTPase 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">GPN2</name>
        <name evidence="6" type="ORF">MHBO_004993</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Binds to RNA polymerase II (RNAPII).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the GPN-loop GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006149">
        <property type="protein sequence ID" value="MES1923424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004130">
        <property type="entry name" value="Gpn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231:SF3">
        <property type="entry name" value="GPN-LOOP GTPASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231">
        <property type="entry name" value="XPA-BINDING PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03029">
        <property type="entry name" value="ATP_bind_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16800" checksum="B246BB7465BD47DD" modified="2025-10-08" version="1" fragment="single">NLDPANEICPIKENIIDLKNLITVKDVMKLLNYGPNGATLYCLEYLEKNLNWLEQQLAKLDQETFILFDFPGQIELYTSHSSVQNILSNVLKWEISLCAINLIDGLMCLDVNNHISALLISLCVMLKLELPHINVFSKIDLVPEDSDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV04</accession>
    <name>A0ABV2AV04_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005174">
        <property type="protein sequence ID" value="MES1923227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="23297" checksum="79FAFB5923A20CDE" modified="2025-10-08" version="1" fragment="single">ENKMSEKSLLWKNFLSSFSKFIEKFRFCFLSFDKNEKMLLSFVSFGRDIFDFFLNKWTVFLMSENVQNEIKNFKEISSKMDKILPEIDFSERIKAFLANKADEKMKEFLENCVIEFKENLSKFDDLVQNQFYSFNNITKKIDKINEKSTKMLKVFQIANFYQIGTKTLLSLISENLFLALFKISKILCFGYNIYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV51</accession>
    <name>A0ABV2AV51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">40S ribosomal protein S24</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005096</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006592">
        <property type="protein sequence ID" value="MES1923514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00545">
        <property type="entry name" value="Ribosomal_eS24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053709">
        <property type="entry name" value="eRP_eS24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001976">
        <property type="entry name" value="Ribosomal_eS24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_uL23/eL15/eS24_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10496">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01282">
        <property type="entry name" value="Ribosomal_S24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="Ribosomal proteins S24e, L23 and L15e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="107"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="133" mass="15054" checksum="862655C7C984618F" modified="2025-10-08" version="1">MTGKNFELHTRKFKTNPLLSRREMVLAVKHPGMANVSKKTLKETLAAKYNVKDPETIVLFGFRTQFGGGSSTGFARIYTTADQMKGIEPRHRLVRLGVLEKVTKKSRKSIKELKNRKKKVRGKKKAAIGKVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV88</accession>
    <name>A0ABV2AV88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005179</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006996">
        <property type="protein sequence ID" value="MES1923583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15958" checksum="2AC1C1D359793DEE" modified="2025-10-08" version="1">MTVVSSTESCERFSVVTMFEMDNVETASFWLQTVIYSYFGLGKKEIKEMQTVLLRKKISPSLSFKMVQTICDSIVLKRNDAYNSNCLYKQQLNIYDFSPFAVSCGIVLVIILAIYIYNKRLRDREVYRLQLIGGREY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC3</accession>
    <name>A0ABV2AVC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007207">
        <property type="protein sequence ID" value="MES1923615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="6074" checksum="76F95AC42AF92610" modified="2025-10-08" version="1" fragment="single">CSTQDDDSHVTSESSNIYSSHTSEAVTFMVHIRMAEVTFIRVFNMLVHKLENQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVH9</accession>
    <name>A0ABV2AVH9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glucose-6-phosphate isomerase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005013</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006211">
        <property type="protein sequence ID" value="MES1923441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10490">
        <property type="entry name" value="Glucose-6-phosphate isomerase like protein, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001672">
        <property type="entry name" value="G6P_Isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11469">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11469:SF1">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00342">
        <property type="entry name" value="PGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SIS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51463">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="2" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="154" mass="17815" checksum="12858FA864262E5D" modified="2025-10-08" version="1" fragment="single">MRVRELLKKHREDNPLSLKQLLKDDSRDVFMTTKSDGILFDYTHQRVSLQTMELLFEFAKEMNLKEKIDALFSGKRINATEDRPVLHMALRGNKEDGFKIGDDFLNDRISKVLERIRELSTQIRNKKYLLDNGRFVKNLVVVGIGGSYLGAEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWS6</accession>
    <name>A0ABV2AWS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005266</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007434">
        <property type="protein sequence ID" value="MES1923648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11328" checksum="3F625183176F95ED" modified="2025-10-08" version="1">MIENPIKSQKYHKECAKLATAEYTKKYREENKKEEEFKPKRILNVCDSNCKDCCHSSKSGGICVCLYILDTGKRRPCKGGAGCTVKEIGNRAKELALALNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE64</accession>
    <name>A0ABV2AE64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000052</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357130" evidence="1">
        <location>
            <begin position="24"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="31527" checksum="B346155FE5254F22" modified="2025-10-08" version="1">MSMNIIQTFIILTFLGFDSFVFANRKIDDVMKTSRGLNIGGSTRKCNISQLSISNSSVKCNSRSKQIVVGEDCKIVCNRDYFLFNEKQWEFTREIHSEMTLICFDEQKFESTNEIYWNKTEWTCRPKSKNCDETNLISESEHVLLCSEESNLKTCNVSCKNGHRNNEKYICLAEEWFAYDGEKFDRMYRLFCPDPGDCFVEELHKNGLTKGSCYGYYLVSFDSMCSLICKDGFLDNILPENKNLKCNNGYFENTKNDKFDENMINCQKSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEQ5</accession>
    <name>A0ABV2AEQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11473" checksum="22E4D79EED1E2EAF" modified="2025-10-08" version="1">MEIKIKKNYSDPKGRTEILANLNCPEDKQLYLSEKETNVKNFYFLCKNGRFEFLNEEFVYFSNFSCRSKDRTDTIAMILILVICFAFVSCFASVIVDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AET2</accession>
    <name>A0ABV2AET2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">mRNA (guanine-N(7))-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.56</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ABD1</name>
        <name evidence="12" type="ORF">MHBO_000192</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a 5'-end (5'-triphosphoguanosine)-ribonucleoside in mRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:67008"/>
            <dbReference type="Rhea" id="RHEA-COMP:17166"/>
            <dbReference type="Rhea" id="RHEA-COMP:17167"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:156461"/>
            <dbReference type="ChEBI" id="CHEBI:167617"/>
            <dbReference type="EC" id="2.1.1.56"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.56" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004482">
        <property type="term" value="F:mRNA 5'-cap (guanine-N7-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004971">
        <property type="entry name" value="mRNA_G-N7_MeTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016899">
        <property type="entry name" value="mRNA_G-N7_MeTrfase_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039753">
        <property type="entry name" value="RG7MT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12189:SF2">
        <property type="entry name" value="MRNA CAP GUANINE-N7 METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12189">
        <property type="entry name" value="MRNA GUANINE-7- METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03291">
        <property type="entry name" value="mRNA_G-N7_MeTrfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028762">
        <property type="entry name" value="ABD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51562">
        <property type="entry name" value="RNA_CAP0_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 12" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-0506">mRNA capping</keyword>
    <keyword evidence="4" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MRNA cap 0 methyltransferase" evidence="11">
        <location>
            <begin position="1"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00044712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30000" checksum="6A72E9FA2648B9AA" modified="2025-10-08" version="1">MTGRKINMPFVELFVADCFNKPLKQVLHNRIPLDLVSCQFALHYCFEDEETAHKTIKNVSDCLRKGGYFIGTVPDANVIIKTLRTKGNLKNGKVGIGNKNFKIEIDNGDSSDNENDSKNGGKIKLAFPPNKKFGLRYKFHLKNSVDKCDEFLVHPETLMRLCDSFGLKCDLFQNFHDFYEETVTMQFEENDWARELFLNKVIENTKKIDKTKMFPSEDWEIAGFYAVFAFRKIDGAESKSDSFNQKFRKVRFLDKSEIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEV5</accession>
    <name>A0ABV2AEV5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000046</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12005" checksum="63C3953DB48E2D05" modified="2025-10-08" version="1">MHMTLDCKRNKGDRWVNSCAVECEKDYVIGERGKMGKRDIVKCIKGVVNTHTTKMDCRRKCTKYPDSCDFPESCIGENEYDQPFCSTSFYAKIKASVKFYPPKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEX4</accession>
    <name>A0ABV2AEX4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">D-aminoacyl-tRNA deacylase</fullName>
            <ecNumber evidence="2 5">3.1.1.96</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">DTD1</name>
        <name evidence="6" type="ORF">MHBO_000248</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a D-aminoacyl-tRNA + H2O = a tRNA + a D-alpha-amino acid + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13953"/>
            <dbReference type="Rhea" id="RHEA-COMP:10123"/>
            <dbReference type="Rhea" id="RHEA-COMP:10124"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:59871"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:79333"/>
            <dbReference type="EC" id="3.1.1.96"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>glycyl-tRNA(Ala) + H2O = tRNA(Ala) + glycine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:53744"/>
            <dbReference type="Rhea" id="RHEA-COMP:9657"/>
            <dbReference type="Rhea" id="RHEA-COMP:13640"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="EC" id="3.1.1.96"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the DTD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.96" evidence="2 5"/>
    <dbReference type="EMBL" id="JBDODL010000033">
        <property type="protein sequence ID" value="MES1918251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.80.10">
        <property type="entry name" value="D-tyrosyl-tRNA(Tyr) deacylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003732">
        <property type="entry name" value="Daa-tRNA_deacyls_DTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023509">
        <property type="entry name" value="DTD-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00256">
        <property type="entry name" value="D-aminoacyl-tRNA deacylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10472:SF5">
        <property type="entry name" value="D-AMINOACYL-TRNA DEACYLASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10472">
        <property type="entry name" value="D-TYROSYL-TRNA TYR DEACYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02580">
        <property type="entry name" value="Tyr_Deacylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69500">
        <property type="entry name" value="DTD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0820">tRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00047676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00048018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18922" checksum="C2A84C2A770CB72C" modified="2025-10-08" version="1">MKIMIQRVKKAHVRIQKTNEKISQIGPGICVLLGIHKNDTEDFIEKMAKKCLNLRLWPDGEKNYMKSLQEMDYEILVDQINKIAKVSQFSLYSKLKGNRLDFHDAMKSNLAEDFYRKFIDYLKENYGFEKVKEGKFGHRMEVGITNDGPLSMMIEKRNEKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF16</accession>
    <name>A0ABV2AF16_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000002</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May play a role in mRNA splicing.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of a tri-snRNP complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SNUT3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013957">
        <property type="entry name" value="SNRNP27"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31077">
        <property type="entry name" value="U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31077:SF1">
        <property type="entry name" value="U4_U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08648">
        <property type="entry name" value="SNRNP27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein" evidence="9">
        <location>
            <begin position="53"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1917963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12825" checksum="1C7D201CE173FDB6" modified="2025-10-08" version="1">MANDKKRKRKSKRKRKKEREKEEKAKKVIAKIEVIEQRGNNKELSELENALKKQNEMMKKMGLPVSFESTKGKEVPEANASAVRLRSKRRYRQYMNNKGGFNRNLAPSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF44</accession>
    <name>A0ABV2AF44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000029</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1917993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9196" checksum="24E63EDC4D989F56" modified="2025-10-08" version="1">MAKFDKVQVVHIDGDNFYMLKTNQDEQSIDEKANENLVDLPKDVATNEDNSPKSGNDDFLKEDNNPKSDNDDFLNEDQKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF77</accession>
    <name>A0ABV2AF77_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cyclic nucleotide-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000136</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="cAMP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="312"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="571" mass="65498" checksum="EE0A693B39E901F4" modified="2025-10-08" version="1">MVFHICGIVVLTLVINGSTIQYVLKLLKIKSSLYQSDFLIKSSLEHLAKKSDHLVNVLSQNNHFTGANWLELRNSIPDYSRLLKTENYGIGGQNEHSVESNIRYRFICSMKSFYWKQHQDGLINSHTYNILNDAAEASIDCNDIKEQWTCIKKHFKYPRWYQFLHSKRFFKNFSHKSIFGIILETVQLSTAFIFAADRTGIIVKKFPEWKSNLTDKVFAEIKAAEKLAELEIHRIQKTFPEIYQSIQSQKASVFVLNSDIKNINRLRKDGIIQTSECEEMTDRVNTFIHKVGSCYKIPAKINTFLLFSNLPFISVFDEQTKHILFAKLRYKVFSEEETLYTEGKNKNSFFLIVRGLVKINTSDHYERIYGPGSLINLWASLAESTSISTCRAQTTTSVLKVPKTVIHSILRERTTEEIAWKCAAFMMMRMLFTTRLELESDHVKLGEICLSSTFRKFESDTDELVGSKVLLLKGKDVVGKVYIAPALIQSIQTKSLQRINSVTVNRMRVRFSKSVALILDSKGSPFRQTLEDIANVSEESMSELNRNESLGLIYIKGSTESTRTHLSSTNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFC9</accession>
    <name>A0ABV2AFC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000049">
        <property type="protein sequence ID" value="MES1918373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19184" checksum="1875CF3E790B47B6" modified="2025-10-08" version="1">MILILLFHNFVTSEIENCTCNLKSIELVERINKFRTDKTLAKLLLSTQSCFLSQKFLNFGFTPQNKNCFDEPAEFFLSDSSDVERVIANLQNDDCFKYIFTDDKSVKDYKYVGAHCSDDKSLIIFSVDESDKIFCNDASVDPNTDSGTITSRNSFSCILLMDLLLIMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE8</accession>
    <name>A0ABV2AFE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000356</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000052">
        <property type="protein sequence ID" value="MES1918385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12786" checksum="52463F07BF51F6FD" modified="2025-10-08" version="1">MAQIISEKKSKTDTISKNAENERKIKRLQRTIVRRSMENLLYKRRLRVSKNEIKHDRECYDCEMKKIFRETVMFSIESNNIQNLINQKLAEKCKKSQIKQINKPEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI6</accession>
    <name>A0ABV2AFI6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NAD-dependent epimerase/dehydratase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000399</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000061">
        <property type="protein sequence ID" value="MES1918431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13728" checksum="0D89CE1FA7BFC2AF" modified="2025-10-08" version="1">MVKNILIAGGTGFLGSRIAKDAIKRKFVVTSISRSPVKNVLKEVNYQFCDLAKISCSDAIGENKLGSAKTDFFDAGVYSVGELFGLKEKPFLRKLLFPFLFSYYYKNNVILTFQCKIFHLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFN1</accession>
    <name>A0ABV2AFN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Mitochondrial processing peptidase alpha subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000426</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Substrate recognition and binding subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000065">
        <property type="protein sequence ID" value="MES1918460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050361">
        <property type="entry name" value="MPP/UQCRC_Complex"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11851">
        <property type="entry name" value="METALLOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11851:SF49">
        <property type="entry name" value="MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M16 N-terminal" evidence="3">
        <location>
            <begin position="65"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M16 C-terminal" evidence="4">
        <location>
            <begin position="217"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="487" mass="54265" checksum="380CA1AECECF9EF5" modified="2025-10-08" version="1">MLSKFAKKHYIKTNNIRFRTFFTGKSSMPRVELTKEFPIESNLNPEKKLSMDPVVSKLRNGINIASRETLSPMASICLAVKTGYTFEDKHFYGRTHFLAKTAFTSTEETSTFSINQQLERTGAKINTLVDRDGILYNVDVLKKFVPTVLHIMSDSLFNPAFHGHELNNICFNHQNALKEIPSDQQLEDDIHLAAYGLKGPGLPLMAPRAILDKMRKPQLVDFHSKLMRPERISIGAMGVDAAAFKNSAEEFFGGKKSSEKKETEDFKGVETYVGGEVRHNDVDTGKETFITVALKTDGTLSNEIPKICIFSALLGGGQSFSVGGPGKGMTSRLYKEMVVRTPGCSSSASLAHIHSTSGLFGITASCDYDNARAVSKALLKQIRDIAEAKLLTYEEMERARNAAMSQFLTSASNREIMAEDYARQLLYFGKIYGIEEMKKQLKAVTKEDMINAAKRWLSSKPSVAVRGNVLDVPSYRDIEKELQTQFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW4</accession>
    <name>A0ABV2AFW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000156</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000020">
        <property type="protein sequence ID" value="MES1918142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39290">
        <property type="entry name" value="C3H1-TYPE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39290:SF6">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="336" mass="39410" checksum="B24D865AAE115EEE" modified="2025-10-08" version="1">MNSKLIVKSAEGHLKSFFQPFSRPENVSNLFVLSCQRACYDRPHRWPWYYTRYNPHFKSFQNEDPFELAKYFVHICNLLNEPVTHKFCSEMENSLNRKLRGHILSNDVIHKTWQEKLLGYSSKRKRYLKNPYLDMVEFLSGTMRVQHPFLFVRDAASQIFGKAIPSDAAIQQIAKIAPKIVECGYATSGYWSYMLKQVGCDVKCLTVGKPYLQKSVEWDPIKPIVDVRPGDFFEQTNCDDYALLFVWPHDPAVSQNLYWDETSYLAKQKNFEELENWRGDTVITVSQSQNDIVFDAGLKYFPSAREEDNWKIVETIDIPQWIGANDKIRIFRRTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP5</accession>
    <name>A0ABV2AGP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Rrp42p</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rrp42</name>
        <name evidence="7" type="ORF">MHBO_000751</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RNase PH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000140">
        <property type="protein sequence ID" value="MES1918855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="entry name" value="GHMP Kinase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015847">
        <property type="entry name" value="ExoRNase_PH_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036345">
        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050590">
        <property type="entry name" value="Exosome_comp_Rrp42_subfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11097:SF14">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT RRP45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11097">
        <property type="entry name" value="EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03725">
        <property type="entry name" value="RNase_PH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="Ribonuclease PH domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="5">
        <location>
            <begin position="38"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="6">
        <location>
            <begin position="186"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="253" mass="28629" checksum="33D44A4D07D2AAB4" modified="2025-10-08" version="1">MAVYKSKNVLELIRNTAKENMRLDGRTNLEHRQIKHEKIANGIITTSFGKTKCVVSIKESLKNPFPDKPNEGIINFSSSFNLSEFSQKMLKETELNSILDNIFKKNNLIDAESLCVMSGRKVWALKINADIFADDGNSASCAVHAVSLALNDFLLPFTFIQNDQISIIKEKSTKLKVNGHVFMQKMAYFENRFVLDPSLAEEFASNAFCSAAFSKDGKICYLLKKGVLPIPIEKLFDSLKQIFEHFKQLNLHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH00</accession>
    <name>A0ABV2AH00_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000162">
        <property type="protein sequence ID" value="MES1918945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10858" checksum="0E95B9E2D264A7E6" modified="2025-10-08" version="1">MIEKYIVSNDQERLQSVLNHFFTVREEVSDKVVNLMKNHITEKNLKILKYILLDIVNNEQIVEAINNNSNLNDLKVFCVKIELSERSEYCTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH45</accession>
    <name>A0ABV2AH45_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Pre-mRNA-splicing factor SPF27</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000871</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SPF27 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000173">
        <property type="protein sequence ID" value="MES1918991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008409">
        <property type="entry name" value="SPF27"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13296">
        <property type="entry name" value="BCAS2 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13296:SF0">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR SPF27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05700">
        <property type="entry name" value="BCAS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="106"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="216" mass="25657" checksum="78F4C2DF15AEB45E" modified="2025-10-08" version="1">MSSIESSDDMKLREDAKLVNNLAYIDDEIDAATKEKINELIIKEMSDMPKNNYKTKSFYFDENVFLNKNKKTLFLNSEMKRIEKRQKLNGINDKIYQNKPPTGNSLKQWKNSLNNLGARIEEIEKQFEHLELLKKFGPNLWKNHAEKMEMELDSLKSHEKNVDFEISKINRKRKTEQESAQTALSSLSERWWKLVRKNNEIETACKVLEMRIKRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH52</accession>
    <name>A0ABV2AH52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chromatin assembly factor 1 subunit B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">CHAF1B</name>
        <name evidence="11" type="ORF">MHBO_000688</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the WD repeat HIR1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000123">
        <property type="protein sequence ID" value="MES1918779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055410">
        <property type="entry name" value="Beta-prop_CAF1B_HIR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045145">
        <property type="entry name" value="PTHR15271"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15271">
        <property type="entry name" value="CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15271:SF4">
        <property type="entry name" value="CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24105">
        <property type="entry name" value="Beta-prop_CAF1B_HIR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 9" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="CAF1B/HIR1 beta-propeller" evidence="10">
        <location>
            <begin position="4"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="9">
        <location>
            <begin position="12"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="9">
        <location>
            <begin position="56"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF24105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="329" mass="37643" checksum="8A71A52CBECC550E" modified="2025-10-08" version="1">MADNNLSFLSSLNAHDGGVNIIRFSPDSRYLASAGDDKIVALWHKTDEKWTLHHKLKAHVAEIYSLSWSSNSKFLFSGSLLSELVLWDIDSREPIQRLELRSRFLQGLAVDPLGLFVVALSNDGSLRFFVRKAKRRACEKPKFKKFKVLEKFEGERLFAKEVENGFYRKLEWSPEGEFLATSSGRFDKNDKHSAAIFCRDNLMAPRFLLSGFVSVTNCARWSPVWHVPDQKNERKRTFELSENGQKIESDKRRMLAISSMTEMVLFSCWESACEQISRVERLHYAPITDLAWSKDGRKLMVSSMDGYCSVLDVDFESLGICILGDGDME</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH72</accession>
    <name>A0ABV2AH72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribosomal 40S subunit protein S1B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPS1</name>
        <name evidence="4" type="ORF">MHBO_000658</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000117">
        <property type="protein sequence ID" value="MES1918743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001593">
        <property type="entry name" value="Ribosomal_eS1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11830">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S3A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01015">
        <property type="entry name" value="Ribosomal_S3Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01397">
        <property type="entry name" value="Ribosomal_S3Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19484" checksum="C89DDC5955CC7EA0" modified="2025-10-08" version="1">MAIGKNKKIGKKQNKKKIIDPFSKKNWFDIKAPSNFEIRDIGKTPVTKYSTPKEINDSLVGRSIWVSLGDLKDTHKDAFRKFCFRVQSVIGNKCLTTFNGMDITTDKLKSIVKKWTTLIEANVDVKTTDGFLLRFFAIGFTRRAKNQIKKTSYAKRSQVSFRPFLQLWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ8</accession>
    <name>A0ABV2AHJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">RNA-binding protein 28</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RBM28</name>
        <name evidence="7" type="ORF">MHBO_001037</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000216">
        <property type="protein sequence ID" value="MES1919173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003954">
        <property type="entry name" value="RRM_euk-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051945">
        <property type="entry name" value="RRM_MRD1_RNA_proc_ribogen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48039">
        <property type="entry name" value="RNA-BINDING MOTIF PROTEIN 14B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48039:SF5">
        <property type="entry name" value="RNA-BINDING PROTEIN 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00361">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="6">
        <location>
            <begin position="4"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="6">
        <location>
            <begin position="180"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="6">
        <location>
            <begin position="324"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="362" mass="42394" checksum="8EA49C0BF4E7E4D5" modified="2025-10-08" version="1" fragment="single">MSPQTLFIKNIPPFFTDVDLKALIEKASKTKAVFIARNKKTQESRSFGYAKFPDEIELKKAESYLKNRQIENYQLNVEMANKRKNKNEKTKKVQISKYLLIKGIPANIDQKQFFKTVKKLNKIEHVIFPAPESTFGDFSARLIFKSEEFAKTAKLKIPKIFSNIKMNLSIYFLGKNEKLSRLIVRNAPFQINEKDFEKIFGQFGKIKEMKMPKDEKNNAKGYLFIEYENIESAAKAIDSLNGLKIIDRKIVVDWAISKLHYERIQQKREKISQKIIQKNKKFDQIKIDPEKKLIEKENLIKEDEELMKKNLVKKSKFGDVSEKRTIFISNLSTEITKKELFEAFKKIGRINYIKIVIDSVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ6</accession>
    <name>A0ABV2AHQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">WD repeat and FYVE domain-containing protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">WDFY3</name>
        <name evidence="3" type="ORF">MHBO_001080</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000229">
        <property type="protein sequence ID" value="MES1919219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06071">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1540.10">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000409">
        <property type="entry name" value="BEACH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036372">
        <property type="entry name" value="BEACH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050865">
        <property type="entry name" value="BEACH_Domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023362">
        <property type="entry name" value="PH-BEACH_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743:SF112">
        <property type="entry name" value="BEACH DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743">
        <property type="entry name" value="BEIGE/BEACH-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02138">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01026">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81837">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50197">
        <property type="entry name" value="BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51783">
        <property type="entry name" value="PH_BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BEACH-type PH" evidence="2">
        <location>
            <begin position="620"/>
            <end position="755"/>
        </location>
    </feature>
    <feature type="domain" description="BEACH" evidence="1">
        <location>
            <begin position="764"/>
            <end position="1055"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1159" mass="135550" checksum="CA4E14CEB272E790" modified="2025-10-08" version="1" fragment="single">MIKLIDKNFSDILKFFELAKHVECADPIIRIFCQILKNSPMLKRSQNIKNILCRELFANLEEQRIDKQIYTLIFGIAMGNYFDKLDYKNSISGNNTIKNSIAMSFLLKNIKNMSYKMKLDFCLDLNILFQNKSNITKFAQINMWETHFMMFWMKTNNKIYNTHSEIQVMKALAIENCTTVLLHQMESNEDSAMPLFNLIVCTRKAIFIKENEKRDNIKRAKIRVKILDDLFSKIFTILELHSFKFDEANLVPETYKNIQKFKNLEGILDFAEYILIRIEDLIVHFNTDTILSIISMLKKIIYLNVRLGLLKNSKERLYRIIMTVVKLNLEDDSYSIFLLDIIRIVTKIFKMGCEYQEEKMSIYFIAKQLFLQTRIIENPKIKLVFTERMVKMVKFYSPKYLFGLTHDLNKINFDVVEKMFGLGNPKISDEHAMTISHKFLKTSKMNVDKMYSHLDLLQKFNRKESNKNVINFLEFLGKPNNQKKAKRSQKVKLEKSKIISDSKIRRKIIYFMKNYLKSRQAHCNTNDCNNGQGVFALDIIVSEKNTRTVTKYSPFATITKSKMIKHSLDSPFTPIKLQIPVPKTADTFYPISDDNQKEWKENAENRKILDYINWVTPKIRKFGKIEKWLPCKLVIASSQMYGIVCLSDTHFGFFGGTKKTAFLNLSLNDDDNGMEDLMEEEMDEIGIDIDLLDKEKMVESEIWNCCFRYWKILQIFPRKIFLEGHALELFVASHGSFIVVLKDKTSKDELLKSLSVKTNLHIETDPVKRFFYSGSVKEWQTGAISNFEFLLRLNTFSGRTFNDVTQYPVFPWIIRDYKSESINLSSAETFRDLSKPMGALNADSAKETKKRFEEIAKDNKQMPPFHYGTMYSSAAIVLEFLMRLEPYTEMYTNFHDGNFDLPDRIFFSIESSWNLAATSISDVRELIPEFFNFPEIFKNVNGLNFGNRQDGSVVNDVILPPWAKSAEEFVSINRAALESDFVSNQLHKWVDLIFGYKQMGSEAEKAQNVFHHLMYHKNENFENIKDENLKEATKTQISNFGQVPIQILKTPCPKKMIHSEFANSPTRIIFERNTFHIGNIDDLKESLKLDRLVLMLLSSCFVKNTISKFPKLFYNEEFDDLINNENFTRKSNFSEDNFFRNSNIWDKAKIATAIIYDKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI23</accession>
    <name>A0ABV2AI23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001181</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000258">
        <property type="protein sequence ID" value="MES1919331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047379175" evidence="2">
        <location>
            <begin position="23"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="19214" checksum="2DCF6F5E1A003CAF" modified="2025-10-08" version="1">MIIFKMMKYFLCFANMSILAIAHKNTCELPEKTGLLIHNVTDVSDKYLTFEISCKSLLKLYFKNKKQPLKVKVKFFCDRVYKKVDDLNSIDFYVCKLNYFAIFISFFMIVVVIIIIIGALDKCSCSKCFQRRKNIIEPQNIHRRLSTISEESGQIENETRVLLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA7</accession>
    <name>A0ABV2AIA7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001034</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000215">
        <property type="protein sequence ID" value="MES1919169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046789261" description="Secreted protein" evidence="1">
        <location>
            <begin position="20"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="78" mass="9311" checksum="08267771B2603CA9" modified="2025-10-08" version="1">MEFVLFFVWLRLCFDLAKNLGHLDCPDFHVEGYKPLYYQHDETEDRYLCAVICDEEKGYFPSGHNLHNFLICSFSQLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ35</accession>
    <name>A0ABV2AJ35_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">dolichol kinase</fullName>
            <ecNumber evidence="3">2.7.1.108</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001482</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the polyprenol kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.108" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000369">
        <property type="protein sequence ID" value="MES1919698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032974">
        <property type="entry name" value="Polypren_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13205:SF15">
        <property type="entry name" value="DOLICHOL KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13205">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 15-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="158"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="243"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="338"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="374"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="428"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="445" mass="50469" checksum="0F258D3F235D59E3" modified="2025-10-08" version="1">MFLLCSLSLNIFLLQKAKFAGKNDILSFFHFISGYFMLASTIATSIGYLTNAQNTPKKALFSLLSFSSTFSLHFVTSFPISRNLTEICFCFAVSVNIFLTDFIVTKINSLSAKSFLNGEDFIFAALSSLFFLFPIFLIIFHFFGYQLYNSVLASRNDLAVFESTVFLMHFVRFYILPKNKFAPKDVLVFAPFILWASTAIYSQKRLFLLTFWSILFLSMIKMAPQNRKAAPNSKKNFLKRKYFHFFVILFIAPALFADAIFLAFALYCAILSFVILEYIRRNHDFAFVAKVDSFYKRYKDDRDHDNIYLSHIYLLTGVSLPVFLQILHFGVPKTAFDFISALSGLTALGVLDAFAAISGILLKGKMRFENGKTVEGMLGGFLSALIFEILVYSALNSGLPDFSVLGKMVFPIISCSVFEAMSVQFDNLYIPIVLYSLNILFLVND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ61</accession>
    <name>A0ABV2AJ61_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001489</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000372">
        <property type="protein sequence ID" value="MES1919706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="77"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="182"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="430"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="495"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="641"/>
            <end position="766"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="796" mass="92922" checksum="1F1CAD8C12955CFF" modified="2025-10-08" version="1">MEKKKSSVGILSTEEIENLKTMTPIALSKSSTILTENSFEKKIIFGNTPKKNFENLNEKSFQTPKRISIKRKIFDKSPKSAKTNIKTPKSDIKTNSKKSVRAFQTPKNRKSPSIRLLSPIHNFKKSPLEESNSSIRRSLNPVIHKKKLESDSIEEGFQDLGEKLHFLARHNRQAHSKYRTDIDLLNKQLEDKSKAIEEIKSRQEFALAQRDELEKKVDALKQEKENKETALSEKIKQMKEEQASLQRRYLKTARSDYDGMNELNKKLLRKSRLLNKTESRLIEANRDLMNLIKNLSGKISNVEHSINKEERDLKVLERTKSHLATRKNDLTLEFDKMEKYLDQAEEEGKSREPNIDDNNALRNETETISVYHKGLKMVTDLLGVKSDRHKQTISEIENSFYKIAEALSENAHDRYRRQSFGYQFLPNRHVKATREMLKSLKTLKNDLRQNQKELENKNKLIEKQKQFIKETFEHNKINKNDISAKNENSSLKKKIKVYEEKSLIQQKENEKMKNQIFLLKEKITELNDKNKKEMLTAKQKEGNLRELEKSKIIKDLSEKSKKDTEKIISLEKDLNQLKGELGKIEKGFEDKDKIVISLKDKILHLQDQLSKQQSETEKEKKFLLKSKKEAIFNTEKTFGENQILTDNIKKLTEQLSKANFNLQKMEKNVKIFEAKSKILHKKIQKSQSEKNELKIKIDLLSGKVSKMELQRKEILAKKDKLENLCKKGQVQLQGAEIVAQQRLSKLEEYEKEIASCHLKIKSQSKKIDFFSKYKLKGTNKSITKELNEILGEKKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ0</accession>
    <name>A0ABV2AJJ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001590</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000414">
        <property type="protein sequence ID" value="MES1919830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045269">
        <property type="entry name" value="Atg1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24348:SF22">
        <property type="entry name" value="NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24348">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="5">
        <location>
            <begin position="20"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="306" mass="35329" checksum="41664BA560E0363D" modified="2025-10-08" version="1">MEIYNLVESKTCWGHYYNEYKLVKKISRGSTTKVYLATKNSKKFALKVYPQYEVDKVVNIRLEENSKGQKQMKHVRKRDKIVNEAKIISSLKHKNIVSLHEILKSNDEMILVLDYCGENHLMNWNKIDRKFSVSAAAKRLFDSNGSTFTEKGVFQIAKCLSEIIKYLRDKNVAHRDIKPENILINNDNEDISLIDFSISESFENISPIFSSNNAGTPNFMAPETGKPEYCPFKAEVWSFGVLLFVLRFGFAPFDAEKRNDVFNNINNKPIAFAEEDVSDKFRALLEKMLCKEPLERISIDGIIKFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR4</accession>
    <name>A0ABV2AJR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000440">
        <property type="protein sequence ID" value="MES1919910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19121" checksum="80A13AAB7AF9FDDF" modified="2025-10-08" version="1">MIHLLRKYLKSTKTDFNSNGLEDLKFVSLKSLTNTLSDIKKKKKIDISFPLMALSVGFDLIDWEPSKFNKSIFKHSLGSNINPSAKDNDEKGKVMNVSDYLNNVTKPLTIRKETGGFNIITKDDGFNTKKIIVTQNDPDNKNLYRNFFAKNWYSFMLIMIIIVLFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJW8</accession>
    <name>A0ABV2AJW8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001704</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000462">
        <property type="protein sequence ID" value="MES1919963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050079">
        <property type="entry name" value="DEAD_box_RNA_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959:SF1">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE RHLE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="5">
        <location>
            <begin position="146"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="294" mass="33749" checksum="263F09C4F3765A01" modified="2025-10-08" version="1">MAITGGPGLAEQMKELTRRRPSFIVGTATRLWEILNSKHRVIDNEKTVCVVFDEFDQALRSLLVKKRTKIQKPSIMIAKMFASQENTQLIGCSATYDQKTVDKVAQIGFKNNNLRTFAINKDKVLPHVLHQFAVGYHLDFERRLDLFLSLYRKLTPRSVLLIVPDQNFESRKLIDRLNQQSLRTVFLNESTLSGDRKAATERFEEEEIKIAVTTEYFLRGIDLDFVSHVFAWSASDRADLATVYQHLSGRAGRPSRELPFLLSPGKCITLVDFEEIPLLEKIEKKLGFKFSRLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ8</accession>
    <name>A0ABV2AJZ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001726</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000471">
        <property type="protein sequence ID" value="MES1919993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1082">
        <property type="entry name" value="COLLAGEN TRIPLE HELIX REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="212"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="99"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="213"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="231"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="240" mass="24149" checksum="D6A74A41EFF8A5FD" modified="2025-10-08" version="1">MPHHVQFIPGPPGPPGNPGRPGCPGKPGKDGFPGYAGKQGIPGKHGCPGKPGARGFPGMFGRPGCPGAMGHRGEPGIPGKPGCMGLRGLPGIPGKSIRGPPGHMGPQGQMGHVGRSGPPGQPGVGKKGEKGETGPGGIMGIPGCPGKVGPQGLPGAPGRIGRPGIPGKPGCPGVPGNPAVFPTPTYQNVSENEEYMPYPPANEDYSHEYVLYNLQPPSNEPQNPENTPACEDNDGDSASY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK57</accession>
    <name>A0ABV2AK57_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001610</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000422">
        <property type="protein sequence ID" value="MES1919854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042163">
        <property type="entry name" value="PHF12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46309:SF5">
        <property type="entry name" value="GNAT FAMILY ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46309">
        <property type="entry name" value="PHD FINGER PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="5">
        <location>
            <begin position="278"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="812" mass="95258" checksum="7DE248D0AE69F531" modified="2025-10-08" version="1">MALETFDVVWARRNRFGSYFPALEIPSSKVPQIWKIVKNAFSFCRNAQIDPMQTLIQCSSCSWILGHDRFFHCNKHKNFFCFRCFRLMKRSIIPVAPKLPNMSKNNQNKKQVHDPLRRSSISRTIRKDLIDLPVSNEHIKFFSKLVNPFSENIQGESKYKNIGSFAKYLQTQKIFERSDDDEPGFIKEETKLVFWLDGTSSFSFVPTDKILDFMDNFQTFGNKQKQPLLDETSFRLLRKSVGHAMSLLGKSDIRCNVLVGDQTPKTENTSVNYEDCYDNTCLRCGEVGDLICCDGCTRVFHLSCAKMFKVPDGVWLCDYCELNSLDRNVTFDLEEDLLTAKETLNLAKTRTSDDEVKTENKHKYELRSAEKKSGNLVKSLLDKKLTKSQKFDGPANWMKTTIRYSFLPETNFVRSNQKGAFSITKNDGLMVDEIGFGFSFKISESNLFSENKTEKNEKKLIQNMDKFAIELLNPKSAINYFLNQNFKREFGYLLQVPIEWRFPEIDPKTGKGGYVDSYEALGFYRKATFTEKSDRHIWFIDKVPLLKTQNFLQHQKTLLEKNKEFQNFFQIGKNEKIGKNKFKRAKNKYIWKRDRSNNDSLDQKKFENKKFTKSRFKSIPKKRIKKQMLSKKLSDIEKDNLLYETVLTAYSKEKYGNSMKLRSIEAKENEILKKLKEAKLQINIKSVENCENLKQIYFYKNKIKQLKKEILKIDNNHQINKIMENLSEELKTKSSTFQKNRKQEKWLKETELCQEHKQKLKEQNKMNNKRLCRIGEKVGTKICNGTAFVAVSWRDNDFCKEEVSWEHFDCCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN6</accession>
    <name>A0ABV2AKN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000460">
        <property type="protein sequence ID" value="MES1919958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11302" checksum="1A584AB77F85B67D" modified="2025-10-08" version="1">MLQSIDPSNSIGANKSFNSFCGTLQPHPLSLLKEVRLKFAGRLCSFAENRGSAILAIMIAKSVFRRCVYIGICLLCLDNKKKNDNLSLKRQINALFLPFRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKU7</accession>
    <name>A0ABV2AKU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2 DOCK-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001982</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DOCK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000594">
        <property type="protein sequence ID" value="MES1920298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027007">
        <property type="entry name" value="C2_DOCK-type_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026791">
        <property type="entry name" value="DOCK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23317">
        <property type="entry name" value="DEDICATOR OF CYTOKINESIS DOCK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23317:SF76">
        <property type="entry name" value="LD20667P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14429">
        <property type="entry name" value="DOCK-C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51650">
        <property type="entry name" value="C2_DOCK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2 DOCK-type" evidence="3">
        <location>
            <begin position="1"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="555"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="577"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="577" mass="67919" checksum="E002849696E43494" modified="2025-10-08" version="1" fragment="single">MNEKTHLLFRMFEVKKKSKNNLKELIGFAFLRLVNKEENTINFIGDGIYELTFFNEKLTKDYLNKTKTKPKFDMFSMHSSKNTMSVRIKLQSSILSNDKNLNALFSENNNFSLNDRLKNVRKMKHSNLVRFLAPLLKLHISYLANSEKRTKVTGLKFVTQMLKKLGENNSNLKYNDEELRKIWIYFYFKNFDDEPYYFHIISAGNYLFEINRKIDVEATSMSNLSRFSNVDKIDEATLLFLETLCFWFDCTLKSLQLEYNENKQIRKKEIFLSEFKLFVNNLFEEFIKYSSASTIALFKTIVKKVVQFTIGCYAMFSIDEIFDIVKMSVEKLSSEDEINIIELKKEFLFHFYDNDFFPQIILSEQNFANIDQIEQIYPLNALLINHCIANLLQKPPHYYFISVLTALFTKHDFDNRLVGNHENMAKVANSYLPLVFKLCSQPMQFEKNNSAERDVLVCFLWVLKNCDRKLLKEWWSKSDNSVVANFLAVLKESLYKFRYIGKDRENSDFKSFLSQETTKNFNVGKKEGESEIKSNLESMVNTKYSSVENIDDEKSKNGKELIRKNHSSPKNKILNPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX4</accession>
    <name>A0ABV2AKX4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001671</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000446">
        <property type="protein sequence ID" value="MES1919927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="130" mass="15350" checksum="FA771E035AC6C2FD" modified="2025-10-08" version="1">MGYFQEKTSHSQVVLTWIYTEAKKRGLVGDNLFNGSFWGLNLLGMTCEMAEVSLTSSLYSFFENFQEKGELKQLEVISGNGVLRHMCENYLQKRDIRYHLTNEENRKILVSEKDLRKLFKRVKKRRFCLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY5</accession>
    <name>A0ABV2AKY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Diphthine--ammonia ligase</fullName>
            <ecNumber evidence="1">6.3.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Diphthamide synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Diphthamide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002003</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>diphthine-[translation elongation factor 2] + NH4(+) + ATP = diphthamide-[translation elongation factor 2] + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19753"/>
            <dbReference type="Rhea" id="RHEA-COMP:10172"/>
            <dbReference type="Rhea" id="RHEA-COMP:10174"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16692"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:82696"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.1.14"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.14" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000609">
        <property type="protein sequence ID" value="MES1920320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01994">
        <property type="entry name" value="AANH_PF0828-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1490.10">
        <property type="entry name" value="putative n-type atp pyrophosphatase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002761">
        <property type="entry name" value="Diphthami_syn_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030662">
        <property type="entry name" value="DPH6/MJ0570"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00290">
        <property type="entry name" value="MJ0570_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12196:SF2">
        <property type="entry name" value="DIPHTHINE--AMMONIA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12196">
        <property type="entry name" value="DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01902">
        <property type="entry name" value="Diphthami_syn_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Diphthamide synthase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00031552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="29306" checksum="8BC2E9B590DB66FE" modified="2025-10-08" version="1">MKFAALLSGGKDSILGAILSIKGGNELVAIANLYPREDADEIDSYMYQTVGHRLINSVGEAIGVPLYKRKIRGEMILSTLDYSFKEGDEVEDLFELVKKIKFDIPDLAAISTGAVFSKYQASRVDNICERLNLKHLKFLWRMEPSKLLLSLKENNVEAIIVKTASSDLNPNEFLGVDVVQNIPKLDLIKSKISRIGEGGEYETITLNCPIFKKEIKVNFVKKGNLEDKICPTGYLKFTKFDLIKKNEKFTENNDFKIIEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL03</accession>
    <name>A0ABV2AL03_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000602">
        <property type="protein sequence ID" value="MES1920307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25196" checksum="4222B2CF512FAB2A" modified="2025-10-08" version="1">MYGLNEQQTENSFCCPIIDIIGFTLDAVFGFIGLIFKSLFDLLEQIEILDNAIDQIKEITSFIATSFPKIVLLIGSVTASSFIISMSFVASFSRYIPRPITLGTSTLFASFGVILLIVVPELIVSTLAFVPFFDFFINLLEGYNYAMLSYLFVGISIVTLAVDTVAEPISPNKPYLFETMVNEVEKDHVDPIHMNEYINRGTEYIASRILSSESNDLNDYYKMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF5</accession>
    <name>A0ABV2ALF5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PNPLA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002130</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000685">
        <property type="protein sequence ID" value="MES1920465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1090.10">
        <property type="entry name" value="Cytosolic phospholipase A2 catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="FabD/lysophospholipase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="61"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="2">
        <location>
            <begin position="65"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10613" checksum="9276E1FDD6B54C06" modified="2025-10-08" version="1">MQFKLVTNSETIGILKLSAKISSVLLYQKSLKLFFTRNGEKIASSFVNMKKIKIKKPICILSLDGGGVRGLVSIQILKELENKLKEKGNLLQNFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ8</accession>
    <name>A0ABV2ALJ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002188</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000719">
        <property type="protein sequence ID" value="MES1920524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="276"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="348" mass="40079" checksum="0E55F09FFE0BF82D" modified="2025-10-08" version="1">MSQVCYRRQFAYAPYGIKLDSEKRVSEIAKGSQAEALKIKIGWKFIRKSETRKHLLTFSETVPRFEPFLLYHIRTDLCFALYADLLNYKGEPSRIDTLKKELSIKFPGGPFMTEITLLDPSKNVLSDGTKLCDLKKITGFNPPRTFFEFSETFENLLNEDLKEIARSAFQNHDEFVKNSAFLKNEAIFREKTSDLENEFAIPEYFLEQKNCFASENSRNFDGESGENRGNNGSINVQNERNGVVANREIEIDLFPGAEMLRIFVIAVLLFDMEDLYGNANLFLALFCLLAYLFYSKLALWATDRYFPFLLDRFDRLNGQFGESSFADSGRRRIQTNILNRLGAFGALI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK7</accession>
    <name>A0ABV2ALK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002213</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000731">
        <property type="protein sequence ID" value="MES1920552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.120">
        <property type="entry name" value="Protein prenylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002088">
        <property type="entry name" value="Prenyl_trans_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01239">
        <property type="entry name" value="PPTA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48439">
        <property type="entry name" value="Protein prenylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51147">
        <property type="entry name" value="PFTA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17990" checksum="9B744DBE4F866873" modified="2025-10-08" version="1">MMLKLDPRNNSAWNHRFYSLKNSKNLTIKDIESELNFSFENISAVPDNESVWNYFYGILEDNITVIKENKDLAEKAKNIILEIIKTCNKFQTEFINKNNEIEDESETKRSIRYILSFLTEIFALNFNFISKNETETVLIFIKFSLFYIFRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALP6</accession>
    <name>A0ABV2ALP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">mRNA turnover 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">MRTO4</name>
        <name evidence="3" type="ORF">MHBO_002249</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000756">
        <property type="protein sequence ID" value="MES1920595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.105.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001790">
        <property type="entry name" value="Ribosomal_uL10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040637">
        <property type="entry name" value="Ribosomal_uL10-like_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043164">
        <property type="entry name" value="Ribosomal_uL10-like_insert_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043141">
        <property type="entry name" value="Ribosomal_uL10-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051742">
        <property type="entry name" value="Ribosome_Assembly_uL10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45841:SF1">
        <property type="entry name" value="MRNA TURNOVER PROTEIN 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45841">
        <property type="entry name" value="MRNA TURNOVER PROTEIN 4 MRTO4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00466">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17777">
        <property type="entry name" value="RL10P_insert"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL10-like insertion" evidence="2">
        <location>
            <begin position="79"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="20018" checksum="5FE97989FABD377F" modified="2025-10-08" version="1" fragment="single">NKRNVYFNKIKNDWTDSKFFSGKNRLIQFALGKTTKREKRKNLHKFGKTIKNECVLLMTNKSVEEVKKYFNFVRDAEYAKSGTISTKTVELKSGLLENMPFSMETRLKELKLPIKLDNRQIFLLGDVTVCSKGEMLTSNQCAVLKAFDFKISAFSCKVYSYWDNEKFYLEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR4</accession>
    <name>A0ABV2ALR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002221</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000737">
        <property type="protein sequence ID" value="MES1920562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="26168" checksum="C33585F972B3D95E" modified="2025-10-08" version="1">MFRPSKLREKAKIEEKSLLEVQLFSMELVNFLYSKCKNWAEKSVESELLSILVKNESISDILDRIKTVFAEKFVKLDDLIKMNAEKCAADLVKSFGRTQFINELVATQRENGGNFETILKKSYKQIKEKPTREWTVHDDKKLILRLYEEGVDNYRFVSKNTRFGMEQTEIDENKRNLAKLGVIRKEIESTKDGVVSTLKLENRFDAIFNFWSGCAVRKSEMEDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS9</accession>
    <name>A0ABV2ALS9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002234</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000745">
        <property type="protein sequence ID" value="MES1920577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010714">
        <property type="entry name" value="Coatomer_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056176">
        <property type="entry name" value="TPR_COPA_B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06957">
        <property type="entry name" value="COPI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23953">
        <property type="entry name" value="TPR_COPA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="COPA/B TPR" evidence="3">
        <location>
            <begin position="25"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="Coatomer alpha subunit C-terminal" evidence="2">
        <location>
            <begin position="290"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="284"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="297"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="458" mass="52857" checksum="371A795E3B763951" modified="2025-10-08" version="1">MDYSRNFYMFPLNRSEYEFKKAVELDNIEEVKKILDFSKFSGQKMVDFLLQKKYSKAALRFGRDENVQFGLALDCGDLDFAMKCAQKINDKSVWLKLGERAVELGFFDIAEKALILSENFFKLSFLYLVGDQKEKMEKLLQFAEKTENKALFLQISLFLNSENSLIKLLNNSGFSALAYAAIKAYNLNGEKFDIKIPAEVRNRIDRIRFGEGIKNCFSDKNGDLDKWPSKNKTVKNVNSEMEKILKSIETKTENLAKNEKMVENEFNDFQDWMAGLEKLEQAAEKVQRKEQSKLPAENQNSVNKNSQNLDKKLPKIGKKECLEFGQKWMENSPSAIDLISAQRFDLATERLYRKFGVVDPKPLQNLFLEIAQSTSMKMCLLPDFAPIRVGVSTRKKSFLKPLHGFNVEKVEREFDLALKKVTARKLEEAMADFKRILLILCVVEMSCDAEINVFFVDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU5</accession>
    <name>A0ABV2ALU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Alanine transaminase</fullName>
            <ecNumber evidence="8">2.6.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ALT1</name>
        <name evidence="8" type="ORF">MHBO_002309</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. Alanine aminotransferase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.2" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000789">
        <property type="protein sequence ID" value="MES1920658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004021">
        <property type="term" value="F:L-alanine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045088">
        <property type="entry name" value="ALAT1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11751">
        <property type="entry name" value="ALANINE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11751:SF29">
        <property type="entry name" value="ALANINE TRANSAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="7">
        <location>
            <begin position="4"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9154" checksum="D116E0741A8707A0" modified="2025-10-08" version="1" fragment="single">MSIGAYTHSQGLPSVRNSVANYLTNRDNFKSNPENIFLSNGATQVIKMALQLLISSENDGIMVPIPQYPLYSASIQMFGGNFIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY7</accession>
    <name>A0ABV2ALY7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">B3/B4 tRNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002332</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000806">
        <property type="protein sequence ID" value="MES1920686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.56.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.40.10">
        <property type="entry name" value="Phenylalanyl-trna Synthetase, Chain B, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005146">
        <property type="entry name" value="B3/B4_tRNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045060">
        <property type="entry name" value="Phe-tRNA-ligase_IIc_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020825">
        <property type="entry name" value="Phe-tRNA_synthase-like_B3/B4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040659">
        <property type="entry name" value="PhetRS_B1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10947:SF0">
        <property type="entry name" value="PHENYLALANINE--TRNA LIGASE BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10947">
        <property type="entry name" value="PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18262">
        <property type="entry name" value="PhetRS_B1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00873">
        <property type="entry name" value="B3_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="Putative DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B3/B4 tRNA-binding" evidence="1">
        <location>
            <begin position="114"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="29950" checksum="081356ED8353F327" modified="2025-10-08" version="1">MPVIAVKKEVLYEKIGLDENFSVEQFQDLCFDFGIELDNVVTEKELKSGGDKTESDVIYYKIEVPANRYDLLCVEGLAYSLAVFMGKKEILTVNLESSKENDFYVKIEKSVEKIRPYIVSAVIKNVELNDESFKSLIELQEKLHFNICRDRTLASIGVHNFDALKMPITYKALRNDSKSFVALNETESFTVEQLFNVYRKRSVCSVRPYLSILEGFDESPFVLDANDNVCSLPPIINSELTKVSENTKNMLKFRNAFANCKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM38</accession>
    <name>A0ABV2AM38_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002118</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000678">
        <property type="protein sequence ID" value="MES1920453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="140" mass="16245" checksum="82130D26A3F46681" modified="2025-10-08" version="1">METKDLLPKTTRFMLLLPAIIFCFLLLLCSILSAFFAFFTRLHYLLILAPFFILFFGMLSIPSQIVSIFKMIPFLKIKVTYGNGYYCGQVVLMLMLTTIVCTLVDHFMPPVYPMPLDDRFSEVAAEMYEKEIRNPIKSDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM40</accession>
    <name>A0ABV2AM40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002387</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000841">
        <property type="protein sequence ID" value="MES1920747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="212"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="233"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="270"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="307" mass="36097" checksum="377CEF6B84762CC2" modified="2025-10-08" version="1">MVNFFFLSRDLQKCAMWHGDKHLHKMVTEYAQILSTSWHYSVHSKKCDLSPKCDCDLKKSIPKGVYKIAHRKHPTVLWCKSNIKHFRAILRLAKFLAAERRRRNDLFKLKGESPRYSPFHKSEETLLVLEENPPLLPDKQWEDPPLAMPDCYKALNLSSIDAYRLYYACHKVQVAKLEWYPADEPGWLGEYKKKITPEIQRSIDDALTEIKKKRKRREMLRNGGNEAISDTKKRQKSNKKKKAKKVKKNKLIENGQTKKNKLIKNEQTKKNKLIKNGQTKKNKLIKNGQNGKRRSMRLVIKKSLSKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM72</accession>
    <name>A0ABV2AM72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002256</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000757">
        <property type="protein sequence ID" value="MES1920604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15199" checksum="88AD4049AB7955F5" modified="2025-10-08" version="1">MIKRHHLCCNNNKKAGVPTRLPGQTFAGQTFPPDFDSDSDNPLSPVATCRPCPWEVDDAFNRLLTTPGLRYQRRESDRYKLSCNNFKIDDDECWPPKGIGPSFSNFDICSVTITEQKCSFCKKLFIVDMRENC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB8</accession>
    <name>A0ABV2AMB8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Chromatin-remodeling complex subunit ies6, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">IES6</name>
        <name evidence="6" type="ORF">MHBO_002443</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000877">
        <property type="protein sequence ID" value="MES1920809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029525">
        <property type="entry name" value="INO80C/Ies6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013272">
        <property type="entry name" value="Vps72/YL1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31200">
        <property type="entry name" value="INO80 COMPLEX SUBUNIT C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31200:SF1">
        <property type="entry name" value="INO80 COMPLEX SUBUNIT C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08265">
        <property type="entry name" value="YL1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00993">
        <property type="entry name" value="YL1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Vps72/YL1 C-terminal" evidence="5">
        <location>
            <begin position="148"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23593" checksum="BD9942F67DB94EC8" modified="2025-10-08" version="1" fragment="single">KMAKTKIDHKNSKIKNHFYNGKLAVLKNDKFKKIVFPDLNLTLSAPKDLFVNKEKGEKSKQNECVEDFSKIIRKAIKKYKLSNVSNCLKLQKKGCGDGLYRRYKKNRSNKEQPKKFNLEKFRKTFDESNDYFSENGIKSAKPIYPNKKYCDITGLPSKYTDPRTGLNFVSSRVYKSNMSKLQKEEIDNILNLRNGDVYYGYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ7</accession>
    <name>A0ABV2AMJ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GED domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002488</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000920">
        <property type="protein sequence ID" value="MES1920868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1240">
        <property type="entry name" value="Dynamin, middle domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003130">
        <property type="entry name" value="GED"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020850">
        <property type="entry name" value="GED_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02212">
        <property type="entry name" value="GED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51388">
        <property type="entry name" value="GED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GED" evidence="1">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15590" checksum="E02E1D258332259B" modified="2025-10-08" version="1">MAYFKISFMRFADNIPLVIDRLLLRNFANSVLEYLVQRLGLFERDEEDIRRFLEDSMETKRSRSNLKYKLATLTKALDEINTFYKQNELFKREKRDFGNKNLLKLNDLKKSELKTDETNDLKQFFKTFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM2</accession>
    <name>A0ABV2AMM2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">RPB1_3</name>
        <name evidence="8" type="ORF">MHBO_002530</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNA polymerase beta' chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000957">
        <property type="protein sequence ID" value="MES1920921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.860.120">
        <property type="entry name" value="RNA polymerase II, clamp domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045867">
        <property type="entry name" value="DNA-dir_RpoC_beta_prime"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007080">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044893">
        <property type="entry name" value="RNA_pol_Rpb1_clamp_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376:SF37">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04997">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="7">
        <location>
            <begin position="12"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="287" mass="31964" checksum="E001077F9302F2B4" modified="2025-10-08" version="1">MNTFELSSIKVRDITNIQFGILNPDEVRSMSVVEVKTATAYEKGGIPKENGLLDLRMGTTDEGFLCQSCQGNRTECPGHFGHVELARPMFHIGFLGVALKILRCVCFKCSRLLADPRTPQFAATQAVRGNKAKFEAMYDLSKAIGKCGGDANGCGYGQPVYRKATTHLNADFPEGYSSHKSVDRKRELSAQEVFDVFAKISDDDCHLIGLDPKFSRPEWFILTVLPVPPPPVRPAVRLDSVSFSLDDLTHKLADIVKFNNTLKRNRTGCRSTCFRRTRRSCNITLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS5</accession>
    <name>A0ABV2AMS5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">P-type ATPase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002574</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endomembrane system</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000988">
        <property type="protein sequence ID" value="MES1920972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032630">
        <property type="entry name" value="P_typ_ATPase_c"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF180">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE DNF1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16212">
        <property type="entry name" value="PhoLip_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="178"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase C-terminal" evidence="7">
        <location>
            <begin position="1"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="31212" checksum="8C994731A8D703FF" modified="2025-10-08" version="1">MAADFALSEFQMLQKLLLVHGSWSYRRATKLVLNYLHKNFVLSANYFLYTLQSGWSGTFFANSITMSLFNSVFTAYPLLFASVIDQCYSAKMAIREPILYRDGPNNKNLNFWLFLRIVLSAVLETVVITTTTCFFLGLSSSPFSNGQSVDSAIIEDANITIIFYMLTIRMAMETDTWIFINFTLFLVSIIVFNVWMFVYSIVTPEVKYKGNALRLFSMLEFWISLFFCVIICNGCELLFRYFCRYSKKTVVGYKIIQELEKVWKKVLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT1</accession>
    <name>A0ABV2AMT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Lipocalin/cytosolic fatty-acid binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002271</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the calycin superfamily. Lipocalin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000770">
        <property type="protein sequence ID" value="MES1920617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd19438">
        <property type="entry name" value="lipocalin_Blc-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012674">
        <property type="entry name" value="Calycin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022271">
        <property type="entry name" value="Lipocalin_ApoD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047202">
        <property type="entry name" value="Lipocalin_Blc-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022272">
        <property type="entry name" value="Lipocalin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000566">
        <property type="entry name" value="Lipocln_cytosolic_FA-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10612">
        <property type="entry name" value="APOLIPOPROTEIN D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10612:SF34">
        <property type="entry name" value="APOLIPOPROTEIN D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08212">
        <property type="entry name" value="Lipocalin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036893">
        <property type="entry name" value="Lipocalin_ApoD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50814">
        <property type="entry name" value="Lipocalins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00213">
        <property type="entry name" value="LIPOCALIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipocalin/cytosolic fatty-acid binding" evidence="3">
        <location>
            <begin position="14"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR036893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20546" checksum="F14E4EA7EE133797" modified="2025-10-08" version="1">MPAKISDLSTAKNVDLEKYQGQWYEIARIENYFEKRCGVGEMAPIAVYSLKQNNIFGVINSCRQVKNNKIKRVSGIAIVLDSPNNAIFHVNFVPIIKNFPSIIKFFVKTGNYWILKVIFRENNSYKYDLAYVCSPDRRCLWFLCRTSQVTEKEYDDFVEFSEKQKFDLTNLKRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV6</accession>
    <name>A0ABV2AMV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001004">
        <property type="protein sequence ID" value="MES1920995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="6301" checksum="D6FC0FD9A2922E3F" modified="2025-10-08" version="1">MQISSIVVKDDKGFEEESEEESVEEEGIEDSFYEKRKSYDYEKIFSESSEYSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX2</accession>
    <name>A0ABV2AMX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ACAP2</name>
        <name evidence="4" type="ORF">MHBO_002621</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001023">
        <property type="protein sequence ID" value="MES1921017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052589">
        <property type="entry name" value="Arf-GAP_dual-PH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46021:SF2">
        <property type="entry name" value="ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46021">
        <property type="entry name" value="ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00405">
        <property type="entry name" value="REVINTRACTNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00105">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50115">
        <property type="entry name" value="ARFGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50003">
        <property type="entry name" value="PH_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Arf-GAP" evidence="3">
        <location>
            <begin position="35"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="PH" evidence="2">
        <location>
            <begin position="295"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="407" mass="46958" checksum="8011079E54C312EE" modified="2025-10-08" version="1">MDPKKPLNIADKKRLEINSDSVTSYIRNTKMFGGQASIKAISEFPGNDICADCRRKENEWVSLKIGIFICIDCARIHKTLGKEFAEVQSIKHDAVIWDLEKIQFLEAAGNLMMNNIYEHRLPSYYLTPNELIDSPFVRKNFISVKYLEKLFLKTDRNLHENEINEKDHLVVEGCPFYKMPQNPLTFEGEYRSEKKQKGSKASMILINSILSVYKSEKDKNPKATIEIEKAKIDLTNRIVKGLQEYSIKVASKDKCHFFDMRETSGIIDIVHSMRRASAFYSTNPNQKLSNILPKNMMFEKAILENSAIKGMAKVSGSKKWIVLVDENLYFFKSQKNVSPNGCVLLRESLIKEHKQNSIMIVSPFQRVIVKLSDAEETTKWLFELKKVGETLNEQKLVDFKDLCEYEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR9</accession>
    <name>A0ABV2ANR9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002858</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001237">
        <property type="protein sequence ID" value="MES1921316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11716" checksum="F4B3EAACDEE83258" modified="2025-10-08" version="1" fragment="single">MNICNHLYKFIGPMLTIIASILIAVSVHFEYSENSTMEIFINKFCFKRINQCTVTDNCASIPFILLFVVCGCFIIANVENIIGSIKYKFRAATSSIISTLFFIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT7</accession>
    <name>A0ABV2ANT7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002877</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001260">
        <property type="protein sequence ID" value="MES1921340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12825" checksum="EEDAC5E65F2CFA17" modified="2025-10-08" version="1">MDNSFLVICLDRDKTHSLSPLYNSQKTPNSKQKEISEKIDYIGGNKTHSIKSNSNEYAERLCKLINLYYDKYEFEEKHLVLVHVLKFILVKSRKRNNLKNRKMAKNEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW7</accession>
    <name>A0ABV2ANW7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Pre-mRNA-processing factor 19</fullName>
            <ecNumber evidence="12">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_002904</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair. Required for pre-mRNA splicing as component of the spliceosome.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 12">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the WD repeat PRP19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="12"/>
    <dbReference type="EMBL" id="JBDODL010001287">
        <property type="protein sequence ID" value="MES1921370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16656">
        <property type="entry name" value="RING-Ubox_PRP19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038959">
        <property type="entry name" value="Prp19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013915">
        <property type="entry name" value="Prp19_cc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055340">
        <property type="entry name" value="RING-Ubox_PRP19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43995">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43995:SF1">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08606">
        <property type="entry name" value="Prp19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0227">DNA damage</keyword>
    <keyword evidence="12" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 12" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="10 12" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="11 12" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="7 12" id="KW-0747">Spliceosome</keyword>
    <keyword evidence="6 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 12" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="4" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="U-box" evidence="13">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU367101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1921370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15104" checksum="7102C52AD06EA31B" modified="2025-10-08" version="1">MNCNISGEVCEIPVISPFGHVFEKNLIEKHIKETGKCPVTEQSLKIEDMIQIKPSNRAAKPRPPTATSLASLLKLFQNQWDSTMLETFTLKKQFESVKQELSNSLYQYDAACRVIARLIKERDEAKQFFAKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP00</accession>
    <name>A0ABV2AP00_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002933</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001314">
        <property type="protein sequence ID" value="MES1921402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="19434" checksum="D97C2F1F3D91640D" modified="2025-10-08" version="1" fragment="single">LTLKSAISQNNNWHQQQYRKQFFHPENDRYRFQYQQQRQRERRSSPEPEFIAIPINEKARSFNENAQFLHKDDSRFEQEENVEKESEEALCTCRCHYPETEDATKLVPITTEIANFTTAQVKTEVPSSECLPCDKVFNFLQLDSRFSHFCKFSATIILIFEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP39</accession>
    <name>A0ABV2AP39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002979</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001357">
        <property type="protein sequence ID" value="MES1921448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9649" checksum="C66A800DF3A4EFAE" modified="2025-10-08" version="1">MNIRAIMPTEALMVFAAELPSSEVAMSTVNQVGYSRFRSRFLAVIKNFAFQYNLKLNENTISRKCPLSLKRLLLPHSCSVIRDLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP72</accession>
    <name>A0ABV2AP72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002999</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001377">
        <property type="protein sequence ID" value="MES1921468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16119" checksum="D2AB70AE5F8163DF" modified="2025-10-08" version="1">MDELSIADYESFELVCEFIKRVLIEAKSYEKNSSRMEGAVAMKILQKHSAQLVSKVLMCVYSQPKNFIPDLAEILTVIESMDKAGTKEVMRLTVNSKLGKIRSEIRENFLNDFSSAFSIEDKTDVLITFHGMCQLHYIKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP77</accession>
    <name>A0ABV2AP77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">tRNA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">LIG1</name>
        <name evidence="7" type="ORF">MHBO_002806</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent DNA ligase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001191">
        <property type="protein sequence ID" value="MES1921251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3260.10">
        <property type="entry name" value="DNA ligase, ATP-dependent, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050191">
        <property type="entry name" value="ATP-dep_DNA_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012308">
        <property type="entry name" value="DNA_ligase_ATP-dep_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036599">
        <property type="entry name" value="DNA_ligase_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45674:SF4">
        <property type="entry name" value="DNA LIGASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45674">
        <property type="entry name" value="DNA LIGASE 1/3 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04675">
        <property type="entry name" value="DNA_ligase_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117018">
        <property type="entry name" value="ATP-dependent DNA ligase DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA ligase ATP-dependent N-terminal" evidence="6">
        <location>
            <begin position="79"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="23722" checksum="3EB86D24F84C0A81" modified="2025-10-08" version="1" fragment="single">MLKIKNLAKHSKMDIRSFFSNNNSKKAFKTKAKTKFAKNKKAKTTLTKNSFLDEKTIVSDSVKTAIKKSCDKWKDNGVPFSAFCDALDKIEKISGRLKSIEIMSSLYAKVIKSSPKDLIPIVYLTTNQVAPPYENKETGVGDGIMYKVVEQVTGRKIKQDIRKSGDLALIAEKYKSEQKLLSKPAALTCFKVFKLLRSLADLEGSKVWLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG8</accession>
    <name>A0ABV2APG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003102</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001495">
        <property type="protein sequence ID" value="MES1921570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="257" mass="30661" checksum="1486ED383321AD76" modified="2025-10-08" version="1">MPKNKMVKSLKNVLCEDSKAIKKMTKKKLVKFINKKFSSEMSSIDFSLHENLLHELQTRNKTVTNLNKGFLKKKLYEELLSEKALAEKEKIYRSDVQNQLNSEKSIFVLREKLKSLLANRYRRQAVDLGVAEILNIRNTKQTFNIIGFRLELFFLMVEETRRRFMERFFKAKRPLKLLNLKNFDQFENLDILTRKLSEFIPVKSELKELNELDDVIDSEDPDDEKSNFKFRRVVVELQKSFRQIFQEVLKEQISKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API9</accession>
    <name>A0ABV2API9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003128</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001531">
        <property type="protein sequence ID" value="MES1921597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10149" checksum="51F00085821C7513" modified="2025-10-08" version="1">MELKVELVLDACFPDLVNSRMMEIFESSEDMEPPDLNCSIGNLCIMCKTFSAELSDCHICGYRFCPRCVWYFILPDKFYPKGFRKNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ2</accession>
    <name>A0ABV2APQ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine/threonine-protein kinase mTOR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001296">
        <property type="protein sequence ID" value="MES1921383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050517">
        <property type="entry name" value="DDR_Repair_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024585">
        <property type="entry name" value="mTOR_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139">
        <property type="entry name" value="ATAXIA TELANGIECTASIA MUTATED ATM -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11139:SF9">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11865">
        <property type="entry name" value="mTOR_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine-protein kinase mTOR" evidence="1">
        <location>
            <begin position="255"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="39917" checksum="84FCFA9B42536B2A" modified="2025-10-08" version="1" fragment="single">MFNLFSKNVPNNIRLHIVPYLDHEDTDVRKEAVLSCSNLLLEICKKTKYLNQYERLLSSDIIERLVLVGICDTDGEVRKTIFMSLYEEFDLFLSQEEFISNFFIALNDEILQIRQLAIKILGRLSARNPLFVFPSLKKIFVQLLFEIKNSSSEQHASDSNSLIAALFLAAPKLVCNYVDPIMNTIHPQLRKNDSSVAHALTAVGALSKASNSLIDKYQHELVPQLLSIVVSRNSCVSCKVALRTLRELFESGGKVVSPYSEHPNLLPAILVCLGAYNGFEVRREASKLVGYLGAWNPDLYRNMRDAKGWGGDKEDWGYLNEVELPVFREDRPDPRYFDVVAINEMVRILADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR2</accession>
    <name>A0ABV2APR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_002866</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the otopetrin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001245">
        <property type="protein sequence ID" value="MES1921322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004878">
        <property type="entry name" value="Otopetrin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21522:SF32">
        <property type="entry name" value="OTOPETRIN-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21522">
        <property type="entry name" value="PROTON CHANNEL OTOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03189">
        <property type="entry name" value="Otopetrin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="10" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="164"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="207"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="243"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="273"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="315"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="356"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1921322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="390" mass="44400" checksum="55EC38887AB44CB9" modified="2025-10-08" version="1">MKHDSGSSGCFDRYAGKVYNILSIVYTVLLSVVIFTKVCRGFKEVLLQKYLFVGILFSNFSFLLDTIFSETEELFDYGDSKETNNATYCNYIQENTDRIKKYDPLFSLGAVEFAILTIDMLFTTIQKQTAETRNVNDSQQNQPNEPTATGPTETGNLKYKKNGLVCLIPICVALSIILLVVSILAFNADSRHPDESESWTLSTPFKIYIITSSVIKFIMSVSLTLCIITSWHSFRYKFNVDGLILMTSLFGNIIYHMFYLFASLKDNPQENAYIYLVFTYFDNICSIIVAAQQTQFILAIENGENIPKTINERTVLVRYCCLILFILNIGLWAGDTLGEANATALSIIIKRNYGDVFWIIFTKLVLPFTIFFRIHSGLIMLKMFRNLKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS2</accession>
    <name>A0ABV2APS2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent RNA helicase Ski2/MTR4 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003060</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001457">
        <property type="protein sequence ID" value="MES1921534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3380.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050699">
        <property type="entry name" value="RNA-DNA_Helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012961">
        <property type="entry name" value="Ski2/MTR4_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131">
        <property type="entry name" value="ATP-DEPENDENT RNA AND DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131:SF1">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08148">
        <property type="entry name" value="DSHCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01142">
        <property type="entry name" value="DSHCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-dependent RNA helicase Ski2/MTR4 C-terminal" evidence="5">
        <location>
            <begin position="117"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="30830" checksum="F52B267B500B9864" modified="2025-10-08" version="1">MIKHHEKTISNIIAGVNKKLEKRRKKLISFFLKNLVLTEKEMSIVAEEAFYVTEQLAKFDFHGNFPFLDQFYKSAKDKIEIKKEMSDLDYLLSDESVPLIEDFERKTKILKELNFIGEDRSVLIKGRVACEINNCDSLILSEMIFENVLSDLEPENILSLISCLVFKQKNCSEPHLSRTQENSLEALIAIAQRIGMLQDIYKVGEGPQKYVEDSINPNLMEVVYQWAKGKDFSEICRITNVHEGVIVRTIVRIDETCRDLKSSFVNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ17</accession>
    <name>A0ABV2AQ17_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">B box-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003284</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001721">
        <property type="protein sequence ID" value="MES1921755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="167" mass="19858" checksum="27F45B5442F4F606" modified="2025-10-08" version="1">MSSKQKEPLKKIGNSSILPNNQDHKCTNCSLKRRLFKCQFCKKFFCSICSDYFKKDYSCIILNENLASDLIYSCYNCKIRNLKNNNEYEKYINSRKTFNLNINQNIVREPDWVNKNYSCQKCNTTSINKKFICNLCGETLCEKCKMFYYGNKDIYENPFNKSFLQNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ18</accession>
    <name>A0ABV2AQ18_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">60S ribosomal subunit assembly or modification protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SQT1</name>
        <name evidence="4" type="ORF">MHBO_003283</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001719">
        <property type="protein sequence ID" value="MES1921754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051179">
        <property type="entry name" value="WD_repeat_multifunction"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19857:SF8">
        <property type="entry name" value="ANGIO-ASSOCIATED MIGRATORY CELL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19857">
        <property type="entry name" value="MITOCHONDRIAL DIVISION PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="13"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="59"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="33092" checksum="A1CCBF23F3131CBC" modified="2025-10-08" version="1">MTEKGEENAFNGFYQHTDSVYSVDLSEDGFKAISGGGDDLAYLWKCDVRSSEPLEFKALTGHSDSVISVSFNVDFSKILTASMDGTIRVYSVSDGTFLKSLDGPSKEINWIKVHKNYDYVLSGSADGTCWTFNLSDLENPFMSAFARHLKSVSCGDFCDFEGTNAITASDDGQIFQWNYGDGSFERYLPNLNSQITNVSISSQIIIASTVNGSCVVISLKSGNIAFQLDCGTTSVESASLCNFDKFVFATSLDGSLGVWDISTKRKRFKLNLKVFKIILEWNHCSQSIGYKTFNRLRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF4</accession>
    <name>A0ABV2AQF4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glycerol-3-phosphate dehydrogenase NAD-dependent C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003437</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001920">
        <property type="protein sequence ID" value="MES1921906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="entry name" value="N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006109">
        <property type="entry name" value="G3P_DH_NAD-dep_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11728">
        <property type="entry name" value="GLYCEROL-3-PHOSPHATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11728:SF8">
        <property type="entry name" value="GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)]-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07479">
        <property type="entry name" value="NAD_Gly3P_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="6-phosphogluconate dehydrogenase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycerol-3-phosphate dehydrogenase NAD-dependent C-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14590" checksum="06F3C42042B6693C" modified="2025-10-08" version="1">MAEMQKFGLEFFDDIHKNTFWQSSGFADLITTCYAGRNRKCAQEFAKTGKSWDQIEKEMLGGQKLQGPSTCQEVYSFLENKKKLSEFPLFVQIYKISFGVEGERADPASVVTCFQENGMEDIVMNWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL1</accession>
    <name>A0ABV2AQL1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001979">
        <property type="protein sequence ID" value="MES1921950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8987" checksum="A2FAE2E5C79F6F9D" modified="2025-10-08" version="1">MRSVPRSQLDFKKFTFNQEFYTRGIVMCRDMLIFAIGFSPFVLGISYRYYFDEKNKKDSWYSQSATEMKEIQLGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR4</accession>
    <name>A0ABV2AQR4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003289</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001726">
        <property type="protein sequence ID" value="MES1921758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051044">
        <property type="entry name" value="MAG_DAG_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11614">
        <property type="entry name" value="PHOSPHOLIPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="Serine aminopeptidase S33" evidence="2">
        <location>
            <begin position="103"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="261" mass="29607" checksum="28CCD41054B7DEAB" modified="2025-10-08" version="1" fragment="single">MMIMVEQLYIVGAIIILSFSVYFGYFKSVSLLSPPTPTDSGHERRKMFKNTKNLQKLDYKHKKSINYGVPTEKLCISGSFFERNEEGFKFHVQIIKPVPPVVPKAVICFVHGYSSGAIYHMKQLCDNLSSGGFVVIAMDGRGHGLSDGLHCYIPDFEQYVEDYYQCFKRHSAPFESLNKFLFGISMGGAVCLHLLEKDRKANLFKGAILSSPMVKIPAKKIPNRFVYTIFVVCSYIFPSAKITPAHYDDKFYNDDELASFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV2</accession>
    <name>A0ABV2AQV2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Histone H2B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003386</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the histone H2B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001856">
        <property type="protein sequence ID" value="MES1921851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22910">
        <property type="entry name" value="HFD_H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000558">
        <property type="entry name" value="Histone_H2B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055333">
        <property type="entry name" value="HISTONE_H2B_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009548">
        <property type="entry name" value="Prkrip1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23428">
        <property type="entry name" value="HISTONE H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06658">
        <property type="entry name" value="DUF1168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00621">
        <property type="entry name" value="HISTONEH2B"/>
    </dbReference>
    <dbReference type="SMART" id="SM00427">
        <property type="entry name" value="H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00357">
        <property type="entry name" value="HISTONE_H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 8" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="9">
        <location>
            <begin position="178"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="277" mass="31107" checksum="04819E24D98FDF5F" modified="2025-10-08" version="1" fragment="single">FEMSEKSTLTKLEISDLQKDKKERPIRYEKYNEIRCFDVPSSVSGVGSNDFHLYRKLRRMNMEREIKLEEEYKNEKLVAAQAEHFIDLNAKEKLKTAKKAEKRQQPPMGYGKAGVGKMGIGKSGGKLNYENIALENPILGQQGYIGSDAHRPPAARHPPTGEKIFMSADGIPNTDSALKRKRSETYSAYIYKVLKQVHPETGISNTAMDIMNSFINDILEKISIESNHLAINNDMDKITSREIQTAVRLILPGELAKHAVAEGTKAVTKYTSSSAQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV9</accession>
    <name>A0ABV2AQV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003573</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002152">
        <property type="protein sequence ID" value="MES1922055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="21024" checksum="46CDFE942487C83B" modified="2025-10-08" version="1">MVQIKTRSSSNKPKISFVKKLKQKIIDFANFKKIVKKRKKLAKIGKKIDKKRKKIDKKLAKTDKIMGINIEGHKKIVAVLKLENEKTTLFELRKLLNEGFAKSTNHNTKKKLKNYSFLYPFPSLEVFPKNTENEVCAKNWMPIATITIEENRIKNRPSTRRIPLYQVLKSQSMLLNNLNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR48</accession>
    <name>A0ABV2AR48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Adenyl-nucleotide exchange factor sse1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SSE1</name>
        <name evidence="5" type="ORF">MHBO_003661</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002279">
        <property type="protein sequence ID" value="MES1922146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="entry name" value="Substrate Binding Domain Of DNAk, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45639:SF4">
        <property type="entry name" value="HSC70CB, ISOFORM G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45639">
        <property type="entry name" value="HSC70CB, ISOFORM G-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), peptide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="201"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="252"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="201"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="291" mass="33696" checksum="517ACE2BDD46EB8F" modified="2025-10-08" version="1" fragment="single">MDEIEYFSEELLKMANIEKNQLHSLEIIGGSSRIPLVKSTLKRFLGREISETCDGDESIAIGSTYKCAINSPMFRAREYKVIDTFPYSIEIAWGNIDEKGNFELEKRLVLFKSFSAIPSAKLLTFRKTDPFQVVFNYANPEELPPGTNTFISNCTINPPKTTTKNVTDNYINVKIALTFDGLIAIRSVFLHEEIAVDNKEKENKDLKENKKDLNDDDNKENKKVKKEKKTKINFVTNEGYVPLKFVEEAMLKEKEMSDFDKKYDRIEELKNELESFVLEARSDVENKWKHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF4</accession>
    <name>A0ABV2ARF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003736</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002428">
        <property type="protein sequence ID" value="MES1922227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23385" checksum="71F0EAA65F21D97A" modified="2025-10-08" version="1">MATGAECNFPPGLRLIDLETSKQSKFFTQNRFKNLESTIVSFDFAKFSFTEFAETKLKYEYFLVYSNNIGFVYLNGLGLDAFKDNKICDNSVRIADVVYFENGDIPCSKIPAGPKKISISGPFPSITKPKKYISIKIKQYEKMFRFCKIIFANSLNFARNQKKGIYQTNMISRVLFKRSNNKKLIYVYSMRNGHLCVSLLNNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF5</accession>
    <name>A0ABV2ARF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">40S ribosomal protein S27</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">RPS27</name>
        <name evidence="1" type="ORF">MHBO_003761</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002468">
        <property type="protein sequence ID" value="MES1922255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.100">
        <property type="entry name" value="Zn-binding ribosomal proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023407">
        <property type="entry name" value="Ribosomal_eS27_Zn-bd_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9505" checksum="2F97D253D58D710E" modified="2025-10-08" version="1">MPVDLLYPDPQEEQRKHKLKRLVMRPNSFFLDAVCDTCNTMFHLLKPTELLFSATLRQSFFVRSAIKSCPSHLAAKRELVKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH7</accession>
    <name>A0ABV2ARH7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DOP1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003781</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the DOP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002500">
        <property type="protein sequence ID" value="MES1922273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040314">
        <property type="entry name" value="DOP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007249">
        <property type="entry name" value="DOP1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14042">
        <property type="entry name" value="DOPEY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14042:SF24">
        <property type="entry name" value="PROTEIN DOPEY-1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04118">
        <property type="entry name" value="Dopey_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0653">Protein transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="DOP1 N-terminal" evidence="4">
        <location>
            <begin position="12"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00046326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15743" checksum="C4997D1A28B81CE3" modified="2025-10-08" version="1">MLNKVKSAFINQEKLYESEMNKILISFDQTDQWLDLVKSLKNLDIFLKEIIKIKQKNSQKTIFSFQPFLRQIFISLNKCLDSKMPSGIHQKTLETYDTFFVALNNEQIAENLAFFSFGLFNVLENASERVLDMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK0</accession>
    <name>A0ABV2ARK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003804</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002537">
        <property type="protein sequence ID" value="MES1922295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="21"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="217"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="329" mass="37619" checksum="981152D7236469D8" modified="2025-10-08" version="1" fragment="single">MSPYLGIDDTPTVLDPGPREDDGEELPDYEDESTDSESTEREGAEHRCASSADDESNDYTKQDRRFPDLEIYLKGLGSNYDRELDRNDWGYYEGGHYYSYPSDDESNNTMDEAFEFPRHDPRSKIQDSRPDRTSPSARLVEAYESPIRTPPRSQIGETPESPNRDQSSPRTQLSSSSSDDSLSNGGGGTDIDDGDQHLRESPEPSPNRCCDDEDVDHMEFSYHEDEQSMDFSDEDGPMGNMTNMLSEFIKRVNHCSDEDKRFYNNSDAESIIIDDSDNNEFEFTEKRVEDAVLDGVEDDRIKRVSRRVDRRKITNVPIDEFLRCDTSDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ8</accession>
    <name>A0ABV2ARZ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003821</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002571">
        <property type="protein sequence ID" value="MES1922314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04371">
        <property type="entry name" value="DEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="91"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="224"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="27146" checksum="B8D5F70C8861C6DA" modified="2025-10-08" version="1">MISRIHLGKEYMDCFLTKDLIQEISSVKKVKKKQAMEMGQNLLKHGYISGFKEETELLERRTFYTFKNPDEVIPLKKNVENNTNLSEIPIKKTNLKPSKPKKPAKLNLESENTKKAPQKKEPPKKATESENERIAALEKMFEEERKKREELERQLEQQKKTSSKPIAQSAAKTVEVEASDAKILEKPVTKNEKSETESDESEYEYSEYYSEYTEYSDSEYTTENASSGLENKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI0</accession>
    <name>A0ABV2ASI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myosin heavy chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003953</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002814">
        <property type="protein sequence ID" value="MES1922439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.2610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57997">
        <property type="entry name" value="Tropomyosin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="11"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="167"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="238" mass="26881" checksum="2CA291C5C9B5FE1B" modified="2025-10-08" version="1" fragment="single">SELENRSGKFIEQAETLNNNLTSTREALNTERGKNKTLTEALDKLKADIEQLDNHYNESECKLGIANEKLALSHADILNRDAQIMQKEGELADAISQFTHKDTEYQETVKTLGTTEKALTESEKTVSELKDALQATKQELSTTTNIMNEMDTIDEKTELASMTNGTLTDHEKRIAMLRTELDGATKTSDRLKIEKQQLQESNGKLSTQIKNCEKNIERLQEEKTKCEETIGRLTTDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ5</accession>
    <name>A0ABV2ASJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Condensin complex non-SMC subunit Cnd1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cnd1</name>
        <name evidence="1" type="ORF">MHBO_003880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002685">
        <property type="protein sequence ID" value="MES1922373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026971">
        <property type="entry name" value="CND1/NCAPD3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222">
        <property type="entry name" value="CONDENSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222:SF2">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="31142" checksum="6BEC4ED5FB0A08E3" modified="2025-10-08" version="1" fragment="single">VKSNLKNRGGESEIAHNLAKLVSELDSHKELTCVEELIVLMSRNNKIPDKIVPALWDNFEKQIKILKTEENFEDGQKFQISNRIDISLNSLFIVSIIAQTKPQIVSEQFGQICDFFIENLKNFAFFTNSMLSYSTTMYKYFFEIAERCNKIKKLEQTQLEKIENLAIWLILDEKAIDERKWFSVAQKAVNAIFSLSESPSDSITKTLKQFAEEKNFKQPNDLAKFLFLVGAVAMAVLVLMEKQENSLKALKARKDKIDNLIATEKGENAKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX4</accession>
    <name>A0ABV2ASX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004299</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003663">
        <property type="protein sequence ID" value="MES1922775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12078" checksum="A1EE172FBDB8AEB5" modified="2025-10-08" version="1" fragment="single">MIPPHYSYTYIKSFCTKHGIPFEHGALSDRDLYDILVMIIFLLRKYAIHALLFSTVVELYTLFRIDKARKDKQHRKISESAYKREILKRGIGSLSAILGTTIGCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT51</accession>
    <name>A0ABV2AT51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004378</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003883">
        <property type="protein sequence ID" value="MES1922850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="271" mass="28420" checksum="CED4D786C48C8F68" modified="2025-10-08" version="1" fragment="single">MTSKRYGLSGISSSVELGKNGLKLVNNGSQVELRSNDGLSLVELRVADGTVNNAVVTKSQLDEKQGSLSIAPGSQNYLELQGDVLSVKNLLVHDVVVDNVQVDIASYVAANYTGSELQQGDILILMNATDSQKRSYIHNGGVAGDATDFTRLQVDLSESVIRAMFSAGTGISYNPATGEIAVDATAAEISSDPTGLVLVTGNTAQAMFASIDSVLDSFNNRISSLEATVAAFEPNNLTHFRKVAFDYQSGATFNIGALVPAGSLIKKVAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT77</accession>
    <name>A0ABV2AT77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cytoplasmic FMR1-interacting protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">CYFIP1</name>
        <name evidence="1" type="ORF">MHBO_004389</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003910">
        <property type="protein sequence ID" value="MES1922860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008081">
        <property type="entry name" value="Cytoplasmic_FMR1-int"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12195">
        <property type="entry name" value="CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05994">
        <property type="entry name" value="FragX_IP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22743" checksum="255C64DAD4E050A3" modified="2025-10-08" version="1">MGGSTLSGMLFRYTRCIYESKFAEQSRGQFYCEPATGLSSRNDMTLVCNTIKFIVCNSQREEKDCVNDYDNFGEGLIWAIAMLIYSVNQQNRFKTTDFCSYLLSLNEKDDESKMSQNKKSNRTTILPLSKRAESFINLSKRFKHAYETAMLVLEKHYKPPNRFIEIENEDGKIEWAEDDYGQIFETSKDQCRNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE3</accession>
    <name>A0ABV2ATE3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Endonuclease/exonuclease/phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_004397</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
            <location evidence="3">PML body</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003934">
        <property type="protein sequence ID" value="MES1922869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051547">
        <property type="entry name" value="TDP2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15822">
        <property type="entry name" value="TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15822:SF4">
        <property type="entry name" value="TYROSYL-DNA PHOSPHODIESTERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endonuclease/exonuclease/phosphatase" evidence="11">
        <location>
            <begin position="8"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1922869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="11178" checksum="F51AB2C2172A1FF4" modified="2025-10-08" version="1">MADKFKILTWNVWFSDLCVSERMRQIVAEIKLHNPHVFCLQEVTFENLEHLLSNLAMEKLTQYKTSTDLCYHVERKSAYFNLIFSRLDFYVIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF2</accession>
    <name>A0ABV2ATF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004472</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004098">
        <property type="protein sequence ID" value="MES1922941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008081">
        <property type="entry name" value="Cytoplasmic_FMR1-int"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05994">
        <property type="entry name" value="FragX_IP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11474" checksum="0C4ECC0070907242" modified="2025-10-08" version="1">MRVMKSLRELGNTLCVVKILDSVFNNKEVMRHMNLTHFYGITSSKKLFFHQNLGKIENFKKFDHRDANLFSKHIRNIAINSASDPDFCDKAEKIVFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ4</accession>
    <name>A0ABV2ATJ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">RPB5 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004243</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the archaeal Rpo5/eukaryotic RPB5 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003502">
        <property type="protein sequence ID" value="MES1922718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1340.10">
        <property type="entry name" value="RNA polymerase, Rpb5, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.940.20">
        <property type="entry name" value="RPB5-like RNA polymerase subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00025">
        <property type="entry name" value="RNApol_Rpo5_RPB5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014381">
        <property type="entry name" value="Arch_Rpo5/euc_Rpb5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005571">
        <property type="entry name" value="RNA_pol_Rpb5_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036710">
        <property type="entry name" value="RNA_pol_Rpb5_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000783">
        <property type="entry name" value="RNA_pol_subH/Rpb5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020608">
        <property type="entry name" value="RNA_pol_subH/Rpb5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035913">
        <property type="entry name" value="RPB5-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10535">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10535:SF0">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01191">
        <property type="entry name" value="RNA_pol_Rpb5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03871">
        <property type="entry name" value="RNA_pol_Rpb5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000747">
        <property type="entry name" value="RPB5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53036">
        <property type="entry name" value="Eukaryotic RPB5 N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55287">
        <property type="entry name" value="RPB5-like RNA polymerase subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01110">
        <property type="entry name" value="RNA_POL_H_23KD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="RNA polymerase Rpb5 N-terminal" evidence="6">
        <location>
            <begin position="4"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase subunit H/Rpb5 C-terminal" evidence="5">
        <location>
            <begin position="140"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="213" mass="25329" checksum="775ACB8E20756A57" modified="2025-10-08" version="1">MESEKEYSHLWRVYKTISQMLRDRKYLVADELYDMEFKAFVEKFESVDLSTETRRIKREDLTMRTLKETDDSNVLFVFFCDKKKIGVDYVTDLMRKLKTDGANRAILILRENITPFAKKVIHSAAPMFVIELFKESELLINVTRHIYVPKHVLLSDEEKEELLQQYRLKETQLSRIKKDDPIARYYGLEKSQVVKITRPSETAGRYVTYRIVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX0</accession>
    <name>A0ABV2ATX0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein S4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004690">
        <property type="protein sequence ID" value="MES1923104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="103" mass="12557" checksum="12935DB9A9101416" modified="2025-10-08" version="1" fragment="single">HLRLSQIRLKSQFSFLQKIQKFVQKRERSLRICGSRRIRNLKRRKISNFKNNSKKSVDSIFEQIGFSQKRTKRTSNFYFLRQRINVARLEELYVANKVSNQRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ7</accession>
    <name>A0ABV2ATZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004677</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004832">
        <property type="protein sequence ID" value="MES1923134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="20259" checksum="A4D4366CEBB758C6" modified="2025-10-08" version="1">MSDIDSADFVPELQNAWESNEKHEVLMFVMKNDGSLVFAVDTVPKTITYAPFNGVTNEEYQYQANSVSFNNFAQRGLCVNTHKLAEQFGLESTGVGVFTAGSAPLKRATRYKNGQAYVGTPASNATVYLLGPSNNIGVTDLAASIQTTASGTLINAPETFNMLVGEGSDPALRNVYSFTAAPLLVYPAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU62</accession>
    <name>A0ABV2AU62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005046">
        <property type="protein sequence ID" value="MES1923190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="14644" checksum="560862956356FA39" modified="2025-10-08" version="1">MVVTDVAFKILGSGSADEPLETLYTEDELGETWEVKTSTDGHIETLKEGDLPENIVHHVVRDNFDSNSFNIDEDGVIGLRNEQTILNRLTKLDDEIVITEAAIQAGWYIELDYDPVTKRPSLAAKQRTNPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF5</accession>
    <name>A0ABV2AUF5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Casein kinase II subunit beta</fullName>
            <shortName evidence="2">CK II beta</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004567</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the casein kinase 2 subunit beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004422">
        <property type="protein sequence ID" value="MES1923033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1820.10">
        <property type="entry name" value="protein kinase ck2 holoenzyme, chain C, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016149">
        <property type="entry name" value="Casein_kin_II_reg-sub_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035991">
        <property type="entry name" value="Casein_kinase_II_beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000704">
        <property type="entry name" value="Casein_kinase_II_reg-sub"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11740">
        <property type="entry name" value="CASEIN KINASE II SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11740:SF0">
        <property type="entry name" value="CASEIN KINASE II SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01214">
        <property type="entry name" value="CK_II_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00472">
        <property type="entry name" value="CASNKINASEII"/>
    </dbReference>
    <dbReference type="SMART" id="SM01085">
        <property type="entry name" value="CK_II_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57798">
        <property type="entry name" value="Casein kinase II beta subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18003" checksum="D6451E2DCCAD4B6B" modified="2025-10-08" version="1">MILDTDSSGFEHIPDNTIKSICKDAATLYGLIHARFILTGLGLEAMHEKLNEGEFGKCPRVYCRKALLPVGLYDEFGLESVKMFCIGCNDVYQPPEGMERVDGAYFGTTFAHLFYLAFPELVPKDKKVKLYEPKVFGFRLHSTAHERSIECKKTGRSVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ4</accession>
    <name>A0ABV2AUJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004882</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005629">
        <property type="protein sequence ID" value="MES1923326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13351" checksum="F935D3EB2552D401" modified="2025-10-08" version="1">MLRFSKKPKISFCRYYSNFDKNELNKFDKFAQNFRDPNGSMKMLHKMNPVRTKFIRNIAISHYKIDKNEPFPLQNKLVLDVGCGGGLLSEVSKTFTTIFVDLKNRVAINSPWRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK8</accession>
    <name>A0ABV2AUK8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA-dependent RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RdRP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.48" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010005713">
        <property type="protein sequence ID" value="MES1923342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057596">
        <property type="entry name" value="RDRP_core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05183">
        <property type="entry name" value="RdRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RDRP core" evidence="2">
        <location>
            <begin position="2"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9759" checksum="CF078AE815FCD676" modified="2025-10-08" version="1">MREIMVELALPFNLRTISAVQIRFKGFKGMLVHDPKASKIHFTKSMLKFNDYSVTSPLGVINWSRPYMPGYLILHYGFQRYNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR6</accession>
    <name>A0ABV2AUR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pre-mRNA-splicing factor rse1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RSE1</name>
        <name evidence="2" type="ORF">MHBO_004680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004865">
        <property type="protein sequence ID" value="MES1923137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018846">
        <property type="entry name" value="Beta-prop_RSE1/DDB1/CPSF1_1st"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050358">
        <property type="entry name" value="RSE1/DDB1/CFT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10644">
        <property type="entry name" value="DNA REPAIR/RNA PROCESSING CPSF FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10433">
        <property type="entry name" value="Beta-prop_RSE1_1st"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 first beta-propeller" evidence="1">
        <location>
            <begin position="3"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="20897" checksum="1B275FBC0654D4FE" modified="2025-10-08" version="1" fragment="single">GTDRDFIALGSDSGNMVILKFKSDKNGFEVVQNEVYGKTGCRRAVPGQYLAKDPKGRAIMIAATEKQKLVYILDRDTNENLIISSPLEAHKSSTICFGVVGLDVEYENPLFASLEIVFSALEDLDIKPEERVAQKVVTFYELDLGLNTVTRKQLIEVDPNANMLTAVPGGEEGPGGCLVFSFNWVVYISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU1</accession>
    <name>A0ABV2AUU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004696</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004905">
        <property type="protein sequence ID" value="MES1923153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="23362" checksum="95EAD2BB9F5E1B64" modified="2025-10-08" version="1">MHKIQWTLSKISKPDGFEFHKKALFKNKHKKALLEQINKDNKPGKVLKKLLYKEGKRTFRENNYFGLYYKSTKKSCFDGAYSDFLGACCRLINCSRGILFRVLNKIESKMEIAERVLSFKNEQKEISPIYKERSVNLRKKMKLISPVKKRGPLRFLRKWQNLQNGDFYYDCLCNNMVPTKIFTNARKHLYKTTCLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV0</accession>
    <name>A0ABV2AUV0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DNA-directed RNA polymerase III subunit RPC6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">POLR3F</name>
        <name evidence="6" type="ORF">MHBO_005003</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006179">
        <property type="protein sequence ID" value="MES1923431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007832">
        <property type="entry name" value="RNA_pol_Rpc34"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016049">
        <property type="entry name" value="RNA_pol_Rpc34-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12780">
        <property type="entry name" value="RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05158">
        <property type="entry name" value="RNA_pol_Rpc34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17703" checksum="E2DA26F785A83CD8" modified="2025-10-08" version="1" fragment="single">MKNSQNKLIYKLVSSSVAKTLSTLNTRERIVYKLILSNGTNGMWHRDLRHKSNIESTYAMAKIIKNLIKSKLIKIVPSPDGSNRKTYMLYNLRPTQKEWVNSFNSGHSIDSELVEKTYNACYDFICMNVLIFNDFSFLIFFLRSIFCCCCKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV41</accession>
    <name>A0ABV2AV41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Charged multivesicular body protein 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CHMP6_2</name>
        <name evidence="7" type="ORF">MHBO_005126</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endosome membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SNF7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006747">
        <property type="protein sequence ID" value="MES1923538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22761">
        <property type="entry name" value="CHARGED MULTIVESICULAR BODY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22761:SF5">
        <property type="entry name" value="CHARGED MULTIVESICULAR BODY PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0967">Endosome</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19685" checksum="5B44E951D70F5129" modified="2025-10-08" version="1">MESVMKEEDETVRKLLKEGHRSKATFILRKKRFQQNLLDGTDSKLLNIHKLLESIESSALNKEIVSSLKDGKKALDQINKELDVDKVMLLLDESEEAIAYQKEIDNLLNKKLNDEDDEAVREELEQLINSDKREVLERKEPLSLRKKESERRSVEVVEIERIESNLITV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV83</accession>
    <name>A0ABV2AV83_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006912">
        <property type="protein sequence ID" value="MES1923563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="22"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15446" checksum="8814025C34E6E2E4" modified="2025-10-08" version="1" fragment="single">MAKIDNMMLCFFCIRDYKHKKRKRVEAAKNDFEAKIKRAKEKAVLLSAENKSKSKHNLFLDKKIRIKVPEELSEIVKRDDLVEELEKRFEEYKLKEDNFSVLSRIFYSRNLESESDIDLETFNGLRSCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVM9</accession>
    <name>A0ABV2AVM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Replication factor C subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RFC1</name>
        <name evidence="3" type="ORF">MHBO_005048</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006344">
        <property type="protein sequence ID" value="MES1923471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BRCT" evidence="2">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11346" checksum="C6472C7BD8D85148" modified="2025-10-08" version="1">MTGVLNSLEREDAADIIKKYGGKVTSAISGVTSYLLKGEDAGPSKIQKAKDKKTKIIDEDVLFDLIRKNSPNITKRQNAKKNLIKDKRKRNNDKPVTIQKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVR0</accession>
    <name>A0ABV2AVR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Splicing factor U2AF 26 kDa subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">U2AF1</name>
        <name evidence="7" type="ORF">MHBO_005010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006199">
        <property type="protein sequence ID" value="MES1923438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009145">
        <property type="entry name" value="U2AF_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12620">
        <property type="entry name" value="U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01848">
        <property type="entry name" value="U2AUXFACTOR"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="16"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="5">
        <location>
            <begin position="16"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11749" checksum="B1B2201E8D2E922B" modified="2025-10-08" version="1">MLSGGAGYLARIIGTEEDKVNCSFFYKIGACRHGDSCLRLHLCPDFSQTLLLSHLYVPPPPLPDGGFVDEKETYERFYEDMFSELSQYGPLEDLAVCDNLGDHLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW25</accession>
    <name>A0ABV2AW25_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidylprolyl isomerase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005111</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006651">
        <property type="protein sequence ID" value="MES1923527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="143" mass="16170" checksum="F0B2238D5C25F634" modified="2025-10-08" version="1" fragment="single">SYNKDVFENAQVAARNGVSFDKFYDAYFAQKDVKTKDDKKKAIDNASGKLNDKEKYALYQSLNVGASDERMEKFKPLKSKGMKETDFLKYMDAIDSAKGIKNQRTGRTVSGTLKNAQYKALTDAGMSKPQARYFMTVMLGSKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWA7</accession>
    <name>A0ABV2AWA7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Reverse transcriptase/retrotransposon-derived protein RNase H-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005272</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007471">
        <property type="protein sequence ID" value="MES1923654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051320">
        <property type="entry name" value="Viral_Replic_Matur_Polypro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33064">
        <property type="entry name" value="POL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33064:SF37">
        <property type="entry name" value="RIBONUCLEASE H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="118" mass="13746" checksum="4F9F243F446394CD" modified="2025-10-08" version="1">MRLGLANYCRLVLLNFSRIAVPLRTLTRNNVHWKWTEKHQEAFDKLKQSLVSVHCTNYCLTGKFTQNLHQKLNIITLGQETENTMKILNKEQITNDARKNHNYGLVISHFNANPDVIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE45</accession>
    <name>A0ABV2AE45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000032</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01040">
        <property type="entry name" value="Mb-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="entry name" value="Globins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044399">
        <property type="entry name" value="Mb-like_M"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="Globin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13789" checksum="C80E534594CEE4A0" modified="2025-10-08" version="1">MAIFNRLIEKNKKYYNSFQSCINGEDPLKQHDLLVSSIQFTISNLKNWEVLKQKLIQTGSRHEEWMPGLKIDIFEDFITSFHKAMIKLFPNYGENGVLENFTILLRLVMRVMEEQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE80</accession>
    <name>A0ABV2AE80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000063</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase M16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000008">
        <property type="protein sequence ID" value="MES1918034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001431">
        <property type="entry name" value="Pept_M16_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050626">
        <property type="entry name" value="Peptidase_M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032632">
        <property type="entry name" value="Peptidase_M16_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054734">
        <property type="entry name" value="PqqF-like_C_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690:SF18">
        <property type="entry name" value="INSULIN-DEGRADING ENZYME-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690">
        <property type="entry name" value="NARDILYSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16187">
        <property type="entry name" value="Peptidase_M16_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22456">
        <property type="entry name" value="PqqF-like_C_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00143">
        <property type="entry name" value="INSULINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase M16 N-terminal" evidence="8">
        <location>
            <begin position="28"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M16 C-terminal" evidence="9">
        <location>
            <begin position="180"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M16 middle/third" evidence="10">
        <location>
            <begin position="373"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="domain" description="Coenzyme PQQ synthesis protein F-like C-terminal lobe" evidence="11">
        <location>
            <begin position="761"/>
            <end position="857"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF16187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF22456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="975" mass="111929" checksum="6E3F3EDE06BF66D6" modified="2025-10-08" version="1">MASNHIKITKPVSDYKDYILVRKDKIPIVLVHDPKAQLNAMAISIGVGSISCKKINGLAHFIEHLIFQGGKKNQSFQKTTSELGGLTNAFTAGLQTVFMASFRSEETERAIREFTEMLLDPKFEIEESEKEIKAVNNESVMDKDKDGWRTMLVLKDIIRNKTDHPYSIFGCGNSETLKDVKREDIVDFWEKHYAKHPIRITLYTKQPFDEVIPFLKPFLHLQTEDERIEISENPFEVLQGLRINVSSLCETNTLCFNFPMKPVYFKPTAGDMYPLQLLIQNPADLEAALVDKQLASQVVAGLDENTPFGCVFSIEVQLTERMTTEEGVASVTALLFSFLENLKNMYSGDEGKERTERHLEYAAYLKQFHFDQRDSHSAFDEVTEIVLNTDRNLPDLRNVLQNSSKIVIEDARESFLEGLAALNPQNVFMVFSRKNHPEDKVPNEEKWFGARYGVVKMNIPTTEKFNVGATELIHKYVEPTLFEAPDYEKREKGVSVFIKNRTSFKKLLIYMRTNLVLNKISFPDGMDLKDLFVFHIVADLLNKSILREMSHYSRIGSGFSIGVSIEGFSLTMSTYPEHFSEMLDSAVNYLNQFIQMDFDADLQKYIRHWFEHAKKDLVSGIANEKIVQPYQQCQYLLDQLMLDNEKTIEQKLQIAENLSLNDLERINKIFGNKENSKFGVRMLLLGNTFPDLQHYVEKAFQEYFENSIPDEQLYERKINSYESDVYLRQKATAPGTKNSGVIVARSLGSADDLREILVELLKDRESDPFFADLRTKQSLGYIASITSFKRGTQLYLGAVIQSSDKGPDLVKKAIEDFFSKFESDLFKGPIFMERITNLEKKLKEPDKSLLECLERYWNEIDSMRLDFEHKENQLRLLQSIKKDEKLVTKNLLEFMKTKNTIYAMVSGADHVDEVRVHDGSTKLDDQELAIRKEAVVSFKNKGGSPPSAAKSVMKIQTISSYEFYNKGINKSIEVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE88</accession>
    <name>A0ABV2AE88_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">FUZ/MON1/HPS1 first Longin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000076</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="232"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="474" mass="54696" checksum="841AB52CD6B0107D" modified="2025-10-08" version="1" fragment="single">NSVESTSFGSHLYERLASLSIEENSLYPKNPLPPIGTKPPQNPHENDTSLSDFDLSELEGSLFTEESSQNENESKDSHSVHPQYIMSSAETKSLNFGLRSSRGQVPTNPINHEKQLNQWLSLCRGPRKTELLTLKNYFVFDGKLFFMDTSDSIDIPESKNIPEVRKIIVNLTHLNIKNEVAKDFNKTAEFLINQLMTQELLSKDCHFYKTDFCNNYSIVIVPSTKWNSIKSLLYNVIYCGFYGNFVGCFFFCGHFVLAFQYNGIKQNKISLNSFTLRQIVAFLCFLENKGFRLVKEFQSNGMFLDDRENITFNRLDIDTLYKGPAYNAAIITRFLTGNQTIKYDQSALQGVIDDINYCVRGKNRFLASNIKLLMENLLRSPLYFSEPQLPNVFLVQVRGNNFYIFFNDGSVRSGQIKEGKCENFRKWAYHYFVTKQNVLPEWTAHYLKGNKLYYVFGATYGNINFYAYTDESPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AES9</accession>
    <name>A0ABV2AES9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000198</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="9780" checksum="656C171A18FC92C0" modified="2025-10-08" version="1">MIFKVDETNVTIGKTSDNRFVIKTNKVLKANGLQSKERANELLLKSKFSKSSKPNEFDGSALKILTEPSELADDIKSENGCLLTSRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF09</accession>
    <name>A0ABV2AF09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6722" checksum="C70A05F054F93541" modified="2025-10-08" version="1">MGLRILVVVSCFSVREIDETHRSVQSRVRTNINNENFERKRDGSVDVVFVNGDIRGMLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH9</accession>
    <name>A0ABV2AFH9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Signal recognition particle 14 kDa protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000385</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SRP14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000059">
        <property type="protein sequence ID" value="MES1918417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.720.10">
        <property type="entry name" value="Signal recognition particle alu RNA binding heterodimer, srp9/1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003210">
        <property type="entry name" value="Signal_recog_particle_SRP14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009018">
        <property type="entry name" value="Signal_recog_particle_SRP9/14"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02290">
        <property type="entry name" value="SRP14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54762">
        <property type="entry name" value="Signal recognition particle alu RNA binding heterodimer, SRP9/14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0733">Signal recognition particle</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="111" mass="12594" checksum="8BC3A7AD663570E9" modified="2025-10-08" version="1">MVLLDHDKFFDQLAHSFQLANWDGGPQTIKITFKKCKLKLMGKGSPSLKTRGEKRAADSSGTPVLGFFCLVRAQVGSSKTSTEVREADCAVFKERLENMFYYYTEKNFNDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR7</accession>
    <name>A0ABV2AFR7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CSN8/PSMD8/EIF3K domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000472</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000074">
        <property type="protein sequence ID" value="MES1918507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006746">
        <property type="entry name" value="26S_Psome_Rpn12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033464">
        <property type="entry name" value="CSN8_PSD8_EIF3K"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12387">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12387:SF0">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10075">
        <property type="entry name" value="CSN8_PSD8_EIF3K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0647">Proteasome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSN8/PSMD8/EIF3K" evidence="2">
        <location>
            <begin position="105"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="30961" checksum="464860CF5ED73406" modified="2025-10-08" version="1">MNETRTLSEASKLAEKIDRAEKEGKLDEVADATKSLKALLYKYSTPSENSINEKNISFFLLSRFALEVSALTDLLKKDFLGFENNVNILIPFYFDLNDNLENSDKKELILGLVLLHYLSENRTAAFYNLYEKMDRATSGSQNVRFALRIKKCLDRGSYSHILNCYCELPSPFYGYLMESLIKSTKAKIFEAMEKSKSEMTKESMIRIAGTELTAEDVKKLGEERKWKVDSEGTVHFEDENSSLTKEQLLNKASDNLMSLSYALVKDSERIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU8</accession>
    <name>A0ABV2AFU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Plectin/eS10 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000512</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic ribosomal protein eS10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000084">
        <property type="protein sequence ID" value="MES1918559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005326">
        <property type="entry name" value="Plectin_eS10_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037447">
        <property type="entry name" value="Ribosomal_eS10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12146">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12146:SF0">
        <property type="entry name" value="RIBOSOMAL PROTEIN S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03501">
        <property type="entry name" value="S10_plectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Plectin/eS10 N-terminal" evidence="7">
        <location>
            <begin position="3"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="94"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="101"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17118" checksum="0C257E8FA87D5B7A" modified="2025-10-08" version="1">MLISKKNQRSVYAYLFQSFKLTKTEGTLVVENNAKLSSHPQIPIPNLHVRLLMRSLKSRGLVDSTSTWKRLYYTLNDDGIQFIREFLHLPTSAIPDTLSKPVDEQKSSFDQGQRRKPEKRDAYRKQPATKTVGAPEGFKPEFGDRPQPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV7</accession>
    <name>A0ABV2AFV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000527</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000087">
        <property type="protein sequence ID" value="MES1918576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="556" mass="66069" checksum="4E616808F38C8C81" modified="2025-10-08" version="1">MLFYIIKAIMSNIFRTNSRRFAKIKEANAKKQDQFWHFDYAVKQKTQILFQETKLAPKTNDPVKRSLFKLVSNDVFNSFSTNKMAEEWTSYQKHAFCVFPISPEISAHHIGSNMQKIFGKDLSGFEILPYDENLRSLKPDSDNPLRGTILTNLTVNKRIIRKSKNSSKQDYQKKVKDTLRILQFYLKGLSLWPNIQNHYSSKHRKKPWIGNFWTDRPKFMRFVIERLETDLKESIISSWHSQQRIKLLALHKRFDTIVCSKSQLPEAKKKGYGKMRFLSNKTPFGYSNWSDFSFFAYSKEMPMTKPIVLPKIGKVFVLDRPDQSRFKIKVYYDKNGRCFLEYQSKSMIKKLNEKRKLKIWKLTDSFYSFYKRGIDIPGTKMDKSYLLRKYAIVYLNKKIEPFRLINLQCLGTNLGKALAKFNEINYKLNVTISQNRKQKMIEEKFLKKFENMESTQIQQNVKQIKFANLGDTINSYFQLRNLGCQTEFMYKKIHKENEKIKYVLGKEQGISEPKLKDSEIEKLFKIQKELKEHYKIFKEHPIFEDEECSYDDPPSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY9</accession>
    <name>A0ABV2AFY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000544</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000091">
        <property type="protein sequence ID" value="MES1918600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="SMART" id="SM00233">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PH" evidence="1">
        <location>
            <begin position="36"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="24254" checksum="E75414AF545858D5" modified="2025-10-08" version="1">MSLTDRSNEVNYFFEKNKIIRTEKTKIAVRQSVFKFLLQGVVLKVPRKILPNKRYVFCLRRVDRNVYFQAAIYFYPEGAWNKINKIPLTDIVAVEGYETRKWEKNRLCFKIMTPDDKYKFICSSQKEKGMLTAAIRFLICEKIVRRSSVNRIPKHKLIRPNEIHIKDILHHIIGFSPYSFTKTNLKIPKTVQRIERKNSIKSKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ2</accession>
    <name>A0ABV2AFZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000547</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000092">
        <property type="protein sequence ID" value="MES1918603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="41"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="5">
        <location>
            <begin position="218"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="2">
        <location>
            <begin position="218"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="169"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="303" mass="35685" checksum="921CFFE34BA32F4E" modified="2025-10-08" version="1">MRLEQIKNLFAKNAITFTPKNKIENEPSKSFFNKKLINKDQTVILSNYPEWWSTSKLEKIFLKFGKVKNLKIIFPIRGKRFCKTTFYTRKEAKNAVDILNSTIFSYKIVSAALKSDLELVKSEESKNERSFGDFGTPSNYRLLSLNFQKQLKSTEKYFQNLNMGRIKTDSNDIEDSSSSENTSTDSSSEERVFFRKTGNSFLRKGDYRVLRMGSDSRQPPRKVCIYFQKGICRKLTDCTFMHFWPEDICQRFIRGDCDIKDCNLVHVDSENRIYVPSNGQIRNERRFNEKRVDEIVKEDKREY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK3</accession>
    <name>A0ABV2AGK3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Tricarboxylate transport protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000534</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000089">
        <property type="protein sequence ID" value="MES1918584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049563">
        <property type="entry name" value="TXTP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45788">
        <property type="entry name" value="SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45788:SF4">
        <property type="entry name" value="TRICARBOXYLATE TRANSPORT PROTEIN, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="40"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="140"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="233" mass="25808" checksum="2289D375398BE88A" modified="2025-10-08" version="1">MYRGLSCLLFFSVPKNASRFFAYENLRKLMEGPDGKISTGKTVLCGLGSGLFEALTVVTPMETLKVKLIHDQLQNAKGQRKYRNFFHGVYRIVSEQGIAATYRGLSATLLKQGSNQAIRWLVYSKLKAAFAKEGQAPNSIGPLKTALAGAIAGAASVYGNTPLDVIKTRLQGLQAHNYNGFVDCAQKIWREEGPLAFYKGVTPRMMRVCADVAIVMVVYEQVMRFLDIVWKTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK9</accession>
    <name>A0ABV2AGK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000353</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000051">
        <property type="protein sequence ID" value="MES1918382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="383"/>
            <end position="405"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="460" mass="53462" checksum="8E3D3E05F71F0868" modified="2025-10-08" version="1">MRNKKVGLTLYRPIRLTDMYLDEDNNLVIAIADVVFDDDRKVLFEIERNSLIATLNNFNGIMNCTLDHFSHYLEYIKILTSHSWELTNHELFTQLGENNYSAMFSFIKDDTLHCMQLKNKSVPPVVCKTKLENRNHFDMIIPSSDNENIYVKIIDVEDELYSKYGCFITDLCLGKELCGKYCIYYLDSNRFNYIQTFLHKHEDQLVKKVVIKRENSSRQLTFAGIPQLFMEKVFSFMTKFPMAKSMNWEEHSKSLVSTSEGLLKDKSHLQNLEQKYKVNLTRLMLYLMDKMPAHGLFLGEPLHTQDLSITDEGYLQATAFAFTATSMNHYDNVVKSLENLQSMFGHLQEFDQLMVSAKLYSSTEKLLELPFFVKGKLNANPRIAAMVCPSFLILVFGGETMLISYQNQKAILQEKIQINDTKYLLQVYPVDTFNKLELCLDQVAHYETSQKFVVLLNTLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM8</accession>
    <name>A0ABV2AGM8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Calcium-transporting ATPase</fullName>
            <ecNumber evidence="14">7.2.2.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">MHBO_000743</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Catalyzes the hydrolysis of ATP coupled with the transport of calcium.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>Ca(2+)(in) + ATP + H2O = Ca(2+)(out) + ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18105"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.2.2.10"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="14">Membrane</location>
            <topology evidence="14">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.2.2.10" evidence="14"/>
    <dbReference type="EMBL" id="JBDODL010000138">
        <property type="protein sequence ID" value="MES1918846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.150.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006068">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004014">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059000">
        <property type="entry name" value="ATPase_P-type_domA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006408">
        <property type="entry name" value="P-type_ATPase_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01517">
        <property type="entry name" value="ATPase-IIB_Ca"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24093:SF369">
        <property type="entry name" value="CALCIUM-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24093">
        <property type="entry name" value="CATION TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00689">
        <property type="entry name" value="Cation_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00690">
        <property type="entry name" value="Cation_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00122">
        <property type="entry name" value="E1-E2_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00120">
        <property type="entry name" value="HATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00002">
        <property type="entry name" value="C1.7:_P-type_atpase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00831">
        <property type="entry name" value="Cation_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="Calcium ATPase, transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 14" id="KW-0106">Calcium</keyword>
    <keyword evidence="3 14" id="KW-0109">Calcium transport</keyword>
    <keyword evidence="12 14" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="13 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 14" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="121"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="150"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="299"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="342"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="774"/>
            <end position="792"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="804"/>
            <end position="822"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="843"/>
            <end position="869"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="889"/>
            <end position="907"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="928"/>
            <end position="947"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="959"/>
            <end position="979"/>
        </location>
    </feature>
    <feature type="domain" description="Cation-transporting P-type ATPase N-terminal" evidence="15">
        <location>
            <begin position="57"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU361146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1918846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1018" mass="113434" checksum="26E3A15356919F15" modified="2025-10-08" version="1">MSFVIRTSSFLKATQRVSVKNLQTQPSNLDEHDFFYDAEILSSLTSRWTEPVLSLGRLSQLGGPEGISRALRTDLREGLFSDEVEGSDFSKRESVYGANRFEKKPPRNFFLFCLDELKNPILVVLLVAGIISVVTGIAHNPEEHGYTEGLAIIFTALIVVSVAAGNNYAKERRFRALDDKNDAKSVIVVRRGREEVVANTKVLVGDLIALSTGVSVPCDGILVSGSADLTCEESALTGETDAVRKSRRKPFLLAGTNVADGEGLMLATAVGARTCWGALLKGLSADHAKTPLERKLQKLVKIIGIVGAVLSVLIFVFKFVYWVVENYPNNTYTDNLEEPLEYFLVSISLLVVAIPEGLPLAVTITLAFSMKKMFRDNNFVRVLSACETMGNATTICSDKTGTLTQNTMTVVEAWPEVFEPSVDGPWPVFREPRPSSDFCDALLEGIALNTKAFEIERTKWKRSDRPEYAGGNKTECAVFSWGHCLGAENEVIRQRTPIEKAYPFTSATKRSSVLVRHNNAYRMHMKGAAEKILNDFCTKILTPEGEIASIDEKKRMQIEEEINSKVSRGLRCICLAFRDFDSSTILNSYDQIVDPPLVDFVFVAIIALKDPLRPDVLDSVQRCQQSGIVVRMVTGDHPKTAEFIAAECGIRPTEREDLLVMTGEEFRVMDETACNKKLPKLRVLARSTPQDKERLVKWYMKNNDTVSVTGDGANDALALKEADVGLSMGIQGTDVAKEASDIIILDDSFASIVETVKWGRCVYDNIRKFVQFQITINTVAVLVSFIGAFVNYNDITDFPLPFNPVQLLWMNLLMDTGAAVAYSTESPTKNLLKRKPYKKNSMLINPTMWKHIIGQSVIQIILLLIFVLPTKNPIGFAIFGISSQNKNDYLLLKTCVFNTFVWFQIFNSINTRRVNDELNIFENIFSNLFFPLVFGFFAVMQIILITFGGSVVSLTKLDLAQWGKCIAFGFVSMPLGLVLRSIPFKREYGFISSDGDLNLARENKKSIYTKSIKRKLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR4</accession>
    <name>A0ABV2AGR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000769</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000145">
        <property type="protein sequence ID" value="MES1918874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12429" checksum="20DF8FDF018A82B7" modified="2025-10-08" version="1">MQNIAYPHSRNFLKLESDSFPKILRKTISKCVKVAKTDDSTLNLQQLISMNKTSFLNPIGLFRAGSMSEGQLLKYQIDYLKSISMIEKTRDDSDAFSKLKLSLFAEEMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX9</accession>
    <name>A0ABV2AGX9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000803</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000153">
        <property type="protein sequence ID" value="MES1918913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="30703" checksum="660F2C4F0F4430FC" modified="2025-10-08" version="1">MLDCDSVSDIEKIHFLQESFNVLGIPEYTSIIKRANIEEPKNINFIEELIKRHLSFNPFVAIIFFDKNSTEEKHFNEIELHFNRLKELKQNGIIQFEEALVFSPKGEKFDRNLKRLNSLFTKIDINPKILYPDSVDNKQVINMLKTTHSNYFGKALKSLEQKKLVDLNKQREFARENLFNKVISALMAEAIQNFKHSAKLWKDVYSDVFEYIFLMKDGEFVEIMEIAAFAILKVSELILAIETRFGETTDSGFVKSVLSSFGEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH25</accession>
    <name>A0ABV2AH25_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Sm protein F</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000623</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the snRNP Sm proteins family. SmF/LSm6 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000108">
        <property type="protein sequence ID" value="MES1918698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01722">
        <property type="entry name" value="Sm_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016487">
        <property type="entry name" value="Lsm6/sSmF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034100">
        <property type="entry name" value="Sm_F"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11021:SF0">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11021">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006609">
        <property type="entry name" value="snRNP_SmF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 10" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6 10" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 10" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Sm" evidence="11">
        <location>
            <begin position="6"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR006609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9666" checksum="CCAB66A438FB474A" modified="2025-10-08" version="1">MHQPTNPQPYLTDLKGKQVDVKLKWGIIYKGFLVSTDPYMNLQLANTEEWIGGNLKGKLGEIFVRCNNVLYVREIPEEDGDEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC1</accession>
    <name>A0ABV2AHC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000198">
        <property type="protein sequence ID" value="MES1919098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="11439" checksum="AC9A17E59550DEE0" modified="2025-10-08" version="1">MERKYCYLLKNDAVFANKKEILQSLWKICFYEIIDYYRRGIDHVFKIYLVFEISRYHEKGKFDHFLQKISSRFVIHFKNIVERIFGPIEIAPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG0</accession>
    <name>A0ABV2AHG0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA helicase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000980</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000203">
        <property type="protein sequence ID" value="MES1919116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041562">
        <property type="entry name" value="MCM_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056575">
        <property type="entry name" value="WH_MCM3_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF46">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17855">
        <property type="entry name" value="MCM_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23191">
        <property type="entry name" value="WHD_MCM3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM AAA-lid" evidence="2">
        <location>
            <begin position="45"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="MCM3-like winged helix" evidence="3">
        <location>
            <begin position="208"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="136"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="162"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="277" mass="32446" checksum="D4CDDA050F2E1B10" modified="2025-10-08" version="1">MDEVEENGETEIFERFDRLLNDKPFFEEQINGQKIRKKNQFFTLDFMRKYIEYAKTQSHPVLSKEATEKICAAYCLIRNREENTTLPITARYVETMIRFATAHAKLRLSQIVEEIDVEKSLEILLYSLGGEAALSANEENEMSDKENDVQSTQIEPVDPVSKKSKSALKKAPMRRKLSHKKDEKKSKKLKKRQKVESDEEKENKPSERIDETRKKIVMTVISRLTRRSGLDITVSEVMNIVNKQTERKFEKKEFDEIIRSLEESNKIMVADNIIHRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM3</accession>
    <name>A0ABV2AHM3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleolar protein 10-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001036</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000215">
        <property type="protein sequence ID" value="MES1919172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056551">
        <property type="entry name" value="Beta-prop_NOL10_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040382">
        <property type="entry name" value="NOL10/Enp2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14927">
        <property type="entry name" value="NUCLEOLAR PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14927:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23098">
        <property type="entry name" value="Beta-prop_NOL10_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleolar protein 10-like N-terminal" evidence="1">
        <location>
            <begin position="7"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF23098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="343" mass="39152" checksum="950C9E2C8218A6D2" modified="2025-10-08" version="1">MPLPSTVSNGVKAYNLSAAKISPKWETAKSEKNRVEEPDRENSIELLQDFSFPSSTTLIRISEDNGHLVTAGTYKPQIKAFELSQLSLKFERHLEEETVDFRILSEDYSKLCFLRRDRFLEFHTQFGSHYKTKLPQNGRNMIFNRFNCDLLIASSRKEVYRLNLEEGRFKKSITTDLELNHGALHDKLRFYAFGGEDHVACFDERSNGEIASFEVQKSLENGSETVNGIRRIAFDKSGASNDLLMAVGTGSGRTLVYDIRMKKPLFAKDHRNERPIVDLSFHSSDKFVSADQNGIKFWDCKTVFATNFGILVIAEFIKILVDKDLNLSLKYISSFVGMSTLHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN4</accession>
    <name>A0ABV2AHN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001049</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000220">
        <property type="protein sequence ID" value="MES1919186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044244">
        <property type="entry name" value="TTC27/Emw1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16193">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16193:SF0">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0802">TPR repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="22346" checksum="8967F482E2BDE9A1" modified="2025-10-08" version="1">MSRSKAELTDPKKMARALSQFEVIEAYWNDESVLLEDRKKGFWTGMWTTGSRWQRSESLAKAHLRLGFYWNALTVFERFEDWKPVATCLLHANRLADVEEVANREIKRGNKEHELLLFLGHATAQPHFYEQCWEASEFRCSEAKRCLGHIEFKNENVSLQTFCQNEKYFLNFASSKISGKRRWSIMKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN9</accession>
    <name>A0ABV2AHN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ycf1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000788</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000150">
        <property type="protein sequence ID" value="MES1918893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="146" mass="17853" checksum="AD56D4F5F7357551" modified="2025-10-08" version="1">MPNQKNYFVNLKLLKIKTEKSNHFLGNLKIDSNDYYSELLLLEIKKLQKDFKKMKLECKLWQNNFFYRKEPILPNMQRNNPKWRNIQRRKSLFDLELNKAVVERDNKLSKVHNVEENEFMETLIQKKFKKKNSDLVKANLELFLRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP0</accession>
    <name>A0ABV2AHP0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF5600 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001067</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000225">
        <property type="protein sequence ID" value="MES1919204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.268.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040990">
        <property type="entry name" value="DUF5600"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11216:SF31">
        <property type="entry name" value="AT21416P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11216">
        <property type="entry name" value="EH DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18150">
        <property type="entry name" value="DUF5600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5600" evidence="2">
        <location>
            <begin position="90"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="231"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="245"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29563" checksum="9CC88BC834034A58" modified="2025-10-08" version="1">MKEAIYALKGHDDKIRCILNKADCVTSQQLMRVYGALMWSLGKTVKTPEVPRIYIGSFWDQQFLEKTCAELFEAEESDLIADLRSLPRFSMVRKINELVKRAKMVRIHALLISHLREKIGFFGKAKKQKKIQRNLKVEFEEVMDKYGLPRGDFPNVLQFRSALETVELSSFKKLTKKAIQRLEVALSESLQSKIKIFRKYWAVFRNISIRKKICKSSTKKKSSVVQTIPKKTENTFSSTKKRSTTETNCTNRKDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU7</accession>
    <name>A0ABV2AHU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">MHD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000732</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000135">
        <property type="protein sequence ID" value="MES1918832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09250">
        <property type="entry name" value="AP-1_Mu1_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1170">
        <property type="entry name" value="Mu homology domain, subdomain B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050431">
        <property type="entry name" value="Adaptor_comp_med_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036168">
        <property type="entry name" value="AP2_Mu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001392">
        <property type="entry name" value="Clathrin_mu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018240">
        <property type="entry name" value="Clathrin_mu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028565">
        <property type="entry name" value="MHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10529">
        <property type="entry name" value="AP COMPLEX SUBUNIT MU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00928">
        <property type="entry name" value="Adap_comp_sub"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00314">
        <property type="entry name" value="CLATHRINADPT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49447">
        <property type="entry name" value="Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00991">
        <property type="entry name" value="CLAT_ADAPTOR_M_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51072">
        <property type="entry name" value="MHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="MHD" evidence="5">
        <location>
            <begin position="1"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28808" checksum="11C5E3A58931FFF3" modified="2025-10-08" version="1">MVNEHGKVIQSEINGVIKMKSYLSGMPELKLGLNDKIMVSRNASKKVSPAKGVELDDIKLHQCVRLSRFESDRTISFIPPDGDFDLMTYRLNTHVRPPFSVKVQTDFKPLSKIEYFIRIKSEFKQVSCANNVRVVVPVPFDADSPRFDTMAGTAKYDPSSNSFTWLISQFHGSNAFELRAKFGLPKVENEESKKNTAMNHIKLKFEIPYYTISGIQVRYLKIIEKTGYSALPWVRYATKNGNYLVKIQKLDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI12</accession>
    <name>A0ABV2AI12_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nuclear transport factor 2</fullName>
            <shortName evidence="1">NTF-2</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">NTF2</name>
        <name evidence="3" type="ORF">MHBO_001175</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Has a role in nuclear-cytoplasmic transport of proteins and mRNAs.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000256">
        <property type="protein sequence ID" value="MES1919324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00780">
        <property type="entry name" value="NTF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.450.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045875">
        <property type="entry name" value="NTF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002075">
        <property type="entry name" value="NTF2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018222">
        <property type="entry name" value="Nuclear_transport_factor_2_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12612">
        <property type="entry name" value="NUCLEAR TRANSPORT FACTOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02136">
        <property type="entry name" value="NTF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="NTF2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50177">
        <property type="entry name" value="NTF2_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="NTF2" evidence="2">
        <location>
            <begin position="9"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU369002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14374" checksum="5D0E5321B9A511C5" modified="2025-10-08" version="1">MNQSDVQNLAKNFLSSFYGKYEEDRTSLDQFFSNQSMASIEGTHAMGKANIKNAFINQIKANKIRHQVTTFDAHPLPDGAVFIMVTGKLRIDNDANAVNYSESFLLKKDPSIGNYYIHSNIFRINYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI66</accession>
    <name>A0ABV2AI66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA mismatch repair protein msh6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MSH6_1</name>
        <name evidence="7" type="ORF">MHBO_001221</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA mismatch repair MutS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000272">
        <property type="protein sequence ID" value="MES1919376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1420.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011184">
        <property type="entry name" value="DNA_mismatch_repair_Msh2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361:SF148">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MSH6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05192">
        <property type="entry name" value="MutS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005813">
        <property type="entry name" value="MSH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00533">
        <property type="entry name" value="MUTSd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="DNA repair protein MutS, domain III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00486">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair proteins mutS family" evidence="6">
        <location>
            <begin position="444"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="243"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS00486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="521" mass="60133" checksum="932091D998E7B431" modified="2025-10-08" version="1" fragment="single">IFENEEGGKQNTLFEWLNRCSTPFGHRLLKEWVARPLCNIQNINKRLDAIENLMELPELAEQISKKLNLLTDIEKMIIRIRAYSLQKRKIVFYENIDLKYLRIFVQIINSLKICCEIIYLFKRIKNKIFSKKLIELVFDLFPKECEEKLRISEKIDIEESEEKQKIVPKGQISEKFENIKEEMNLIKSKLEQHLNKYKKIFNDPSICFFEGFISNYQIEMKSETANQKLSEDLIEVSRTSKKRRFTTNEIKSLVEELEILQEKKNEYLESYLKTVLAEFCDHSKMWSAAIKSIAELDCILALYNVSAFSTGSMVRPFIVKNQEKPFLELKQSWHPQISFSEQTTSTTGFVPNDIFIGDGADTKAMIIVTGPNMGGKSTLLRQTCIAVILAQLGCFVPAKSAKLSLTDRIFTRIGANDAILANKSTFFVELEETSNILNNATENSLVILDELGRGTSTFDGAAIAFAVCEHLSKITKCRTLFSTHYHLLSKYYRKSNFVSQWNMAFEAIGSKLIFLYKFQKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI90</accession>
    <name>A0ABV2AI90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001238</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000278">
        <property type="protein sequence ID" value="MES1919400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="7975" checksum="5A107B1F1A378CAF" modified="2025-10-08" version="1">MKNSKERPKRNKNKNKIASLEKIKRIREGDASVFEEMDSNSNDLFVHVTEKEFKDLAEEKNEFIVGSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII9</accession>
    <name>A0ABV2AII9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001312</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000307">
        <property type="protein sequence ID" value="MES1919489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="173" mass="20412" checksum="E8D799A7B76FEC55" modified="2025-10-08" version="1">MGNILHKKGRIPTTLEEENEPIPKMLPTWEKVLDSEKEEFEACKCSFAAKGNERCCKSIKDFRISREICCNEKISVYEVIDTGTKERFAVKIYDKREGEKYQNNEIIILTILRDIEGDFVRCEHLFSTMTHNIIVLELFVSNFFKYMKHRKKMLSLEMASFIMILKMILKMEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK3</accession>
    <name>A0ABV2AIK3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Vta1/callose synthase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001179</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000257">
        <property type="protein sequence ID" value="MES1919329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.270">
        <property type="entry name" value="Vacuolar protein sorting-associated protein vta1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039431">
        <property type="entry name" value="Vta1/CALS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023175">
        <property type="entry name" value="Vta1/CALS_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04652">
        <property type="entry name" value="Vta1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Vta1/callose synthase N-terminal" evidence="4">
        <location>
            <begin position="9"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="82"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="96"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04652"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21593" checksum="1E78D4BD0421A3E2" modified="2025-10-08" version="1">MSKIAILQIENAFVQEKNDQLSKNTVKLFYSASLILETLRNLKQMDGEDDRKLVERIKFCKFKCVQLTKKIEHLPIENLKLSENSRQNENNESDETMQNLPNQISKKNNENDLSENFQFNIDEKEPRKQTQIGDMINKGQNKRQRMNTILKGEELLNESVKALRLDDVKSAIVLIDEAKRVLGDLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIS7</accession>
    <name>A0ABV2AIS7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001373</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000327">
        <property type="protein sequence ID" value="MES1919564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051309">
        <property type="entry name" value="ABCF_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42855">
        <property type="entry name" value="ABC TRANSPORTER ATP-BINDING SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42855:SF1">
        <property type="entry name" value="ABC TRANSPORTER DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="73"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17215" checksum="CBEB50E7F68A9E05" modified="2025-10-08" version="1">MAMSATRFVVSVPRKLFGHARAKCLLRFFRPVATLAPEGMAKRSAMQFKESDFVLKAESISKKFEDEETFYILKDVSFRCVRGSKVAITGVNGSGKSTLMRILAKKDKNFEGTLKFGDPSTTVAHHSQEIVFDEKETILDYLKTTSDICFSDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT4</accession>
    <name>A0ABV2AIT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001397</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SNU66/SART1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000335">
        <property type="protein sequence ID" value="MES1919596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005011">
        <property type="entry name" value="SNU66/SART1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14152">
        <property type="entry name" value="SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14152:SF5">
        <property type="entry name" value="U4_U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03343">
        <property type="entry name" value="SART-1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="97"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="331"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="331"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="358"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="533" mass="61913" checksum="F72736D0DE46B59A" modified="2025-10-08" version="1" fragment="single">ILSKMNGNIGVSHQITDFEETPRILTLEDELIVGKDGKLNEKDDTLHSAELREEEIAKRNIRRRARLPDAEDRFGDSLLPGSSSILPQYNEPETDLAKSNFSLNHPNFRNQNELKSSNKNDEAKSAILKDLKQNRKLSSDYFSRDEFTINKQRKLKKSRKSRINDKTEKPEIVANLKIVSRGSRRRKSSIILKNKKRENGENEKNTETEKVLKMDDKKFLLEKERERQFVQNKEAKAAEKAVLDKVRDNEVDDEDEDDLYKIMADQRNALFMNAAEISDKIRKSIDTQNRKKFLEENIKNGYNETEDFLQSIEIKRNDKFNADDFIKPENTNFDKSYLTENNKNRSTKNKKSNQNDTEQDKIEKNETNEETLKYEPVLDKIVGSEPLASSSVSDALKLFKMRGFLSGKDKHDFIGRQNDEKPSFFKENELNKSNINLEYLDPKTGRRLTRKQAFRNLSHIFHGRNPGDIKKSKLKRDMKNFRDRHAKNSTETPTGLVSKTKKSAKRLNRPFVTLDNNKNAAFVKLDKTGKFAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ1</accession>
    <name>A0ABV2AIZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001262</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000285">
        <property type="protein sequence ID" value="MES1919424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="19682" checksum="A4782D5A1B929967" modified="2025-10-08" version="1">MFLFGKRFFSGSALQLSIEKFNYALLEGSLPVGSVVEFADGSFGIVNFVVKKRVLALTFNRKVREGAGATALHNRFLFKFEFSSFGSCVDVLGRPVLGSEPANRRTALAQLLEDRFGHKKVFLDVSGRECVPFLKRVRLKSVYRFRDLLLDSFCPVPYGSSLGIFGDRFIFNVFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ03</accession>
    <name>A0ABV2AJ03_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">SUMO-activating enzyme subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_001294</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ubiquitin-activating E1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000298">
        <property type="protein sequence ID" value="MES1919464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2660">
        <property type="entry name" value="Ubiquitin-activating enzyme E1, SCCH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.20">
        <property type="entry name" value="Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028077">
        <property type="entry name" value="UAE_UbL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030661">
        <property type="entry name" value="Uba2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019572">
        <property type="entry name" value="UBA_E1_SCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042063">
        <property type="entry name" value="Ubi_acti_E1_SCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033127">
        <property type="entry name" value="UBQ-activ_enz_E1_Cys_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953:SF5">
        <property type="entry name" value="SUMO-ACTIVATING ENZYME SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953">
        <property type="entry name" value="UBIQUITIN-ACTIVATING ENZYME E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14732">
        <property type="entry name" value="UAE_UbL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10585">
        <property type="entry name" value="UBA_E1_SCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039133">
        <property type="entry name" value="SUMO_E1B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="Activating enzymes of the ubiquitin-like proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00865">
        <property type="entry name" value="UBIQUITIN_ACTIVAT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="THIF-type NAD/FAD binding fold" evidence="9">
        <location>
            <begin position="2"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-activating enzyme SCCH" evidence="10">
        <location>
            <begin position="306"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin/SUMO-activating enzyme ubiquitin-like" evidence="11">
        <location>
            <begin position="416"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="509"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="544"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="7">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF10585"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF14732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="574" mass="64787" checksum="0B8C86A1BD62077C" modified="2025-10-08" version="1" fragment="single">KKILIVGSGGIGCELLKNLVVTGFVDIHIVDLDTIELSNLNRQFLFRQSNIGQPKAIVAKRRSENFCRDARITAHHGNIKDARFGTPFFQKFDLIINALDNLPTRRHVNRICVALGKPLIESGTQGYSGQVYLIKKGFSECYECVEKMAPKTFPVCTIRDTPEKPVHCIAWAKMMFGVLFASDEIENSEMSDMKMAKREDENGLEYARRLYEFLFERTILDRLEAIKLKENFADSNGKKPVPLKLSDFISESKNGFLKENGLSEENGLLKEKGFSKILKKKDLLENLSNGFLAVVEKILKDGNAFHGFDKDDGTAMDFVHFAANLRMANYGIDTISRFKAKGIAGNIVHAIATTNAICAGLMAIEAWKVLIAQNLKKCQRSWIQLNYAGSRIIQPEALSPPSKKCIVCSKQSINMVCNTRVLTLRELFDDVLKEKLGMVEPVVDVTYGSHANFISEDISDWDGNEKWMADYFQNPLSREAIKINHGSMLTVSDDKQKFTLKIMVSHQQDLGEEENDERFKLSKNVTPRVDHSKTQMSGNKRKSQKDGKESVEDKNKKAKERDDDVCVISDESKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ05</accession>
    <name>A0ABV2AJ05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001429</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000348">
        <property type="protein sequence ID" value="MES1919633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16648" checksum="C84BF5503B169BD8" modified="2025-10-08" version="1">MENYLGDNTEILNTNLQRQRLKAFPGLYADRSHSMYIGNSGMRRFHHETNPFKIPSNAGLLRQPSMADSLIAGYAPADLSRWEYMAPFGYEERKIGGNAAELSSEKTGIGTDRKKKTQRPKKQNGEQKLNRIIELCLKMKLQKDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ44</accession>
    <name>A0ABV2AJ44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001476</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000367">
        <property type="protein sequence ID" value="MES1919691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="379" mass="42792" checksum="CC64124041816E95" modified="2025-10-08" version="1">MKTRSDSQNTKTPISHGRNRLYKTPQTERNMIDLGKSPSNSIQNAKSLTKSADRYIPSRTTLNSNFVRAIFNRKIKSAKKQKTKSDNFDISKSEAGNPLLNLSKENLDKNFEDTFLDKSAAEICRNVETSNEDLGNNESTDWADSSVNNNSTLELSKGNVHNCLNDDSFNANRGLTGRKKQIGASYSPCSASSKSASKRVRNELNSETFLGMQNISQKWNQRILKFNEAMDAATNSENKIVVRKVLNHTPTRSLKKRKKLEERLLKVQKSAEKVLDAPSIIKKPELNLMHWTLAKIGKTHFTKTDVLAVGLAEEVYFWFVEQNKIESLSALRSDNKNNENNVISRADLNVSCVLWFGSAFLAGFPKNSIRDFFNNFIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ50</accession>
    <name>A0ABV2AJ50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001484</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000369">
        <property type="protein sequence ID" value="MES1919700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13169" checksum="093698B826CD43ED" modified="2025-10-08" version="1">MNFIFGATLGSGGLMLLKKSKKSAIANAIFASGYFLAWLIKFILRYKGRTNERNGYLIGTANSALFTSLVLWRYYVFKKTAAIMRIAMFGGFAGFFNFACLLDILNIQRKLEAEKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ82</accession>
    <name>A0ABV2AJ82_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001152</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000250">
        <property type="protein sequence ID" value="MES1919297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.150">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="18736" checksum="5586845AEEECB35B" modified="2025-10-08" version="1">MGLIKAIIGSGFLACTITMAIIMMIYPNWGVSTLSDGSKVYTGLFSFYTEKNGTSSDWVNYKDIDDKSFICGLDCDSFDSGNDAVFSLVLTAAILMAVAIAALLLLMCCAKISRILTWILVVVSTVCVFAAIMTYRYSVWNYIKGRSVSFDFCFYLAITLNIITPLANVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC0</accession>
    <name>A0ABV2AJC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001529</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000389">
        <property type="protein sequence ID" value="MES1919753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="260"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="104"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="104"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="127"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="285" mass="33305" checksum="A74995C1836D3AF7" modified="2025-10-08" version="1">MQKFHEEMEQSEEEVKKAQKIIENAKNVDPDNILNDNFKVGNAVLANMKMVISAAECCQNYPKSTLKCATSFYSLLKEKMDVFVLSRDYCFDLKTKKPQILDGKNIEEKMKKENKNEKSVKTGNENQKLDKQKIKKKEENSEKDKSTNKKSTEIKIEKEENNEEKISDSDETSNNKKAVKNISKEMKVSSGDNIFKILIDRIKKVEIDHSVIRKLVHEQNLEFVKYSEETEKRIENSLNSIYHINKRIDGLRKSNANFRAFFGLLTVINFLMNVMLLVYIYKRRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC5</accession>
    <name>A0ABV2AJC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Regulator of nonsense transcripts 1-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">LBA1</name>
        <name evidence="14" type="ORF">MHBO_001548</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DNA2/NAM7 helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000396">
        <property type="protein sequence ID" value="MES1919775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd21407">
        <property type="entry name" value="1B_UPF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18039">
        <property type="entry name" value="DEXXQc_UPF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18808">
        <property type="entry name" value="SF1_C_Upf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045055">
        <property type="entry name" value="DNA2/NAM7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041679">
        <property type="entry name" value="DNA2/NAM7-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041677">
        <property type="entry name" value="DNA2/NAM7_AAA_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047187">
        <property type="entry name" value="SF1_C_Upf1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040812">
        <property type="entry name" value="UPF1_1B_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018999">
        <property type="entry name" value="UPF1_CH/ZBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887">
        <property type="entry name" value="DNA2/NAM7 HELICASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887:SF364">
        <property type="entry name" value="REGULATOR OF NONSENSE TRANSCRIPTS 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13086">
        <property type="entry name" value="AAA_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13087">
        <property type="entry name" value="AAA_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18141">
        <property type="entry name" value="UPF1_1B_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09416">
        <property type="entry name" value="UPF1_Zn_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51997">
        <property type="entry name" value="UPF1_CH_RICH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0347">Helicase</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Upf1" evidence="13">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="745"/>
            <end position="888"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="12">
        <location>
            <begin position="777"/>
            <end position="791"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="792"/>
            <end position="808"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="842"/>
            <end position="855"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="856"/>
            <end position="867"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="871"/>
            <end position="888"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1919775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="888" mass="99566" checksum="22BADB6F02FF9542" modified="2025-10-08" version="1">MNWDLSQWVPLIKERSFLPWLVQAPPEREVARSLKASSAQLRKLEELWEHGNDGATLPDLDRQELEDEVEPVMVRYSDAAAFTRVFQPLIALESDFDRKAREAQKQKGVAIRWAAGLGGRKRFYFRLNRDIERSSRVVKGDEVVLNYPGDVVNKRWNGDGVVLEITTEDEILVELNGGKNAPIAQTFGFNIDFVWKAVPYTRMKNAVNCFANDDYSVTGFLYHVLLGHEISPQHIAADLPSKVSAPGLPELNKSQEEALRNSMEQPLSLIQGPPGTGKTVTTASIVYHLAQRQRGQVLVCAPSNIGVDHLTAKIHATGLKVVRLTSRSREMVTSFVDFLYLNTLTDTLAKKIDSEVYKLQQLKEMQGELSASDRKRYFRSRLKLEQELLENADVICATCVGAGDPRLRDYRFKQVVIDESTQATEPEVLIPITKGAKQIVLIGDHCQLGPVVMCKKAASAGFDRSLFERLVMLGVRPVRLQIQYRMHPALSEFPSNTFYEGSLQNGVSTEDRKQKTNSNFDWPDPETPTFFYASVGQEEFSASGTSYLNRMEAVNVEKIATKLIKAGVSSEEIGVITPYEGQRQYIVSNMLRTGSLNKTWYDEIEVASVDAFQGREKNYILLSCVRSNENLGVGFLSDPRRLNVALTRAKYGMVIVGNPKVLSSNGLWHSLLSHYKKHHLLVEGPLESLTECFTRLSEPHGHFERKRLWAQHDNEDRDYYRQQADAGGGENGEDDKEHVPEQYSYAHPGEIGPLNIRRSPVVNKKDRARSTKMGAETQFSMSSTQEMSQSQKHSNIGATQDYFSSQTSRGEDNDDSDSAFDSGAMPSQATFADSNGEEEFTQHLQSQRGNQTQPEDQVDALEADFDDLSVGYQSQESTGTSSVSDSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE8</accession>
    <name>A0ABV2AJE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquitin-60S ribosomal protein L40</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">UBA52</name>
        <name evidence="2" type="ORF">MHBO_001575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000407">
        <property type="protein sequence ID" value="MES1919810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015496">
        <property type="entry name" value="Ubiquilin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10677:SF3">
        <property type="entry name" value="FI07626P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10677">
        <property type="entry name" value="UBIQUILIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8676" checksum="39CC3AB7BFED52E6" modified="2025-10-08" version="1">MLIYIKTLSGDKKEKDFDPDKQISDLKKLISETEMVSTKHIRLINSGRILKDSQTLAHYKILPGDTLHMTIHLRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJL9</accession>
    <name>A0ABV2AJL9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein L2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000424">
        <property type="protein sequence ID" value="MES1919860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="19"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="125" mass="14471" checksum="50A7E70D8B5C22D0" modified="2025-10-08" version="1">MNFRRYGGSTMLMSSNYPRRGFNNGRGIRGTARGRNIGRFRAGRSSINYLQTRFAKNEYRYPGRPHQNSGNWMDVHRANGAPSLHNARKNIRSLKTNVNFKRKSNDYRIKGQKKPRPPGPNTFIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ2</accession>
    <name>A0ABV2AJQ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein YIF1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">YIF1B</name>
        <name evidence="10" type="ORF">MHBO_001303</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Has a role in transport between endoplasmic reticulum and Golgi.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Endoplasmic reticulum membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Golgi apparatus membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the YIF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000302">
        <property type="protein sequence ID" value="MES1919477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005578">
        <property type="entry name" value="Yif1_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14083">
        <property type="entry name" value="YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14083:SF0">
        <property type="entry name" value="YIP1D-INTERACTING FACTOR 1, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03878">
        <property type="entry name" value="YIF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 9" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="90"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="128"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="219"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU368073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="26990" checksum="73403F2F14871EF2" modified="2025-10-08" version="1">MSIKSIFTDNFSDFGENIAKNQIDQSMEKLQTDFELTNYKSYFAVDNIYVFKKLSILLFPFQNKEWARKLSVNDQGENIYYLPKEDKNAFDLYIPIMAFVTYILLSAIKTGLSGPTFTPEFLLKTTSSSLIAFSIELVLLKIFLHISKSDLSVIDAISMAGYKFVAVNTTILFYLVTGHIGYYLAWVYSTAALVFYMKNAYANGFSENKKGSVGHNSKVAGFGIAELILQSLLILYYGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJW5</accession>
    <name>A0ABV2AJW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001707</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000463">
        <property type="protein sequence ID" value="MES1919966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="180"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="182"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="195"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="206"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="220"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="232"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="263"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="324"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="343"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="411"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="420" mass="47302" checksum="B0055D4603FB4D66" modified="2025-10-08" version="1">MKNDEVLENGHASPNEFSKEEKLASFLVSCYQSENLCHSPIVSFQAVLSPNTTMDNFLNEIESQMLVKFATMKNSSIISLFTDEIFIVCDLNSVKIKQIFRIDENNKIKALLRKNNDIKSNIETTKIADKDEILDKILSRLNSENYRELPSAPKCKKLGLSAHIRSIGGHLATKRKVNAFYERTKRDKKDKRSSSKSSSKSSSKVLKKEIAKEKSAEKGKRSKKTSKKKANTHKEEPEKSNDNKLDDSETKTSKKSDILKPKISNKKSNNKTKKSKKRKKKFLSNSKKDLKSPKLAELSSSGSSSESVNEVKMSTVDFKNIAPELKKKILKENGSKREKKFDSQLSLPQKNTIEALKSNKGNREENESSSESEDVSSSSKNSKKNKKKTESFMGEDLDDDSTSSSSSSDEMSIKKKVQDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK50</accession>
    <name>A0ABV2AK50_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001776</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000493">
        <property type="protein sequence ID" value="MES1920051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="298"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="32"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="58"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="115"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="147"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="40175" checksum="BD770E4499297F30" modified="2025-10-08" version="1" fragment="single">NKSAETKSQILKKPINPNSLSPLDIGKSFNHSQTQIKSQQSPKQKPSQSNFKKSSNFDNKKKIKNAENFENFKRNDRKKSPKKSPTFIESTPQGVMNVKKYFSPVIGPNNTAILREPKKNKNENPKIPEKTKFPEKTKFKNRKNKENISPPSQTVKNPNNQNSVKYQKNIQNFITKNSNLVNKNNEQEKLEFESQFENLAKNYETLFGNENLRQNGFLVKTNENLADRNDFFSNLNKRGEKMGAGPSPGEYIAQRQPLKIVQDSPMFELFGDDEKIVGERMVIDYKELFENVRKRYLCPLCLAENVPRDNVVVPCGHFFCADCAPMINEKTICPKCKIKCERVVVLEFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA0</accession>
    <name>A0ABV2AKA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATP-dependent RNA helicase ddx56, variant 2</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">DDX56</name>
        <name evidence="1" type="ORF">MHBO_001813</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000510">
        <property type="protein sequence ID" value="MES1920095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="350" mass="40327" checksum="91062BC88B680D1F" modified="2025-10-08" version="1">MVSVISHLVDSNNKSCKGDAIPFDKNTFICIEGDTDRINKFVYPICRQIATKFDSKSINDFIDAEFVPSVFIITPSTKEAQNLKSNFDNILEKFENSYSIILKTICLNFDDQIDKEKLKNKIIGITTPKQFLSLTNLKILNFDKIDFLAFYDLSSLLFFGHQKDIENICEIHNKKLIFVSNQNYEKCLKFVNKLKKNSEKLSILGEKILKKSENLDVEKLDKNITKNDLKHFFVKFANFSDKFLIIFCLFKLGLATGKALILAKDIFESYKIKIFLNKFSISCQVFNGNLPSDFSDFVYQNFCKGLTNILITTKTQINNYSETKNFKAKVLINFSNAKIDFAKICFNIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL00</accession>
    <name>A0ABV2AL00_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">tRNA synthetases class I (E and Q) anti-codon binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002016</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000615">
        <property type="protein sequence ID" value="MES1920335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="entry name" value="Ribosomal Protein L25, Chain P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050132">
        <property type="entry name" value="Gln/Glu-tRNA_Ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_bL25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_bL25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049437">
        <property type="entry name" value="tRNA-synt_1c_C2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097:SF5">
        <property type="entry name" value="GLUTAMATE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097">
        <property type="entry name" value="GLUTAMINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20974">
        <property type="entry name" value="tRNA-synt_1c_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="Ribosomal protein L25-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA synthetases class I (E and Q) anti-codon binding" evidence="2">
        <location>
            <begin position="22"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13712" checksum="FC8DD255514462C4" modified="2025-10-08" version="1" fragment="single">KSSKVIRATLNLGGNVKTTQKLTWLADSGEDLVPLTLVNLGPLITVPKMTEGDKLKDVTNPNSWKETKAFGDPNLRNLKKGEIIQLQRKGFAIVEKMIKDESKDRLVLIMIPDSKKKAMVNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL24</accession>
    <name>A0ABV2AL24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000636">
        <property type="protein sequence ID" value="MES1920373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15470" checksum="5FAC069EDFDF710A" modified="2025-10-08" version="1">MRCVSNLLRKFHMENDCPLKNKENFKVKITDIKAPSMSKDETNSLEWDKLKTISQPKSSSDAEEQSKLRKSEALKVLNETKKSLLWEEDDSPVLEENFEIQKRKNLEKDVQSEKVEKNSKEKEIVGKNVDSVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL32</accession>
    <name>A0ABV2AL32_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002067</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000644">
        <property type="protein sequence ID" value="MES1920391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11968" checksum="542B838EAA1C2451" modified="2025-10-08" version="1">MSAKTDFDQSFDVIPMKQSIHIQHTCDICNYSTADKSNFNKHMKRDGIADKNNNQPQVSGISLCNVCGKTFKSKFGLSLHIKNKHEKTFRHVCTMCNKGFNQKVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA6</accession>
    <name>A0ABV2ALA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001881</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000540">
        <property type="protein sequence ID" value="MES1920183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10531" checksum="50CBF38F08647811" modified="2025-10-08" version="1">MNDIIPVNSSQIKMYFFVNRVSRKIECRLIKSSVEKLPALKNVYSEDENSKNNILDYMKDKYNYDIGINENLFNSEAYDLYLQNNFSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM1</accession>
    <name>A0ABV2ALM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002202</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000727">
        <property type="protein sequence ID" value="MES1920540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13052" checksum="50D7DF1A70F9B983" modified="2025-10-08" version="1">MDFLNELRFQPLSFSTRDQESVLLRLSLFKSKFEPKTIFNASQTSDPAMPLSVRFAHKMNSNDIFCLSGESGSLRIYKNENVELVEAHDNAVFDVRWLDEDKKILTVIHSIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT6</accession>
    <name>A0ABV2ALT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002293</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000783">
        <property type="protein sequence ID" value="MES1920640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="213"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="305" mass="36432" checksum="0E4EE6260D89CA17" modified="2025-10-08" version="1">MFLKKREIIFVCILIVISFLMAINASFSFFFKFPKLTEKVKIDFILNKSQFKVVSTNYNFEHIQQFSGDDNIFYSKNSLFLDENYFYDIYLDIVTPFSPKPKMSTIATELNVKNGRRVSNLRSKKPISFRKNGLLFRKMAEYLCFPLFPLNFFCFFSKTTNSVLLFEKFRTFDNKKCRLKSIKIDIEDVEMVYNAKIRFETTMSEFVFKKWRLFCVLLMWWLVFFVSIGVLVFSFIFAYFADSGFCAKIARFLNFPFNVVSRESDERVVWNEDIIERKREEFPVEEGSDEHCFNQNLRKRGYSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM67</accession>
    <name>A0ABV2AM67_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002409</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000855">
        <property type="protein sequence ID" value="MES1920771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051334">
        <property type="entry name" value="SRPK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634:SF9">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="29"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="30678" checksum="BD2B68F6681A88F1" modified="2025-10-08" version="1" fragment="single">MENGPEKNDGYCNGIDNCVNKAQILNDRYLLIREIGRGNFGSIWHAHDLEYPEHRNSVAIKIQSAHKNNALLARNEINFLKLIKKRDPLHKENVLRLFGDFCFDCDRGSHFATVTEILGSDLCGVIEDFRTQNSRKKLHRKTVVPIHYIRRFARDILRGLDFLHNKCGVVHTDLKPTNIMVGKQHSGFNKRVKLIDFGNAVFAGSTDNKHFGTSVYRAPESIMEKECGPKADIWALGCIVFEMATGDLLFKANWDESIVYNEDDGFHCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM89</accession>
    <name>A0ABV2AM89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002424</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000864">
        <property type="protein sequence ID" value="MES1920788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="248" mass="29060" checksum="C7DA9898A0376C38" modified="2025-10-08" version="1">MDEDQLSDSSENFAPLVNSRINNIPIDSPLASISTSPENDFEDNDIEKNNIEDNDIENNGIENNEQTLSQETDSVNDEYRHYDDIEWEERDVTQFCPSFRQMNPNSSSDDDKSNNSEDDDNSYNNSEDDHGSDDSYSGMDILDHEDIEEKKEKEERAKEPDFVLSLHEYKPMKEVVEEYEAEQRRKRFSRKKRHAKTESVTILNLIRRAQQHARKSRKWRELGSCCTIRDTRKVGWSRFGTTLRLHSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA0</accession>
    <name>A0ABV2AMA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000859">
        <property type="protein sequence ID" value="MES1920778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="123" mass="13283" checksum="B28D05039E3F3C07" modified="2025-10-08" version="1">MSTVVAKVAPILVALSCDRFASKVVQTMVCSVLGRKNVILFMFVKERGFGASSESRGEPVVFGSESRRDFCVVCDNGRVFCGFDDVFGGNGRGLFLPVVEVEGRSPLFEPLSKDHGGSGFERP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMP6</accession>
    <name>A0ABV2AMP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">TRAFAC class myosin-kinesin ATPase superfamily</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">Myo15</name>
        <name evidence="9" type="ORF">MHBO_005308</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000794">
        <property type="protein sequence ID" value="MES1920663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.720">
        <property type="entry name" value="Myosin VI head, motor domain, U50 subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140:SF706">
        <property type="entry name" value="DILUTE CLASS UNCONVENTIONAL MYOSIN, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140">
        <property type="entry name" value="MYOSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0505">Motor protein</keyword>
    <keyword evidence="3 6" id="KW-0518">Myosin</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myosin motor" evidence="8">
        <location>
            <begin position="1"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="region of interest" description="Actin-binding" evidence="6">
        <location>
            <begin position="111"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="143"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="229"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="255"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="270"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="298"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="330"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="359"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="380" mass="42161" checksum="688E3CC5E17AD76F" modified="2025-10-08" version="1">MPKGTPDILVSNVFSGHGRNKKLKRVKMNKELRKSLLPKEKFNGFLVVHFAEDVVYNCNEFLLKNKDLISDETSAMFASSKSELLSSIFEAGAKRRKGVRKNVGKTFVGSLEKLVATLNDSTQHFIRCMNPNTEKVFSVTEVEPSLGKTPRRAATPLRGHHPGAEGGEEGLSDEDLVRGSGAQLQETCLAPDSGRAEKKRVLESRSRRVRLQLDQLRIRVDQNLLQAGSPLRADDQGAEGESDQRTSAENQIVLRRAAIQQAAGARHGSCSREADDNGTRFEEGRGGSLYPQLGVFPSHRDVPREDPRRTRGEGKSGTREAREGAIGSYRETRERREGKSCFGRRRAQKTRGGNATRRNPPRKRGKRASRTGTCSERRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMQ9</accession>
    <name>A0ABV2AMQ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glycosyl transferase family 25 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002536</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000962">
        <property type="protein sequence ID" value="MES1920928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002654">
        <property type="entry name" value="Glyco_trans_25"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01755">
        <property type="entry name" value="Glyco_transf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycosyl transferase family 25" evidence="1">
        <location>
            <begin position="29"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="18053" checksum="B5F20CDB6861FA65" modified="2025-10-08" version="1">MVLICFLIVQLSKGDFLNTNIVRINDFFDKVYVINLERRTDRLSTINASLRRLNVSFETIKAIDGNSKDLIKQFKQLKKEGKIFSEPGSLGLSLTMLKTIRLAKEKNHRKILWLEDDATFKLDFNFEFDKVIKRIPSNWTVLYLGCTLKNTRGCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY8</accession>
    <name>A0ABV2AMY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Calcium-regulated actin-bundling protein C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002392</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000845">
        <property type="protein sequence ID" value="MES1920753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053356">
        <property type="entry name" value="Calcium-reg_actin-bundling"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040810">
        <property type="entry name" value="F_actin_bund_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37009:SF1">
        <property type="entry name" value="CALCIUM-REGULATED ACTIN-BUNDLING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37009">
        <property type="entry name" value="EF-HAND DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18060">
        <property type="entry name" value="F_actin_bund_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calcium-regulated actin-bundling protein C-terminal" evidence="3">
        <location>
            <begin position="68"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="127"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23296" checksum="AC71B56CF98D9E95" modified="2025-10-08" version="1" fragment="single">SNKKDLFFYFNVDLHKLVNAPQNNNKEEIEKAQKVLEEANQKLSVAIKKAEEAKSAEREQKSTEAEVERACNELKKQEDEYEKTTQKLKFNSNDESKGIVFRNRSKNELQQHLSKDTLGLRSAKIKQEAALRKAKLATEKAQKLREMAEQALKEAEQAFKVAQDFLEEVKNKGGSGQGSVYVIEKKLHEAKRYLPQSKGGISRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE3</accession>
    <name>A0ABV2ANE3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">TATA-box-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002569</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000986">
        <property type="protein sequence ID" value="MES1920969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.10">
        <property type="entry name" value="TATA-Binding Protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000814">
        <property type="entry name" value="TBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012295">
        <property type="entry name" value="TBP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10126">
        <property type="entry name" value="TATA-BOX BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00352">
        <property type="entry name" value="TBP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00686">
        <property type="entry name" value="TIFACTORIID"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55945">
        <property type="entry name" value="TATA-box binding protein-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="138" mass="16104" checksum="F2E46F1033BF897A" modified="2025-10-08" version="1">MRIREPKTTALIFSQGKIVVVGAKTEKSIYFASRLFIRILNKLGYAAKWRPAHFKFRNFVATTDLRFPVKLEALAFEREDFCSYEPEVFPGLIYRMDSPHVVLLVFVSGKIVFCGAKTREQIYRAFEKIFPILVEYQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH1</accession>
    <name>A0ABV2ANH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002771</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001154">
        <property type="protein sequence ID" value="MES1921207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051547">
        <property type="entry name" value="TDP2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15822">
        <property type="entry name" value="TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15822:SF4">
        <property type="entry name" value="TYROSYL-DNA PHOSPHODIESTERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="14131" checksum="54B14BBC7A4FF76A" modified="2025-10-08" version="1">MNKFQNGILAGDTNWNKESLRKYGEICKLDQKWIDCWSIANKNKEKGFTYDGIKNKTATSKFRSRLDRIFANFSEKRIDSISLIGEKPIKNKFFERRKVKTQLFASDHFGIVCELKMRID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ1</accession>
    <name>A0ABV2ANJ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">B-cell receptor-associated protein, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">BCAP31</name>
        <name evidence="4" type="ORF">MHBO_002788</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001171">
        <property type="protein sequence ID" value="MES1921229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040463">
        <property type="entry name" value="BAP29/BAP31_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05529">
        <property type="entry name" value="Bap31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="BAP29/BAP31 transmembrane" evidence="3">
        <location>
            <begin position="5"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="171"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="26460" checksum="F3270DFF07F47852" modified="2025-10-08" version="1">MGLFQIVLILNLFLVLLLIVPFGDNHKQKIIVFLSSTKFFSTAKYFYFIVLVVVVCVFAESFLDARSFRELGPMDAGYLSKTLNCYITGFIIAISLVLFKLLSLIRDAGRLKISDEALKRQAMSASEALNAVMEDQSVLKKENDAMKVVLYGDGKKPVSSSKQNVAAFEEIKKLSEKLVNRNAEITKLEKKLKVVTTEITNLKKDKKLLTGENKNLQTELEDFRIMMDDKSKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP2</accession>
    <name>A0ABV2ANP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001216">
        <property type="protein sequence ID" value="MES1921285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="21168" checksum="7A00C73CE65E7A1B" modified="2025-10-08" version="1" fragment="single">IEKTKMVKNFVTIEFCFGQLLAGKFCERFSQNGVVCFSYKNPVVVTKKRSVLLRKVKMPIRSLSKIDHSMVLNKRRFGQFRTSHQLRYATEEIKKRFSKYDSNFRPNFNPVPRNFEIEERSDYRYRAVSRREESFNFRNESGRIKRIENGQRMIRGIRRKNFDNLFCSKKPRRFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW2</accession>
    <name>A0ABV2ANW2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine-threonine/tyrosine-protein kinase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002898</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001282">
        <property type="protein sequence ID" value="MES1921364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050122">
        <property type="entry name" value="RTK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24416">
        <property type="entry name" value="TYROSINE-PROTEIN KINASE RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24416:SF611">
        <property type="entry name" value="TYROSINE-PROTEIN KINASE TRANSMEMBRANE RECEPTOR ROR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine-threonine/tyrosine-protein kinase catalytic" evidence="1">
        <location>
            <begin position="10"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9905" checksum="D8FEC39815F4EDFF" modified="2025-10-08" version="1">MIKGGYRISKPLDGPIECPEYFYNIMVDCWETNPENRPTFKALHKMLKDYSIHDTEESDEDDIYGMWDNDNVKICDEFDHNPGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF8</accession>
    <name>A0ABV2APF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ESCRT-II subunit protein snf8</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SNF8</name>
        <name evidence="2" type="ORF">MHBO_003087</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SNF8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001481">
        <property type="protein sequence ID" value="MES1921558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016689">
        <property type="entry name" value="ESCRT-2_cplx_Snf8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040608">
        <property type="entry name" value="Snf8/Vps36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12806">
        <property type="entry name" value="EAP30 SUBUNIT OF ELL COMPLEX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12806:SF0">
        <property type="entry name" value="VACUOLAR-SORTING PROTEIN SNF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04157">
        <property type="entry name" value="EAP30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="23825" checksum="0A06C064D6A246FD" modified="2025-10-08" version="1" fragment="single">GGISSLKNRQRQKEAYKKTGLDLSKEQTKHLKEGIKKFEKNLTDFALKYKSKINKNPVFRHQFQEMCNKIGIDPLISNRSLIGKLTGLGNFYVELAVKIINICLKTRNENGGIILISSLLKKIGNNINETDIKKAIEKISKFDKSFRIEKFAGGEFLISVPFEINNDFGQILNSLKSKNGVNFQFLNKDLNWDKNRLFIAIVLNRLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API1</accession>
    <name>A0ABV2API1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002802</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001187">
        <property type="protein sequence ID" value="MES1921247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10917" checksum="D6A731C3F7328194" modified="2025-10-08" version="1">MVTEIKHLQPCVENLPEGLHLCECLVKMEKGVKLMFYNETGNGLSISKRTVVGAINSANFTMKLDVSPSVPEVKRQSQEGWNQPFNLEGLGFTTKHVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ9</accession>
    <name>A0ABV2APQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Myotubularin- protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">MTMR1</name>
        <name evidence="3" type="ORF">MHBO_002980</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001358">
        <property type="protein sequence ID" value="MES1921449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030564">
        <property type="entry name" value="Myotubularin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010569">
        <property type="entry name" value="Myotubularin-like_Pase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10807">
        <property type="entry name" value="MYOTUBULARIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10807:SF128">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-3,5-BISPHOSPHATE 3-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06602">
        <property type="entry name" value="Myotub-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52799">
        <property type="entry name" value="(Phosphotyrosine protein) phosphatases II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51339">
        <property type="entry name" value="PPASE_MYOTUBULARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myotubularin phosphatase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="177"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="389" mass="45816" checksum="0C881B28EE08374A" modified="2025-10-08" version="1" fragment="single">QLSALAQMMLDPFYRTLKGFLILITKEFLSFGHMFGVRNGNASKENANGRSPIFLQFLDATYQLCNQYQFCFEFNSILLEKIAEESFYCKYGTFLYNNEKERKEKKLRYKTVSLWTYILRNPKDYTNVAFTPLKDVILPPKTLRHIVVWPFYYRQHIDSDYRIPLSFVMSLKYESDFLALNNKIKILEKEVDLIKSKNSNLKKQMKTSSAKPNEENALEENFKEITQMLHQKDIPKQNRSESFLRMKNFFESIKHDLKENYTFKSSKGTETKNLEETDYKNLTEKEKAVENHMIGMVKEITNEPDATAKKTFELTLDQIKNGKPSLEDAKVLGKDDNFYDKIQGLKLKHTHTEKSVHEKMREVHRVIKQSKDLKLRHVLPPLHHPPSMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR8</accession>
    <name>A0ABV2APR8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Proteasome subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PSMB2</name>
        <name evidence="5" type="ORF">MHBO_002977</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of the proteasome complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peptidase T1B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001355">
        <property type="protein sequence ID" value="MES1921446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03758">
        <property type="entry name" value="proteasome_beta_type_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035206">
        <property type="entry name" value="Proteasome_beta2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016050">
        <property type="entry name" value="Proteasome_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF2">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA TYPE-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00854">
        <property type="entry name" value="PROTEASOME_BETA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2 4 5" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="21581" checksum="379BF72C4BABC53C" modified="2025-10-08" version="1">MDATFAITGKDFVLFASDSSVRISIKKMKLNQRKTIELDDNKMIAWNGKPSDALNFADFVSRSHFLYTIRNGFPMSVKASAHFIRNELARAVRKSPVETNIMIGGVDESGSSLYYLDYMGSINKLNVAAHGYCAFFVTSILDRSWKEDLEREEALEMAKRCVEELGQRFTLSLDNFEFCFVTKDGAQRIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ08</accession>
    <name>A0ABV2AQ08_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003298</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001742">
        <property type="protein sequence ID" value="MES1921767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="51" mass="5539" checksum="3C3B465B90C67A55" modified="2025-10-08" version="1" fragment="single">MTTSGLGNLETMKGSISVCTCRTIDNQLSDTVDCDKQIECPRPEKPVNTHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ65</accession>
    <name>A0ABV2AQ65_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glycine--tRNA ligase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001786">
        <property type="protein sequence ID" value="MES1921800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027031">
        <property type="entry name" value="Gly-tRNA_synthase/POLG2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10745:SF0">
        <property type="entry name" value="GLYCINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10745">
        <property type="entry name" value="GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="97" mass="11342" checksum="609C8A8A70BCC24D" modified="2025-10-08" version="1">MAYPKNVGKAVERLTAKHFLYLPSASIYGGVSGLYDYGPLGCKLKTNIINYWRNFFVLEENIFEIETMTLTPEIVLKFCKFFCNFLQFFLNKDFWAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ78</accession>
    <name>A0ABV2AQ78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003374</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001839">
        <property type="protein sequence ID" value="MES1921837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="11"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="7121" checksum="D99E2F0ECC1A5CFB" modified="2025-10-08" version="1">MGKSKKKGKKGNNFYKQQNKKPTTVKTEAVASNDEAFEREIETEKIKIVDCLLSRGIKHVPSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA7</accession>
    <name>A0ABV2AQA7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phage head morphogenesis domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001858">
        <property type="protein sequence ID" value="MES1921855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006528">
        <property type="entry name" value="Phage_head_morphogenesis_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04233">
        <property type="entry name" value="Phage_Mu_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phage head morphogenesis" evidence="2">
        <location>
            <begin position="9"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="15713" checksum="0C1193CCF5AB9620" modified="2025-10-08" version="1" fragment="single">KSLNNNANNSLRIAATETHRVTNQARQDSYEHAEDKGLNFLKVWVASLDERTRSSHRALDGKKVKPNENFTSPVTGASGPGPGMMGTAADDINCRCRTITEFEGYETEQAFRRARGVDGKNKVIKYKTYEEWYDNRVGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU0</accession>
    <name>A0ABV2AQU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002064">
        <property type="protein sequence ID" value="MES1922002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50889">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="14"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="19489" checksum="DD2866DF8DAC6937" modified="2025-10-08" version="1">MQKIPQKMPQRKTSGKEENKQKERKPIVWDEPGEGSRYMLMEGLEMVVPYFYEFKSFAKRRWFGRTVEDVFEAEFFNFRKENFDKQIENKEIRINDRIVEGNYKFKDNDRLSHRLHYHENPVLTSDVKIIKENDDYFAVVKPCLYDFLLDSRLINFLNLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU5</accession>
    <name>A0ABV2AQU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA-binding protein 25</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RBM25</name>
        <name evidence="3" type="ORF">MHBO_003557</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002129">
        <property type="protein sequence ID" value="MES1922040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052768">
        <property type="entry name" value="RBM25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18806">
        <property type="entry name" value="RBM25 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18806:SF4">
        <property type="entry name" value="RNA-BINDING PROTEIN 25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="2">
        <location>
            <begin position="27"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21769" checksum="71B463CA28083AFD" modified="2025-10-08" version="1" fragment="single">MAFKNINLTQDKNNFFKGQQSKGVVNITIFIGNLPDQLKDHQFERILRMCGPIRKWKRAYEKANFGFVDFGDAFIALRTIRVLSTLSKASKYTNLVIKADDKVRMGLRQLEKNNKLEAARTGRRDDITQFLDKEAFRKAVTELANWSAQFTGIETKNEYDKILSLIKNEKIEIACHANNDFTSDLLLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW6</accession>
    <name>A0ABV2AQW6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alkyl transferase</fullName>
            <ecNumber evidence="3">2.5.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003587</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the UPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.-" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010002173">
        <property type="protein sequence ID" value="MES1922068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00475">
        <property type="entry name" value="Cis_IPPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="entry name" value="Decaprenyl diphosphate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001441">
        <property type="entry name" value="UPP_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018520">
        <property type="entry name" value="UPP_synth-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00055">
        <property type="entry name" value="uppS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291:SF43">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE COMPLEX SUBUNIT DHDDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01255">
        <property type="entry name" value="Prenyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="Undecaprenyl diphosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01066">
        <property type="entry name" value="UPP_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="266" mass="31046" checksum="2FC34A90D6FEF4B9" modified="2025-10-08" version="1">MIRSNFRNKSTGTNYLPRPIHIMSFFAFVLRSLFRLSVLPRHVAFIMDGNRRFASKHGKKIDDGHTGGYKKLIEIVMLSQLLGIEEITVFAFSTDNFRRAKSQRTSFFRLMEDKFRKMESLSRENRLSCKVRFVGDLETLPFTLRKSMTDLTEETRKNKGVSLNICFSYSSDSEATSATLSIRENFVNKRVAIDQIADEALREKISEQFSIKPDLMVRTSGENRISDFLLWHCHAKTQIFFEKKMWPAFSMLDYIKILLQYGEMNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY0</accession>
    <name>A0ABV2AQY0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UBA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002193">
        <property type="protein sequence ID" value="MES1922082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019103">
        <property type="entry name" value="Peptidase_aspartic_DDI1-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15397:SF3">
        <property type="entry name" value="DNA DAMAGE INDUCIBLE 1 HOMOLOG 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15397">
        <property type="entry name" value="SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09668">
        <property type="entry name" value="Asp_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00627">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00165">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBA" evidence="1">
        <location>
            <begin position="91"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="14735" checksum="24F05499D487837F" modified="2025-10-08" version="1">MAAKTGLLRIVDRNFGGLAKGVGVARILGRIHITTVKIGNCVLPCSISVIDSDGVDFLLGLDMLKRHLIEIDLRKKVLRIGNEEIGFVPKEQNEDRSEILRSVERMGFSREKAEHALETTGWDIDAAIQLLTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY3</accession>
    <name>A0ABV2AQY3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003599</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002192">
        <property type="protein sequence ID" value="MES1922081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05117">
        <property type="entry name" value="STKc_CAMK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24347">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="1 3 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="5">
        <location>
            <begin position="15"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="31292" checksum="7A55CD82EB0DB781" modified="2025-10-08" version="1" fragment="single">MLKIASEFKNFYSLYTLKDVLGTGRFSSVHSCKKNTTNRDYAVKIIDRTDMTERELESLRLELSIIKLLHHPNVTQICDVFEEKNSTYIVMRLFTGGDLFERVKSKGVLEEKKAKAVMWRIFDAVRYIHSLGIAHRDLKPENILLREENDDEQVAVCDFGLSDFLGPDSFLNLPCGTLSYVAPEVLIGEGYGKEIDLWSLGVIMYVVLRGALPFSGKDRKTIMNRIKTQKLTFSSEKWATISSEAKDLITKLLQIKPENRINITDAMNHSWFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR68</accession>
    <name>A0ABV2AR68_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">60S acidic ribosomal protein P2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003484</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein P1/P2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001992">
        <property type="protein sequence ID" value="MES1921959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05833">
        <property type="entry name" value="Ribosomal_P2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01478">
        <property type="entry name" value="Ribosomal_L12_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038716">
        <property type="entry name" value="P1/P2_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027534">
        <property type="entry name" value="Ribosomal_P1/P2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044076">
        <property type="entry name" value="Ribosomal_P2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21141">
        <property type="entry name" value="60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21141:SF5">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN P2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00428">
        <property type="entry name" value="Ribosomal_60s"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="69"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="84"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="101"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="110" mass="11890" checksum="74B5C703B3299358" modified="2025-10-08" version="1">MKYLSAYLLSYINGNNNPGKDDIEKILKSVGIEPEAEKIALLLKSVEGKNLSEIIRAGLGKLGTASVAGGATAAAGDSKQKEEEKEEEKEESDNYGGMDLFDNEEYSDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC7</accession>
    <name>A0ABV2ARC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003741</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002437">
        <property type="protein sequence ID" value="MES1922232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="263"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="265"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="278"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="36556" checksum="4F7F34AC57F6A0E8" modified="2025-10-08" version="1" fragment="single">NHLSDCTENYQTEMPLPISQTTCGFPKNILKDLELIENFVFFENDKLFLDKIGFCKNKNCFEHKGWQFLFVKEFDFCLAKLTRKMRKIKNYLKLKIRVKRDLKIINLDSMISKNSKIAKFDKIGEKKKSILIKIENSLKSSQLFNHLLNQLNLIKTNEKSKKEQNNKKRIFNSENLTKFPKLTKISNFLPRYEPNAFLRNSVCLPPPVFREKDKKLKTTERSKINIQQTNNSYKKRKKSNLTKFYQQKNVFSSIMIKPPKIFSQKNKKQPKIVHKKSQNCQQTLPKINQKTNPPKKQNLNEQNFAKSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS8</accession>
    <name>A0ABV2ARS8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003871</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002668">
        <property type="protein sequence ID" value="MES1922366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12362" checksum="519AE82D6A5AAF37" modified="2025-10-08" version="1" fragment="single">SNDNRSMVQSQTHVFFPSQSKSGLPMVQFKNKFTKRRHLNLFEEYSTSINYTCRMLHEIKSYVFCGFEVLKNMISSGHKNYGSCNEKCILSSVSTTKTSLMLSKSVSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW0</accession>
    <name>A0ABV2ARW0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carrier protein, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">MTM1_2</name>
        <name evidence="3" type="ORF">MHBO_003617</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002215">
        <property type="protein sequence ID" value="MES1922102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030564">
        <property type="entry name" value="Myotubularin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010569">
        <property type="entry name" value="Myotubularin-like_Pase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10807">
        <property type="entry name" value="MYOTUBULARIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10807:SF128">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-3,5-BISPHOSPHATE 3-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06602">
        <property type="entry name" value="Myotub-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52799">
        <property type="entry name" value="(Phosphotyrosine protein) phosphatases II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51339">
        <property type="entry name" value="PPASE_MYOTUBULARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myotubularin phosphatase" evidence="2">
        <location>
            <begin position="123"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="320" mass="36882" checksum="68B5F7EBA3F7AAB8" modified="2025-10-08" version="1" fragment="single">EMGQWGKLLLTNFRLIFLPIKADEKISRSSFNTNYFDLNHRKFKIFSEFPIFSISKILCNKNNNSTNYVLTLKDCRSTKFVMNGDEKEIDNFNNELFRYAFPGEESATFAFCYKEAYSKMNEGWDLYKEEEEFRRMGLSSEWRVSNANKKFSLCDTYPQIIIVPAELNSKEIITIAKKRSKNRLPVLTYFYAPTGCAIIRSSQPSNGIFGQSMSLSKNYHIRFIFDARPRINAVANVASGGGFETLGDHKIRFCGIPNIHAMRESLNKFLNINQKTIQNYVSNESELDWGDIIKSSNWLSHIYLLLDCSRDIAELISKGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY3</accession>
    <name>A0ABV2ARY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003943</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002784">
        <property type="protein sequence ID" value="MES1922430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7349" checksum="CE641189A4043581" modified="2025-10-08" version="1" fragment="single">ELKQTNILEIDKDLLDIKNKILKAHQENKEFKSDLKMDLIGSFLLGSIIFDNKLGVDIAVYTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS03</accession>
    <name>A0ABV2AS03_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Dynamin-like GTPase that mediates homotypic ER fusion</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">SEY1_1</name>
        <name evidence="12" type="ORF">MHBO_003965</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Probable GTP-binding protein involved in generating and maintaining the structure of the tubular endoplasmic reticulum network.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3 GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002853">
        <property type="protein sequence ID" value="MES1922450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030386">
        <property type="entry name" value="G_GB1_RHD3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030383">
        <property type="entry name" value="G_VLIG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008803">
        <property type="entry name" value="RHD3/Sey1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45923">
        <property type="entry name" value="PROTEIN SEY1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45923:SF2">
        <property type="entry name" value="PROTEIN SEY1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05879">
        <property type="entry name" value="RHD3_GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51715">
        <property type="entry name" value="G_GB1_RHD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51717">
        <property type="entry name" value="G_VLIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="GB1/RHD3-type G" evidence="10">
        <location>
            <begin position="35"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="VLIG-type G" evidence="11">
        <location>
            <begin position="35"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1922450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15309" checksum="8321BF0BF54D22A2" modified="2025-10-08" version="1">MATYPYFNLIDEHGKITKRKEDFERFLKESNAFSEENFFVVSVMGGQSGGKSTLLNILFETEFPVLQMGQRKATTKGVMISFARNLEKNLIVLDLEGSDSTEKTESESETFSRKSALFALAVSEILIVNIWSHDVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS39</accession>
    <name>A0ABV2AS39_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine/threonine-protein phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PPP1CA</name>
        <name evidence="3" type="ORF">MHBO_004009</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPP phosphatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002949">
        <property type="protein sequence ID" value="MES1922491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050341">
        <property type="entry name" value="PP1_catalytic_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668:SF496">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00125">
        <property type="entry name" value="SER_THR_PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="2">
        <location>
            <begin position="127"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="29607" checksum="60063EF4A7ADA342" modified="2025-10-08" version="1" fragment="single">MPLNPNEKRASAILQKLLSAKDLDLDNRRVILRENLTEDDLFFLTEKSEKLFMAEPTLLELASPLKIVGDVHGQFEDVLRMFKSQGFPPEHNYLFLGDYVDRGVQSIETISILLALKIRYPNNFFLIRGNHESSSISRYYGFKKECCERFDVRVWRTFVECFNCLPICALIERKIFCTFIFFAFKLQKLQIYISVKNIFVIAFKLQKLQIYISVKNIFVIAFKLQKLQIYISVKNIFVIAFKLQKLQIYISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS64</accession>
    <name>A0ABV2AS64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003897</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002711">
        <property type="protein sequence ID" value="MES1922389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13664" checksum="C62CDE23F44D1C53" modified="2025-10-08" version="1" fragment="single">EKYYDIIRRVLRPYLSNGSNRVERSNPGIISRKNFINKLFEGKIDGWSIEIDPQCKNLIGDYEYIKEDINGKKEKKVVKDPSTGESYQERGHTSDASDYLIIKVLKNLYTRYIRSNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD3</accession>
    <name>A0ABV2ASD3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002568">
        <property type="protein sequence ID" value="MES1922313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16084" checksum="E827783E4B2B6B0A" modified="2025-10-08" version="1">MQEMQAQAEKGKTFWEEGISDAIPEKLEFGEFNYSVKDVEGYKKSLGTIENFLNRYKDDNGLLDQKRLARTIVAGEQVLNNDLLAAHGKHVQAAVIEEQMKKKANTGDQETTKNTDPDKVETARQNFLDSIKKHSGSLGIRNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH6</accession>
    <name>A0ABV2ASH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003242">
        <property type="protein sequence ID" value="MES1922618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20447" checksum="3133EB38158ADDD5" modified="2025-10-08" version="1">MAIKQTFLQYTLSNSNFTILLNFMSDGLPEIKQAGFVEPKSIIRPWLKFDWLKGKMRRSSLDEKRDIKAEMDKTKIILARLMVELDAQWPLELKEVENSYFYNNEKQNLIDFSRETFYLTLNDGKERKTICFKSESDHSDFIKKLKTKFCDNVKKVNGSLSSDYVENVYKEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ4</accession>
    <name>A0ABV2ASJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MutS protein msh4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MSH4_2</name>
        <name evidence="2" type="ORF">MHBO_004160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003311">
        <property type="protein sequence ID" value="MES1922641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05192">
        <property type="entry name" value="MutS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="DNA repair protein MutS, domain III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair protein MutS core" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7208" checksum="B2E4F5E0999BC965" modified="2025-10-08" version="1" fragment="single">MNKCKTRMGARLLRANLFQPLNDLRTLEARLEAVESLATEESLLSQIGEKTGELCDFDRIIATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT38</accession>
    <name>A0ABV2AT38_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ADF-H domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004359</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the actin-binding proteins ADF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003840">
        <property type="protein sequence ID" value="MES1922831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002108">
        <property type="entry name" value="ADF-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017904">
        <property type="entry name" value="ADF/Cofilin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11913">
        <property type="entry name" value="COFILIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00241">
        <property type="entry name" value="Cofilin_ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55753">
        <property type="entry name" value="Actin depolymerizing proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51263">
        <property type="entry name" value="ADF_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADF-H" evidence="3">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="10432" checksum="F761B4932366A499" modified="2025-10-08" version="1">MDQSSNSSALEAFKKIKSNVHGSLRYLIYKIESPNKLIVSLKGDKSSRYRDLIDVLPNTESRFVVYDYRYISHDNRKCDKLYLIHWFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA0</accession>
    <name>A0ABV2ATA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004234</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003488">
        <property type="protein sequence ID" value="MES1922709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="30068" checksum="6889EBC76D35AA93" modified="2025-10-08" version="1" fragment="single">FLRRGTRTVPIRQSIPIPTENTLFTKFEQFYEKFKWSLLRFFCQNCYKWKDGRIDKLSLSGNHNETVRTIHRIIFLSLFSKLKEKSDFLFSMKKVNFENSEKWVELHREINVLLSFVVCCFQEIDFAAHCELLFGWRELSDFAVILFSFVLKYKSIQPRTLQIAIICFKHFVEVVSVGEMNRLLFNDEKDKNIPKFLLEQIGNLTIQRSNKMNDQIRLFDFGKFWRDSAIEIDKIESSCNDILKNYEKSLLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI8</accession>
    <name>A0ABV2ATI8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Pre-mRNA-splicing factor cwc22</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CWC22</name>
        <name evidence="7" type="ORF">MHBO_004225</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003468">
        <property type="protein sequence ID" value="MES1922702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050781">
        <property type="entry name" value="CWC22_splicing_factor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003891">
        <property type="entry name" value="Initiation_fac_eIF4g_MI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18034">
        <property type="entry name" value="CELL CYCLE CONTROL PROTEIN CWF22-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18034:SF3">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02847">
        <property type="entry name" value="MA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51366">
        <property type="entry name" value="MI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MI" evidence="6">
        <location>
            <begin position="1"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="169"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="183"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="210"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="24892" checksum="CA434035FC52AE1A" modified="2025-10-08" version="1" fragment="single">HLVASMILDCCANERAYQRDIGLIGERLCKLLPSYVDAFDDLFGRQYTVIHRYETTKLRNMAKFFGHLIVSEALPWDILEYIKLTETETTSSSRIFIKVIFQEFAYWMGVKALKSKIEEEELKEALSGIFPKDSPKETRFAINFFTTIGLGALTAQMREHLEDLQKKIKERRMKETDSDSSDSDSSSSGSDSDSSESSSGDDNTSSGEETSNSGDQESSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ8</accession>
    <name>A0ABV2ATQ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">26S proteasome regulatory subunit rpn6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RPN6</name>
        <name evidence="2" type="ORF">MHBO_004579</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004463">
        <property type="protein sequence ID" value="MES1923044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050871">
        <property type="entry name" value="26S_Proteasome/COP9_Components"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000717">
        <property type="entry name" value="PCI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10678">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01399">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00088">
        <property type="entry name" value="PINT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50250">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCI" evidence="1">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19769" checksum="CC18B54A85E11201" modified="2025-10-08" version="1">MKPLKYMLLSKMLSGKANEIANLLKGRSIKQYQGEELDSMLQVSRAYEESSLETLRKVLQKYRTFLEDDKIIARNLKSVSDTLLEQNIRRIIEPYSCIEISFIAGKLQMDQYILEKTLTKLILDKKILGVIDQSKGHLILFKQKTLSPVYEDALAAIEQLTMIVTKLSQNID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU83</accession>
    <name>A0ABV2AU83_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004761</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005131">
        <property type="protein sequence ID" value="MES1923217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6889" checksum="2EC4344B5DB0495F" modified="2025-10-08" version="1" fragment="single">TTKSIVSIMVLESENNFYKRMVRQVPVFDQSTKLYCDAFEMNFKATVVAKKMNKLFCSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU92</accession>
    <name>A0ABV2AU92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004764</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005151">
        <property type="protein sequence ID" value="MES1923220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="11941" checksum="56798EAD8BAF6442" modified="2025-10-08" version="1" fragment="single">ELALNPQGKVAILEVPISKLHQEIHDRILHMIENWVANGECRDEIAKTESAMIEEFEKMQKQLTDIEENLMNAVGSGNSTSGSSVGKVVGIVAAAPLWIPLVLLGAVLALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI0</accession>
    <name>A0ABV2AUI0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004863</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005581">
        <property type="protein sequence ID" value="MES1923308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13125" checksum="F67AA27A7BCDBABF" modified="2025-10-08" version="1">MRSHLAESVVKLRRKTACLHYLAKSYEMINTRTLLTLTKSHCLAAIDYAAEILIGSSPHNLKKTRSGRTQSFNKRNWSRQNMRKKRVSNTNFIYEPKEEMGSENTQIPCKTCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM9</accession>
    <name>A0ABV2AUM9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Histone H2A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004632</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004630">
        <property type="protein sequence ID" value="MES1923093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="107" mass="11490" checksum="56CB169C6FD5778A" modified="2025-10-08" version="1" fragment="single">SEAQTLDRADIYEAGKKAYRKVSRGVRKTVRFTNDLIYTGVVHTVRGGGHLASTLGPAFSCALVTFLVEFVQSEDSESAATSAKNCLILMKFVRSEDAASAATSARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT6</accession>
    <name>A0ABV2AUT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004744</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005068">
        <property type="protein sequence ID" value="MES1923201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8361" checksum="585568972F6D143F" modified="2025-10-08" version="1">MSSKMQFVPDFPKDLKAYNSKLSLETAYQRILSVGLANGDIGCIQPEELADSLLQSAKKKFVLRAYDGFEPSGRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV63</accession>
    <name>A0ABV2AV63_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Calponin-homology (CH) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004836</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005450">
        <property type="protein sequence ID" value="MES1923287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.10">
        <property type="entry name" value="Calponin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036872">
        <property type="entry name" value="CH_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47576">
        <property type="entry name" value="Calponin-homology domain, CH-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="124"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="156" mass="18753" checksum="0BA515B03308C4DD" modified="2025-10-08" version="1">MFEYFEISKKRAKTNRIFIKWINSQIKDHGIKITSLKRFIQTKAMMALVDSQRKGCYPFENISLTKESFDDCLNFAEKEFGVPKFVDYDFLWKTNDHSVLMIYLNNFLSCKNDSDENSQSRNLTRKDKLVDESNNKKRKDDKKKRRTAIRQKRKRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV97</accession>
    <name>A0ABV2AV97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005174</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006974">
        <property type="protein sequence ID" value="MES1923578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11971" checksum="6F504A0F74D94E16" modified="2025-10-08" version="1">MPFKNPFTVNPYSLNSLENKNENIPTNSEALREHLRSERALEAVQLAKSLEMSYRFNIAHAESAKPNYIRNAIKNDQIKDHKILAFWTISSSTSSIELLTKHAKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVP5</accession>
    <name>A0ABV2AVP5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">26S proteasome regulatory subunit RPN11 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004992</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006138">
        <property type="protein sequence ID" value="MES1923423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056263">
        <property type="entry name" value="RPN11_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23594">
        <property type="entry name" value="RPN11_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="26S proteasome regulatory subunit RPN11 C-terminal" evidence="6">
        <location>
            <begin position="9"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF23594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="5951" checksum="C4887B7CD3C7149C" modified="2025-10-08" version="1">MNAQLDERKSKENFDIRKVGLVDAKAHLQTLASEIIESNVSQTISSIYGLKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW05</accession>
    <name>A0ABV2AW05_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_005135</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006813">
        <property type="protein sequence ID" value="MES1923546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379:SF121">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379">
        <property type="entry name" value="KRAB AND ZINC FINGER DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="26"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="54"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="82"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15618" checksum="976E8EDF29ABEA80" modified="2025-10-08" version="1">MKSVSIKKQAYSDYHSNIDSNGKSKIKCWLCQIYFMTQRELLDHANKHKGENIFKCALCLEGFNSKMLLDQHEKKHMGTTTVMCRLCNKMFFDKGSFVLHMSTHGERKQKWNGQIGGTLSFRDMLNIRPPKKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWC8</accession>
    <name>A0ABV2AWC8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006885">
        <property type="protein sequence ID" value="MES1923558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="16888" checksum="5E3295CA06B894BF" modified="2025-10-08" version="1" fragment="single">SPVEAATDPKTGKINPQSVADSIQNDIKATAEAIAESKMTGKSAMPDKSTAESRSIEINDIRPNVADDAPLHISMDNLQGQYRPDSFEMAKDVENKISSEIQSEYAEILEKTQKDIDDHNAKSLHRRILEDNPLVTAPESMRPEMIQEIIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEV0</accession>
    <name>A0ABV2AEV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphoinositide phospholipase C</fullName>
            <ecNumber evidence="1">3.1.4.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PLCL2</name>
        <name evidence="3" type="ORF">MHBO_000226</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-4,5-bisphosphate) + H2O = 1D-myo-inositol 1,4,5-trisphosphate + a 1,2-diacyl-sn-glycerol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:33179"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17815"/>
            <dbReference type="ChEBI" id="CHEBI:58456"/>
            <dbReference type="ChEBI" id="CHEBI:203600"/>
            <dbReference type="EC" id="3.1.4.11"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.11" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001192">
        <property type="entry name" value="PI-PLC_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000909">
        <property type="entry name" value="PLipase_C_PInositol-sp_X_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001711">
        <property type="entry name" value="PLipase_C_Pinositol-sp_Y"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10336">
        <property type="entry name" value="PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00388">
        <property type="entry name" value="PI-PLC-X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00387">
        <property type="entry name" value="PI-PLC-Y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00390">
        <property type="entry name" value="PHPHLIPASEC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00149">
        <property type="entry name" value="PLCYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50007">
        <property type="entry name" value="PIPLC_X_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50008">
        <property type="entry name" value="PIPLC_Y_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PI-PLC Y-box" evidence="2">
        <location>
            <begin position="62"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU361133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="23852" checksum="7E552C73CCE274A0" modified="2025-10-08" version="1">MADVLLSAFGDKIFSAEDFEKLSEFPSPNFLKEKILIKSKINEDEHVLSKQSKLGKLCCLVPAHFSGYEEENYRLNQVISMPFSKFKKVSENNIDLMRKLTRRNLVRVYPDGQNINSGNFNPAFVWANGAQIAALNYQTAGKFMGLNQGNFFVNGFCGYVIKSAILLNDQKPTEKIRSLNMEIISAAYLPKIETEIVDPYVVVELFGLNHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEY7</accession>
    <name>A0ABV2AEY7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000216</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000028">
        <property type="protein sequence ID" value="MES1918212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050236">
        <property type="entry name" value="Ser_Thr_kinase_AGC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24356">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="1"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="19962" checksum="4D0149B37A9409C8" modified="2025-10-08" version="1">MIIEGLEYLHSLGYVHYDLKPDNILITNDDIVRIADFEFSRSPGDNLNHIQMTDIIIPPELVSGSKVGYYFDSWALGCVLVFVCTRDYLSYDVSYNEILNTSAKTLLKHFDENVTDQEYKTAFRKILEEKLLVHDIEKRLWGKELPNAAEDPDLIKCFDLRQSCGSEVVQICY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF19</accession>
    <name>A0ABV2AF19_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000278</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="19032" checksum="CCDD9DC7DB233B11" modified="2025-10-08" version="1">MEDFETTLNSLENILLKMPSKKGFVIQEQIISKIVKNICTLEKSEKRDRLVQKFGSLIKPIANNNCEQKESNPLIYKHLSDFENMCGHKNESIEFKRKELRSLKTGKWDKSKEKLEKVAIATISLYEMSGNPDERQLILMNIGTLKKKFQDLRMDDRILEVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF56</accession>
    <name>A0ABV2AF56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000301</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000041">
        <property type="protein sequence ID" value="MES1918318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="28048" checksum="BACAB47B011B3179" modified="2025-10-08" version="1">MLFLQLCFNCFLKSRHFSVSLIKEALSKTEFDDFRMQLDRAFLEMGYNGPRVFQLYDFRFYKDDSQDLELLKKLPLLIMRYKFIKKDQTNLNVMLFLSDLAKSMLNHSEDQIIESINNSDNNKETMPFLWRCFSPSSWDVLLQLEQLSCGGVTPLDGFQLKISLLTKDGTEIPCCASVRYKMNKDKIFESVEYYMVPIISQENLFNILNEKTPIGDSCDNALSILESDSNNDFDKFLNFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF7</accession>
    <name>A0ABV2AFF7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">subtilisin</fullName>
            <ecNumber evidence="6">3.4.21.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000388</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.</text>
            <dbReference type="EC" id="3.4.21.62"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase S8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.62" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051048">
        <property type="entry name" value="Peptidase_S8/S53_subtilisin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43399:SF4">
        <property type="entry name" value="CELL WALL-ASSOCIATED PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43399">
        <property type="entry name" value="SUBTILISIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase S8/S53" evidence="8">
        <location>
            <begin position="4"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="19149" checksum="40652E3F287F36E1" modified="2025-10-08" version="1">MGCTIISAAGNEGSSDWGEVIYSYPAGFDNVLSVASIYYKIKSGSISFAETYYSNRNSMVDACSIGQEVLSTTPGNLYGINSGTSMACPHVSGYAALLHEKINKMWRGKKRNNSCNLFSMVKASTVPINTNKLNGQTGLINNITGAGMVTAFPKLPTRKKFRYGCFYIEDMDPVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG8</accession>
    <name>A0ABV2AFG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Structural maintenance of chromosomes protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SMC3_1</name>
        <name evidence="3" type="ORF">MHBO_000363</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000053">
        <property type="protein sequence ID" value="MES1918392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1060.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010935">
        <property type="entry name" value="SMC_hinge"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036277">
        <property type="entry name" value="SMC_hinge_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43977">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06470">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00968">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75553">
        <property type="entry name" value="Smc hinge domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC hinge" evidence="2">
        <location>
            <begin position="367"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="519"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="595"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="595" mass="67953" checksum="E15FC335E71824FA" modified="2025-10-08" version="1" fragment="single">MNDAQRLSLFKQIAGTSVYEAKRGESVRLMQDTARKNAQIEQIVRGIRARLSELEGEKSELLDFQRKDGARRTIERSVYLREKEKCAARLEVASRKRRSAEVNLAESVCEAEAAEKGRKEARDELGRLGAAGEGLSQKIKRNGALRRRQSASLVRLEARRDWAKEVVSKSEKRLAALGEFLESMERRIDAGAEKSREMERFVEKLEDEKTALAKELGPKKQKLEFLQAKCGRKDMFSTKSERDEFLLRQVSSKKLLIENDIARKAYLSNQLDKIDSNRIAKKGETIENEIKHLQSAIEKDDAKYVKDLNSRNKFSLQRKKIWKELDKVNSETLTVRNVLSRAESSLRYSMAKGQYDSIRKIKESTSEGYRGCLSELFTLKHPKFAKCVEKTAGSRLFFHVVDDDEIAARLIATINRQKLGRTTVMPLNRLNAPKELKIAEEDKQDVIPMLKQIDFEEKFRPAMAQIFGKTVIARSIDIASAYSIKHNVDAITLDGDRASKRGYLSGGYNEGKTSRLEAIAAIKKNSDELETLLKKANNLEKDKNTVEISLERLTASLNLLESEKEQRQRQLRAAKEALFYCKKELQNAEKDELRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK1</accession>
    <name>A0ABV2AFK1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphoenolpyruvate carboxykinase GTP-utilising N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000403</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000062">
        <property type="protein sequence ID" value="MES1918433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.449.10">
        <property type="entry name" value="Phosphoenolpyruvate Carboxykinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008209">
        <property type="entry name" value="PEP_carboxykinase_GTP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035078">
        <property type="entry name" value="PEP_carboxykinase_GTP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008210">
        <property type="entry name" value="PEP_carboxykinase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11561">
        <property type="entry name" value="PHOSPHOENOLPYRUVATE CARBOXYKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11561:SF0">
        <property type="entry name" value="PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP]-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17297">
        <property type="entry name" value="PEPCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68923">
        <property type="entry name" value="PEP carboxykinase N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phosphoenolpyruvate carboxykinase GTP-utilising N-terminal" evidence="1">
        <location>
            <begin position="57"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15082" checksum="348C0FE140763C44" modified="2025-10-08" version="1">MIRLKQFYKNYQIRRLNATFNIAAKPVLRTTSARTYLEWSNNTHILDSWTSNAELKDWIIQQISHMQPSRVHLCDGSIQEYQEIIRLLTAQGTLIKLNEKRLPNSYLARSDKNDGELYYLTKFRTFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP4</accession>
    <name>A0ABV2AFP4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP synthase protein MI25</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000479</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="118"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="150" mass="17662" checksum="8F50FD011F4849D6" modified="2025-10-08" version="1">MLSYRKISRSPFLKRTKFCLFFSETPKSDFAQNGKKTIFENIKIEQTQKPYAFWAIKDNLNNLSKESFLNGTLMSLSGFVLIYYLLHSDEKENFKLMSDAELSVCKARKDELSALEKLHKIQLMNYELLEEIEKLNKNFIEKSNKLKETN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG23</accession>
    <name>A0ABV2AG23_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ZP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000373</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000057">
        <property type="protein sequence ID" value="MES1918404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045650384" description="ZP domain-containing protein" evidence="1">
        <location>
            <begin position="20"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="301" mass="34791" checksum="DD2BF734C3D907E3" modified="2025-10-08" version="1">MVYLKILLFSFLTIINSKAVLHNEQVLSSKPKCSKDNLVSIQRISILNQRKFIVQNMECKDPSCNLDKVEYFVLERKTELIYPANFTVAGTAVNNKNKSKIRSFVVQISRDLRMSDMKRIEFYYGNTTSCYIDITSNEERLIKRIDPAECKQFCEGNEKEILFVYDLSSNNCESGYEGKLRVINENTLELNGFKPRQLNSIGTIAFVASLKVKGEIVDVNLYDENCNIKEVDENLPIQNKQNIRLILRNPFKVHQMIDFGIEEHSYKMKAAKKRICRDRIKPISAEMVKNHEVTTDSSCFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG56</accession>
    <name>A0ABV2AG56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribosome-recycling factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RRF1</name>
        <name evidence="4" type="ORF">MHBO_000590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RRF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000101">
        <property type="protein sequence ID" value="MES1918656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.20">
        <property type="entry name" value="Ribosome-recycling factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002661">
        <property type="entry name" value="Ribosome_recyc_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023584">
        <property type="entry name" value="Ribosome_recyc_fac_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036191">
        <property type="entry name" value="RRF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20982:SF3">
        <property type="entry name" value="MITOCHONDRIAL RIBOSOME RECYCLING FACTOR PSEUDO 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20982">
        <property type="entry name" value="RIBOSOME RECYCLING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01765">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55194">
        <property type="entry name" value="Ribosome recycling factor, RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ribosome recycling factor" evidence="3">
        <location>
            <begin position="20"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="19069" checksum="46FC94102F0086B5" modified="2025-10-08" version="1">MKKFEMKKDVFFSQSNYVKTMLGNLKIDIDKNNKLALSDIAIVSTKGINYLNIDVVDIKLKKHIRSKILSTGYNLNPIEKSETSFEIKIPKLDKTGNKNLAKEVKTIRSNFKEIQNHQNRILKKQMNLLQKDLFVRTKNSLNQLFAQNKKKIDEVLKKSSKEEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG78</accession>
    <name>A0ABV2AG78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000032">
        <property type="protein sequence ID" value="MES1918247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="29460" checksum="EB1DCFB91E9CCD0E" modified="2025-10-08" version="1">MIFRFQRKNIKLYLRHTCDPGASSRCSAPGKIEVMKIPYESSNWCDSHKEITIPPPTAEIEWFNFEDCEFDDIGFESPSSTRYEITVAGNKKLHIKNVLLNSFDILTNCNDQSDAKTIEMFSEGKNTIAGTQANFKIIPKPRRMCTKNGMVVPTGPNSVVIQMDFPKNIFDPQKSCKFEVRALMDISYKDENKNFSEKQIFTNEKQLFENPSVFKEDGVAVPNKMNVMKAGTVTKMKLDSESLQSLPKTIFTILAIILM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG90</accession>
    <name>A0ABV2AG90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000632</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000110">
        <property type="protein sequence ID" value="MES1918710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008496">
        <property type="entry name" value="TMEM222/RTE1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20921">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 222"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20921:SF0">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 222"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05608">
        <property type="entry name" value="RTE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12468" checksum="778E75311FCFCE3E" modified="2025-10-08" version="1">MTGKVRRFQKIDLGELSVDEKHGLSKEEFWDECIEEADAAFRKKPHNLITNNCHDHVIMALNKMGIDAKVIPFTAKFTLEAQFVDKKSAVLVYLPFLLILIFLLFFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG5</accession>
    <name>A0ABV2AGG5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000671</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000119">
        <property type="protein sequence ID" value="MES1918760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="64"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="82"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="258" mass="29230" checksum="82ACCC7A50AD014F" modified="2025-10-08" version="1">MHYDKHHKYQCCHPRHHGKEDCKDGYFNVQVPLPPKARPGIPGHPGTPGAPGIPGRCFEGSAGPRGPSGIPGVPGSPGPFGPRGVMGPRGHPGQPGAPGRPGAPGRPGTPGPSGCPGMPGTPGGSFRRTENYFEHGNREKLENGEQYHHKERDCLPRWGKRKMIKHIAEIFENNDLQNHHYSDCRNYNNGLFEQIAELIENWSHGDDYHNEMWDNDKYHHKKYDEDEEYYHNMHDDYDNQHKHYDEDDYRGSYVKELD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU6</accession>
    <name>A0ABV2AGU6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000799</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000152">
        <property type="protein sequence ID" value="MES1918906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="176"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="210"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="287"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="314"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="351"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="374"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="398" mass="45070" checksum="EEE0BF34509D7096" modified="2025-10-08" version="1">MDSTIEGATIAIIGIQSTTTVLAVFLIGSLYMSCKNKSKDVGASLENLGFKHKMLAFIIGMSQIVSLMTILGMARNWIHFFSEWEYTSFNLYSTIPGIFIPLFVPILVKRFQYSTLFYIAQIASIFADFMLVFAIYISIHDISEGLTIMMFILVSTGLSLSQTVSFSFLNEIDSRLLPFMIAGLPTATMVSNLFILFIEFLSLSIVNTQLYFFFPAIFLHFLGIAAFAYMYENYYHLPVETNSQSSEDENSYERTPLLGDTSSRKSCDCQNARFVCREKGCLLFNNLMLFTQTFLIFPAIVFLMVSSFKPLEKYWGTIISMLAGSSELVARMTNAVGKSCLTGKKTTLRCSYARMCLVNIPIIFFFAYKKYFYIPGPVIDISNIFLYVYAFFTMGAMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGZ1</accession>
    <name>A0ABV2AGZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000777</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000148">
        <property type="protein sequence ID" value="MES1918882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10981" checksum="2CC702FA60450539" modified="2025-10-08" version="1">MKNWNSKRNANETQRILNLLQNWKERMNGREVLMLSGASGVGCFADIYKDKHLFKQMITCPVADDNLNFFSFAHWNYKNKICLAKFYSFFNFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH32</accession>
    <name>A0ABV2AH32_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000887</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000178">
        <property type="protein sequence ID" value="MES1919008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15403" checksum="FA3B170DE843E1E9" modified="2025-10-08" version="1">MSSVDVSNRVSWATLILVIISIISIAIAIVVMLVRRNNTFILMAKNENYHPTPDNLEQIYKNYLKKNKTDFIDEIETSKKEFAPEVVELQNNPPNFAKKRKRKIKKKKKKARDAAILKNQTIDKSEKVEIAIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH64</accession>
    <name>A0ABV2AH64_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000894</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000179">
        <property type="protein sequence ID" value="MES1919016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14704">
        <property type="entry name" value="bZIP_HY5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BZIP" evidence="2">
        <location>
            <begin position="20"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="38"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="19209" checksum="C858AD359B3204DA" modified="2025-10-08" version="1">MAIVQNIDQKFGRITLTANEIQKLGRKMRNRLSAQKSREKKKQYITELESKIRHLSQENIKLKRKLQNSQNLVETKNAKINLLESENKLLSKDLQHINQKIDISKDKIFVKFEESEFRVTEEGSNQKSAALLEKLSPQLDCPLLLILTMILFFNVTTQTVPNFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH2</accession>
    <name>A0ABV2AHH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000993</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000205">
        <property type="protein sequence ID" value="MES1919129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046199822" evidence="1">
        <location>
            <begin position="20"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17916" checksum="764FE383177BE3BC" modified="2025-10-08" version="1">MYTFIYALVFLDFATSIHPKVCMPYITLDGRNTYNPVLCVPGNKECLEKCLPCYSRQKGDNEHKCDFSTGEWSGEPLACQREVCGDLPDNDTFRNMKMNDSNCAWNGNCTVSCEDNFEETNTNRKIVCRENIDEKNVCTPTWKFEYSKLEKNLVCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ5</accession>
    <name>A0ABV2AHJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001002</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000208">
        <property type="protein sequence ID" value="MES1919138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="28869" checksum="8D0AB41891C276E9" modified="2025-10-08" version="1">MVFLGINEQTYLSRYIEDTYNTIPWKYFAYIEDDYPIPSVLDMIIEYDDMMESRADCLWEEINDTEFRKALHKEILIEETISWVEKGNIPLNALFMEQRSILKKTRKVKSFIQNYYMLSANDLKPDSEGFIELGHLQGFFLSAYSYKHFWYIISTSEHFEIKNQKVRSRNKWNILCFEMQNCQAEKAKIIDDETDSDSDKEESIVQRRFRKRKNDGELKQGKFDNIFNLEFRSIAEILGGSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU8</accession>
    <name>A0ABV2AHU8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ferrochelatase hem15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">HEM15</name>
        <name evidence="2" type="ORF">MHBO_000931</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ferrochelatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000188">
        <property type="protein sequence ID" value="MES1919059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03411">
        <property type="entry name" value="Ferrochelatase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1400">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001015">
        <property type="entry name" value="Ferrochelatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033659">
        <property type="entry name" value="Ferrochelatase_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00109">
        <property type="entry name" value="hemH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11108">
        <property type="entry name" value="FERROCHELATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11108:SF1">
        <property type="entry name" value="FERROCHELATASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00762">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53800">
        <property type="entry name" value="Chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21303" checksum="1059A118C839863E" modified="2025-10-08" version="1">MLNMGGPADLSAVRPFLSNLFKDADLIQSNSFLLRNLMSRLIVNARSHRVTEQYKAIGGGSPILSWTDFQGRKMTELLNSKLGHKYFFKHYVAFRYAHPGAKDALLKLKADGVEHAIAFSQYPQYSCTTTGSSLNEIWRNLKTLELQNEFKWSLIDRWPTNEFFVGAVTELIEEQLAKFDDPAKVLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI05</accession>
    <name>A0ABV2AI05_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NAC-A/B domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000984</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000204">
        <property type="protein sequence ID" value="MES1919119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22054">
        <property type="entry name" value="NAC_NACA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.30">
        <property type="entry name" value="Nascent polypeptide-associated complex domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016641">
        <property type="entry name" value="EGD2/NACA0like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044034">
        <property type="entry name" value="NAC-like_UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038187">
        <property type="entry name" value="NAC_A/B_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002715">
        <property type="entry name" value="Nas_poly-pep-assoc_cplx_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21713">
        <property type="entry name" value="NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01849">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19026">
        <property type="entry name" value="UBA_HYPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01407">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51151">
        <property type="entry name" value="NAC_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAC-A/B" evidence="2">
        <location>
            <begin position="25"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="104"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="117"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18500" checksum="F901D1AA781C238D" modified="2025-10-08" version="1">MAAEDAMSNMMNQFTVNPKMVAYQNKMARKFKKSLLKKNIRKLSDIKRVVIEKGHGILIVIDHPEVYHVNDTDSVVVFGDAVIDDVTMEAQKKAAKMLQEYAEKKSAEEKENSATNAEEEQVDETGLDAEDIEMVMDQGGVDRAGAVKALRENLNDVVQAIISLTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI10</accession>
    <name>A0ABV2AI10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000252">
        <property type="protein sequence ID" value="MES1919305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="23270" checksum="D97333F180375251" modified="2025-10-08" version="1">MAIYNGKGFPLNLALVVFFFVIILFYLPFGILVKERRYFQPLKSRDFRSLLFLSLLSFLFSVSVIVEWSFFSKHLFAFWIIFVELFLWMSISAVYLIRLLDFLIAQKNQGRIDQMDVTWINKVANALKTPFWNIFAFVLFLIIFFSPVAALTLWRKDVLFVSVKNTNAVPFEIFLFTFISLFLLLYGVGVIMIRFCAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI38</accession>
    <name>A0ABV2AI38_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001194</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000262">
        <property type="protein sequence ID" value="MES1919346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14082" checksum="87A1AAD2D63789F9" modified="2025-10-08" version="1">MHETHCRKRLKKCPNLGCAEMLVLGQPEKHVHCDECNLAVANLGKHKDLYHSLMECGCRLQVERCRFAEHKKNVFNAIKELRPQEGGMQVLRNKDAFQQDEGARKEVRCKIERMRVLQKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK0</accession>
    <name>A0ABV2AIK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Linker between RRM2 and RRM3 domains in RBM39 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rsd1</name>
        <name evidence="5" type="ORF">MHBO_001308</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000305">
        <property type="protein sequence ID" value="MES1919483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="31"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13514" checksum="C936441B44283285" modified="2025-10-08" version="1">MSATIESQSKFNENNSTQHRLINFENEHPRAQIYIDNLPNSMTKDDLEKLCNPFGEISYIKFLKHKAENPTGYGFVAFSDLNNAYNAIKGVNGKVIESHYIRASFGTFYTFNHFYTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIL9</accession>
    <name>A0ABV2AIL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protein disulfide isomerase</fullName>
            <ecNumber evidence="4">5.3.4.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">PDI-2</name>
        <name evidence="4" type="ORF">MHBO_001335</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein disulfide isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.4.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000314">
        <property type="protein sequence ID" value="MES1919519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003756">
        <property type="term" value="F:protein disulfide isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02961">
        <property type="entry name" value="PDI_a_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051063">
        <property type="entry name" value="PDI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45672:SF2">
        <property type="entry name" value="PROTEIN DISULFIDE-ISOMERASE A5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45672">
        <property type="entry name" value="PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00421">
        <property type="entry name" value="THIOREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="22"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="29324" checksum="6B388F3357C37451" modified="2025-10-08" version="1">MPKMTEATEKCKSTDEKIKPKKSKSEKKESFVVAATDKTFGSVVASSKLPVFVEFYAPWCGHCKNFAPEYEKAARKMESTALFVKIDATTESALAKAYKISGYPTITYSANPVKSGKKGYDIDLEKYSGGRTSSDLISKAKYLLKKNSAVKEKTDAQIEAILKKMEGRAVVFANSKRAHSHIIDAVSIYFEDVEKTAFFKTDVKSKNVKDLLKMGEKKMAIIDSAKEGKIGVYKYKGVFEFNDLTRDLEGLFKGIKESIDKSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR2</accession>
    <name>A0ABV2AIR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">WD repeat-containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">WDR1</name>
        <name evidence="4" type="ORF">MHBO_001374</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000327">
        <property type="protein sequence ID" value="MES1919565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19856:SF0">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19856">
        <property type="entry name" value="WD-REPEATCONTAINING PROTEIN WDR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="59"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="234"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="406" mass="44545" checksum="0CACAD63736049A1" modified="2025-10-08" version="1">MAFKVVREAKRTIPPLPKTARGFGIHIDGTTAGGKRLIYTNGRFVVIRSLEDQFEATVFGGHQCNVNVAKFSPNGEWVASGDCQGNVIVWGARTQTAKNQLRANNSVLDISWGADNSQIIAAGDGGDGYFAKVFRIDSSNSIGEISGHSKKILSCAVKPSKPHFIATASEDFSVNTYKGVPYRHQKTQRLFKNYPNCVRYNRAGDAFAAVGSDRRICLFGGEGELLKQVDAKAEGAHKGSIYSCCFSPDGAKLLTSSGDKTLKVWDAASLSCEHTFSAGGRVEDMQVSCLWLEGFIVSVSLSGAINFFEEGEGAPSRTWNVSLFTKGPPRRDQEHRGAPVGEEAVLGGDRWEDCGMGLGALCLDVFQRRPRRKADRSDGRFFGWRQNLFGRVRRQLLCVRCRRQEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX4</accession>
    <name>A0ABV2AIX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribosomal protein S15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPS15</name>
        <name evidence="5" type="ORF">MHBO_001178</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000257">
        <property type="protein sequence ID" value="MES1919328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.860.10">
        <property type="entry name" value="30s Ribosomal Protein S19, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00531">
        <property type="entry name" value="Ribosomal_uS19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002222">
        <property type="entry name" value="Ribosomal_uS19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023575">
        <property type="entry name" value="Ribosomal_uS19_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880">
        <property type="entry name" value="RIBOSOMAL PROTEIN S19P FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880:SF2">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00203">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002144">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00975">
        <property type="entry name" value="RIBOSOMALS19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54570">
        <property type="entry name" value="Ribosomal protein S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="17098" checksum="2552EA16C37E7F44" modified="2025-10-08" version="1">MSSQKTERKRFRKYYYRGVDILELIDASKEEFKELLPARMRRKIKRGKKNREIIFRKKLLKAKHAAAKRTDNKIKTVKTHLRNVMITPDMISSRVAVYTGKEFKEFEIRQNMIGHYTGEFALTYNMVAHNKSNVSKTSRFVPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ52</accession>
    <name>A0ABV2AJ52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001481</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000369">
        <property type="protein sequence ID" value="MES1919697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43157:SF31">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43157">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16251" checksum="31A4204A3C329A7F" modified="2025-10-08" version="1">MMTIDRVSFVAICVVLAPTLLTAFLVIRKCVVEKIKIGNTEKLLNSSKTKSFVSGKKVLITGGNKGIGYSTAIEFCRLGATVLITCRDVEKGRIAIQQIENKVKLASINFKVLDLLELQSVRDFAGEVLLEGTKFDFLINNAGFFGEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ74</accession>
    <name>A0ABV2AJ74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001515</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000384">
        <property type="protein sequence ID" value="MES1919735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="94"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="164"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="200"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="206"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="245" mass="27158" checksum="FBA28A0C7553A226" modified="2025-10-08" version="1" fragment="single">MVHKNTLTLVSAALCSAFNIVLIVFIAFTYDGLAKVRPYPLENSLITADVGLFGQNMTNISTKDNVKESFFDKSSSICTTQFCIDNLSAFQTVLYGGIVISAVVLLANIYAVIINLILIGNVKLSKILDLIIYVLAIVAGALMPVYFHFFWLEKYPFPKSTMSLVFFFYGSIALPVFALIGMLTYLIATFKTEKKIQIEESSGFKGDSDKSGNKESNKDEKEESEAEKEKEPSKSSDEKKEKSEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA8</accession>
    <name>A0ABV2AJA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001544</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000395">
        <property type="protein sequence ID" value="MES1919771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="8750" checksum="01C24C7B86CFA83E" modified="2025-10-08" version="1">MSFGYNCGPYWGGNCGPYYGGWNNCCPTYKYGYCWGCVTPSYGGWNNCGYGGLNNCGYGGWNNCGYGGWNNCGYGGWNRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJW7</accession>
    <name>A0ABV2AJW7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Neuroguidin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001697</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000459">
        <property type="protein sequence ID" value="MES1919955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007146">
        <property type="entry name" value="Sas10/Utp3/C1D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13237:SF9">
        <property type="entry name" value="NEUROGUIDIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13237">
        <property type="entry name" value="SOMETHING ABOUT SILENCING PROTEIN 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04000">
        <property type="entry name" value="Sas10_Utp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="296"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="181"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="298"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="315" mass="36994" checksum="6375BF1C81E915E1" modified="2025-10-08" version="1">MTENIKNDSKFVNLSFVKSEIEKQISTISSITKLQKKDFDPKDGISILTLRNNALILYNACVAFISKQILTNQNIKDHPAIFESIKLRVLIERIDPLIKKLQPKISNLLKNSKFGPETKSLNAFNADSDALFLKPNPNNLLKDKSTIKKPQITKEQTTFNNDQDEKYKIRKTESVPYPFENEGKAKKQERNRKEREKKRLLQTGMIESLKEEIRSASGLPEKQSTKFKNMNRRKMKDINLIMEREEYELENFVRLPETKKDKIRKREIMKTIDMDIEAEIGNDSANFRRIDNLDNLNKRKRVKKKHKKSKKFKKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK14</accession>
    <name>A0ABV2AK14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serine/threonine-protein kinase tnni3k</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">TNNI3K</name>
        <name evidence="4" type="ORF">MHBO_001738</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000477">
        <property type="protein sequence ID" value="MES1920008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24198">
        <property type="entry name" value="ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24198:SF165">
        <property type="entry name" value="ANKYRIN REPEAT-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00023">
        <property type="entry name" value="Ank"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="35"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="68"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="102"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="18341" checksum="67C6A34355C4E650" modified="2025-10-08" version="1">MPKDEQIHKAAYKGELAAVENIIKEGFDINAIGAGNRTALHRAVGGGHEEVVCFLINNNADVNVVDANGRTPLHWAAISDSIDCANRLLSTNYIDINKQTKTGATALHMAIENNNANFALFLLNNGCRTDIKDFDPSRPKTALMMAEEKKMNSVVKRIKPESGCCDLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK29</accession>
    <name>A0ABV2AK29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">SKP1-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001589</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the SKP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000414">
        <property type="protein sequence ID" value="MES1919829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18322">
        <property type="entry name" value="BTB_POZ_SKP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016897">
        <property type="entry name" value="SKP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001232">
        <property type="entry name" value="SKP1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036296">
        <property type="entry name" value="SKP1-like_dim_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016072">
        <property type="entry name" value="Skp1_comp_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016073">
        <property type="entry name" value="Skp1_comp_POZ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11165">
        <property type="entry name" value="SKP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01466">
        <property type="entry name" value="Skp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03931">
        <property type="entry name" value="Skp1_POZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028729">
        <property type="entry name" value="E3_ubiquit_lig_SCF_Skp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00512">
        <property type="entry name" value="Skp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81382">
        <property type="entry name" value="Skp1 dimerisation domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="SKP1 component POZ" evidence="6">
        <location>
            <begin position="21"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="SKP1 component dimerisation" evidence="5">
        <location>
            <begin position="127"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR028729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="176" mass="20136" checksum="10FC6BB47002038D" modified="2025-10-08" version="1">MDKTNKEKNPKSANDAEQKTLNLLSKEEESHPIDIDIAMKSSLIRTIWEGDRTERAIPLINVGSSELKKVIEFLKYHKNVPFEPIPTPLKSKNMREIVPEWDANFIEMDQSSLFKIILAANYLDIRDLLDLSCAKVATMIKGKSVEAIRECFGIENDFTKEELKAVKIENGWTNIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK33</accession>
    <name>A0ABV2AK33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001752</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000480">
        <property type="protein sequence ID" value="MES1920023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.90.10">
        <property type="entry name" value="Phospholipase A2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010711">
        <property type="entry name" value="PLA2G12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036444">
        <property type="entry name" value="PLipase_A2_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12824">
        <property type="entry name" value="GROUP XII SECRETORY PHOSPHOLIPASE A2 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12824:SF8">
        <property type="entry name" value="GXIVSPLA2, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06951">
        <property type="entry name" value="PLA2G12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13751" checksum="250F2955091CD1AC" modified="2025-10-08" version="1" fragment="single">MFILIFIKMSLIIAENMYSDKSIGGIPVNDLVDLGIQANEVYNTINGFEICDKKEHADCYFSCGRGLKAVPREGHVPESNGCGAEGMDVKGNFDFTDECNQHDICYHTCLSDRKECDVNFEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB0</accession>
    <name>A0ABV2AKB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001834</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000519">
        <property type="protein sequence ID" value="MES1920118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="23910" checksum="365E500CB6017BD2" modified="2025-10-08" version="1" fragment="single">MATLFTPTDQEIAENRKMWAQNNEEEFLDRRTYFDLIGDDLPEHHFWKKDQNQKIVPNIMTPLQSTHHTDMTNIPRFFPNGLPKTPLKNQSWYVPLDKNGRFDWRQNIVKNQYYPVFHKKNWESTRYQRVSLMAYLPIKGNELTNYADNIFKGFRPFKVNQVPFRVRFSRMCSNVGRFSYLYLVKFGFLLLIFRKPFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE0</accession>
    <name>A0ABV2AKE0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UTP25 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001858</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000529">
        <property type="protein sequence ID" value="MES1920148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010678">
        <property type="entry name" value="UTP25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053939">
        <property type="entry name" value="UTP25_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12933">
        <property type="entry name" value="ORF PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12933:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 25 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06862">
        <property type="entry name" value="Utp25_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UTP25 C-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16829" checksum="904BE043AF51D80B" modified="2025-10-08" version="1">MKNKILKEIVSAEESQNLIFVSRYFDFIALRNYFSRNNYSFDYCSEHSTVGDNSRARTNFLNGKTQFLIITERFYFFRRLRIRGIRNLLFFDLPLNSHFYNELVDAVNADGNFVQTKAASVRSFANTTGTSWREFWAATKKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE6</accession>
    <name>A0ABV2AKE6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Nuclear condensin complex subunit 3 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001864</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000533">
        <property type="protein sequence ID" value="MES1920156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027165">
        <property type="entry name" value="CND3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025977">
        <property type="entry name" value="Cnd3_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14418:SF5">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14418">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12719">
        <property type="entry name" value="Cnd3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5" id="KW-0226">DNA condensation</keyword>
    <keyword evidence="4" id="KW-0498">Mitosis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nuclear condensin complex subunit 3 C-terminal" evidence="7">
        <location>
            <begin position="3"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF12719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23874" checksum="85D7C790F7B99BB7" modified="2025-10-08" version="1">MMYTAVEGFAKLITVGRVREVKPISMCILLLFNPNSSDEEPIQQCLSLFFSSFLLLKGKNFANNARLFAKAFLPTIKIILHAPLSSPLSKISVQQFSNWTFSFFPENHQDFTDKDCYEKHKETIDQIRASLTKFILNEILKNDFKNEKDNAEALIFSKLLLPIRLVPDNKEIAKIVKRIIKKLEDENCDKFVKINLRRFIRSNSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF6</accession>
    <name>A0ABV2AKF6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Zn(2)-C6 fungal-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001860</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000530">
        <property type="protein sequence ID" value="MES1920150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00067">
        <property type="entry name" value="GAL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050335">
        <property type="entry name" value="ERT1_acuK_gluconeogen_tf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036864">
        <property type="entry name" value="Zn2-C6_fun-type_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001138">
        <property type="entry name" value="Zn2Cys6_DnaBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47659:SF1">
        <property type="entry name" value="TRANSCRIPTION ACTIVATOR OF GLUCONEOGENESIS ERT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47659">
        <property type="entry name" value="ZN(II)2CYS6 TRANSCRIPTION FACTOR (EUROFUNG)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57701">
        <property type="entry name" value="Zn2/Cys6 DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50048">
        <property type="entry name" value="ZN2_CY6_FUNGAL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Zn(2)-C6 fungal-type" evidence="4">
        <location>
            <begin position="276"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="221"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="357"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="357"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="571" mass="64949" checksum="B0A8556068D985CF" modified="2025-10-08" version="1">MLKFFANRKNSEPVADQNQNYPRQKNLFADCSKTVSDGLENFGKNRPPPKNDIYFDELSEKDIWDFDEEMNKSLFDFGSNDSIFDNPSIEKTENAKSYALKKTKIDKMFHVSSHLHPFTKQMGPKIDPAATLKIASLDFRPLKKRMPKTWLLSDILKNDRTLFKNAFNYSDPFSTAEYPNLFANLKNPQNENFEKIGDPKTKDDTKTKNFESEILISDQTGKTKIGQKSKQRENFCEATNPTQSSEDEIRSKPFTPNPTTEFYPIHSTRRKQTARACVNCVRAKAGCDKNRPCRRCIRLEKQSCVDRKLNPNRKNSRNKYSLPLKAKTEKFCNNTTFSDDFRKLRLSGPNQTDFAITSEKSVSESAEQNLAESGNENRTDENLDDFIRKKVASLRKEGKASRGVFAAASFFVGNSSLRSKLIKMFGGEKIFEFGQINVDTKVAHFSISGKDSNLPKIEVLVSNMTDLGKNVFALFDINRAAQDLFKMPTRNLAAKLASSPYSVFPKKEWPRLFEEMVQLFTLRKKRIEGYFSVLDSAGNKIPCFAVLSVRDLINSNGGCGVSFVIDPIENI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKJ7</accession>
    <name>A0ABV2AKJ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Elongator complex protein 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001891</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">tRNA modification; 5-methoxycarbonylmethyl-2-thiouridine-tRNA biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the ELP4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000545">
        <property type="protein sequence ID" value="MES1920194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008728">
        <property type="entry name" value="Elongator_complex_protein_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12896:SF1">
        <property type="entry name" value="ELONGATOR COMPLEX PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12896">
        <property type="entry name" value="PAX6 NEIGHBOR PROTEIN PAXNEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05625">
        <property type="entry name" value="PAXNEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0819">tRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="34077" checksum="F12CF9DA5D261E73" modified="2025-10-08" version="1">MPSGINFFDDIFSPSKLGFSTGQICALIIDQKTCHFKDFLKKFLFFHQSSENPSYYLVCEEDFLTNFNKTAKSADLKAKNQTQNLANQPNLKMAWQYNKYFTNNKSKNDPTFFFNGPILENDDTKNNVEKDKFVIMEKTNDFGLQYLKNKIIAKNKFRMYTDIFLKSDKSVNEQKLWRTLYIFKQFVKTQNCVLFIAIKNEIFTNKLRHLVDIILHVKSFEGDFNSPNPKSEYGDYDGIVNLLKCSFRATNDFCFLYKKRFKNLKIEKFSLPPEMLREDLAETKIDDKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP9</accession>
    <name>A0ABV2AKP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000464">
        <property type="protein sequence ID" value="MES1919973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10770" checksum="255F67B88018E34D" modified="2025-10-08" version="1">MAEEKLCSCHKNSIRLMLKRPNSSAILSIDSAGLIHYTENGVCRTNSDDITATETSIAPNPITAASFSPTVGFQHYKGNPFRSGWTCQIYFFAQHEGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR6</accession>
    <name>A0ABV2AKR6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Acetyl-CoA carboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001620</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000427">
        <property type="protein sequence ID" value="MES1919867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.226.10">
        <property type="entry name" value="2-enoyl-CoA Hydratase, Chain A, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.460.10">
        <property type="entry name" value="Biotin dependent carboxylase carboxyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049076">
        <property type="entry name" value="ACCA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034733">
        <property type="entry name" value="AcCoA_carboxyl_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011763">
        <property type="entry name" value="COA_CT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011762">
        <property type="entry name" value="COA_CT_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45728:SF3">
        <property type="entry name" value="ACETYL-COA CARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45728">
        <property type="entry name" value="ACETYL-COA CARBOXYLASE, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01039">
        <property type="entry name" value="Carboxyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="ClpP/crotonase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50989">
        <property type="entry name" value="COA_CT_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50980">
        <property type="entry name" value="COA_CT_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CoA carboxyltransferase N-terminal" evidence="1">
        <location>
            <begin position="304"/>
            <end position="616"/>
        </location>
    </feature>
    <feature type="domain" description="CoA carboxyltransferase C-terminal" evidence="2">
        <location>
            <begin position="618"/>
            <end position="897"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="983"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="983" mass="112843" checksum="8F8CE7CEE41F20D1" modified="2025-10-08" version="1" fragment="single">KIDSIVHKYRNGNSFYCFSIVKDFLQQIANSEQPFLRSSFSSAISDLCKLEHNIETKNGDFEEIISKTRSHFNSSLKNQLAVNLLEKLSFENYKHDKNGEFAKICKNLSKLPKEKYSETVLKSRKIYLELKFNLDKVSKLRIEFLENQTGYRFNGDVAIENGDIKQKFGQFLRQFEYFLISEKCPIFAETKNILVLNAIKSDDEANFEKFQKIIENVFKAKNDKMKRLSLKKIIIKYGTSQICYKNVTGFKWERQKELHKQNNNEPKLENNVDFAKIKNGPGNKRFYSKSVLKNGKNDQIDIATKRKMAEKLKTTFYKDFLTLFKTAMSDFSDLKSKSDFGYEEYFLSADKKEMIASSKHCRKEILTNCGVKVFKLRFGFSSKNITAMLIVNDLTHKYGSFSLDESDLFCLASKKSRTEKLPLIYISANSGAKIGVADEIWNKMRVCAKEMYLYLYKEDAENMKNHIEGTIVHNKEENKAVFKLSAIIGKEKGIGVENLSASGAIASEMAQAYEETFTLSYVTGRSVGIGAYLVRLGRRVIQNKNAAILLTGFNALNKILGDNIYTSNLQIGGPKIMSPCGITHLVVEDDMKGIFEIVRWLNYLPHKSDLFKNDFITTKNSKIDEFKSYTPFEVIETIFDPSSFKEYLGDWAKSVIIGRARLGGIPVGVITSEMQKSNKIVPADPAVNESRETVISRAGQVWYPESSQKTAAALRDFTRENLPIFVLANWRGFSGGMRDMFDEVLKTGAEIVCALKECKKPVFVYLSPKAELRGGAWVVLDSKINPSVIETYSSKSARSGILEAEGTLDVKIKELRIENLARRLDAVLSSKETRCDQEKIRKREKQIFPIYRKAAVEFVDLHDRPERMLKVGVVRKIVPFGEARSFFRKRLCFKLKEMEMVDKIKILENISFEEAVEVFRSYLKNKKICFEVDTKCFEKMEEDFESFLAKREEKQLLLKIEKSVYLDKKTKNDLEIILKQNCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKV5</accession>
    <name>A0ABV2AKV5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">TOR complex subunit lst8</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">LST8</name>
        <name evidence="5" type="ORF">MHBO_001803</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the WD repeat LST8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000506">
        <property type="protein sequence ID" value="MES1920084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037588">
        <property type="entry name" value="MLST8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19842">
        <property type="entry name" value="G BETA-LIKE PROTEIN GBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19842:SF0">
        <property type="entry name" value="TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="72"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="26016" checksum="8B61D918A3E2AABC" modified="2025-10-08" version="1">MKINKICTGDYNGTIKFINPKNGFSDRTIYYNSSQINLIRQIPFYSRIAVAAAPNILTYEVGSDNTLPLETYIGHKKCVTSLDFFGDRTKMASCSEDKTVKIWDFKLPNKVNEFINDEPLCGVNVIDDNTIMSCDYEGNLNLFDQRKHGLLKNNYIGRDISFTSISANTSKSLLAATDLKGDCFVFEMDKNYDLELIKRFSAHKSYNLRCGFNSASEFYLLINLNCAIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB1</accession>
    <name>A0ABV2ALB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001961</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000580">
        <property type="protein sequence ID" value="MES1920274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="17036" checksum="642894C609A6BED2" modified="2025-10-08" version="1">METEIKKRFSLYTNFNKKLGSLVVHVPFKTLGKKEMKEIFKNELLNTLSCIDRFECVRFDKRVVDFLVSKWESSEIIKKMNGRAFHKYIYPTFVDEEIQRTKNLLKVKGKKRHLKLAIKKNGDKDFLKADLAFEFKKLNKKDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALE6</accession>
    <name>A0ABV2ALE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002152</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000697">
        <property type="protein sequence ID" value="MES1920488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="337" mass="38680" checksum="1E88519E24414CFB" modified="2025-10-08" version="1">MSDNKSIELNDNSGSDGDVKILTKRKRGSGGDVIDVDAFHKKSSSNLKKQCEQGDLNRVKELIKSGLIADEACVYRAAKEGHRDIVRHLLDINTHFNINIFLFIKDTQTLQILLSRQDLANSPKDDSERKILENMKKIGKLFSESAKRQQEEYGAYVELCESRNFGKIKELLSEGKMLPPKILNLCFEKKDRELFKVLISEKSLFLGADGEDGLKEVSPVLTAVQLQKIVECGWFEEANSLLENGLRYSHDEIDEENPQLLEILSKHPKQLDFPFCAIDVWYQREKSVGLMTVMEHAIVVRQKILRLFDIVKERNLEEKAYIKAFCECMKSFLMMKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ2</accession>
    <name>A0ABV2ALJ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">TOG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002176</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000712">
        <property type="protein sequence ID" value="MES1920510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="266"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="304"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="316"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="364" mass="42038" checksum="7C24B9E836D1925F" modified="2025-10-08" version="1">MISDDDPQKIFDDLKILETEVTKNPKKFQNDFSSIFEIIKFANEKAENSDLVRSMSISILTKILPQNLQQQKFENFVKFVLAKFCKNGNSVNSNLNFLAQISKIDFANFVKIAAESLKIAKFFESKYVVIRTLANILNDENLEKADKSDLFSVVLSAFTIEIEEKSKENEILSFIGFFIKNFGEKNILEIANTAELSQREQYFAKRKILRIESNFNKSEISADFVLPDVFRIDFAKIEPKLLKMDDFASFNENDLKKNAIGNSKDGANYKDYSSDSDAKNNFGDTNKQKTTNFNKDYKLIESSISNKTENDTNNDTNKDRNKDRNKDEKIVKKRIEKNKNGKSNDVVNRITDIRKRMKQLNFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN5</accession>
    <name>A0ABV2ALN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002239</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000750">
        <property type="protein sequence ID" value="MES1920582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20510" checksum="4958783B73ED5000" modified="2025-10-08" version="1">MFNYVGSIPVVALALFIPLLMKFVSISKIFYINAVAQIISSAVLIFIPTMKVKLGRDTALAITILFLLISSAGFAVSQTAIFAFAAEFSNQTVQFYITGLSVANLLYGLYFLPFPYYVKNLQTRMIYYFILPLVVHFASVIIFYFTSKKIPKKEERVEILILERNRKKRDKIGTEHHGEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALP4</accession>
    <name>A0ABV2ALP4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000756">
        <property type="protein sequence ID" value="MES1920598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.900.10">
        <property type="entry name" value="Dbl homology (DH) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035899">
        <property type="entry name" value="DBL_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000219">
        <property type="entry name" value="DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00621">
        <property type="entry name" value="RhoGEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48065">
        <property type="entry name" value="DBL homology domain (DH-domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50010">
        <property type="entry name" value="DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DH" evidence="1">
        <location>
            <begin position="12"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="23397" checksum="B82E97CCD7A741CC" modified="2025-10-08" version="1">MDKKDKKFYAERIKSIVRELILEEKSYLEFTLYPLLQTRSAVLDEFKNKQNQIKSIFKNINKLYEIHYDFFLKKINYKNININQFCGCLKQFSYKLIIIYQKFYSDFAKSIKAYKKLDNYIFSVVNSFYQTNIVESFKKILIFPLNYCQKLSMLIILLRKFRFEDEIGKIKLFVDQISELFIFGKIDNLLKIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM29</accession>
    <name>A0ABV2AM29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ubiquinone biosynthesis protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002170</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Membrane-associated protein that warps the membrane surface to access and bind aromatic isoprenes with high specificity, including ubiquinone (CoQ) isoprene intermediates and presents them directly to Coq7, therefore facilitating the Coq7-mediated hydroxylase step. Participates in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the COQ9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000709">
        <property type="protein sequence ID" value="MES1920504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.10">
        <property type="entry name" value="Tetracycline Repressor, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013718">
        <property type="entry name" value="COQ9_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012762">
        <property type="entry name" value="Ubiq_biosynth_COQ9"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02396">
        <property type="entry name" value="diverge_rpsU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21427">
        <property type="entry name" value="UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21427:SF19">
        <property type="entry name" value="UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08511">
        <property type="entry name" value="COQ9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="7 8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="4 8" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="domain" description="COQ9 C-terminal" evidence="9">
        <location>
            <begin position="118"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU366063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24845" checksum="AD61CE9EA6E0079D" modified="2025-10-08" version="1">MSEKIKLNICKQSLKYVHKEGWTNRILVKAANDLGFPDVTSQILKNGVFDVINYLTIKSHDIAIDKILKNQKKLCPKEILKYGILTKMKVLRPYSHRWQEAMLIGAKLDNLETTKSAIKKFSDDLWHVIGDDSTDLMWYFKRMALSLITSSTEIYQTTDLSENYEQTDKFLDSKLEDLDKLIIAPYFAKEVLKFGRIFSKNIFNEIREDLKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM65</accession>
    <name>A0ABV2AM65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002401</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000849">
        <property type="protein sequence ID" value="MES1920761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="90"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="115"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="24192" checksum="2AD8064521026447" modified="2025-10-08" version="1">MVSRNSRKTGKTLAKNKRKQRKISKKPQKRQTLDIWESKEAVKQSPLNLQRTMRKKPIPKISFKNENQIRKRVEKLKTEVKSPVKIRKIQKTLPRKQKRKGERKKKKEINKKRRKKIAENKLKLKNEEKKKLKDIDKIDQIIKDIDEETANKKKLIEISKLEKQLAKSKNDKQNATPIRTFSPSNIAQSLLNFIKKKKDLIWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH5</accession>
    <name>A0ABV2AMH5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UDENN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002482</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000913">
        <property type="protein sequence ID" value="MES1920860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11500">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001194">
        <property type="entry name" value="cDENN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005112">
        <property type="entry name" value="dDENN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043153">
        <property type="entry name" value="DENN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051696">
        <property type="entry name" value="DENN_Domain_GEFs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037516">
        <property type="entry name" value="Tripartite_DENN"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12296:SF21">
        <property type="entry name" value="DENN DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12296">
        <property type="entry name" value="DENN DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03455">
        <property type="entry name" value="dDENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02141">
        <property type="entry name" value="DENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00801">
        <property type="entry name" value="dDENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00799">
        <property type="entry name" value="DENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50211">
        <property type="entry name" value="DENN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDENN" evidence="2">
        <location>
            <begin position="1"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="257"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="409" mass="48472" checksum="8FA086535EDCD4ED" modified="2025-10-08" version="1">MQFCYPYESKYLPSKNNSEHFFILTEKNASMIYGSCLLYKESNSTYRGICISSHWPFFDNFKKFLSGLYERTMADKNKRNDVVLFDEYEIPIERVVSNYIFEVPLPPWGKIKVKTISFSGLEQVFTRAPPNELNYLHYDFLKLFNCLSVNNIIHCLSGILNEKRIIFLSNDISKLTCVTESYRTLIFPFNWMHIYIPVLPIYYIDYLVAPIPFICGILKSQLRQDMQLSDTIIIDLDENSINIFKCRHLDLIPESLSKKLQKKVKKLIENKNKKDKRIKNLEYNYKIYKIREAFIEFFGCILENYRKAIVYDADKKIKLFDKEKFISSKTEDTKKFFTSLSNTQMFQSFIDMVLESLKDVLNNTYRMFWIQGSCISTKRYKIIPKVILSKIQLLFIKPNTIVCLQINRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI7</accession>
    <name>A0ABV2AMI7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002364</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000825">
        <property type="protein sequence ID" value="MES1920724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23226:SF416">
        <property type="entry name" value="FI01424P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23226">
        <property type="entry name" value="ZINC FINGER AND SCAN DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="8">
        <location>
            <begin position="118"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="8">
        <location>
            <begin position="146"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20604" checksum="40241CE5C3DCF91D" modified="2025-10-08" version="1" fragment="single">MSPENSYTDFLEYEISRLHNNSYLEKDEINLNYLGPNRLYKDNRTVLKLEQDRNLLEGLEESYDPITMKYFQSLESKSHSFKKTFNSNHFETNFFSNEIFTGVLNNNVNNEQISGSVFTCMICNNRFDTKEKVIQHNRKHIGDRYFYCEICFKTFREQSAIKPHKNIHFGVKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU3</accession>
    <name>A0ABV2AMU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Actin-related protein 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ACTR5</name>
        <name evidence="3" type="ORF">MHBO_002586</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the actin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000996">
        <property type="protein sequence ID" value="MES1920980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00022">
        <property type="entry name" value="Actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00268">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="313" mass="35873" checksum="09D91B98A9DC92F4" modified="2025-10-08" version="1" fragment="single">MSAKRRKDLNEVLINGDFHRQIFSFPLEKDISSDDQYINSSIVIDNGSFRTRAGWSSELAPRLCFAPAIAKTKVKSRDLVLVGNQLNNKLPLSSNDISSPFTKNVVCDFSAMEHVLDYTFDNLANNPKMIENPILMTETLNNPSRPAMAELLFEYYQVPSINFAIDFLLSNFYNRFLISQTNLTKIDEYISNDFNDKNSLIISAGNDFTFVSPIKKGFCDFENTYRIPVGGKTNLIYLCEILKSKNQKMASHLTETTVFELMSKTCYCSLNFEEEILREKGKIDVKFCPSLTENDYFKKMENFFRADSSYLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW2</accession>
    <name>A0ABV2AMW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002609</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001013">
        <property type="protein sequence ID" value="MES1921004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="515"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="515" mass="60503" checksum="098735E5FCD20ADD" modified="2025-10-08" version="1" fragment="single">MITMKGVSLKKYFCDFREMKMIEKSTMRQMKLRRLETGANLSKKVLFLEDIKLFATDTHICLIYPNSSYTYQQEKSSVKFVRIKDMSFVGFSDFEAEKIVTDGCFDNDNNQILLYDAINNKISVFRNPVRPKTDFIDLENLQIEDLVIDVLKFLDTFCTKNSHLTGKQNLDLPRKMDFCYSNPFNTLKILSLSMLLIETLNEKNAKKEEILNLLLKSVSLNLTVLSNSDQSTKENIEDFVQKLSEVLMTLLESKISATTRKNIIEIFLENKILLEKSLKRFLQCTEKMAIKNDFCGFENALRPIFEILTDQKLAKIAFNIVEKMEKKLQIKLFYEIFEDILGKAKFEISEEIIFLFFKRFNNSISNNENSENSDLLCTVSFENIFKFIELNRDRISSRLSKEITRNFILLMENNKRRYPKDDFYDRFSEDFKTLYTFERQFKLSKGENEICVCGGTESLLVKIQFNGIEKRDIFLQTDFFERKFAFSNRSLNHFLVKSDYVNISFPGKFGNKEKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMZ7</accession>
    <name>A0ABV2AMZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">G patch domain-containing protein 11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">GPATCH11</name>
        <name evidence="2" type="ORF">MHBO_002641</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001045">
        <property type="protein sequence ID" value="MES1921043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025239">
        <property type="entry name" value="DUF4187"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000467">
        <property type="entry name" value="G_patch_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039249">
        <property type="entry name" value="GPATCH11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21032">
        <property type="entry name" value="G PATCH DOMAIN-CONTAINING PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21032:SF0">
        <property type="entry name" value="G PATCH DOMAIN-CONTAINING PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13821">
        <property type="entry name" value="DUF4187"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01585">
        <property type="entry name" value="G-patch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01173">
        <property type="entry name" value="DUF4187"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00443">
        <property type="entry name" value="G_patch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50174">
        <property type="entry name" value="G_PATCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G-patch" evidence="1">
        <location>
            <begin position="67"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="28816" checksum="BDEE3BD076D8C0AE" modified="2025-10-08" version="1" fragment="single">LVNCRKMSEKVEIDYMSDMFLNFDDRTIAKSAKRFGRKTKSAENFKKSIRKIEEENRIKGLSKKIPKTNIGHKLLSKMGYQEGKGLGKQKQGKQNPIPLYIRKRIKDGLGHLSRNDKTDFIISEKTIFEDSKKEDFRLLMQEKHRKTETSRQFLKFLRILDGLRTSLGNCDDNENLAEIIGWNENSEDGEIEDFVENLNLDKLLFSMKNLIGHLRKKYFYCVYCVRKFSNFENLKNECPGDGDDDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN26</accession>
    <name>A0ABV2AN26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">60S ribosomal protein L35</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002362</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL29 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000822">
        <property type="protein sequence ID" value="MES1920722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.3450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00374">
        <property type="entry name" value="Ribosomal_uL29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001854">
        <property type="entry name" value="Ribosomal_uL29"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045059">
        <property type="entry name" value="Ribosomal_uL29_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036049">
        <property type="entry name" value="Ribosomal_uL29_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00012">
        <property type="entry name" value="L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45722">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45722:SF2">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00831">
        <property type="entry name" value="Ribosomal_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46561">
        <property type="entry name" value="Ribosomal protein L29 (L29p)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="122" mass="14506" checksum="20E58B51E3B191ED" modified="2025-10-08" version="1">MPKLKLNELREKSKEDLLKLLADLRKESFDAKISSTRSKNKGVSGQKLLRKNIARVLTVYNQNQKAALKEHYKGKRYVPLDLRPKQTRAFRRRLTEEQLKMKTPRQLKREKAFPPRMYALRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN89</accession>
    <name>A0ABV2AN89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002521</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the WD repeat WDR6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000948">
        <property type="protein sequence ID" value="MES1920909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051973">
        <property type="entry name" value="tRNA_Anticodon_Mtase-Reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14344">
        <property type="entry name" value="WD REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14344:SF3">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="3 7" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="235"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="337"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00038255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="550" mass="62003" checksum="D0428A59A2BE1811" modified="2025-10-08" version="1">MSSELRFKSRNSCLMANSRITGLKIFSAFKNKEEITFVIYAHGPLITVASHSDSSFQNTFQTAEDGSSVHGVITLDGDDKKSHFFLIFAADQAAVVQIELDFAEKTVSLKRKCDFKTDRHWILSAKKLSPSCGEPESTIFRKSKKLLVAISTTLNTQLWQIRTETIWTATLIGSKTPNINSLAKSSALFGKCIRCLRVACGTSFDHFYCYKYSSNGENAFDTHFLALSEKANAISVRQKGAIFDIDWSPNGKMLCTVSDDRCVRIWNLDENGESPEIKELSLGFGHKVVKFKAQSRVLKCKWIDDARLVSAGEDGFCCLWKLTFAGCGPLLRKTLSLRCHPSQIWSVDYKKGVLATGGEDSAVKTWRLLEFEKNFSGANEKIKFELRKSDYVKRILCLKNGTVVVGSNNGFLFAKTETETILLKNFESAVTDLFEETNAIFVALKNGQIFVFQLAENGTDKKFLRIRTSFGIKGIGFIFVKKIEKETVILAVPPKSQKLEMILVENENFCLKQRAKFCADVFKKVKFSCCNLSVLKKFYRFYKIYNNSNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH4</accession>
    <name>A0ABV2ANH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TBC1 domain member 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TBC1D4</name>
        <name evidence="3" type="ORF">MHBO_002604</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001009">
        <property type="protein sequence ID" value="MES1920999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd19757">
        <property type="entry name" value="Bbox1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.80">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000195">
        <property type="entry name" value="Rab-GAP-TBC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000315">
        <property type="entry name" value="Znf_B-box"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23436">
        <property type="entry name" value="RabGap-TBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50119">
        <property type="entry name" value="ZF_BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B box-type" evidence="2">
        <location>
            <begin position="308"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="376" mass="43264" checksum="77BDC24602C5C9D4" modified="2025-10-08" version="1">MINTRDFLETEEDGVLAQKNLGFIDPEDYQSVCAIIKRARRWTDLLKISSEDVGRAKEALDSYEVPPKPARILLADAERTFACKRRREKLVEVTAFLFARFEEYQQNVTFICSFLLLFLRPRFAAAVMIKLYEDELLLPGHFKAASEGAKVDMLLFMQLARREGRCNAAVAKLDREGVPPDFLKKWFSGLCVHVLPLAALFEYFEFFAEEGFLACLKFGLAAFIKLEEEIVASKDIQDTMAVLHFDRKRLGAEKMKRVSMEILEMARDERFEVTENIDLKDLRSRVFKTEIEEKVLKADKYAEENPVDEIPVCELCGDGFQDLRCSDCNLIICEDCHECPPEKGGHKTEHEVFDFEEEENCDEISEDFEKLGIGDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI0</accession>
    <name>A0ABV2ANI0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001158">
        <property type="protein sequence ID" value="MES1921212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="32283" checksum="2EFFBD01F3A7389B" modified="2025-10-08" version="1" fragment="single">NFKMSDLPALIKKLYFNADGLNRQEIKKKLKNLKNLLKTSNNIQKSDFFDYIKSFIFEKSKTTKNNDIFISLNLASAIANKDIDFDRNMLKCSILNCYNNNIKSSTLKYIKKHAKHYRLMTFNILKPQISEQIEKNLIRKNFDANAIDNKKSVSIIETNLNLLSALFPKCFTRKNILNELKSQQIDYKVVFEIGVRHSNRFVRESVLNLVSAVCSSCFVDDQNASPEFSEILGFLGLKNGVIYVGLRDNWSQVRYKASIAARNFSDLFCWDQKIFKALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK4</accession>
    <name>A0ABV2ANK4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Translation initiation factor eIF-2B epsilon subunit, GEF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">GCD6</name>
        <name evidence="9" type="ORF">MHBO_002798</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="6">Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eIF-2B gamma/epsilon subunits family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001180">
        <property type="protein sequence ID" value="MES1921241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.10.10">
        <property type="entry name" value="Hexapeptide repeat proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051956">
        <property type="entry name" value="eIF2B_epsilon"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056764">
        <property type="entry name" value="LbH_EIF2B3/5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45887">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45887:SF1">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25084">
        <property type="entry name" value="LbH_EIF2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="Trimeric LpxA-like enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleotidyl transferase" evidence="7">
        <location>
            <begin position="24"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="EIF2B subunit epsilon/gamma LbH" evidence="8">
        <location>
            <begin position="319"/>
            <end position="418"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00046432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF25084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="426" mass="48607" checksum="A9650C1C1FDBC1A6" modified="2025-10-08" version="1">MARKTTKNNKKVEKETNTNNFIQTVILAVSESENFFPLTKTIPKLLLPIANVPAIDYILEMLQKVDTEEILIISSSEHCEKIQRYLDSSKYSRNKIFIFKLIPVISQNGNCDALRRIEQMDIIRSEPFILISSIPVTNFDLKPVIEIHRRNFKENRHNFITCVMKEYPKNHRNLSVTDNNFIVVTTPTKTSSIERILNFSQNWDNFDISKFVQNGQLNIRQGFVDIGIDICSLSVLRLCFDNFDYRLLRLHLLKNAIESEIEEMIAHIYVPDEKDYFGVVKEMKSFDSVTKDIIGNWAYPLGPQNNFYEFGLEIMEQSFIHPSAQISSTAKIKSGCIIAQNCKIGANSILEKTVLGPFSQIGENNKIENSYFLSGATIQDNCSVLYSFSGNNVTIGKNCLLNHATVVADNVKIDENTTTKQFSVIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANQ9</accession>
    <name>A0ABV2ANQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001224">
        <property type="protein sequence ID" value="MES1921290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="295" mass="34468" checksum="3F35EEA99E7EFA42" modified="2025-10-08" version="1">MAELFKANQIFQDDFLDRDVAEFLTTEYSIKIPEGCICDDKEEHLILESNDDLDTNSDCSDISSDDYSENGHLLENNDTQIFSGLKRKNEQISFPGDFKSDRNDFSSKEEQILLPKNAKKIKISADDNFCNLFNIIVDKIINKIIKEESKTVQIKEENFQFIENSPKNIEDKNEPILVNKNLTEDQIDDICSENDIISTILQEKSSESLKMDSKLIQNKNSQLSDIWDHLDSEDFQENELVIDEKDKNYYLKKLLEDVDDIEDIELNKKRYKIWFGDRCDETSNDNAEFENIFDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP33</accession>
    <name>A0ABV2AP33_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protoheme IX farnesyltransferase, mitochondrial</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Heme O synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002683</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UbiA prenyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001079">
        <property type="protein sequence ID" value="MES1921097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd13957">
        <property type="entry name" value="PT_UbiA_Cox10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006369">
        <property type="entry name" value="Protohaem_IX_farnesylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030470">
        <property type="entry name" value="UbiA_prenylTrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43448">
        <property type="entry name" value="PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43448:SF2">
        <property type="entry name" value="PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00943">
        <property type="entry name" value="UBIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="68"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="168"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="192"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="250"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="294"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="35180" checksum="CE77BAB28DD7604D" modified="2025-10-08" version="1">MFSAFKRAFKKRVANSEHSFLKSDLSLKEISKMTSKLVKFNLSAFNGLSAAAGYLFCASSTTAGISPLVTGAVFIGTTLSAFSSSIGNQIIERDLDKKMIRTKNRPICKNEISPKTAFSIASTFLTFSFLFLGGFCGVPSFVASLVTAILYIAVYTPMKRITHLNTHFGALVGALPPIIGGLAAGFDVWHNSLYVSAFYYFWQIVHFYVISTRFKDDYLKAGFVMQINRNPNQAAFESDLSCLGMIAAPIFSVCMGAVKWPVLIPIFLIWKTFFSEYLQYKRNQTLKQYIEFSMMQYVSVSLFVSFFVLGKWFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APH3</accession>
    <name>A0ABV2APH3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003103</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001495">
        <property type="protein sequence ID" value="MES1921571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23063:SF52">
        <property type="entry name" value="LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23063">
        <property type="entry name" value="PHOSPHOLIPID ACYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="107" mass="12654" checksum="5AC8388DEC6C90BD" modified="2025-10-08" version="1">MLLPFRTGVFGDGQNLQPIILKYPFKKFNPAFTGLHEKNGQIVKTNIYFYLWRFFSQFSHNLEVTYLPFRKANSEEKQFPRVYAKNVQNEMSAALKIPVSIPKRLYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APY2</accession>
    <name>A0ABV2APY2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001702">
        <property type="protein sequence ID" value="MES1921741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="383"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="406" mass="46819" checksum="2531528826043A9A" modified="2025-10-08" version="1" fragment="single">NIFKNVARKPPLTVCWSCHDKCIYKRLVKSKQKTYIGLRNFYMVNKLNDKVCLFPPKKLASKDNKMANCVICDKSKVSKNCQICGELVCNQCIREIPLLPEEFRLKTDEKRSNICNECSFKLCSDKYHLGTWYNSSLSLKKKILMDNNSSNVILKSDDLNKMQIQNFAKKTARFVAKNPFPKIDNGKCQICQNLSNFSSCSICSRYICDLCYGFYYLASPFSLETFSPLLCKDGSTKEHSISLKLVCFQCREIAFVIRNLFYPIIIGIGNNAKSVFVDNLKKKIIKIKTENLTKNSTEKCSFCKKLNKEKNVFQFCEICRTSNCPSHLDKVKLTDKNEKMSIFSICVECRYLIISKKFSFENENGETFSKEFSIEKTNSETINTDKRKIENADDNTKNIDKKSPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ23</accession>
    <name>A0ABV2AQ23_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003311</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001755">
        <property type="protein sequence ID" value="MES1921782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051438">
        <property type="entry name" value="RNF_E3_ubiq-protein_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46016:SF1">
        <property type="entry name" value="RING-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46016">
        <property type="entry name" value="ZINC FINGER, RING/FYVE/PHD-TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13923">
        <property type="entry name" value="zf-C3HC4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="2">
        <location>
            <begin position="20"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25789" checksum="2C2CE92F9EF8468E" modified="2025-10-08" version="1">MGIEENIFCHPNDIPVTLYCPVCLNIVLGPVVSKCGHLSCTDCMEQYLKHSNKCPKCRCDIDEKSLLFSKETQKQVSTFEVYCDPEPFKRCGWTGPYSELRNHLKKCPTISLEVPDKKFSINISSNEPDIDEIAKLNVEDIEKMSTKKLLKFSKDFGVSSENVLENKERVDKFIDSVYIPEMAKNFDMEHIPTKYLMRFLKLRSLNFVVKNFEPFQKLGKLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG3</accession>
    <name>A0ABV2AQG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003442</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001933">
        <property type="protein sequence ID" value="MES1921913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19924:SF26">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19924">
        <property type="entry name" value="UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="119"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="24695" checksum="3084E500C5703248" modified="2025-10-08" version="1" fragment="single">MTNFVTLDKFPNSTIGSVDDESDLYWKKFNTAFSLKRDEQINNLEFVNSKNDSTLVVSAGCDVILRKDGILDKELLISKFTREIRTSTLRKDSKLLAASGDEQNVKLIDPQNKQLLRKLEGHSDIVKKISFDSESLTNIASFSNDGNFWFWDIPRNKKIVKIKAHENGISDGFQCYENKHNWFTAGKSDSLIRGWDLRAPENFISFKTFFKIQVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI7</accession>
    <name>A0ABV2AQI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003261</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001689">
        <property type="protein sequence ID" value="MES1921731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="10322" checksum="7A4D007626C9104D" modified="2025-10-08" version="1">MPPFNKINLTNSGKLYQTNENRPSVKRIKRKLESADFINKPRRPFCYITDEVHEMAVILLKISKINKHLLMRQYKRKRGLLKIRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL8</accession>
    <name>A0ABV2AQL8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">28S ribosomal protein S6, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MRPS6</name>
        <name evidence="2" type="ORF">MHBO_003485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bS6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001992">
        <property type="protein sequence ID" value="MES1921960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd15465">
        <property type="entry name" value="bS6_mito"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000529">
        <property type="entry name" value="Ribosomal_bS6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035980">
        <property type="entry name" value="Ribosomal_bS6_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014717">
        <property type="entry name" value="Transl_elong_EF1B/ribsomal_bS6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21011">
        <property type="entry name" value="MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21011:SF1">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN BS6M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01250">
        <property type="entry name" value="Ribosomal_S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54995">
        <property type="entry name" value="Ribosomal protein S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13880" checksum="A64AF18A4FF9D196" modified="2025-10-08" version="1">MPTYQITMILRPSLQKETITKTIKKMAHVICPSGGVIQTVKNGGVRYLCDSMSRHGRRFREGLYLLATVDARPEVLRGVEKQMGEDESVLRWKSIKVFKVTKVQKFSSSETGSASSQKNFREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV5</accession>
    <name>A0ABV2AQV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PRMT5 TIM barrel domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003403</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001875">
        <property type="protein sequence ID" value="MES1921869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.150">
        <property type="entry name" value="Divalent-metal-dependent TIM barrel enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035247">
        <property type="entry name" value="PRMT5_TIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17285">
        <property type="entry name" value="PRMT5_TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRMT5 TIM barrel" evidence="1">
        <location>
            <begin position="71"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="26791" checksum="BD17573E728E52F1" modified="2025-10-08" version="1">MADQTLQIHVGVYLQSKLIDESIHFAKKNDCHFFAFDLIDDQSENEFILYSDKASDIYSWNNSVVGKLKPNFDQLDLQLKWASHLSIKYLLAWQINADILNFSRKIYKALIETPEFNGEIWIPFRIIKEDVSKSIDFFTLIPNQNNIFPVLLLDGDIDRERLDYWFSKNVRCLLIKTNQFETNEDGDPILSNFLTKTVLSFLEREINILIVSDDLNDQNDYVLKFCEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY4</accession>
    <name>A0ABV2AQY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003598</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002191">
        <property type="protein sequence ID" value="MES1922080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13625" checksum="C9134E28B2525DCD" modified="2025-10-08" version="1" fragment="single">FFLETIVTRKYTNILYRSKIFVIIKSKYYSNNKVLKYSSCNAKCKNGYFSVTSNEHKLSEMTIECSNEGKWDIPPTNQKEIDYIQCDLGCNYYGSQRGEDSYGMVVHCDDLGKILGLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ4</accession>
    <name>A0ABV2AQZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">FAD-binding FR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003603</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002194">
        <property type="protein sequence ID" value="MES1922085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.990.10">
        <property type="entry name" value="NADPH-cytochrome p450 Reductase, Chain A, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="entry name" value="Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003097">
        <property type="entry name" value="CysJ-like_FAD-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023173">
        <property type="entry name" value="NADPH_Cyt_P450_Rdtase_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19384:SF10">
        <property type="entry name" value="NADPH-DEPENDENT DIFLAVIN OXIDOREDUCTASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19384">
        <property type="entry name" value="NITRIC OXIDE SYNTHASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00667">
        <property type="entry name" value="FAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="Ferredoxin reductase-like, C-terminal NADP-linked domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="Riboflavin synthase domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="26749" checksum="8EF8FCCAE7FB3837" modified="2025-10-08" version="1">MLCFSKSKMETEKLKEFVSPEGIFELNKFCQQERRTFFEVIESFPSSIPPLEYIIEKIPPIKPRFFTISSSSLKSPKAEITAAIVDYKTPYKRMKVGVCSDYLQNLQRGDKVHALVTKGSFVKPKNFLGTPLIGIGPGTGLAPLKAMAEERYFSREKFEKMALFLGHRYRNKDYLYGKNYWPQYKRVFEHFSVAFSRESGLKKHYVTHDLKTNSKLIWNLINGGALVFISGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR79</accession>
    <name>A0ABV2AR79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Heat shock protein 60</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003702</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the chaperonin (HSP60) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002365">
        <property type="protein sequence ID" value="MES1922188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001844">
        <property type="entry name" value="Cpn60/GroEL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF000592">
        <property type="entry name" value="PRK00013.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF009487">
        <property type="entry name" value="PRK12849.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45633">
        <property type="entry name" value="60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00298">
        <property type="entry name" value="CHAPERONIN60"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="GroEL apical domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="358" mass="38168" checksum="ED7F57566074F779" modified="2025-10-08" version="1">MLSGVCQIANAVQVTLGPKGRNVAIDQSYGTCKITKDGVTVAKSIDLSDKMEDMGAQLIKKVASQTNESAGDGTTTATILAREIFVAGYKAVSSGANPVDVQRGINTAAKHAIKVLKQNAKKIDDKDLIQVATISANNDPHIGALITKAMNSVGTKGIISVNKGQKSEDSLEVVKGFKFDKGMSNAIFMTDAKSQKAVFEEPLILVVESKVSDYEGIVELLDHARSEGKALVIIADEVEGAALSTLVLNRLKSGLNCCAIKPPSFGDNRRDMLSDIALATGATFVTKESGISIKDLKPEMLGSCEKMEVTMESTLMIKGAGDKNAVKKRAEELKSRIGNSSGSEYETDVLKRRLGFFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC5</accession>
    <name>A0ABV2ARC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003709</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002375">
        <property type="protein sequence ID" value="MES1922197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="330" mass="38718" checksum="7B85E3B224DD4F00" modified="2025-10-08" version="1" fragment="single">MAKTEEKQIVKFRDETSLLCSQIHRKCLECLFQQYSLLPDNKIALMRTLRTVFFLHSPIHCDLHCPNSTTGLRNSDVPRSINIDWIKTKKREFLKVLARRLEVKILRRAVKNIFLSWCVTKKQEKGLSSNISCRKFKAFFTFSDITSVALLARNMFLAREKQNRLDRLKGKPVKAFTMSQFYDSADPNLMVNMGHLEDREKILIAAGADVDLTEEAHMFVFEDMLAVLKSKEIVRDVFLPQLYDKDTKVFFDKYYNALEGQRHFNFKMFWSPLTDERVDEICTAEKQRDGDFVWGKISIKGRRKSMEDELTVFRNYSDMLPGNLKSYKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL0</accession>
    <name>A0ABV2ARL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003831</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002586">
        <property type="protein sequence ID" value="MES1922323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19786" checksum="33E78A59A6746C8A" modified="2025-10-08" version="1">MKHLIIVFTDKYRLEVLDEITIEQYLRSLRPGNTLETLLNAVDSRYINIGYSKDFDNPARKSEVLKILDFVLKIKENRGFATTYLKGKAEEIYKQIVKVKIEKQQERMKQTTDTNSHFQNFRDDARKKFLDYYLDVAVDTFIRVFQGSDAKFMYEILSLIHSIVEEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP3</accession>
    <name>A0ABV2ARP3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Structural maintenance of chromosomes protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SMC2</name>
        <name evidence="3" type="ORF">MHBO_003843</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002605">
        <property type="protein sequence ID" value="MES1922336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036277">
        <property type="entry name" value="SMC_hinge_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43977">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75553">
        <property type="entry name" value="Smc hinge domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="272"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="62"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="118"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="292" mass="33641" checksum="A974CABAB58C1DDF" modified="2025-10-08" version="1" fragment="single">MEFVFGSTLICPNLETAKIVAFELQKRVRAVTLDGELFEPHGTLSGGSKTRSKSLLLSLQHNNALQNSILKLKKNLGALDEKAENLKKSNSFETKTEKLQLMEHQFLSSIRRNKNLRGIELKEEIQSTEKEIHILQKSKNEMSEKLSELSRLIEDLSEKSALDDNSNRDMKSLRAEFLRNEDELPRLRRRVEEAAMEERTAKEEIAKTEEAKTQNLANLAKFENEIEQIGKSIARFEDERETARADLERANSEIAFLSKRIAAENREIARAEAKKEEKRIESKKVQNELNRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP7</accession>
    <name>A0ABV2ARP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Serine/threonine-protein kinase</fullName>
            <ecNumber evidence="8">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">SCH9</name>
        <name evidence="8" type="ORF">MHBO_003670</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010002294">
        <property type="protein sequence ID" value="MES1922154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000961">
        <property type="entry name" value="AGC-kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00133">
        <property type="entry name" value="S_TK_X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51285">
        <property type="entry name" value="AGC_KINASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="AGC-kinase C-terminal" evidence="7">
        <location>
            <begin position="150"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24405" checksum="CCFD5CD6FFD403EF" modified="2025-10-08" version="1">MALGHLHKNGIIYRDLKPENVLFDENGHICLTDFGMSKIFRKGETCAKSICGTAEYLAPEMIEGKEYTHTIDWWTLGVLLYELMVGKSPFKSVGRNQIERQIIDKKVEFPPKMSKSAVDLITKLLEKDPSKRLGSGPSDCSEIMSHKFFEGVDWYRLLMRKISPPYKPKMGSEKDDTSNFYREFTEESLAESKMSAKGYFAHFANFSFCDVDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ3</accession>
    <name>A0ABV2ARZ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">U-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002427">
        <property type="protein sequence ID" value="MES1922226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16663">
        <property type="entry name" value="RING-Ubox_PPIL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016818">
        <property type="entry name" value="NOSIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026951">
        <property type="entry name" value="PPIL2_U-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13063">
        <property type="entry name" value="ENOS INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13063:SF10">
        <property type="entry name" value="NITRIC OXIDE SYNTHASE-INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04641">
        <property type="entry name" value="Rtf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="U-box" evidence="1">
        <location>
            <begin position="34"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="24717" checksum="3F778BAEC6F9E9A2" modified="2025-10-08" version="1" fragment="single">MGKNQHQQDRMHITSTEWRRDFGGFKEKRVPRVLPLSFDCCSISLLPFKSPVCTTDGNVFDKTNIREYIDKFGKCPVTGKSLKKKDLIKLNFSKNEKGKLHCPLTFRVFNDNSYIVAIKTSGNVFSHEAVEKLNIKPKFWEDVLDGTKFRKEDIITLQNPNKIEMRAIENFDHVIKKLVLDKEKTKKISNLAVKNVVDKINSENVKFTGTRLPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS97</accession>
    <name>A0ABV2AS97_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF7164 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004063</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003069">
        <property type="protein sequence ID" value="MES1922548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055588">
        <property type="entry name" value="DUF7164"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23741">
        <property type="entry name" value="DUF7164"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF7164" evidence="1">
        <location>
            <begin position="14"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF23741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15522" checksum="E0F52AB80C33E969" modified="2025-10-08" version="1">MEILKYILKEFDLRSTKGKWPGWYRGVSSMYAIEIGVNFALADGICEKNGKFLDHSSTNGKVSETAHIHCWHTFDMFSKFEFLNGKYEQHKRVKIKNSERINFYCLKIALGQFSRGGEIVDSKEYAQMLFEDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF9</accession>
    <name>A0ABV2ASF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004128</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CDC50/LEM3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003219">
        <property type="protein sequence ID" value="MES1922610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005045">
        <property type="entry name" value="CDC50/LEM3_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10926:SF0">
        <property type="entry name" value="CDC50, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10926">
        <property type="entry name" value="CELL CYCLE CONTROL PROTEIN 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03381">
        <property type="entry name" value="CDC50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046749993" evidence="6">
        <location>
            <begin position="22"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20065" checksum="34146FE049543E51" modified="2025-10-08" version="1" fragment="single">MGILAGLFIIHLLILIVLLSTKNVIEQSIRYDNMTNCNIGFNEPDYGKICNFKMRINKRMQLPIYLYYQITDFYQNHYLYKSSFSAVLEEGKLKDSYPKCHPLETLDDKIIYPCGLLPTSIFSDKITLSQETGGRTLKVELIKNGISWKIDREGKKNMNVTTTSFQNKFTRMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST9</accession>
    <name>A0ABV2AST9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004269</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003562">
        <property type="protein sequence ID" value="MES1922746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6828" checksum="CA90B42D1E63814E" modified="2025-10-08" version="1">MTDSISKRKVKLMNKYDELKSEEEIDEIKMKNNENFEKIGKNKNHFVYGVNGLVDFST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX1</accession>
    <name>A0ABV2ASX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004089</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003120">
        <property type="protein sequence ID" value="MES1922574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027652">
        <property type="entry name" value="PRP8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11140">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR PRP8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11140:SF0">
        <property type="entry name" value="PRE-MRNA-PROCESSING-SPLICING FACTOR 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8645" checksum="D269F9C0255FBB93" modified="2025-10-08" version="1">MTFEASAINGTVSKNDEENTVQKIKKQLDLKSKHWERLCKNRFAKKRKIGFVQSEKTFMPPEHVRKIVKDHGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY9</accession>
    <name>A0ABV2ASY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Bromo domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004314</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003727">
        <property type="protein sequence ID" value="MES1922790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="219" mass="25417" checksum="456662F46A5D4F3F" modified="2025-10-08" version="1">MFTKTFLSSLPRFKSGTLKKAPSNLKKLPQIAQLVKPTKPPKAFLKPHPEATSVNHLQGFFVHQDKYFYLTDGGVVYYHDGTRPLLMHATQFRKRLMRNFYAAKNMSKRGGGVYGEVLAHWSQYKHFVEEAGSVNAEVRHELRGIDYYDDVSDLSERVKSAIKKLIGGDKTYFERKIKEFEVLLTNAFFLRQNKILPSDFENLKKFFCFVKISFVFFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT40</accession>
    <name>A0ABV2AT40_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004367</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003854">
        <property type="protein sequence ID" value="MES1922840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1112">
        <property type="entry name" value="COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="19"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="129"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="139"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="175"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="214" mass="21313" checksum="0CD4765C90279868" modified="2025-10-08" version="1">MSYYNYEQYYENGAKRKVPLSKKDCSGTPGPIGCRGPTGPAGKRGFEGPEGDDGHIGCLGPRGETGLKGPPGECGQRGRPGEQGKEGLKGSCGKRGETGCPGFLGEPGLRGPIGPQGETIVGPEGPRGAPGETGTPGKPGFPGPPGPPGEYIPGAPGDYGQQGNIGPAGDQGNPGLPPPPPAPPIPGPPGPPGPPGPPGELNANSVDVKLKKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT81</accession>
    <name>A0ABV2AT81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003913">
        <property type="protein sequence ID" value="MES1922862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10164" checksum="7B35708F78C662C8" modified="2025-10-08" version="1">MLSKKLGTDVSYFFPASSGEDKTAKVQDKGVTINIPSVDPKNAKDLFTLISEFSRIKDKGVRKKFLTLISSFADNEDGNIDEKIDESSESDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA4</accession>
    <name>A0ABV2ATA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004179</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003352">
        <property type="protein sequence ID" value="MES1922661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13746" checksum="514997CD51F592A3" modified="2025-10-08" version="1">MMKRAMDKSKVKVLNPGEWHIPLIKEEELDIPLHLKLKLSAARCARISYGMNTRITEPDMKKDLELYKRLVESDPMHASCTEHQARATSDKRFHRNHRSFNPYRVFIEGNVDITELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC9</accession>
    <name>A0ABV2ATC9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004059">
        <property type="protein sequence ID" value="MES1922925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="7327" checksum="CED67DF7B8EE5627" modified="2025-10-08" version="1">MMLKAVTVKVLSRADVHDTGSPFLRSYLNHIITQDFYHFCRALCKGTVNTYFQCPWFDAEPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF0</accession>
    <name>A0ABV2ATF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004094">
        <property type="protein sequence ID" value="MES1922939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6968" checksum="475AF33DFF69DFC3" modified="2025-10-08" version="1">MLMQKKEEVIEKNARLKRKALSMKELEDIVKKKTDDEKTKKKSVSAQITNSSLKNVFKTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK1</accession>
    <name>A0ABV2ATK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004291">
        <property type="protein sequence ID" value="MES1922998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14843" checksum="06B28002ACEE3E39" modified="2025-10-08" version="1">MKNWIRKQLDQLRIERKGRKINMSNFFIKMADRWETISNPASRTQLIANAKRAEHLRKNYVYTDKDIKEMKKMAEEAPAKSVINVNRELCEIKGKINSAKKSGDEKLFLQLRNKERELKNLSHKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN6</accession>
    <name>A0ABV2ATN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004559</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004400">
        <property type="protein sequence ID" value="MES1923025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="10707" checksum="43FEBCF028F41461" modified="2025-10-08" version="1">MLIILQFKSSLITSNSARTGSYIALDALCREGDRKGGINVPIDVTTSKDGVNLIQGDVSFSWLIYPIPKCISLTPQERSFHTVQSCMYFIDFEASVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX5</accession>
    <name>A0ABV2ATX5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004382</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003894">
        <property type="protein sequence ID" value="MES1922853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046042983" evidence="1">
        <location>
            <begin position="17"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="27584" checksum="801CCFF580D066E4" modified="2025-10-08" version="1" fragment="single">MLDFLVAALICVTANIVPLPSFLTQKINYKTHLAFEEAISTFKLLLIAFSNPASGKSAILLSHIESKLTNLEETRIVLIKESKHLWVECLFDLDFYLQKLVLFKIVNNITLFLRCLFLLVSEQVTFSSSKLTGKMAVSIGEFIKVLEIYAVETVNCCETRRATVKDETRFRMKEGLDELWSTFRNMRYRSLYSENADVRLASPKHLLLDFSMFCVSNVFYSFTLLDQLSSEMQGVQSNWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX8</accession>
    <name>A0ABV2ATX8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004643</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004683">
        <property type="protein sequence ID" value="MES1923102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12468" checksum="4B9A8C208F00EB37" modified="2025-10-08" version="1">MTKDYNITKWRCSLGSIIFDIDFADRESFLKFQKDMKDGDLKKKLLEVIVFEPLMEQLECDLEKKDFCLSLEDVQENRESLGDLIVLKRKINKYLNITLTNEKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ6</accession>
    <name>A0ABV2ATZ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phospholipid/glycerol acyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004692</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004888">
        <property type="protein sequence ID" value="MES1923148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07989">
        <property type="entry name" value="LPLAT_AGPAT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10434">
        <property type="entry name" value="1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10434:SF11">
        <property type="entry name" value="1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69593">
        <property type="entry name" value="Glycerol-3-phosphate (1)-acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047340076" description="Phospholipid/glycerol acyltransferase domain-containing protein" evidence="3">
        <location>
            <begin position="19"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="Phospholipid/glycerol acyltransferase" evidence="4">
        <location>
            <begin position="89"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="22667" checksum="11B1F86D786036C7" modified="2025-10-08" version="1" fragment="single">LALTAWTISLIIQLLIHSTPFIEKSKKEKYSSIVFRKISLFILIDCNPFWNLRLIGERPPKEAFKSPKIVVVAHIKIRIKFVKIENKKFNHKSNIDAVLVARFIPPEVRYIAKHVLFKFPIGGTNMTLAGDIPVVLKNKNGTFYVEEKDKIKLTDRSVKFLENGGSLVIFPEGKRIRTNELGKFKDGAFIFAQKSGADI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB8</accession>
    <name>A0ABV2AUB8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Rho GTPase activating protein 39</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ARHGAP39</name>
        <name evidence="2" type="ORF">MHBO_004795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005297">
        <property type="protein sequence ID" value="MES1923250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00159">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45808">
        <property type="entry name" value="RHO GTPASE-ACTIVATING PROTEIN 68F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45808:SF2">
        <property type="entry name" value="RHO GTPASE-ACTIVATING PROTEIN 68F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00324">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15358" checksum="2161C2E3D7051587" modified="2025-10-08" version="1">MTLEELMQLTENMHRDFPKIIEDCCDAIERKNGFKTQGIFRISCRSEELKRAIDNANSGNYDFAEFESPHVPAVFLKTLFKEMREPVIPNQIVDECAQFGSTNGKENSLTSKTEFEMILKKVLKYFCLLKFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC3</accession>
    <name>A0ABV2AUC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004808</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005362">
        <property type="protein sequence ID" value="MES1923263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="10686" checksum="7D893171C70A21FA" modified="2025-10-08" version="1" fragment="single">SKSFSGAIQLILFKFCQNLIATDDFNRKNKISLQAFWLSISPAASLLSRLKKLCENILIEEKNSKTGTALVSGGLLFNKAYNCFVNEGFLNKSFCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC7</accession>
    <name>A0ABV2AUC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004519</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004253">
        <property type="protein sequence ID" value="MES1922987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16495" checksum="0E388D4DAF3CCB13" modified="2025-10-08" version="1">MLRFKLSKITKVAVRPYFAKPKTISTPLLKKSIRTFSFGKNQFDIYYEMKKLLLRLKTFWWCLSPFAKGIVYTISFLTFMYLFGSILLKLILIVGIGAFILRYFPKQKYYIQKQFFRFINRRATSHFLKTLFENIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ5</accession>
    <name>A0ABV2AUJ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA polymerase theta-like helix-turn-helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004878</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="5.6.2.4"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005619">
        <property type="protein sequence ID" value="MES1923323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3380.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050474">
        <property type="entry name" value="Hel308_SKI2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046931">
        <property type="entry name" value="HTH_61"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47961">
        <property type="entry name" value="DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47961:SF6">
        <property type="entry name" value="DNA-DIRECTED DNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20470">
        <property type="entry name" value="HTH_61"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA polymerase theta-like helix-turn-helix" evidence="6">
        <location>
            <begin position="16"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF20470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18135" checksum="B8D4A59773FF03CA" modified="2025-10-08" version="1" fragment="single">QMSGRAGRQNIDKDGVSILMLHKNEKRRLIEMLKKPMKPLTSCLKESESAMQKILVEAIVTEIASDCEQIYKFVSKTLFFAQEEYSIVHKCTKNALKFLAENNFIKWDDGQKKYKATYLGNAAFFSSIEPKIAIELFKNLDNASNFIILSNPLYILFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR2</accession>
    <name>A0ABV2AUR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004972</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006036">
        <property type="protein sequence ID" value="MES1923406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9085" checksum="36615ECE7DAA04DE" modified="2025-10-08" version="1">MFSVDDVSAEGFMIDTFWADSVSAGKKTNSDFSFLKASLEENGIDELEEIELKLKVYDEDHCMSGFSYEETITVNLKEQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV28</accession>
    <name>A0ABV2AV28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004788</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005259">
        <property type="protein sequence ID" value="MES1923243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12703" checksum="5524C9DFEC7BC854" modified="2025-10-08" version="1">MKISNNLFKEIPYTKNIISQKITILKSNVYIPKTKRRIMKRTPMIEVSKKLFMEISKNLFIKIPIKMVVENAHKSKNLLRTESDVNNVQQYEEKNQMLIIKKRTIPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV50</accession>
    <name>A0ABV2AV50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005123</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006701">
        <property type="protein sequence ID" value="MES1923535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9225" checksum="3E9D3E590453EAC7" modified="2025-10-08" version="1">MQFRKTANKKVVDLGFLKGYTRKSQVLFKILKPFWVPYLEKSFIYVNHTLCGEKKLAQPLHPPLKNLYFTGMHFVHDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG4</accession>
    <name>A0ABV2AVG4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004996</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006154">
        <property type="protein sequence ID" value="MES1923426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="24"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="10837" checksum="C3E971EDEDDCB03E" modified="2025-10-08" version="1">MLSDWSGRREFSGFREEQSSPRKLATVERELRVTKELISRIMEKEDELIKDSIELKIYKEYQSAQKENNEIKHSVEELKKENETLKSKCSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW84</accession>
    <name>A0ABV2AW84_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">USP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005256</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007375">
        <property type="protein sequence ID" value="MES1923639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15132" checksum="FB0624BCC3CE475D" modified="2025-10-08" version="1" fragment="single">NEHKHTDSDSLHELKKLANEYWSGQYLVIRPENIINKIQDSNPVFVPWEQQDAHEFLLTTLTMLHEETMIVIKEDMEPIDKINQEIKILQNLCERFSKIQITGGRDLSAIVNFYRHDSKDNKINEKSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE47</accession>
    <name>A0ABV2AE47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">WD repeat-containing protein 70</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">WDR70</name>
        <name evidence="2" type="ORF">MHBO_000038</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="16"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11403" checksum="661F1987B8CCD328" modified="2025-10-08" version="1">MTETREFKLNQYTEIEQIHNKLVTAATVDPSGSRLATSSLDYSVKLWSFSGFGLTSRDAEKSKILSKSRSRRRDRNPVSSMEFFGQSVARLPGYKHRICL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE63</accession>
    <name>A0ABV2AE63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21204" checksum="3AE503228AC17441" modified="2025-10-08" version="1">MKLTTKQNIVRCLTTKAEEGGVKYNPRAGVSLASIRNWFYSNSIASKENNGFKTLFRKAIDNLTQLNCLEKVTVQRYKVNREKLKAFQNSSTTLGKRTVAKKVASAKKKKVVKRDTKKTKSSSIKKKSRVVKKIIKKKSAAKSPARKRMTVKKVKKTRRATPKKKTVRKKRFKKPEFFNTIYKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEK1</accession>
    <name>A0ABV2AEK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000154</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045571091" evidence="1">
        <location>
            <begin position="27"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6783" checksum="21BDC575C5D33359" modified="2025-10-08" version="1">MSEAFLRAMQFHGLAFFAPLLAMLEANLEPFATYTPRAASVVSDKELKAAKDEAKDIVVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEL4</accession>
    <name>A0ABV2AEL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000146</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045885986" evidence="1">
        <location>
            <begin position="23"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13301" checksum="8AD37AE903A636C2" modified="2025-10-08" version="1">MSILIILATYLLTISCKKQTECSPICKKNSCENLKGQTINVHSKCRLCDSDDECNPKADDYYNCVSLCRNHDCKELEEVGANIQSCYDCSLKEHKCNKETGAKKPSVGNKFGNFLSSHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEQ6</accession>
    <name>A0ABV2AEQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000187</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000024">
        <property type="protein sequence ID" value="MES1918176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11282" checksum="BA62803CC9D9CC64" modified="2025-10-08" version="1">MDSFYKSAVSVTDLNNFIKTAKKRAEKRCAVFTVLKEVLELSAFCPNRQEVAVTVISKFIDGKCLSRLNKDAEAAGTEHLEKAKKAFSALFELILKILEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEX2</accession>
    <name>A0ABV2AEX2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transcription initiation factor IIF subunit alpha</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000058</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="164"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="176"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="192"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="211"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="263"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="359" mass="41669" checksum="52903C5649A11531" modified="2025-10-08" version="1">MENIPNQISIPLYRKHMDDPGKHSIVAKFSGPKNVETAKAALKIQKQRVFKEEENLANKRKRLPPIRRLKRDPGLILTDGNGFDYVGESQSSKYSFVVLEQDENLRFCCYPVVPYKFIRSEFKNSTNDSIANNDFKKSDNFVPAKKTKLMNALEKSTSFEPKNELFYDEADFPQNRNDDENEKTGDFYKEQSDDEGQFDEQPIETSNPFEGYEKESRNPETREEETEKKRIIELLQGKTNKATRKREEESILTDISEDSNQSEEERSLSKEKKSIRSDATKSISEMNVVKVIVENPKIGSIELVRKFGIEPNDKTQKKSLVEAVKKVAIMKEQNGRKYFEIKKKFQRLYEMSNGDELVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEZ3</accession>
    <name>A0ABV2AEZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">VIP2</name>
        <name evidence="5" type="ORF">MHBO_000257</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CNOT2/3/5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000034">
        <property type="protein sequence ID" value="MES1918266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.1020">
        <property type="entry name" value="CCR4-NOT complex subunit 2/3/5, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038635">
        <property type="entry name" value="CCR4-NOT_su2/3/5_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040168">
        <property type="entry name" value="Not2/3/5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007282">
        <property type="entry name" value="NOT2/3/5_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23326">
        <property type="entry name" value="CCR4 NOT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04153">
        <property type="entry name" value="NOT2_3_5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NOT2/NOT3/NOT5 C-terminal" evidence="4">
        <location>
            <begin position="81"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="24347" checksum="F0F69EE2808BF01F" modified="2025-10-08" version="1">MSKISFYRKTLTINKLFYYMTGLPPYKFGMSEELNSTEYGIKAFEELSSTNQKGLKICLFGQQLEEVFLPEELKTFKYEDFAGPFINEETKKNSFTLPYCYYSRQQSLKTSTFQKLPLKTLFYIFYDMPRDQLQYYAAMELYKRNWRYHKKLQKWYHYEAKSLTWNTFDLDNWKVSKSASKVDSNFNANFAKLQEITDSVSMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF22</accession>
    <name>A0ABV2AF22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000079</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039189">
        <property type="entry name" value="Fcp1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004274">
        <property type="entry name" value="FCP1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23081">
        <property type="entry name" value="RNA POLYMERASE II CTD PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23081:SF36">
        <property type="entry name" value="RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03031">
        <property type="entry name" value="NIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50969">
        <property type="entry name" value="FCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FCP1 homology" evidence="7">
        <location>
            <begin position="38"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12124" checksum="80217F89C2EE1C36" modified="2025-10-08" version="1">MQESDYSLSREAFVSSGYGSHQKSVQHQMKILTDHYLHQSKKLVLVLDIDHTLLHTTKNPHADIAFKRKELSDDIFMVSLNQSNGDGDVTYYVKLRPHLKLNQQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFC1</accession>
    <name>A0ABV2AFC1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">SAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000361</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000053">
        <property type="protein sequence ID" value="MES1918390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09487">
        <property type="entry name" value="SAM_superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001660">
        <property type="entry name" value="SAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052268">
        <property type="entry name" value="SAM_domain-containing_protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20843:SF0">
        <property type="entry name" value="PROTEIN AVEUGLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20843">
        <property type="entry name" value="STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07647">
        <property type="entry name" value="SAM_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00454">
        <property type="entry name" value="SAM"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47769">
        <property type="entry name" value="SAM/Pointed domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50105">
        <property type="entry name" value="SAM_DOMAIN"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SAM" evidence="3">
        <location>
            <begin position="106"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="SAM" evidence="3">
        <location>
            <begin position="245"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="SAM" evidence="3">
        <location>
            <begin position="749"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="domain" description="SAM" evidence="3">
        <location>
            <begin position="837"/>
            <end position="903"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="4">
        <location>
            <begin position="978"/>
            <end position="1000"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="4">
        <location>
            <begin position="1002"/>
            <end position="1029"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="374"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="616"/>
            <end position="671"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="945"/>
            <end position="970"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="383"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="402"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="660"/>
            <end position="670"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1076" mass="123506" checksum="4018A43964676B09" modified="2025-10-08" version="1">MATTQQQTTDSRPVQTFWHPLPQSFWGRNRIAAWLLLSDFASPHAHTFHENGIDYAAFVKLDENALVALKVHSSLCRTKLSRIIAQVRNLPPTKPRLARKNSAPMWTKENVLDWLDSLSFGWRFIPRFQQLAIDGKKLVRLGPKSLAILIGVDSRPLAKRYVLAINSLSKSGNWRHIVDTDFDIELSSPDASLGFFSTAYVVSAGLKSAGAKLNEAFFPFNMKQINLAMFTYKDAFLRKKKRNSMEAKEVALWLRHMGYENEVVETFRRNGVDGVQLFDLEEEDIRGELGIRDPQNCLRLLCDINFLREEMGKLFNISTLLRLYKENYKKILKKQRAKHSQQIAIYKESAFETMKEFEPFLDILGLSKTYPDTFPDKHGAKENRRRRSTRRSTAPKKRGNEFHQSNESGSTEENQIAKNEHFFRNILKKNAFRKNTNRSLFKDAFVREWVSKNEISRVYKDCFASFTEKDLLESTEDQLSKRCGLPPTEMREVMAAVDQFRIENFRRRLKDSASKPNEFPKRTTKNSARNRNFAAEEAFYPSKNGGFGKPVKNDRYNALKTPLPFYHADEFRAGARSSSANIPNAARSGFRNMAQKRFKRMGTETKRLSDFLAVQRKDKTNGSANGAVASRSSEKNFARSPEIAKWNPRAQSLKSEEKVPPPPPNDPRPPFDVGKWSNSHVFSYLKNISELRPFLQSLRNLNGRSLLDIAGRKSFGAQKNFDLKCLSVLKGVSKALSYRDLQNTAVETWTPSNVQSWFEIDTDLPKYGELFRQKNISGRLLVQLTHEMLLGDLGINLAERERILVSVQKLISKAKPQINLPQTGSNNEHNLLPLSMWTRNEVQSWLLSLKNFGKLYLENFAKKAANGNNLMFVTDATLAEEYLVPIAIHRRQMLQSLNNYKTAPETTEENCKTDQSYPIRSLESFSESFEDYDMHFPLSKRKPMRRFGAKTPAKTPSTNDENDQKNVKENTNPNEILIECSFCRKRFENTDLLISHLSIHEKSCSICAESFGTNEQLDKHMAVHFKKDTKLNEFIFGNSSEMSENRLSKNKLVDNLFGEKKNDQVVQESDVGELKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL2</accession>
    <name>A0ABV2AFL2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Kinesin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000433</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000067">
        <property type="protein sequence ID" value="MES1918468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.720.30">
        <property type="entry name" value="SAP domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027640">
        <property type="entry name" value="Kinesin-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001752">
        <property type="entry name" value="Kinesin_motor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003034">
        <property type="entry name" value="SAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036361">
        <property type="entry name" value="SAP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24115:SF1008">
        <property type="entry name" value="KINESIN-LIKE PROTEIN SUBITO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24115">
        <property type="entry name" value="KINESIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00225">
        <property type="entry name" value="Kinesin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02037">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00380">
        <property type="entry name" value="KINESINHEAVY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00129">
        <property type="entry name" value="KISc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00513">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68906">
        <property type="entry name" value="SAP domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50067">
        <property type="entry name" value="KINESIN_MOTOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50800">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0493">Microtubule</keyword>
    <keyword evidence="4 5" id="KW-0505">Motor protein</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinesin motor" evidence="8">
        <location>
            <begin position="8"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="domain" description="SAP" evidence="9">
        <location>
            <begin position="612"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="253"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="498"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="91"/>
            <end position="98"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="675" mass="77826" checksum="B8FDD2928DB6B568" modified="2025-10-08" version="1">MSKPKMQPLDVIIRFRSSPFWDKFFSIEGNNVIYKSYQQTFNNKISEKERKVKFSNVFGPDISQNKLYESIGKTLLKNFFNGENGLVFAYGITGSGKTYSVEGDNGNEGILPRLLSDVLTNYEKNDEDYNEKGDVVISYAEIYQEKAYDLFSAEKDSLKPLKVVTQNGESTISNLTHIKISDIKNALKIYEKGNKTKHLSSTSFNSRSSRSHTIFTIKFVPKIFDCTSSDPQNTRHFSSICVADLAGAEKSTDLNQTNSQNIDSDQINNENANPESLFDESTKINGSLLVLGKVLTDLRWNQQNSKKLQRVISWRGTTITRLLQNYLIGGGKCFMVVCVWVTPETLNPTLRVMEYGSIASSISTEQKTKNSKITKNIEKLVEEKFSAETKMLIKHGICSEKMFERVQEKIPSVLIQVLNFNHAKYQRSLNFINRRNKERLKMERKLVWNCALKQIVKMSRKYFLYKKSRKEKMKRINEKYDNKVNAEKYKNSSFKMVINELEEKVLVHKLEIQKLLKENSSLKRQTRRLSRSSNGIIKEENVIKSANTVKKEKFQLRVKRKKSIKSVRHKRLTERLIKKENAAKQAKNEIVSGLIKRDKFEFKEATLSKDGFYSVTVQTLKRILRNLDLRVGGVKADLIDRLWGAVSSDNNGDKKDIVVKMMDEDIRKGRGRQRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM8</accession>
    <name>A0ABV2AFM8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 5">Glucose-6-phosphate isomerase</fullName>
            <ecNumber evidence="1 5">5.3.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000441</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11816"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:58225"/>
            <dbReference type="EC" id="5.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 2/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the GPI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.9" evidence="1 5"/>
    <dbReference type="EMBL" id="JBDODL010000068">
        <property type="protein sequence ID" value="MES1918476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05016">
        <property type="entry name" value="SIS_PGI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10490">
        <property type="entry name" value="Glucose-6-phosphate isomerase like protein, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00473">
        <property type="entry name" value="G6P_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001672">
        <property type="entry name" value="G6P_Isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023096">
        <property type="entry name" value="G6P_Isomerase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018189">
        <property type="entry name" value="Phosphoglucose_isomerase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035482">
        <property type="entry name" value="SIS_PGI_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11469">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11469:SF1">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00342">
        <property type="entry name" value="PGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00662">
        <property type="entry name" value="G6PISOMERASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SIS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00765">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00174">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51463">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="3 5" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="4 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011952"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="369" mass="41556" checksum="430D380890A422EB" modified="2025-10-08" version="1" fragment="single">EKTERIKIKFLANVDPLAFKMAVKDIDANNTIAIIVSKTFTTSETMRNAKIIKNWFKQSTNKQDLRKHLFAVSSNLGKCADFGIPTEHVISMWEWVGGRFSVTSAVGVLPLSIAFGFDHILEFLRGARSMDLHFKNTSFDKNIPVLMALIGFWNSAYLKYSAHAIIPYSEALKRFPAHIQQVDMESNGKNTTLDSKNILETGEIVFGEPGTNAQHSFFQLLHQGRVVPIDLIGFCNCCADVNLSKKDVSSHEELMCNFFAQADALALGKESKWQHKKFDGNRPSLSLLFRNQSPYSIGQLISLYEHRIAAQGFLLDINSFDQFGVQLGKDLCKNVREKMAKLKFGEETDFAGMSKSVSSLIRHFVNERD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP7</accession>
    <name>A0ABV2AFP7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000068">
        <property type="protein sequence ID" value="MES1918475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="113" mass="13158" checksum="F295CB07A7C4273F" modified="2025-10-08" version="1">MECSIPTTFKENIQIVYQEENNFVGSEIKVKVVCEGKKDVYYYGNRLTKAFFMVCGTNGEYGGFEDEKLNFETIWCGPNYWRTLWLVLFGAFLLFMVTVTCVVYGFIVLFSKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX4</accession>
    <name>A0ABV2AFX4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ATP-dependent DNA helicase</fullName>
            <ecNumber evidence="10">5.6.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_005294</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>Couples ATP hydrolysis with the unwinding of duplex DNA by translocating in the 3'-5' direction.</text>
            <dbReference type="EC" id="5.6.2.4"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the helicase family. RecQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.4" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17920">
        <property type="entry name" value="DEXHc_RecQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18794">
        <property type="entry name" value="SF2_C_RecQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004589">
        <property type="entry name" value="DNA_helicase_ATP-dep_RecQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032284">
        <property type="entry name" value="RecQ_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00614">
        <property type="entry name" value="recQ_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13710:SF105">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE Q1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13710">
        <property type="entry name" value="DNA HELICASE RECQ FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16124">
        <property type="entry name" value="RecQ_Zn_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="4 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="12">
        <location>
            <begin position="183"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="13">
        <location>
            <begin position="385"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="14"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00034617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU364117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1918278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="678" mass="76401" checksum="3588CD69EC38E7B3" modified="2025-10-08" version="1">MEKDDFDMAFKLQLKEITENLKSTDCEISKLQKQSNQYTQKIKHFRNLKKEIESKISILLNRKLKSQQIKAQLDPDNPFAKLQDFSTCKNSSQKAIKDKTQIKQINLHFAKINDLQKTKSPINKEKTQDFIARKNSAANTNILTKTKKVKLSEKTTDQTEKRLESVKELFGIESYRKNQLEAIRATLRGEDCFILMATGSGKSLCFQIPAAIEGGLTVVVSPLISLMNDQILQMDRIGLESRMLNSATSKEEAAEIFEDVQDANGALRILYFTPEKIKSSRLQSALKKCYQNNRLNRIVIDEAHCCSNWGFDFRPDYFRLGQLRDLFPGSPIMALTATATKKVFQDVKRILKFRRCSVYSSSLDRPNIFYAVLRKPPIFEDAAKLLENFIGKQPPGSPGIVYCATRSDCEKIDGLLNRHGVRASAYHSGIDHSSKTKIFEQWMSEKILVIVATTAFGMGINKDNVRFVVHFTLPQSLEALYQESGRAGRDGQPAVAALMYSPLDVITIAKISSKMTPILSLVQYAHSTKCRRVKILEPFESGCADQSSSEKIRCDKNCDSCASKQSDSFRALEYSSFGGKAIDLVKIIKARKTQNKNLTLKQLVKTWRGNGKKSLNGKGIVFLEKGNLKSGEAEQMVLDFVCEGVLALVLKHTAYCTNVYVSIGPKGNQMLFKDRKLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGA4</accession>
    <name>A0ABV2AGA4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Mif2/CENP-C cupin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000468</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000073">
        <property type="protein sequence ID" value="MES1918504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025974">
        <property type="entry name" value="Mif2/CENP-C_cupin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11699">
        <property type="entry name" value="CENP-C_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mif2/CENP-C cupin" evidence="2">
        <location>
            <begin position="685"/>
            <end position="765"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="188"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="317"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="418"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="517"/>
            <end position="557"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="600"/>
            <end position="621"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="192"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="226"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="283"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="326"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="418"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="466"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="533"/>
            <end position="555"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="770" mass="87137" checksum="A3376ED70486748D" modified="2025-10-08" version="1">MSDLHANTSTIFKQSLNRITNFLNSSQNEFLGSEEELLDLNKSGLSEDNEEKEVDFLDGLLYSNEEEDSVNAEVETDDKENSSLIYDNDIIFPPLLSREIKIAEKPKLANAKLSTPLSNQKNSFEESSSSPDYVRTRESNRVKDYKKLKTNLYATAKAPEKIDILPNDKTAQIKEKLDELGEEINKIEKEHTAKKHKSKAPAKKSRGRPRKSKRLLPPKNQISSTKKPEDVNIRKGTEELKRTPKAKTRKAVNIGIVSPILSLKTFKSRHFKDSIKKSSENKLDEEDPNFNDEAFDMNEGDLDVQIKPKKSLKERIEITSEENRTSKPKNRTKKNKRIQSKIVTMDETESAAMSGKRRSIRNKRSPLKWWIGEKVKWTKGENGLPVANGYVIFNERNKIKKTEKQSVVPGKHKIVGKKVTKVASRKNGPKKHLPEKIVIGNKDDGDFGETDIVENVNPDNDSVPSKAKRPRAKTKSAKSLKKRLGRKRRAITFESSVRLKRKKIAPKLIAPVKKVLKKKTGKNKTKQFIASDKHRKAKKFPNKRRSEKKKLKKSAIKGDSDIGGYNVAKSTFQDDNFDNFGETEEPIVEKKGSLKERLMKKIERKKKKERSTKASKSPKSEATIVFDDSTMVKDQLNTVEKPIQVLVENRSGNLVPKSATVAKSFASVKLKKIAQGEGKHVFATKALSFDQFSFGFLVIPPKSLKQLEKPLFNQMFFVHGAGERGIKVLINGSSLALFKGSCFLAPKQNSYSIENFSGEVAKLCFWITKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF8</accession>
    <name>A0ABV2AGF8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glycoside hydrolase family 19 catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000438</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000068">
        <property type="protein sequence ID" value="MES1918473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00325">
        <property type="entry name" value="chitinase_GH19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.530.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.20.10">
        <property type="entry name" value="Endochitinase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016283">
        <property type="entry name" value="Glyco_hydro_19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000726">
        <property type="entry name" value="Glyco_hydro_19_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595:SF79">
        <property type="entry name" value="CHITINASE 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595">
        <property type="entry name" value="CHITINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00182">
        <property type="entry name" value="Glyco_hydro_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001060">
        <property type="entry name" value="Endochitinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="Lysozyme-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0611">Plant defense</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycoside hydrolase family 19 catalytic" evidence="3">
        <location>
            <begin position="8"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="245" mass="28125" checksum="92F91FB7A6A7BA6C" modified="2025-10-08" version="1">MWAELFPQQGVDNCNASNLLTHASFVRAVEQQWSRNSRFLKSNDMNKNRLELAAFLAQTSHETTGGWNTAIPPRFFWGYCFYREINPGYNYCDSTAFDECKANDYDCKCSPGKAYYGRGPIMLSWNYNYGLFSQEYFGDNRLLSTPELLESDGALAFEAAIWFWTRPVYSKPSCHDVIHGNVISSDFEGRTIGFGLLTNIINGGLECGKGNNEKENDRIGFYERYLEYFSVTDSRLKTCRDMKPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ3</accession>
    <name>A0ABV2AGJ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Methylenetetrahydrofolate reductase (NAD(P)H)</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000649</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000115">
        <property type="protein sequence ID" value="MES1918732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003171">
        <property type="entry name" value="Mehydrof_redctse-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02219">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="FAD-linked oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="258" mass="30450" checksum="1E8C919745793E47" modified="2025-10-08" version="1">MKVTFNLLCKHPNLLLPEIWRFNKHKNFIFSLSRNSYLSEDIKHIKETFEHGYNPIFLVNYTDYTKNDKNHLCNTLKKNNIKNLMLLPDFNPKKDITNDIDYSKTIDFMKILKEKFTRSQIYTLAFSENEISVENQMARIKQLKEMQSLGLKGIYTRPFFDTNLFFEWRERALDAGIKIPITAGMITLSQRNTEFLKTKYGINQLNLSEILNYYKDKTGIMALEKNLNELRKNGINDICVYTLYSTKLAESLIKELNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH56</accession>
    <name>A0ABV2AH56_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PUM-HD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000888</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000178">
        <property type="protein sequence ID" value="MES1919009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033133">
        <property type="entry name" value="PUM-HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001313">
        <property type="entry name" value="Pumilio_RNA-bd_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537:SF12">
        <property type="entry name" value="MATERNAL PROTEIN PUMILIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537">
        <property type="entry name" value="RNA BINDING PROTEIN PUMILIO-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00806">
        <property type="entry name" value="PUF"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00025">
        <property type="entry name" value="Pumilio"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50302">
        <property type="entry name" value="PUM"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50303">
        <property type="entry name" value="PUM_HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="PUM-HD" evidence="3">
        <location>
            <begin position="63"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="128"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="167"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="234"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="273"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="2">
        <location>
            <begin position="348"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="405" mass="46611" checksum="B0095C8E3489A259" modified="2025-10-08" version="1">MAFGNQWRPSCHFAVAKIDDLIDNPKMSSNSKEILNLNNNALMAATLGFEPNHKWSEVSKNQLNSDILQNEFCDVIGQMNEINLNDNSNQNSIKEQQHRLISFCFSKKESLMLQNYIKNGKADRIHDAFKSSPKEICRVSKNVFGNYVIQLLLQFGTDQQKDHISDKISDNCKDLAFNKYGSRVVETAIKHATDRNAKKFIKNLQDKFVQCSIDINGTHIVQSLIEKDAEIANNVLNDEEVIFLLSKDTNGSRVVQKMILYFRGAKQNDLLEKIMSKIKVLVLDRNGNYVVQTMLRLRHPNIFSRICDLVTKDIRKYSCHKYASNVVENCVLHGSKTVKEKIWRCIFDEMSTFNILVNDPFGNYVLQKLIRNKDSKTRSLLSNKIKMDSAINGEKLIYFLRKLNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS6</accession>
    <name>A0ABV2AHS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001074</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000227">
        <property type="protein sequence ID" value="MES1919213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="99"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22518" checksum="A75B1A0DCB10421E" modified="2025-10-08" version="1">MKLEISKRSEEAWKERFNKLFGFENNSKKLSNNNKNIAKSLIKRKMDRRKTLGVLGNKNFKFEQTEKKQNLSNNFKFDKNANLPNKKFAKNLTANKTLIESMRLKLSEANTKNDLLEKKIFEMGNQIENFEKTKINLENKIEFEKKERMAEIVKAEEKFEAKVGDFKEKMDFLKRKNQNLEEKQFRYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX1</accession>
    <name>A0ABV2AHX1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Transcription factor TFIIB cyclin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001119</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023486">
        <property type="entry name" value="TFIIB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00782">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription factor TFIIB cyclin-like" evidence="2">
        <location>
            <begin position="2"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="10150" checksum="ABE7D3E64C774682" modified="2025-10-08" version="1">MRFCSVLKLPPKVANKATALSKEAENHSFASGKAPASIAAASILAAADMEHDSNLHKSVEEVAEATHISASTLKQMYKAMQSNANVLLAALEKTKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ2</accession>
    <name>A0ABV2AHZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001087</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic/archaeal RNase P protein component 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000232">
        <property type="protein sequence ID" value="MES1919227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3250">
        <property type="entry name" value="Ribonuclease P, Pop5 subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002759">
        <property type="entry name" value="Pop5/Rpp14/Rnp2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016819">
        <property type="entry name" value="RNase_P/MRP_POP5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038085">
        <property type="entry name" value="Rnp2-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15441">
        <property type="entry name" value="RIBONUCLEASE P PROTEIN SUBUNIT P14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15441:SF2">
        <property type="entry name" value="RIBONUCLEASE P_MRP PROTEIN SUBUNIT POP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01900">
        <property type="entry name" value="RNase_P_Rpp14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF023803">
        <property type="entry name" value="Ribonuclease_P_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160350">
        <property type="entry name" value="Rnp2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13670" checksum="D3DFE96668F0121A" modified="2025-10-08" version="1">MVRVKYRYFVLKINWKDGKIKNESPEYIKKAISERIKELYGTFGLALMPLKVKMYNRMTRMCIIRTFRSVHKSVWIAISMVRFIDDRNVSLNCIHLGGTIRKCSKAAEMYLRKMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI88</accession>
    <name>A0ABV2AI88_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">dTMP kinase</fullName>
            <ecNumber evidence="3">2.7.4.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001018</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Pyrimidine metabolism; dTTP biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thymidylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.9" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000211">
        <property type="protein sequence ID" value="MES1919154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01672">
        <property type="entry name" value="TMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00165">
        <property type="entry name" value="Thymidylate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039430">
        <property type="entry name" value="Thymidylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018095">
        <property type="entry name" value="Thymidylate_kin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018094">
        <property type="entry name" value="Thymidylate_kinase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00041">
        <property type="entry name" value="DTMP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10344">
        <property type="entry name" value="THYMIDYLATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10344:SF1">
        <property type="entry name" value="THYMIDYLATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02223">
        <property type="entry name" value="Thymidylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01331">
        <property type="entry name" value="THYMIDYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylate kinase-like" evidence="9">
        <location>
            <begin position="16"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24609" checksum="F9A9C355ED3DC92F" modified="2025-10-08" version="1">MSINNNIDRRGTLIVFEGLDCSGKSTQVNLLAKFFKENSIPFETMSCPQRDTPVGKLIDSYLIKSTALSDETIHLLFSANRWELNSDMLEKMENGVHILMDRYYYSGIAYSMAKGISKKWCAMPDFGLIAPDITFFLDAPLEISGKRGHYGNEIYEKKEFQKKVRKAYSEMEAHFNMIDAAKDIFEVQKEIRKIVIETIAEREYSKIERFDKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AID9</accession>
    <name>A0ABV2AID9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cleavage and polyadenylation specificity factor subunit 1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CPSF1_1</name>
        <name evidence="2" type="ORF">MHBO_001278</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000291">
        <property type="protein sequence ID" value="MES1919445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018846">
        <property type="entry name" value="Beta-prop_RSE1/DDB1/CPSF1_1st"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050358">
        <property type="entry name" value="RSE1/DDB1/CFT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10644">
        <property type="entry name" value="DNA REPAIR/RNA PROCESSING CPSF FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10433">
        <property type="entry name" value="Beta-prop_RSE1_1st"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 first beta-propeller" evidence="1">
        <location>
            <begin position="13"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22324" checksum="FB14A0EBFFDACC4E" modified="2025-10-08" version="1">MYSFYKQTHFGTSIENSERGHFFDSKSEVVAVSKGNVLEVYTVRKNSRNDYKLHLTGSYSFFALIKCFCFAKFAGHSRDSILLGFENSMMSIIKFNKATNDIRTISMHTFDRHYRNEGYRSQHFRYLAVTDPLNRCTVMSVSESKVLVMPLTNNNLTFLKNQRRLVEHRDLEPDEIKTSSIIKEKSINKRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE5</accession>
    <name>A0ABV2AIE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000227">
        <property type="protein sequence ID" value="MES1919214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="67"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="133"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="30632" checksum="CC9B8D3A6CB59A30" modified="2025-10-08" version="1">MNFRIDKIFIISRFLILQNKFAIKKIRQKEKTEKWEMTEKQLEKERTKREQTETLLNKESQSTQFLRQKLNEKSKICEDLLRKLSENTLKMAQNTQKTTEKDIVKVENKSKNGENYSKEQFKFAQKMAKSPENSNLRRELERLNAENSNLVTQLESMADEIERRTCQFEAKDEEKNRLENIVNEQNAKIESLKKRLLAEDFKRGEIFGKADVPKIYIDNNIFYKLFNNIKIDFGNNIIKIDFGNNIIKINIGNNIIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK8</accession>
    <name>A0ABV2AIK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000309">
        <property type="protein sequence ID" value="MES1919500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="16351" checksum="0EC784895967E644" modified="2025-10-08" version="1">MDSLKNVLGRRQKTYYNKKYDSCSDYEYNWRIRKEHFLYYERQKEDELKERKENKREESLKRREKREESFKRREKREESFKRRENEIENTLSTDKNAPEMSDLIEVVVPKSVLGKMKKYFTALMRKISLKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX0</accession>
    <name>A0ABV2AIX0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PDZ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000342">
        <property type="protein sequence ID" value="MES1919616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="PDZ domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="408" mass="46133" checksum="7CE2508AF0D6482E" modified="2025-10-08" version="1">MMEEDNSSAESKSLKTTDSYDKSLLDAVSTINEDLKKLIFGVSSEDKTEKPIKNNPFGALNYSASPKKLVNNSEKFDKYAIKYDENGFDKSGKNENFAFEDKPIMFKRHSFKKMNNLILENDNYNQNLDNHNLFKNGQKSINKNFIKNGQNLDNQNFIKNGQNLENQNLFKNGQKSINKNFIKNGQNLDNQNFIKNGQNQIDKNLFKTEKTKSLLRSPFVSPLAPASLRTAPYSSMFWGADYNVTESLKEQKSSKEELKNGSLNVGPYKSMFWGENYNVPEKKDRTEILRENGLKERFGNIEKVPEKAIGKSKEKGEMESVGDSVTGNFVNGAIYDNSKLQKSGFLIATHLVKTAAADRAGLCVGDIIVQFGNFRKNTFPGLEKISTFVQSKANSQISVVVFREEIVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX9</accession>
    <name>A0ABV2AIX9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001418</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000343">
        <property type="protein sequence ID" value="MES1919620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="618"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="618" mass="72200" checksum="76E294D971D3506D" modified="2025-10-08" version="1" fragment="single">MNRKKLFSFDKKLKSKMGWSISELTRNFLRGSGKLNSEYYEHFWQQLQSSEKSYLQIIARTLEKLAIYPSDNLSLSVLCNTLVYLLLVEHILYFDTPTLERLKKLLDSNLAQIDRQTKNLLRSAVNIFDGKDMFAKLINNYFEPTRNISYQKVNKLMIGSDKTFYASYLNTLNLQDRENAEKILFLLCNKIQDFASPDLSQQDIHEKRVFLILDYIRSFISQHAIFPITLVEKLEEALKALYFWPSKVSNEVLRTLHLVESEKKFKGSALLFKFGAESVYSNVIAKVPILKNRKLVKWENLRTSPIYYLAENYSRNLFFLFLMRVTTITVDQFKGEKVLKGLSSRTILLMLIYILNLNGDLTTNDVTNIHWLTKHQVLSYFKRLLDISFILSNSELDDASKKAKLAVLKKEIYGTAMKNLTNPTKNLRPICSIKKFPANFVPELPPLSHLVFTSESKNKGQHKLEDPSSVFTSVWNKYLDTKTLNFRFKFVIFGGKKTINSVIKIYVSLLEKGCENEKMEFYLIPTIKSRLAIYMAMNDEQYLRSVFNIFHRDLLIPSFDLNEKEPAKLKYPNDKIQSPGLFFREMVEKYVREANKTFEFTLCNVYTWENKSDSDCYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ07</accession>
    <name>A0ABV2AJ07_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">protein phosphatase methylesterase-1</fullName>
            <ecNumber evidence="2">3.1.1.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PPE1</name>
        <name evidence="7" type="ORF">MHBO_001447</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>[phosphatase 2A protein]-C-terminal L-leucine methyl ester + H2O = [phosphatase 2A protein]-C-terminal L-leucine + methanol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:48548"/>
            <dbReference type="Rhea" id="RHEA-COMP:12134"/>
            <dbReference type="Rhea" id="RHEA-COMP:12135"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:90516"/>
            <dbReference type="ChEBI" id="CHEBI:90517"/>
            <dbReference type="EC" id="3.1.1.89"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the AB hydrolase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.89" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000356">
        <property type="protein sequence ID" value="MES1919652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051723">
        <property type="term" value="F:protein methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016812">
        <property type="entry name" value="PPase_methylesterase_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14189:SF0">
        <property type="entry name" value="PROTEIN PHOSPHATASE METHYLESTERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14189">
        <property type="entry name" value="PROTEIN PHOSPHATASE METHYLESTERASE-1 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0719">Serine esterase</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="6">
        <location>
            <begin position="43"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00049203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19407" checksum="E625E111D9FBEAC5" modified="2025-10-08" version="1">MEESDNIAAVAVIDLSEGTAMSSLPAMTRILRQTPHSFHSHEEAIAWSLQRGSERSREANRVAIPSRLQRSDSGALEWRTNLFSTRDFWVDWFKGFSDDFANLRTARLLILAETDRLDKPLTIAQMQGRFQLEVLPGSGHEVHENNHKAVERILREFVARNKQFRSDIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ17</accession>
    <name>A0ABV2AJ17_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein-L-isoaspartate O-methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.77</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001460</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[protein]-L-isoaspartate + S-adenosyl-L-methionine = [protein]-L-isoaspartate alpha-methyl ester + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:12705"/>
            <dbReference type="Rhea" id="RHEA-COMP:12143"/>
            <dbReference type="Rhea" id="RHEA-COMP:12144"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90596"/>
            <dbReference type="ChEBI" id="CHEBI:90598"/>
            <dbReference type="EC" id="2.1.1.77"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.77" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000361">
        <property type="protein sequence ID" value="MES1919670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000682">
        <property type="entry name" value="PCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00080">
        <property type="entry name" value="pimt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579">
        <property type="entry name" value="PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579:SF0">
        <property type="entry name" value="PROTEIN-L-ISOASPARTATE(D-ASPARTATE) O-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01135">
        <property type="entry name" value="PCMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01279">
        <property type="entry name" value="PCMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="24121" checksum="66ECFC068BFDCA12" modified="2025-10-08" version="1">MTSSGIVKNKDLIQYLIKGKILKNERAVIAMMQVDRKNFCTSKYPYRDIPTPIGNGATISAPHIHALYIELLSDFLKPGAKALDIGSGSGYSTAVMAHMVKPGGKAVGIEQIRSLVKFSNQNVDKDSYSLRINNNIEFVEGDGREGWAKEAPYDAIHVGAASEGIPKTLKEQLKIGGRMILPVNTPGDKEKQILMQVDKKGPDSFEYTDLGEVLFYFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE9</accession>
    <name>A0ABV2AJE9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rubisco LSMT substrate-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001552</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000399">
        <property type="protein sequence ID" value="MES1919783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1420.10">
        <property type="entry name" value="Rubisco LSMT, substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015353">
        <property type="entry name" value="Rubisco_LSMT_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036464">
        <property type="entry name" value="Rubisco_LSMT_subst-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09273">
        <property type="entry name" value="Rubis-subs-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81822">
        <property type="entry name" value="RuBisCo LSMT C-terminal, substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rubisco LSMT substrate-binding" evidence="1">
        <location>
            <begin position="26"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="26199" checksum="3C1142754263E9D9" modified="2025-10-08" version="1">MISGRLENNFALNKLFIDPSFKITKFYNDEETRQCFTFLRLLFTSKEQILKFYKSKLKNKLIKVRMPALSIENEIKLLKLLKHTANLKLKSFSTSLKENKKELKLVEKMAGRTNNFDTENKKMQLLVAIGEKKVLRFYQKLLFKIQNLLKNGDRKKICKKDFSDFMEKTKFYEFCKNDPFKVYVSNVFTVLMERHCNMSAKDYFAKFGGTKKNKKDVICID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI9</accession>
    <name>A0ABV2AJI9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Calcium-regulated actin-bundling protein C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001594</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000415">
        <property type="protein sequence ID" value="MES1919835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053356">
        <property type="entry name" value="Calcium-reg_actin-bundling"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040810">
        <property type="entry name" value="F_actin_bund_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37009:SF1">
        <property type="entry name" value="CALCIUM-REGULATED ACTIN-BUNDLING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37009">
        <property type="entry name" value="EF-HAND DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18060">
        <property type="entry name" value="F_actin_bund_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calcium-regulated actin-bundling protein C-terminal" evidence="2">
        <location>
            <begin position="174"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="169"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="32383" checksum="3FDB4807CA883E63" modified="2025-10-08" version="1">MSEGKSFKQSLDSESAAFFDRMTKNTFREQAISVLNAYWKEIGTQADIIYHVFYKTMTKTDMHAKNVDLIHLYEEGNFLELNMALYFYEKLCKFVEEHPEWKQDKYKISQPQMLTAIKRRNELRDKVDVNISNNISLLEVLLHQYRGNANINPADYVHRSMNIDEHPKIREARLALEDVNKKIKEYEAKKSELEEKSKKPGIQGSKAKHELAIFECGPERESLNESLLHAEALLRKMHKQFGDGAPASSGSENALGDQRGTLFWMDCEIAEKKRLYGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR3</accession>
    <name>A0ABV2AJR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001413</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000340">
        <property type="protein sequence ID" value="MES1919613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="18293" checksum="0D1DC0A8B5934065" modified="2025-10-08" version="1">MLYNNYKNLRKSFFKKLKKQSFLKEKRFISFNKKEIIEYVENSEKVSAIEALKRVDKLILNVVDANQKPIIRHKKIVAKRTKDEQFDDFHRHSNNIPKHKKLTLFFLHYYRHSLYRCPIFASRKMAYRKNSTKNQSGRYLRRRSNDRFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJW2</accession>
    <name>A0ABV2AJW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fringe-like</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">B3GALTL</name>
        <name evidence="4" type="ORF">MHBO_001537</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ISY1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000391">
        <property type="protein sequence ID" value="MES1919764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.660">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029012">
        <property type="entry name" value="Helix_hairpin_bin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009360">
        <property type="entry name" value="Isy1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037200">
        <property type="entry name" value="Isy1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13021">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR ISY1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06246">
        <property type="entry name" value="Isy1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140102">
        <property type="entry name" value="ISY1 domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="24385" checksum="019B5D8EB6E6D993" modified="2025-10-08" version="1" fragment="single">MMARFVRYKLKEEAGIGIRRPAIAADCKDINEAERWRADIIRDVSRLIADIQNVGLEEFEIRDLNDSINKKLRLKNHWEVQIVNLGGPDYRRLAVPLDKNCIVGDRGYKYFGVAKDLPGVREFLGHNKNHEKDTRPTRGELLKRVNIEYYGFGDEEDEDLAKEEKEATQILKAKRMKEWVETRKAKNLSTEVPKKPILASSGKGDQFKVFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ4</accession>
    <name>A0ABV2AJZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">N-acyl-aliphatic-L-amino acid amidohydrolase</fullName>
            <ecNumber evidence="4">3.5.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">N-acyl-L-amino-acid amidohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ACY1</name>
        <name evidence="11" type="ORF">MHBO_001723</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M20A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.14" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000470">
        <property type="protein sequence ID" value="MES1919990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004046">
        <property type="term" value="F:aminoacylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.900">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.10">
        <property type="entry name" value="Zn peptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052083">
        <property type="entry name" value="Aminoacylase-1_M20A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001261">
        <property type="entry name" value="ArgE/DapE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010159">
        <property type="entry name" value="N-acyl_aa_amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01880">
        <property type="entry name" value="Ac-peptdase-euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45892">
        <property type="entry name" value="AMINOACYLASE-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45892:SF1">
        <property type="entry name" value="AMINOACYLASE-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036696">
        <property type="entry name" value="ACY-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="Bacterial exopeptidase dimerisation domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53187">
        <property type="entry name" value="Zn-dependent exopeptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00759">
        <property type="entry name" value="ARGE_DAPE_CPG2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase M20 dimerisation" evidence="10">
        <location>
            <begin position="192"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="406" mass="45790" checksum="CED62FB52A4BC01E" modified="2025-10-08" version="1">MADCENSEAVANFRGFLRIPSVSKNGPFDKSYERAVDFIDSVAKKYGFATKRYQFVRDKPILVVTREGSCRTKKSILFNCHYDVVPVAKEMWAKPPFGAEIDSNGNIFGRGSQDMKCIGIMVIEALKNIKQRFSRTVHVSFTPDEEIGSVDGMKIFSESCEFRKLNVGMSFDEGIPSESDTYHVFLDERVPWWLEIRATGETGHASIPRNNTALHKVIKFAERVSDYNNESVKTAKTIKELGERTTISLSDIHSGTNFDDLTKTPPNVIPPCASVTIDARITPKEGTERFLKRIKKWIKEASGCEEGMQIRYIQKTSSSNPTADNSEPFEALSTVLGKMNKKYEKCVFPGATDSRFLRKIGIPAVGFTPVIDTKIRLHDNNEYLNVKQFYEGIKIYSNLIEKLALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK56</accession>
    <name>A0ABV2AK56_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001737</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000476">
        <property type="protein sequence ID" value="MES1920007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25427">
        <property type="entry name" value="zf-CCCH_UNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="2">
        <location>
            <begin position="23"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="1">
        <location>
            <begin position="23"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16639" checksum="1D0125EB417DCB68" modified="2025-10-08" version="1">MELNLPKNVYSYDKSNHDFYLKNFRKIVCTDFIMKNCPFDSKSCFYSHSLKPQRRVGNLDKNYGIFYKSEACEKMLKQQICEKDVECDCAHSQFEIDYHPDFFKTRECASPLSSKNGFCAKYGLHCPNAHGDNDLRIFSMLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK75</accession>
    <name>A0ABV2AK75_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">3-dehydroquinate dehydratase (3-dehydroquinase)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ARO1_1</name>
        <name evidence="11" type="ORF">MHBO_001451</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000358">
        <property type="protein sequence ID" value="MES1919657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08195">
        <property type="entry name" value="DHQS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1090.10">
        <property type="entry name" value="Dehydroquinate synthase-like - alpha domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00110">
        <property type="entry name" value="DHQ_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050071">
        <property type="entry name" value="Dehydroquinate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016037">
        <property type="entry name" value="DHQ_synth_AroB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030963">
        <property type="entry name" value="DHQ_synth_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030960">
        <property type="entry name" value="DHQS/DOIS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056179">
        <property type="entry name" value="DHQS_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01357">
        <property type="entry name" value="aroB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43622">
        <property type="entry name" value="3-DEHYDROQUINATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43622:SF1">
        <property type="entry name" value="3-DEHYDROQUINATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01761">
        <property type="entry name" value="DHQ_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24621">
        <property type="entry name" value="DHQS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001455">
        <property type="entry name" value="DHQ_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56796">
        <property type="entry name" value="Dehydroquinate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0170">Cobalt</keyword>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="3-dehydroquinate synthase N-terminal" evidence="9">
        <location>
            <begin position="69"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="3-dehydroquinate synthase C-terminal" evidence="10">
        <location>
            <begin position="182"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF24621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="360" mass="40929" checksum="14B75A7748998F30" modified="2025-10-08" version="1">MASKHDPIRLKNYNIIFIENIFKDIVKNLKKLVSAPFYAIITDDNVKNLYGNDLFSILQNNDLNTFIYSIKPAENSKTRKTKARIEDWLLRLGCNRESVLIALGGGVVGDITGFVASTFMRGIRYVQIPTTVLACADSSIGGKTGINVLRAKNIVGTFHPPKAVFVDVNLLKTLPERHFRNGFSEIIKIAAVCDRDFFEFIESFSITSLSSFSEKQKLLDIIYKAIKLKSEIVEKDERESNKRKILNFGHTIGHSIEAVSDQYLHGECVSIGMSYESMIATELGVLKYEDYRRLISLLIEFKLPTRVPLKMLQNIKFSEFENFMRLDKKNKSNKSDYVQIVVLKSIGLVLKATQHQLKFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK96</accession>
    <name>A0ABV2AK96_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cullin family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001814</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cullin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000511">
        <property type="protein sequence ID" value="MES1920096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.130">
        <property type="entry name" value="Cullin, Chain C, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045093">
        <property type="entry name" value="Cullin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059120">
        <property type="entry name" value="Cullin-like_AB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016158">
        <property type="entry name" value="Cullin_homology"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036317">
        <property type="entry name" value="Cullin_homology_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11932">
        <property type="entry name" value="CULLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26557">
        <property type="entry name" value="Cullin_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75632">
        <property type="entry name" value="Cullin homology domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50069">
        <property type="entry name" value="CULLIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cullin family profile" evidence="2">
        <location>
            <begin position="1"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="37481" checksum="20A3C3F2CF130F90" modified="2025-10-08" version="1" fragment="single">RQNLPKKNDFSVQIWNSRLFPNLSQTEIAPFGDFREHCEKFESEYQSKHKKKNLTWRFDQGRALLQICFQDDIPNGDKERTESLDVTTIQMFVLKLLEESEEPLSFEDLVSKLKIPPRLLRFHIKFLLEKFPDDSSVLRTTSGNGKLLYGINSDFGTKKRFTMSGMIIDATKFPPFSTERFDMLGEGKEGARKSAVFADFFGGYSDFGNEEELGLREKRPWPQSSAFCERLKETTATKLDDKILKSNEIGNIKKRELTDAALLKILRGCESAKEFNLISGVRKALASTLMSTLETDFIKERLSRLVELEYVRFDERKKVYCYVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKJ2</accession>
    <name>A0ABV2AKJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001734</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000474">
        <property type="protein sequence ID" value="MES1920004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="802" mass="93440" checksum="A90CFB8A3E56293F" modified="2025-10-08" version="1">MSVKRRNSDFKTQKKKVGKKLKSLNETSTAFKSSFIKTHQNLSLSKNSNSNQKPLDFLSSLAKQSPNFFSTQNSDQVSQYLFQIGPLLISSNSTVRSLCVKCLRPLLRRCLNFDKMNSKSLNNSIILLTSYIKSAMSTPSTDVRRDSIKFLFLFFEILGDLFVGFGGQSSVLDKQNLQIVNKKTFYKTIEDIDLFDFFPFIVLLFKEQIDNVTIKSIKSSNFDKQFKQKSGKILKVAILFIIKILKMVKKDKKSFIDRSVLANFNKKIVAVSDKILKLLNFCQIFADLLKNDFEIYCEIDVFDNIAICVDLICHVSDLYLNHLENLSYIKMLDIDLNILEVVRALFFNLKNVYPLLKKTGSKFMLMKAFRAFIKSKEAATLIGNEKLLKFSQNIKFGQIAQIERFCSDELKSYCNMANSQNSETIEFQKLIDSLLSFNKTVKNNILLIKNMLHETSDSELYWSFVCKILQKKKHEFLLISNFDKIFSKQIIANLTSSIENTAIKNTNIQILTIVNKLALSKFSKIDENFAKLAKIDNNEYLRIFENTNDFLVKIINLEYEKLSNCKISPNLLNNITNLAKSTLLSKKLIGEIQKIFLNKKPNFQIYKEHLFDSIMQNNNFNQIEQKTFFVLECLVTKNNFENDKICKFLLSKIDDLMENFAILVFQLLLKFTEKLISDDKFDYFNIFVINYCLNLIPREKIALLHCSDKVILQIEKINQMLWLNYTDSTKFGNKYLILSCWKKWPYLFGSLITKFHCKFCHKISEKFCQIEKFYELINEEEMEDNVSEHNITIRFLKGKLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL1</accession>
    <name>A0ABV2AKL1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Pre-mRNA-splicing factor SLU7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">SLU7</name>
        <name evidence="11" type="ORF">MHBO_001911</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in pre-mRNA splicing.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Associated with the spliceosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the SLU7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000554">
        <property type="protein sequence ID" value="MES1920220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021715">
        <property type="entry name" value="Slu7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039974">
        <property type="entry name" value="Splicing_factor_SLU7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12942:SF2">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR SLU7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12942">
        <property type="entry name" value="STEP II SPLICING FACTOR SLU7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11708">
        <property type="entry name" value="Slu7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00098">
        <property type="entry name" value="zf-CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="Retrovirus zinc finger-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 8" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5 8" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0747">Spliceosome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="10">
        <location>
            <begin position="96"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="7"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU367071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="416" mass="47254" checksum="01F23D4669E46468" modified="2025-10-08" version="1">MSSLQRLTREDYKRKKELDELRKAGAAPAEVDDEGNMINPHIPQYMAEAPWYVSDGRPGLRHLKKFASDANKAGFHERAKRGAAKKTARRYRPGACRNCGAMGHSARECCERPRKRGARWTGEDIKPDRIQSSAPDFDYDGKRDRWREYDLDEHKKLVKFSERVDAARKEKQDRVMDEMIMGDSEKNLMQVGSVDGDNIKDPGLTLQIMNEKKRQTVRNLRTREDTAKYLLNLDPNSAFYDPKTRSMRSNPFADVAGTSSNYIGDNFTRVSGDAEKFMRQDQLAGILDRKGLESQKGIAQMASNPTKSEMVVKKFVGKLDKSKNSSHSKLMRKYGGAEHFEKIGVPTETFKYREFDEAGNEKALSFESAAKTKYLEDALEGGHSEIWGSFYDKKSDSWGFACCHSLKRANVCKGII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL2</accession>
    <name>A0ABV2AKL2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Biological adhesion</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">COL6A6</name>
        <name evidence="2" type="ORF">MHBO_001923</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000563">
        <property type="protein sequence ID" value="MES1920231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050525">
        <property type="entry name" value="ECM_Assembly_Org"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24020">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24020:SF20">
        <property type="entry name" value="PH DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="1">
        <location>
            <begin position="26"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25351" checksum="48621EAD2090728D" modified="2025-10-08" version="1">MQSFSNIKKILIFTAFIKSVFACLFNIAYCIDGSGSITYENPTGYDDEKNFLVDYNNQITKSSEESFLKTMAEGFAETFVDYFDYNDFDELSQVNDALLKIEPPSKTGETKIGGCMNKVYTNNRPNDLATVLLVVTDGNPFKDTYDVKEMSATMRSDNFFIQAAGFNDINYDILNEITGDQDMIIYSKNVTDLDKKIKQLTDDICKKSLIDKIFFVKLLSQHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL6</accession>
    <name>A0ABV2AKL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">G patch domain-containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">GPATCH1</name>
        <name evidence="3" type="ORF">MHBO_001897</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000549">
        <property type="protein sequence ID" value="MES1920203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011666">
        <property type="entry name" value="DUF1604"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000467">
        <property type="entry name" value="G_patch_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13384">
        <property type="entry name" value="G PATCH DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13384:SF19">
        <property type="entry name" value="G PATCH DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07713">
        <property type="entry name" value="DUF1604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01585">
        <property type="entry name" value="G-patch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50174">
        <property type="entry name" value="G_PATCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G-patch" evidence="2">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="541"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="541"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="551"/>
            <end position="562"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="618"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="618" mass="71563" checksum="AA39ADE8A4BF1592" modified="2025-10-08" version="1" fragment="single">MSNLKRKLDSEEKLDLTIDRIGTPFRSLTIDINRPKDNFGPNKKPKQVLSSIESQGRRRFHGAFTGGFSAGYFNTVGSEQGFTPSEYKSTRENKSSNKKFRPQDFMDDEDINLLTQLGDIQNQKNQKANDPKNKFLDLLFESKNTSKGVELLTKMGWKEGSGIGPRRRRKNFDKYSSKFSLPASDIEVYKFESKVDDCGFGHKPNLTGNRNSAKFGANRSKIDLSSRNNLTSAYGISVLEENEAQDDIYGTEKLDDYNIEIQDKSSDENSDKIFLNKKDENSKNDFNYTKKNGDHFYGFVLEKKLFLKNRHIDRIQVPKWFKGIHKFDLPGMKLTKDLLKFSIKLPKRKNTAKNKNMNAKKRAKILGEVKIPVRKIPVSLQNAFTVGTVLKAEINGYSEGINHRKIKLEPFEKMKKKFSDDINKQKRFHYFINEILMFEAIKITRFGSNKNDDPKEGEKEEFLKIFEKFEEQNKNHQYFAKRRKIKNSRELATKKITRTSENWRPERLLCKRFDVPDPYKEFIKKMGIDDNIKIDLGDNNVKRNDKKITDSDSDSETSDQSENDGKPATEMLKAIFEASDSELIESEDSSEENESQNILKLNRINKTEVTKLIPIIKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKM3</accession>
    <name>A0ABV2AKM3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">THO complex subunit 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">THOC2</name>
        <name evidence="3" type="ORF">MHBO_001915</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000558">
        <property type="protein sequence ID" value="MES1920224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040007">
        <property type="entry name" value="Tho2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021418">
        <property type="entry name" value="THO_THOC2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21597:SF0">
        <property type="entry name" value="THO COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21597">
        <property type="entry name" value="THO2 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11262">
        <property type="entry name" value="Tho2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THO complex subunitTHOC2 C-terminal" evidence="2">
        <location>
            <begin position="125"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="439"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="439"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="471"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="488"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="508"/>
            <end position="532"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="547" mass="63783" checksum="89505BBD868B77E7" modified="2025-10-08" version="1">MFSLYESNAIQPLLIKIAANIKAIFWNCTLELGINGVQTLSFQHSISCRTFFSLAEFLALNLGNEEYATYVPPINVMFKDLKLRPQEIFSLSRRISLNVETKVDIESTEKAVSEYLAENFKDCGVSTKFYMLFWMGELSYLMTEKAENLYKDTIEMFSKINSDRETKKTAASVAAKLKKELKNRILLKNNFLTKCELMNEPSKCFDVENANRVFLEICVLPRCVYSPHDAVYSANFIFLAMSKNLAGLSFVNFTQNLYQMLPSLIQSATEDEASNFGRFLRQFLSTSSEFCTDKIRFEKLATDNPCFMRGNKSYYDSEEFRLMFYRIHDKFFFTFAKILSNNTRKDLLRNANTAITNTAQILKQINSVFPLFRPHLEEIKQLTQKVIGVVENQSNLKTILVSLLGLLERNKNTVLPERFSRKYVRLNQSKQRMENLKRQLLQKKETKENETRKSQISSQSNNKNEEREKVASSNVRNEMSGSQKRQNKTIEKGRKESAKKVPIFETVKGFDLKKSQKRERDKSVERFYSKPQREKRRRRTKVIENKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKM6</accession>
    <name>A0ABV2AKM6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001917</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000559">
        <property type="protein sequence ID" value="MES1920226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="85" mass="9788" checksum="70EBC598DB3870B9" modified="2025-10-08" version="1">MAYVSDYGLDQCNKSPKKFSRSVEFSSTREMSVLLVESKGKRKLKTKRRFAKKFVTTIVKLPYYIILSPILFVLKSANCTTNNDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKM9</accession>
    <name>A0ABV2AKM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Dual-specificity kinase, spindle pole body (SPB) duplication and spindle checkpoint function</fullName>
            <ecNumber evidence="7">2.7.12.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MPS1</name>
        <name evidence="7" type="ORF">MHBO_001913</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.12.1" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000555">
        <property type="protein sequence ID" value="MES1920222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004712">
        <property type="term" value="F:protein serine/threonine/tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22974:SF21">
        <property type="entry name" value="DUAL SPECIFICITY PROTEIN KINASE TTK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22974">
        <property type="entry name" value="MIXED LINEAGE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12514" checksum="CFF573781794E5E2" modified="2025-10-08" version="1">MSLTSRKAFALKHIQIKNPSIIANFEREIELLEKLQGEGSIISLIDHERDYESQHIFMVFELAESDMAEFLKANAPLKLYSARYFWGQMVDAVRVLHKVCKLLSKSQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN0</accession>
    <name>A0ABV2AKN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001909</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000553">
        <property type="protein sequence ID" value="MES1920218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15464" checksum="594BF96E6B4965AC" modified="2025-10-08" version="1">MIKSEQCTPPVNGVMVATTVGGVKSQVHEEVGIPVEYPNEEVEQSLLMYRNMRPGDVDNKEGADNLYKEISSRQSVKDFKDAILKAIRMPHNEREFKSHSARNFILNNYSIHSNVHNILKTVRDVVAKFYQKREC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ7</accession>
    <name>A0ABV2AKQ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cation efflux protein transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001939</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000569">
        <property type="protein sequence ID" value="MES1920248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="entry name" value="Cation efflux protein transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058533">
        <property type="entry name" value="Cation_efflux_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050291">
        <property type="entry name" value="CDF_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43840:SF13">
        <property type="entry name" value="CATION EFFLUX PROTEIN CYTOPLASMIC DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43840">
        <property type="entry name" value="MITOCHONDRIAL METAL TRANSPORTER 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="Cation efflux protein transmembrane domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="117"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="158"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="198"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="Cation efflux protein transmembrane" evidence="7">
        <location>
            <begin position="91"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="265" mass="29678" checksum="A22E0882709FD3AE" modified="2025-10-08" version="1">MELQLRPLTEPAELEQLVVQKDKIEEKPRKVKAFYKQQNRKIKLLVQAFRHLKTPLLEKISDNNVFSKSGFTPQKPGKQKQSLSLQTRTAIVLSFFVNILLLLFKGLASFWSGSYSVIASTIDSLLDIVSGSILFAVEMCSARRSSDWYKYPQGKSRLEPLGVIVFSVAMAMVSLQLISTGAQQLAKDLSGKNHLIKFDWVTISIFSATILVKVTLFVYTKCVSKKTKSPAVGALAKDHLNDTMTSFTGFVAVFAGYHKNSIFFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ9</accession>
    <name>A0ABV2AKQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001916</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000559">
        <property type="protein sequence ID" value="MES1920225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="21380" checksum="0D954BD5C211AD8B" modified="2025-10-08" version="1">MATNMEHKVSINKNKSNIKNVKLLNKGSREAKNAHRTQATNRENFKKEIKDLLSKRLNRKILEKAQKKSLKRKYPFEEEVDLNKRFIVSVNNSGSFNRSDIKILEKQMLKELYLEFFDKFENFSIPMKTKEEYVWLRMNNKPFHVEGQYRYKWRVSNEYNIPELILEKFLVSISEWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL44</accession>
    <name>A0ABV2AL44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Zinc-finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002064</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000642">
        <property type="protein sequence ID" value="MES1920387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018866">
        <property type="entry name" value="Znf-4CXXC_R1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10497">
        <property type="entry name" value="zf-4CXXC_R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Zinc-finger" evidence="5">
        <location>
            <begin position="4"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF10497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21636" checksum="3D3275257D9A3EE5" modified="2025-10-08" version="1">MQKIMNKTCHFCKNATNKKKISCENDFCSRVYCYRNNCLKKLRQTYGSTSILERYYDRSEDDGLPRFICPHCKDSSRCLSNYCRRKNAGRKLPAAQLRRIEPPNEFRRNCEMGKNPGLKQNCKIEGNGTFEENNKFRANSRFGQKERVSKRVNIKNCVLNLNEVRPPKTGKFEPPDLEKIRAPVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG9</accession>
    <name>A0ABV2ALG9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Nop domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001934</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PRP31 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000568">
        <property type="protein sequence ID" value="MES1920243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.4070">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.90">
        <property type="entry name" value="Nop domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042239">
        <property type="entry name" value="Nop_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002687">
        <property type="entry name" value="Nop_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036070">
        <property type="entry name" value="Nop_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012976">
        <property type="entry name" value="NOSIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027105">
        <property type="entry name" value="Prp31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019175">
        <property type="entry name" value="Prp31_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13904">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR PRP31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13904:SF0">
        <property type="entry name" value="U4_U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01798">
        <property type="entry name" value="Nop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09785">
        <property type="entry name" value="Prp31_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00931">
        <property type="entry name" value="NOSIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89124">
        <property type="entry name" value="Nop domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51358">
        <property type="entry name" value="NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Nop" evidence="9">
        <location>
            <begin position="208"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="485" mass="55071" checksum="97BB9226A1B9C47F" modified="2025-10-08" version="1">MTTIADAFLDDFEEEELQKTMLEPEIEVKVETINMDESEDEIQNEKITELLENKNLAILLEKTDSLLYKNPSSSFNSINEDDEEYQIILESNRMIRKIEEEILVTHRYTCNIYSSRFQELEQTVLHPVQYAKVVLSIKNDLESVNTALDGILTEHQMLSTSISASATSGKPLPESDLKKALESCKITIKLDEARNKLLDYIKSRMLHLSPNLCALVGTEIAAELMTIAGGLNALSKIPSCNLQTLGSVKKEKNRSFELFYKSPHLGLLMKTNIILECPEEFQTKALRLLSAKVSLAVRLDCHQTDRSNEKGHKYKEEIQNRVEKWQEPPEIQPVKPLPLPAERRKSKRAGKRYRKMREKYKVTELQRMKNRVGFNIGEDNDDVEGESFGMIGKSGTGGLMKIVGNKTSKVRKLDRMNKLMIDRERKKRQRKLKKGEASGLATSVVMTEVQGMSFVNPEVVLKESGNNGSGTSTYFGTKSFNKIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM37</accession>
    <name>A0ABV2AM37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">YmL10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">MRPL10</name>
        <name evidence="6" type="ORF">MHBO_002054</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL15 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000638">
        <property type="protein sequence ID" value="MES1920377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01341">
        <property type="entry name" value="Ribosomal_uL15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030878">
        <property type="entry name" value="Ribosomal_uL15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021131">
        <property type="entry name" value="Ribosomal_uL15/eL18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036227">
        <property type="entry name" value="Ribosomal_uL15/eL18_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005749">
        <property type="entry name" value="Ribosomal_uL15_bac-type"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01071">
        <property type="entry name" value="rplO_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12934">
        <property type="entry name" value="50S RIBOSOMAL PROTEIN L15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12934:SF11">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL15M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00828">
        <property type="entry name" value="Ribosomal_L27A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52080">
        <property type="entry name" value="Ribosomal proteins L15p and L18e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL15/eL18" evidence="5">
        <location>
            <begin position="87"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="10"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="20"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="15666" checksum="0F751A0E7606BEB6" modified="2025-10-08" version="1">MTQLGKNRLRLSDLRDNKGARKKKQRRGRGHNSGRGRKSGRGMKGQKAHSSRLRPGYIGGAKPLYLKIPKRGLRTINVFKNFYKLLPVSLDKIGKWIEDGRLNTAKPITMKVLIDSRITKKIKKGVKIVRGRKVHSVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA5</accession>
    <name>A0ABV2AMA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002236</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SecY/SEC61-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000747">
        <property type="protein sequence ID" value="MES1920579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3370.10">
        <property type="entry name" value="SecY subunit domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002208">
        <property type="entry name" value="SecY/SEC61-alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023201">
        <property type="entry name" value="SecY_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10906">
        <property type="entry name" value="SECY/SEC61-ALPHA FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00344">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103491">
        <property type="entry name" value="Preprotein translocase SecY subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="23"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16426" checksum="BD41EA79741CC124" modified="2025-10-08" version="1">MFAIFFESAILIRSGLYGSFDQLGIGNIVIIASQLCLAGIVVLLLDEMLEKGYGLGSGISLFIATNVCESIFWNCFSPTTLHTAKGIQFEGAVVEVLHVGLRSDRSLKRLFSVFSLNPGCHERRFSEHLQSAIDLRRVLDRHLLGGLQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK1</accession>
    <name>A0ABV2AMK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000836">
        <property type="protein sequence ID" value="MES1920739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17230" checksum="286D343409B9BA11" modified="2025-10-08" version="1">MEEKIDSLRNLRSFELKKGLNNEKDRDVAVNIRNKTWCDQNIIDAINLNFWEGAVLNNDVLLNDKIDKNDKNDKIDKIDKNDKIDKNDKNDKIDKNDKNDKIDENDKNDKNDKNVNEIRAKHKDPFHNFMSWIVSDLDVDFNIGEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AML1</accession>
    <name>A0ABV2AML1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Importin-7/11-like TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002522</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000950">
        <property type="protein sequence ID" value="MES1920910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058669">
        <property type="entry name" value="TPR_IPO7/11-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25758">
        <property type="entry name" value="TPR_IPO11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Importin-7/11-like TPR repeats" evidence="1">
        <location>
            <begin position="313"/>
            <end position="462"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="505" mass="59041" checksum="DD0B4C8CB23B34E5" modified="2025-10-08" version="1">MRKSVNRENVTENQKRIFAFFQSDKMANFLKFVIAKFVPLSHFEIEVFAKIQNFQFFKQQKEWNENSEEFAINYFLTPYVNVHSLALKMMADYANIFPFHIAKFLMSILTKALNSQKSEKSSEIFAVVTVFAVCFTFTRTELSKINFDLVDFLEILLKMAENREENEPLLKLAFCRSFDVLLNSTLFRNESQFAQDKMNVLDRVLKMHIEMLNFNNLTIKLLCDSNLRKMASLNCFRKKIEPTMISGLFAWYAKILNELDETSSKLHVLQSINEMISLFKEQIKVCYARLLNDLAVVFDSKLQEESMLKLEFLDILCTLLETFPFEVERLNDFLIKIILVCTNDKEYSLTERGFELLRIYLFYASSCSGEIEEIFKKALKYFLSKNRAFKTNYDIVQSFLLFKGRSCLSQFLVPIEKVMWSHLDTTKRSELSPLLNSVALIIRILKKESICVDKQLLEKIFVRTCANPIFSSAADFGVSFRALSVFQFFINFLNRFATLKSAELQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS6</accession>
    <name>A0ABV2AMS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002448</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000886">
        <property type="protein sequence ID" value="MES1920814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47396">
        <property type="entry name" value="Transcription factor IIA (TFIIA), alpha-helical domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17369" checksum="E545512378B70E82" modified="2025-10-08" version="1" fragment="single">MSNYPDELRNRKTTNEVRLRNGRIVRGGDSCYEKLQKSFYTLIDAIGLFRQKQNIFPQNIKYFELLHLKQSAMSSINSTSKEATRIYKTVIKDVIEKTQKDLEKIGYDQNKAIELSQKLKSLWTLKIKQRNVINFDSDRTISAETTANT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT9</accession>
    <name>A0ABV2AMT9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002589</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000998">
        <property type="protein sequence ID" value="MES1920983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="88"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="190"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="199"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="209"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="255"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="330"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="36865" checksum="C7281BD1986F5DBA" modified="2025-10-08" version="1">MSGNLFAYGDHSNDSSDCPDPSVAFESLIGSLGKPKFLPQLGATVAFGSPISLTPFSPITSSIFLLFISSIVIPLFISTILLPSLSLFISAFLLLSLSLFISAFLLLFLSLFTVPIPSTLLSFSSPSFFNLFCRSLTSPSKCFVFCISNSSPSAVLFSLSKSDSVNVEDVGNLVAEYRAGSFDDDQSSQLFAFGNPPEYPDECPDECPDERSDVDRDGGSDGCSDEGLNGGFDESPDEPFDECPNGIPDVNPPNEHPDGNPDERSDVGVGVGLGVGRDGCSDGCSDEGLNGGFDESPDEPFDECPNGIPDVNPPNEHPDDNPDDCPDVGVGVGLGVGLDGGSDGYSDGCLNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW3</accession>
    <name>A0ABV2AMW3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002615</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001017">
        <property type="protein sequence ID" value="MES1921011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PROTON/GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865:SF7">
        <property type="entry name" value="PROTON_GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="23"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="204"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="244"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="314"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="350"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="442" mass="49735" checksum="537432CC60836541" modified="2025-10-08" version="1">MCVCRSEDVFSRVQKFFVFPSKYVPPILGICFGIGFGFVFRNLGIPNDAITLIQLIGDLYFNGLKAVMLLYLFVSMVLNSIKIASEKNACSLMIITLLSFTTGTILTSLMGIGAMKVVEPYITKADTSNIQYKHAESDITKTLEQLFNKFLPSNYVAAMSQNNIPGTLVFGMCFGMFAAGVIKSRMQKDKKNYMQDILELTEKSLMRIVDFLILVTAVGVFSIIASQTLSLKNIDVLRKLLIFLIPYVICNLLLTYVLTPLIFCFSRGNRFAGLKKYAYSTCIGFITSSGVASLNPNAKVVEEFDVPENKSKFLLTLALMFETNGSCLYIVMLMTFVSKVYDIPFPLPKRLLLAFIINFICLSLPPIPYGTVLYFPMVGSFFDVNIPLEIMSLLIMWDIVLDRFVTVFKSALKPVQKLNSVTIFNHVHDKKRCRISVRMLEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND1</accession>
    <name>A0ABV2AND1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">dolichyl-phosphate beta-D-mannosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.83</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002740</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyltransferase 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.83" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001123">
        <property type="protein sequence ID" value="MES1921171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039528">
        <property type="entry name" value="DPM1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43398">
        <property type="entry name" value="DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43398:SF1">
        <property type="entry name" value="DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycosyltransferase 2-like" evidence="5">
        <location>
            <begin position="2"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19399" checksum="D080937C6B3D857D" modified="2025-10-08" version="1">MFAQSKGEFVVIMDSDLSHHPKFIPKFVEAQKSDDYDIVSGSRYSLLPRSFKFAKKLVENGGVYGWNLKRKCFSTIANIFAKVLLGTRSSDLTGSFRLYRRKTFSDLLKNVKSLNFNFQMEIMARAEHSNFKIKEVPITFVDRIYGHSKLGIGEIVNYIKKVIELSVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANF3</accession>
    <name>A0ABV2ANF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Kinesin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002759</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001141">
        <property type="protein sequence ID" value="MES1921192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047149">
        <property type="entry name" value="KIF11-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001752">
        <property type="entry name" value="Kinesin_motor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47970:SF12">
        <property type="entry name" value="KINESIN FAMILY MEMBER 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47970">
        <property type="entry name" value="KINESIN-LIKE PROTEIN KIF11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00225">
        <property type="entry name" value="Kinesin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50067">
        <property type="entry name" value="KINESIN_MOTOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="3 5" id="KW-0505">Motor protein</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinesin motor" evidence="6">
        <location>
            <begin position="1"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="77"/>
            <end position="84"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12489" checksum="4B56F0B3110B9C34" modified="2025-10-08" version="1">MQFERLKSKSLKLQNNEKEITINQIEKRISLSSTVKKFNFDRVYDEFTEQEYLFEKTVTPIIREVIEGFNCTIFAYGQTGTGKTFTIEGEIDYNLALNCNFFKFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM0</accession>
    <name>A0ABV2ANM0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002811</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001197">
        <property type="protein sequence ID" value="MES1921257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="245"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="276"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="277"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="294"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="305" mass="33379" checksum="A87EA6C4FCA8B2EF" modified="2025-10-08" version="1">MVSEQCTKRCIKGYGIILSSNKFVQRLIVTCSITKGKVHRFDNNAVCAKIPLCPKTAIPNGKYSSNCGTTVGQTCIALCNEKFLPPSTTLKCEFKNRQSHFNPQTVTCKKVQCPGMTKPSIGVDLKKCATPTNVDDKCNWGCKAKFKPHKTTSTIAICQFAKKTNTGTWSVVPKCDPVFETCGLPQDKSIDVSRCQQKIADDECVAICPDGRIVRTKCTKTSNAKPVFSPPIVCSRKKDETERNLVYGLSGAAIGIVILILIVVTVICCRRKHASEEIEEQSESSDENTKRSNSDSLSTKSPVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP27</accession>
    <name>A0ABV2AP27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ku70/Ku80 N-terminal alpha/beta domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002954</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001338">
        <property type="protein sequence ID" value="MES1921421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005161">
        <property type="entry name" value="Ku_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03731">
        <property type="entry name" value="Ku_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ku70/Ku80 N-terminal alpha/beta" evidence="2">
        <location>
            <begin position="45"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14545" checksum="D2EB335D3ACAC193" modified="2025-10-08" version="1" fragment="single">MQDSLFTETELSSDNDDKSKNEEKMDKEVFVFLIDFGSENIDFVKIAINKIIELAKNILYDRSIDEISVTGFNKSSRKNSHGFKNIDQILTLDRLSIDKILFLKNYLAKISDFKYEKSTTNIYEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP29</accession>
    <name>A0ABV2AP29_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002956</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001339">
        <property type="protein sequence ID" value="MES1921423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11266" checksum="F293E6F3EFDE1E0D" modified="2025-10-08" version="1">MEASLKQNCNIKLGDEEKNGLTKQLQTQRKFYSSSALTIFYTNRMEQKLASENSGGNQSFCDNEAIAFLSEGDEKNINFIKIVFNKIRFHKKFRSSTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF2</accession>
    <name>A0ABV2APF2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Heat shock protein 90</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003086</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001479">
        <property type="protein sequence ID" value="MES1921557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00183">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="299" mass="34436" checksum="0E1587544C906CCB" modified="2025-10-08" version="1" fragment="single">MNMEGALWLKDPKSVSEIRHSEFYKNMTNAYDSPMLHIHFRKDYPIALNSILYIPKYHSEKYGNARMKPGVSLYSKKVLIQKNSTELLPDWMRFVKGVADSEDLNLNISRDSTQSKSTLSRIGSILTKTLIARLKETIKNDPTKYEQFYEEYALFLKEGVCTDSENKDALAPLLKFDSSKIDNKSKKKLEDKNDDLKSSESSKEKISSLKEKISGRTFDDYVGAMDGQQTKIYYLVTSNRSAAENSPYFESFKKKGREVLFLYTPIDEFVMQGLGSYKNRKLVSIESAKLDEEDMDQFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW0</accession>
    <name>A0ABV2APW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquitin-protein ligase E3A N-terminal zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001640">
        <property type="protein sequence ID" value="MES1921695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.130.10">
        <property type="entry name" value="Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain (AZUL)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032353">
        <property type="entry name" value="AZUL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042556">
        <property type="entry name" value="AZUL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16558">
        <property type="entry name" value="AZUL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-protein ligase E3A N-terminal zinc-binding" evidence="1">
        <location>
            <begin position="24"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18065" checksum="BB9F2EC8A3500BFA" modified="2025-10-08" version="1">MSDMSNWNETANNKKSKNNEEQLKQLFQKAFNQFTSGCGRLLCENNYCASNPKFGLLSQSDAIKMALIQIRNRSSDFYICDIIESIKAQEISQNAKFGDFSQFVERSFSSVEILEISFLTDNGANCKEILSNKKSAIDYKGLEIAYEIILKNVFILNLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APY4</accession>
    <name>A0ABV2APY4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Mitochondrial carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003265</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001696">
        <property type="protein sequence ID" value="MES1921736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050391">
        <property type="entry name" value="Mito_Metabolite_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45618">
        <property type="entry name" value="MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 8 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="48"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="144"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="237" mass="26997" checksum="30E4853A40DE9E20" modified="2025-10-08" version="1">MLTKEGVSSFYKGSGFALFRAFVNTSISMSLYKPILNMIYKENSNKQTPLYPKIISASISGALTQLIACPVDVIKVRLQADGHLLKPRYKKTIDPLIKIFRHGILKFWTGLLPSIQRSTISAGCTISTYSHSKQLLINKLNYADNLLCHVISSFISGFVASLFSCPFDVIKTNIQFQSMSKPKYTNIFQCIRYITRREGVRGIFKGFLPIYYRLGPWQLIFFCTYEQLSKICTGDYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ14</accession>
    <name>A0ABV2AQ14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003296</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001741">
        <property type="protein sequence ID" value="MES1921765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15690" checksum="C294A31DF392BF3C" modified="2025-10-08" version="1" fragment="single">MSVDHEIEKFVRMPLKSKSDLVLFEKMASKKILFSDNVETQDAKIFYDAPNNIKKSERAFPILIIISNIAVFAIFAIFIVFAKLYYFLTLFVLLFPCSYFLVKIYNGPGYVEKGTLRFDQNVFSALDTKGYSYCGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ15</accession>
    <name>A0ABV2AQ15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003297</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001741">
        <property type="protein sequence ID" value="MES1921766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="235" mass="28092" checksum="1B577E547134C22D" modified="2025-10-08" version="1" fragment="single">MEIKNNLIECRQDFFKNRQKRFNEISELIQSQRDKLAPRTEFNPSIEDLRKTKNLITELENRTWDETFKTQNIKNAITTEKRFPLKEMTNVLKRKIVVDNQKTENYKSPEKSNLSPKIDLSPIKNVSNDKIDFSFQLETIQKEYDLVKDFIDNVPKNIPEYFNLEKKLRLLKSKQKTIEFRSKYSQKIVNNQIDLTKNDYSQKNIKNGLKSSNEITIFSNKNDKNNIYTNYDYKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA6</accession>
    <name>A0ABV2AQA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003381</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001849">
        <property type="protein sequence ID" value="MES1921845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="14906" checksum="A12E224AC1BB5A94" modified="2025-10-08" version="1">MDPIAAVVSTAAQFSPLTRITIPNMTANRFSSQGLQAPQGLPVAEESQRLVLCALNLGNRGPPGFPGLPGPTGMRGKPGFDGGKGSDGCPGEQGAPGHTGPYGLRGQRGPPGPKGVCGPQGPPGATGYKDCGYAPVYMPQCCQPFCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX5</accession>
    <name>A0ABV2AQX5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003593</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002183">
        <property type="protein sequence ID" value="MES1922075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="78" mass="8346" checksum="22AE8BCBEDCEA932" modified="2025-10-08" version="1">MVMSGILSTSCPITDLLQTLVSSSVCEATAASSAKNRVSCTLVFVLSMVRLKRRPSVLACMYTPPSQTYASATDRNVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR04</accession>
    <name>A0ABV2AR04_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003426</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001911">
        <property type="protein sequence ID" value="MES1921896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051334">
        <property type="entry name" value="SRPK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634:SF9">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="10050" checksum="00D08792D674C520" modified="2025-10-08" version="1">MIELIGPMPMDFIKNGGFPKKFFKPNGKLKIIAQIDEWKLEDVFREEFGFDRITVQKLTDFILPMLQLDPKDRISAAEALNHPFLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR34</accession>
    <name>A0ABV2AR34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Charged multivesicular body protein 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CHMP6_1</name>
        <name evidence="2" type="ORF">MHBO_003646</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002260">
        <property type="protein sequence ID" value="MES1922131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15708" checksum="AB4F495C60E9BB91" modified="2025-10-08" version="1">MLKIKKNLEFLLDNRIKNLNNLDMILLEINSLYVNVLTFDGLKVGTEILSNLNSNIDLKKIDENLFNLNNILEESKNVSEVLSEDITKLPNYENDDELLEELENDLNGISNKRKREESNAKNKKFSEERKVVQLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR51</accession>
    <name>A0ABV2AR51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein TIC 214</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003674</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002305">
        <property type="protein sequence ID" value="MES1922158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="171" mass="20458" checksum="F69D62021CF827C9" modified="2025-10-08" version="1" fragment="single">TKKPYFPTFEEFRNLLNFNNDYDEEGNIRSNRNTKNYFLNKTENEKFFNSNKISLPKNQPLFHKNKNFSRSKNFDRQTRKAKKRKLKAIPQNLIKYDESEKVSINLPINKRLFKEMARRSENNLDKIKMKSGAVITQEKEKNTNFYIFLSISGTKTKVREALIYIEQMTIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI3</accession>
    <name>A0ABV2ARI3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003579</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002157">
        <property type="protein sequence ID" value="MES1922061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13536" checksum="B9BD6D81D84DFD7E" modified="2025-10-08" version="1">MINYDERLKCFFFLRNKQEEPPVENPWSNSIKGGYLTVLNDSSQERSVSDVYNSIDELHFTEYEEPPVPIPCSTFINGGYLTGLDDSSQGRSVSDVYNSIDEMHFTEHEEETKDTHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK7</accession>
    <name>A0ABV2ARK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003822</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002572">
        <property type="protein sequence ID" value="MES1922315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="33961" checksum="074B630AE99B0C06" modified="2025-10-08" version="1" fragment="single">MKEEKVEIMGDDGEFTVQWIPRVPGKYKVTIRSKENALLLDKEYNVQFVPCPENSTLKRADNEDKAFEEITHLKFHLNMLTRSKTPLPSAYTSSLNLAFDKLEHRSSKDEDRKPETKISIDPQKDDKGTHICSFATDTAGVYEINATLDGKAVCSNGVTVVFEKKPLWELHGEFKSCLPNTRQKIKLVHKDREGNRIPSNDQLRCEVRKRGEEAEDIEKSGDDVEREFEWVASVSGIYDICVELNGVSLYKFEGVMVRNELSAQNSLLECLNKAVIETEQPIKYQITLNDKNADCVGQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP1</accession>
    <name>A0ABV2ARP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003842</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002604">
        <property type="protein sequence ID" value="MES1922335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15462" checksum="8AF3ED025C3D78EF" modified="2025-10-08" version="1">MLELYNRKKNESKNSPESKKFFESIRKEIESVLNDMNYLSKSNIAKKDSPSKILSTSEKSVQLILKDTLKKKKLEDENTKTKSNKTPKKSPKLEVNSLIEDSKYRKMRKIAKESVIKSSGKTSIGRTKGFNSNSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ6</accession>
    <name>A0ABV2ARQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003862</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002648">
        <property type="protein sequence ID" value="MES1922356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22137" checksum="5BFA13E95594C57D" modified="2025-10-08" version="1">MKIFNINKSNNLVLDDDEFSQNGFSQNNRLSDKILVTNKFCEISNIFFYPILNEINENFSNKTSKLNGNLATQTLISLWKMIELCENKSKKEKMIFDLIGAILTFVNNYEKSKNKQREAFFKGILFVLLKITNSGNFSFLVKKFEKSIFYKLIYFVENIAKSVISEDSVIQAAFTVSLNLKNMSDRLNLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI5</accession>
    <name>A0ABV2ASI5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">tryptophan--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Tryptophanyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_004148</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.2" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003277">
        <property type="protein sequence ID" value="MES1922630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.240.10">
        <property type="entry name" value="Tyrosyl-Transfer RNA Synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002306">
        <property type="entry name" value="Trp-tRNA-ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10055:SF1">
        <property type="entry name" value="TRYPTOPHAN--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10055">
        <property type="entry name" value="TRYPTOPHANYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01039">
        <property type="entry name" value="TRNASYNTHTRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="24911" checksum="F9FE803F967B92F1" modified="2025-10-08" version="1">MYKNVLEIQKRVTFNQVRAIFGVDTSSSIGKIAFPAIQAAPSFPSTFAECFNGKKLRCLIICAIDQDPYFRMTRDVAPRMNQHKPSLLHCKFLPGLHGVNTKMSASDLTSAIYLNDTPNEIQKKISKSKSGGAQTRYLQKKTGADLEQDVPLMYLRFFLDDDEELKRVEKAYSTGKMETGEVKEMLIKTLTPILLNLQKKKNAVTEELIKKLTTVRQLMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN0</accession>
    <name>A0ABV2ASN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004203</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003410">
        <property type="protein sequence ID" value="MES1922681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6718" checksum="C70442B5E37EA8D6" modified="2025-10-08" version="1">MSYRNWSLKSDFKHWYPCWYLYSSKLRVESDSLPCLNTCFVDSSNIKKLLTSNFTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN1</accession>
    <name>A0ABV2ASN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phlebovirus glycoprotein G2 fusion domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004002</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002923">
        <property type="protein sequence ID" value="MES1922484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="98" mass="11058" checksum="BA0B9C0841B0A05F" modified="2025-10-08" version="1">MTFSQEPRLRIHRNLCHCLKTINPRLHCILPYKAKAYHRPQQFIDYTVTTAVNAAAATTCNIKCTGNSCVTTNIWNDYCTSAATKVIVNQRDSTTPVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST4</accession>
    <name>A0ABV2AST4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">3'(2'),5'-bisphosphate nucleotidase</fullName>
            <ecNumber evidence="2">3.1.3.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">IMPAD1</name>
        <name evidence="3" type="ORF">MHBO_004014</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the inositol monophosphatase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.7" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010002962">
        <property type="protein sequence ID" value="MES1922496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.540.10">
        <property type="entry name" value="Fructose-1,6-Bisphosphatase, subunit A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050725">
        <property type="entry name" value="CysQ/Inositol_MonoPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43028">
        <property type="entry name" value="3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43028:SF5">
        <property type="entry name" value="3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56655">
        <property type="entry name" value="Carbohydrate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14587" checksum="661B5BDE5C3C2E57" modified="2025-10-08" version="1">MELLQPKNIKLSNLLSVCIFSAEKAGKEIIKIHKNGFKTFDKSFNQNFGRRVKSFDPCTEADIKSQEIIESALKTEFPGIFIIGEEKTSSAKKVAEKSNFGNISFKNSENFDVTLLLKDIIVWIGFYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV6</accession>
    <name>A0ABV2ASV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003596">
        <property type="protein sequence ID" value="MES1922753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26978" checksum="ED7B40D63D2E9BCD" modified="2025-10-08" version="1">MEKEKRNYRKYLGDDAIQIPRTTKYRKKLNQVNQSLDVQDVYDGLHETLISARNSEELKDENDFGIGEDQDNMEDSYDAQSLDFIDDDELHHDMLDFQECDYNLEDDVIDDFICSGSSLSFHEFAVLIMTLKTVFNLPCIALSFILKIMKSAMPPSNRVPSLSKLYEYFQGKDDLLKKHFYCSNCDNYIEDIQNFTECGKCNNKETQFFVEIPLKEELKSILESMYFMPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY7</accession>
    <name>A0ABV2ASY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004023</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002981">
        <property type="protein sequence ID" value="MES1922508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="14881" checksum="F235E641C4A6D0B5" modified="2025-10-08" version="1" fragment="single">ATTLYLFALTTISGVVILIEALAVFYGLFSLLLACYVARLLIVLNDFKLGWFYKNLPKMLFALFGATGTLSLAAIPATYLLAVTPSPKTETSALVLSATMVVFHLFLYALAASAFYFSGNDGFRLKRETFSVTTIGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT01</accession>
    <name>A0ABV2AT01_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004323</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003748">
        <property type="protein sequence ID" value="MES1922798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12621" checksum="B35E2796ABAE3126" modified="2025-10-08" version="1">MNRAEKKNMIKEEWKSPYFVMLGINAHLRECAVDFDRYMSSNTDALSTKHGEQAGKSLLARELNKELMDLLILLEMKRDNDCWDIYDDRINRFIEKYDEEQRLTNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT46</accession>
    <name>A0ABV2AT46_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004357</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003835">
        <property type="protein sequence ID" value="MES1922830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="83" mass="9772" checksum="9AA4BC87654AB98F" modified="2025-10-08" version="1" fragment="single">MHLANYPEHLRVEELLSGLYYFYKNSPLNQADLRRACEFLTINKVILRLGGTRWMPHSHRTLENVWKCYPAVVSHLQTVTSMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD4</accession>
    <name>A0ABV2ATD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Minichromosome maintenance protein 5</fullName>
            <ecNumber evidence="1">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">MCM5_2</name>
        <name evidence="1" type="ORF">MHBO_004459</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010004070">
        <property type="protein sequence ID" value="MES1922930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8213" checksum="FCA3DC21AEBE3E36" modified="2025-10-08" version="1" fragment="single">MELSEIANVKHVKEAIRLFQTATMAAANAEGESDLSLEENSSEFLKSVQRAERHLRRRLPIGTKWSFTRIVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI2</accession>
    <name>A0ABV2ATI2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MyTH4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004497</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004184">
        <property type="protein sequence ID" value="MES1922965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.530">
        <property type="entry name" value="MyTH4 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000857">
        <property type="entry name" value="MyTH4_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038185">
        <property type="entry name" value="MyTH4_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00784">
        <property type="entry name" value="MyTH4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51016">
        <property type="entry name" value="MYTH4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MyTH4" evidence="2">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="91"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="91"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12788" checksum="D7C0E3A7265AEC6C" modified="2025-10-08" version="1">MRDELFAQLIKQTTDAPEELMVRGFRLLFLSLRAFEPSEKMVTVLLGHIAATVNIASLKDAQWNFATSFIAANIQRRQRCDKLLRPDGKLQERQIGSAERRGDCCDNGNNPPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL6</accession>
    <name>A0ABV2ATL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_004547</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004367">
        <property type="protein sequence ID" value="MES1923013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050391">
        <property type="entry name" value="Mito_Metabolite_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45618">
        <property type="entry name" value="MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 8 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="70"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1923013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="17860" checksum="CCD47DE8C2CCDE32" modified="2025-10-08" version="1">MQSDAGLPLEQRRRYRHAIDGLLRVLKTEGVSGCMTGLPTNIQRAIVITIAQFISYERAKGLLLRNGFADGLSTHFASSMISGLVTVTLSNPVDVVKSVLMSSPHGKKLSGLSCALQLLKSHGPLYFMKGWGPAYVRLGPHTVITFIILEQLKKFPLLQKSNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT2</accession>
    <name>A0ABV2ATT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Regulator of nonsense transcripts upf2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">UPF2_4</name>
        <name evidence="1" type="ORF">MHBO_004611</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004553">
        <property type="protein sequence ID" value="MES1923074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039762">
        <property type="entry name" value="Nmd2/UPF2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12839">
        <property type="entry name" value="NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12839:SF7">
        <property type="entry name" value="REGULATOR OF NONSENSE TRANSCRIPTS 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="23128" checksum="A024FCC4CB990173" modified="2025-10-08" version="1" fragment="single">ITTIIISLKITKTDEINGLLRLCSLLNNEYTDFAENLEDLLIKEIDKEFSVFSKFQRRLGQGTEQPIDLNEFATKQRKNLRLLTEFVFVKIFEDDAILVETVQKFMKKELKDKTFVILSILSNFIKYAGEECTGKMSKSLRSCYKTVSTKPEKKPRVLEQSTFTELKKILLAFFARRFNKLKELKELKLFFYANFFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU09</accession>
    <name>A0ABV2AU09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phospholipid-transporting ATPase IC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ATP8B1</name>
        <name evidence="1" type="ORF">MHBO_004690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004885">
        <property type="protein sequence ID" value="MES1923145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.150.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF150">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="Calcium ATPase, transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="20908" checksum="BA7FE1E738ECA2C3" modified="2025-10-08" version="1" fragment="single">KRRKEDRIENDALVSKYDHETDSWIKIKRKDIGRGDILCLGKNDPVPADILLVQTSLPGGLCSISTTNLDGETNLKIKRSFEEIDFMDCPNEQIEKAKFKKTLNGYIKGEPPNVRMGSNGWKGFLYYQNGEKSSTVALDMDQFLIRGTVIKNTDWIICLVIFVGNETKIQQQDRMKKYILKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU16</accession>
    <name>A0ABV2AU16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003927">
        <property type="protein sequence ID" value="MES1922867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009319">
        <property type="entry name" value="Phage_A118_VSP1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06152">
        <property type="entry name" value="Phage_min_cap2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="82"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12259" checksum="04FD45CA5AFD9091" modified="2025-10-08" version="1">MFPIILGVSKPVYSKAELKQRHAVANQVKTYKVGDKEYKTTGYDSTQTQRRYETTLRRLKDERDALKSAGDTLGAKQLQQRITEKSKEYRNVSEQLGLKPKPNRTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU24</accession>
    <name>A0ABV2AU24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004932">
        <property type="protein sequence ID" value="MES1923160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050896">
        <property type="entry name" value="Mito_lipid_metab_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46434">
        <property type="entry name" value="GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46434:SF1">
        <property type="entry name" value="GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12168" checksum="7FCC0AFA640D96C1" modified="2025-10-08" version="1" fragment="single">MFPGTTLDTIEYSLVSQHSMVRVYDTPGILNSSQLACRLNFDELRELIPTKRLKPRTFKLATKQTLILGAGLGTLSLVGGEPIYCTIYLPGKVSIHITRTENVENMIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU51</accession>
    <name>A0ABV2AU51_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004743</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005068">
        <property type="protein sequence ID" value="MES1923200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="33"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8663" checksum="917572ABB45AC708" modified="2025-10-08" version="1">MTEQQNIPENKKEDKTDNKKEDENDLVDFTATLKRKKKKKKAHKITPAKQENADDKQDARKEYTYLEVGHFQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB7</accession>
    <name>A0ABV2AUB7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Macro domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004799</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005313">
        <property type="protein sequence ID" value="MES1923254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="entry name" value="Leucine Aminopeptidase, subunit E, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002589">
        <property type="entry name" value="Macro_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11106">
        <property type="entry name" value="GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11106:SF111">
        <property type="entry name" value="MACRO DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01661">
        <property type="entry name" value="Macro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00506">
        <property type="entry name" value="A1pp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="Macro domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51154">
        <property type="entry name" value="MACRO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Macro" evidence="1">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16729" checksum="80E2FBDAAA21BD9B" modified="2025-10-08" version="1">MEFEVETLKVKIYQSSILDVKVDTIVNAADEYLTNGSGVSKAIEDAGGYEYQKGCETLLKLHGPTLKTSHVYDSRRGRLRDKFKVILHAIGPRWIDHEDKEKCLFLLMETVESVLKMADSLVTTSLAMPAISSGTTNFQIQHCNIFAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC4</accession>
    <name>A0ABV2AUC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004807</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005359">
        <property type="protein sequence ID" value="MES1923262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="5959" checksum="7E2FA1FA59E1F51C" modified="2025-10-08" version="1" fragment="single">AGHSDDPILIDMTKPLAGEVMDGDVLGQDLTYQAVDDEICASWKGFYDPESGIEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF9</accession>
    <name>A0ABV2AUF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004601</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004526">
        <property type="protein sequence ID" value="MES1923066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6724" checksum="EB1EB1DF0817B511" modified="2025-10-08" version="1">MHKPYILLVEFGSNKLHVPMDDVNWEHSADFGRKIFFRVVYEKPAKVLVVSEKDICF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ3</accession>
    <name>A0ABV2AUQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004946</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005930">
        <property type="protein sequence ID" value="MES1923382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="18993" checksum="5542DBDD5FD4EC43" modified="2025-10-08" version="1" fragment="single">MDTDITDALKDDFVKSGKFMVATANTETVNKLAEVIYNKGATLQSIGNAEEAVKFTGEEIPKFENGNGKPTPQYSLGTPMDSTEVTKADLESLPLVKKVTGRSGDYRVHFRNGISVPLKTMRVTGPDAYVITPEGERLVKKGWYDKNDGITITQYGDKHTASHEMYHFAEAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR9</accession>
    <name>A0ABV2AUR9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004964</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005998">
        <property type="protein sequence ID" value="MES1923398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16988" checksum="BE21AA49FA701734" modified="2025-10-08" version="1" fragment="single">MSTLVENLVKRDPEKRPGSTEDLLVKKLIPFELVDSSLNNVLEELSKSDSVFRSKALKKLFSSNMPGHLNYTYDSLMIGSLFFTNFAKIFRSFILTKRNDDNLNKKRIKANLSKRIREIFEKHGFFNFETPLLMPSIPGKKNNGRLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX2</accession>
    <name>A0ABV2AUX2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">coproporphyrinogen oxidase</fullName>
            <ecNumber evidence="4">1.3.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_005038</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (O2 route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the aerobic coproporphyrinogen-III oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.3.3" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010006312">
        <property type="protein sequence ID" value="MES1923464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1500.10">
        <property type="entry name" value="Coproporphyrinogen III oxidase, aerobic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001260">
        <property type="entry name" value="Coprogen_oxidase_aer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036406">
        <property type="entry name" value="Coprogen_oxidase_aer_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10755">
        <property type="entry name" value="COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10755:SF0">
        <property type="entry name" value="OXYGEN-DEPENDENT COPROPORPHYRINOGEN-III OXIDASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01218">
        <property type="entry name" value="Coprogen_oxidas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00073">
        <property type="entry name" value="COPRGNOXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102886">
        <property type="entry name" value="Coproporphyrinogen III oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16266" checksum="0A4A76612C815A27" modified="2025-10-08" version="1">MEPIFTKKNDFRRRMESLVLTAQEKITEQLSKLDGNRFKRDKWFRKDGSGGGIVNYIQNGNCFEKGGINVSVSFGELPEAAQKHMLEKSEKISDYLKNSRDNVRFYSASMSSVIHPLNPHVPTIHFNYRYCFLCCDSGEFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV39</accession>
    <name>A0ABV2AV39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005106</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006621">
        <property type="protein sequence ID" value="MES1923522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="11431" checksum="BD752383FD94D3E7" modified="2025-10-08" version="1">MKGLKQHFDPEGIKRQFYYNFKKMFFTYRKAKNIIFYFQTGRARLAARKPHVFAILCILGFYSAIRTNRFVRKRKLIREWNDDLALYKKQQNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB3</accession>
    <name>A0ABV2AVB3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DED domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005211</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007170">
        <property type="protein sequence ID" value="MES1923607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.533.10">
        <property type="entry name" value="Death Domain, Fas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011029">
        <property type="entry name" value="DEATH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001875">
        <property type="entry name" value="DED_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50168">
        <property type="entry name" value="DED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DED" evidence="1">
        <location>
            <begin position="2"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="11004" checksum="68B2978D2E28E4C6" modified="2025-10-08" version="1" fragment="single">EQHDNLLQGIVEYIDCNDYTLKKWKWYCRGKIKGGFSSLKEKEVFDDFEQLEAEGLLSPGNYGILKDFFTNSETNVKALDLIDDKVIEMYWLIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVW2</accession>
    <name>A0ABV2AVW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005043</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006325">
        <property type="protein sequence ID" value="MES1923468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6041" checksum="92D697B51F035ED8" modified="2025-10-08" version="1">MSSTPGLVYYFMACKVNSRFNNVKECRHYTIIAALGVVIVAGTCKIHYIDVVIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW15</accession>
    <name>A0ABV2AW15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005193</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007053">
        <property type="protein sequence ID" value="MES1923594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="137"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="79"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="151"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18137" checksum="DD73DB1D2368C915" modified="2025-10-08" version="1" fragment="single">LKANIDDILSEGQITPAEAEDLIKKSITNLLDQGEISNFEGVKAFVNGFEYAVRKYSENIIAEREEAKEDPETPTEDIAAEVTKEVEQEVEQKEAQKDKREEAFKEKETYLKDQGIETEKLTKKEVEEGHATISKAQETAAQEQETALEDLETRFKDPNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE39</accession>
    <name>A0ABV2AE39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000008</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10448" checksum="D0E26FBBCF808260" modified="2025-10-08" version="1">MRALHDYLINNGDLKSISFVVFVDEIFNHPNRVQFPKLQPVASSHGIARLMSAGIAPESRKVDSLIDQDKLKLIEASKLESEIYKKSFCLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE66</accession>
    <name>A0ABV2AE66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005304</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12449" checksum="735B8498EE49F45B" modified="2025-10-08" version="1">MDENHLKFDEISKIFSLFFNIKDQMIYNKKKTSKADSIPTHLRRNLPDSELQISLNHFEHIDLLQTESCFGHPGNFQYEMRCSIKELEKRALKLAVKWTTTHPKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC6</accession>
    <name>A0ABV2AEC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6931" checksum="C0FF9B87834D35EB" modified="2025-10-08" version="1">MYSSSIKSGSSTVAWSAGQKWNLWHWMTLPWLLQMLARSSTIYSKQNKPLRFSLNKGKDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER2</accession>
    <name>A0ABV2AER2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000196</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6665" checksum="36E3DD53D35EF730" modified="2025-10-08" version="1">MPKNNLLALMMIQLILMPPTKDSLKRILTILRLTNMKQYQEQTMANGQMTFYYNKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEU7</accession>
    <name>A0ABV2AEU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Matrin-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000212</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000690">
        <property type="entry name" value="Matrin/U1-C_Znf_C2H2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003604">
        <property type="entry name" value="Matrin/U1-like-C_Znf_C2H2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013085">
        <property type="entry name" value="U1-CZ_Znf_C2H2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017340">
        <property type="entry name" value="U1_snRNP-C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31148">
        <property type="entry name" value="U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31148:SF1">
        <property type="entry name" value="U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06220">
        <property type="entry name" value="zf-U1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037969">
        <property type="entry name" value="U1_snRNP-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00451">
        <property type="entry name" value="ZnF_U1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50171">
        <property type="entry name" value="ZF_MATRIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Matrin-type" evidence="8">
        <location>
            <begin position="4"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="12843" checksum="2520814D7454438E" modified="2025-10-08" version="1">MGRFYCEYCDIFLTHDSTGGRKQHMHGRKHYDNVRQYYSRYLPQTSFPNIVSPFMMGPGPNAGMPPVGVLGAQGLPLSFPGGPPPPFPMQPGMVPNFAPGMMPPTMPNFNPNQTNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF48</accession>
    <name>A0ABV2AF48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14236" checksum="3A6F100913CCA9E4" modified="2025-10-08" version="1">MGRTHFFKRSLYPFSKTRIGRRTLKNAAKDDVLTIGEKLKSLSKYFRRTINVFTKSRDSDENDGKGDEFVQIAVFGSYSLNNRINLLLEKDSFCLLVNNEDMIDFNLSDEKLMLQAKLDYCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF53</accession>
    <name>A0ABV2AF53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000013">
        <property type="protein sequence ID" value="MES1918084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="21623" checksum="B1C2D43CD319A4A4" modified="2025-10-08" version="1">MDLIDFDNINNLNIKDNYSFTIHRNFSDLDEIHFLPKFDSIVFKGDISLTFIEKFSSNEKVYGKSERISELTFEENKFSKNYPKNFHIFNQDFDFLKIKDFSVNSDAENIKNLLIAILLTNNKIKIYECNQIANYRSWPNLENSDIWGFSLTWIPSICCFILKFSQFVRKQKNSRRLHKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF8</accession>
    <name>A0ABV2AFF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">60S ribosomal protein L3, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPL3</name>
        <name evidence="5" type="ORF">MHBO_000376</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000057">
        <property type="protein sequence ID" value="MES1918408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.960.10">
        <property type="entry name" value="Ribosomal protein L3, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045077">
        <property type="entry name" value="L3_arc_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044892">
        <property type="entry name" value="Ribosomal_L3_dom_3_arc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000597">
        <property type="entry name" value="Ribosomal_uL3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019926">
        <property type="entry name" value="Ribosomal_uL3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11363">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11363:SF5">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00297">
        <property type="entry name" value="Ribosomal_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00474">
        <property type="entry name" value="RIBOSOMAL_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="386" mass="43903" checksum="EA4357DCFFDD54DF" modified="2025-10-08" version="1">MSHRKYHAPRHGSLGFLPRKRCKRHRGKIRSFPRSNPKDKPHLTAFIGYKAGVTHVLRNIKKAGSKSNNKERIEMVTILETPPMVGIGLVGYTKTPKGLRAVTTVWTKYISDEAKRRYYKNWCKSNKKAFTAYSKNFSDKDLKEQIGRINNHCDVVRLIAHTQTNKLRKGFKKAHIMEIQINGGTVKEQTEFGLSFFEKEIPVDSIFSREEKIDIIGVTKGHGTEGVVHRWGVTRLPRKTHRGLRKVACIGAWHPARVAFSVARSGQNGYHHRTEINKQIYRIGNKEMAFTGSTENDPTEKQITPMGGFPHYGEVKNDFLMLKGCVMGPKKRVITLRKSLHPSTVKNSGGEGEKDSIELKFIDTSSKFGHGRFQTSKEKDAFYNRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK0</accession>
    <name>A0ABV2AFK0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">RNA helicase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000053</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00268">
        <property type="entry name" value="DEADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044742">
        <property type="entry name" value="DEAD/DEAH_RhlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47960">
        <property type="entry name" value="DEAD-BOX ATP-DEPENDENT RNA HELICASE 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="5">
        <location>
            <begin position="48"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="6">
        <location>
            <begin position="261"/>
            <end position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="517" mass="59613" checksum="60A8D2713EFF079F" modified="2025-10-08" version="1">MQQIKRRLSTIQMQNKKKFSDFELEDDIQKFLKSVNIKYPTNVQTKVLDLLLRGEDVVFADQTGTGKTFSTIIYSVQRIKNILSERESHILKPGAPLAIIVSPTRELATQILKTAKQISHVARFSSSLLTQSGKIRNQKEELRKGPHLVVGTPGTLIKHIKLKSLDLSEVRFFAFDEVDVLFDKGFVEESRRLKKEAENNFKEDPPFHSTQFCGCSSTIITRNLTYLQRQFPFAYPVVTKMHQVPPKEIKVKFIELGGRDKMQTLHIEIEEMSRKNKKMPMTLIFCNSEKSCAAVKNFLAANSFDVVEMHNGLKQIVNFCTFQDRKNNYETWKSKGCQILVATDIACRGLDTDCEHVFLFDFPVTTTEYLNRIGRTARLGKPGDVTALLNKSDVPFAKRIEYCHRTGKPLNNIASSRPISLKLLKQYGTKKLQHTSEFSIPPQHAKMDSLVADPSKFKRGEMQIRQLANRYSVSNRKSGFKWFYTEKGRNRRWVKNTDKKAFEQELRNNQKIFNKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL4</accession>
    <name>A0ABV2AFL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000419</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the major facilitator superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000064">
        <property type="protein sequence ID" value="MES1918451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328:SF28">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13347">
        <property type="entry name" value="MFS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="77"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="116"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="151"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="196"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="242"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="272"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="300"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="399"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="435" mass="49380" checksum="01DEE5EE5C8C5ED3" modified="2025-10-08" version="1">MVYIIVTRLKLSFENYGKINAIVWSVSAVFDPVIGLISDSVKKNWRRSGFVFVSAIVVPLSYGIFMTSKAINGHNNVVIYCIIVLLIFNLGKSFYKSPYSALASEMSDDKNIKWNFTMVRTVFTNGGCLVGNIYMNLVVGKNSDVEDKNAGIIIIGVYSAIFMFLCQIFCLILLKFPKYKPVEESTESVSRKPWKIWHIVTVYSHCAFIGLMLVNFLVQMSIQIINSNIKQYLDLSVKKSRYFNYCLITILSSVVLGTFLLHKLKDIIEMRWSFIFGLLLLIISFYLFDFWVTDSLAGDFALFSACILNGIGTSAGYYCIRCMLDQIIINDRKLGYERNAVLNGHQSSTTRIGYGAGTLIIGLYLKSFEPELLDPDLSAIDEAKLNEIGIRIKNVTTSFPMILLTLSVLLLLTYPLYEKKHLCKSTRPYDNQKFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV3</accession>
    <name>A0ABV2AFV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000522</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000086">
        <property type="protein sequence ID" value="MES1918570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="92" mass="10772" checksum="2E783F99E225909A" modified="2025-10-08" version="1">MMTAYEDDVWTLGILLKKIADGEDVHYDRNAKRIKIEYSPDLIARDVEEVLEGFLNVDAAERWGLKDFEQIKGKRLFYGLDWDDLPPINQEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW9</accession>
    <name>A0ABV2AFW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000537</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000089">
        <property type="protein sequence ID" value="MES1918590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028389">
        <property type="entry name" value="POT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14513">
        <property type="entry name" value="PROTECTION OF TELOMERES 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14513:SF0">
        <property type="entry name" value="PROTECTION OF TELOMERES PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="305" mass="35399" checksum="02A034A271B76B62" modified="2025-10-08" version="1">MPEFTKLQNVIKSGEYNVSGIIVMSKARKQVRNRATYMISFKIIDQTTNRLTSVNLFSGSNLPVKGFEAPSIFVCLCIKADVINNCNIVLVVPEKSSCRWRVYSCTAKTNIEAFYSSDNLPFPSDYYRIKFLKVFAKKNNFVVSHTCKEIKDLGYGTQNIECQVIEKRNLDNGTILLFVWDGTNNKKKFRYQIERMTDLVINKTKGSFMPIVIEKKTGEQTFKRVLALSEGSWIKFTDLSVTINRGWISVAFSFKTNFQILGDTFYKKKLFYYVVYIIYTSSYQNFIVNDIDFRFQVTEYKYSNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG00</accession>
    <name>A0ABV2AG00_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">L-type lectin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000548</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000092">
        <property type="protein sequence ID" value="MES1918604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051136">
        <property type="entry name" value="Intracellular_Lectin-GPT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005052">
        <property type="entry name" value="Lectin_leg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12223:SF28">
        <property type="entry name" value="LECTIN, MANNOSE BINDING 1 LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12223">
        <property type="entry name" value="VESICULAR MANNOSE-BINDING LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03388">
        <property type="entry name" value="Lectin_leg-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0732">Signal</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047536787" description="L-type lectin-like domain-containing protein" evidence="7">
        <location>
            <begin position="16"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="317"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="340"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="377"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="domain" description="L-type lectin-like" evidence="8">
        <location>
            <begin position="28"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="405" mass="46065" checksum="8D26223FB6DA32D3" modified="2025-10-08" version="1">MSGLIFCFTLISVHSINEENISEVHVHYPINSNADSKNFEYGGSTVATNHFIRLTPSVSNRFGWIKSTKAVESTIFRMDVALRFTGGNRYTNGDGIAIHFFDQPDDTDFFVSQYSAESFYGVNPSQRGFSVVIKTNEDGKVKIFISDNMKAKDRNIDDIFENNAGGSFVTGTCLLNSFGDEKNTIVINFFKEDVYIYFETDKLEFCAAAKLSKTFENFPRFGIGAMTSEQFNNHDIFSVFVKTSRSKNSNKSIDSFLKAGEKSFSESFRLLKNRIKRMFWFAAVISGMLLFLETVWELSLLQHVVNDKLVPKETLNLINLAVPYTNYVMIGLFVYTLLSFRILMAIFLAPIFAFKVYRLTNKKNVLKSDEFDYTKNFNGYSIMLCASVVAYVFYTFLAVGELVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG15</accession>
    <name>A0ABV2AG15_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">U6 snRNA-associated Sm-like protein LSm5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">LSM5</name>
        <name evidence="12" type="ORF">MHBO_000360</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">LSm subunits form a heteromer with a doughnut shape.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the snRNP Sm proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000052">
        <property type="protein sequence ID" value="MES1918389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01732">
        <property type="entry name" value="LSm5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033871">
        <property type="entry name" value="LSm5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20971">
        <property type="entry name" value="U6 SNRNA-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20971:SF0">
        <property type="entry name" value="U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6 9" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 9" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Sm" evidence="11">
        <location>
            <begin position="27"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12029" checksum="7A53B24C8D6D9C80" modified="2025-10-08" version="1">MDQTKIPNKNTKSITKDETAENKSQILPHELIDKCVGSKIWVLLKDQNEVIGTLKGFDEYFNLVLTDATDYKITEKGRTKSTASDLLLNGRNIALLVPGGPPKETKLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGC1</accession>
    <name>A0ABV2AGC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000651</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000115">
        <property type="protein sequence ID" value="MES1918735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20899" checksum="50003B704B532E10" modified="2025-10-08" version="1">MLANIYKKLFTENDRVEHPQRKSLKNRKTKKSDFANSQKAAARQFYTKTKNNYEYNVDAIAEHMDKLSPSQKVQASLFLFGKDLQGLSVDKARELFVKNLPDPEDLYNDEDIKMAVEKEIKEEKAKWNIQDRELENMDDDSFLKFVSKKVDEDEGSSLKAESIRILSDSENKENRKNLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF7</accession>
    <name>A0ABV2AGF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000681</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11780" checksum="3A4806EA3808205C" modified="2025-10-08" version="1">MQIGLKPLKENSVQELYPFYLEMCVLTKRTKLKKGERETLLAECHSIRNCSSNFLRKLILSDNKTKEMQNIKARNLKRYLPESVFGGILENNLKCENCDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGH9</accession>
    <name>A0ABV2AGH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000692</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000125">
        <property type="protein sequence ID" value="MES1918784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046042980" evidence="2">
        <location>
            <begin position="23"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16072" checksum="25841F0AEE9E28A9" modified="2025-10-08" version="1">MNFSASVFIFACAIFLVKTVSASSFADVKIGPFDLICYIQALVVLVFALLLETCLAYRQNIQKSCKCRETRSVQRFYDFQSRRSIFVCCANSLDGLDKSLERLDNGEFQFFVVEKNLVDASSYFVEEVGGHSFEAKRDVRAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ6</accession>
    <name>A0ABV2AGJ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nucleolar MIF4G domain-containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">NOM1</name>
        <name evidence="6" type="ORF">MHBO_000713</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CWC22 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000130">
        <property type="protein sequence ID" value="MES1918810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050781">
        <property type="entry name" value="CWC22_splicing_factor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003891">
        <property type="entry name" value="Initiation_fac_eIF4g_MI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003890">
        <property type="entry name" value="MIF4G-like_typ-3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18034">
        <property type="entry name" value="CELL CYCLE CONTROL PROTEIN CWF22-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18034:SF4">
        <property type="entry name" value="NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02854">
        <property type="entry name" value="MIF4G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51366">
        <property type="entry name" value="MI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MI" evidence="5">
        <location>
            <begin position="441"/>
            <end position="585"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="664" mass="77928" checksum="350F3EFAE123C25A" modified="2025-10-08" version="1">MLYKRFRSKKLTRKEKRKNARKEKKKSRFLKQRGTSHFQNSQRSIKKIIKNDNAIFKNKTSKKDQSSTGIPALDILGRMADNILESAENNDYLENKRTQSQMSKTKKTKNGENKIKSQFFGEKLNLTEKFIPKFKQTENKNIEKNVNTKVRIQINKLTPNNIEIITNEILKLYSDFSQNETNEAIMDCVFDSLFMETEFSDTLAITSSGLIAAINFSNIELNYGYNCKFLDVFFLDKIVNRFSHFYNEKDTLKIQKTMLLIAYLYCFKVIDVKLISDILEKLLNSFLEFDLQMLLIFVKEVSHKLRKENSAIFQQFFNSLNNKFSSLNEKELKEKSKKFKYLVEFINDVKTKNSKDKDIVTKTQKWLKNFICKNGITTKKNSLCLGLSDFTQNDKIGKWWIDLQLKNKNKNKNFDLLNVVKDEKLKKSLFESSGRCGMSTNAQKIIFVLIQSSENGVTALKRLILLFDNAKSKLILPNVERKIQNVLEREIVSVLFKCCSRESDFNPFYCFLFERLATYRKSFGFTIKLYIWDFIKDNVDDEKREIGIFEIKKETKQKLKNMACLTAELILRKVIWLNLLKKLNFDLLRNKILFYVSTLFCYLMVGPKSSDDLIKIFSNLNEPLKESISDFLERTKIKYCGDEDLIGDKQIFAERLNFVVEILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ9</accession>
    <name>A0ABV2AGJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">RNA polymerase subunit AC19</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RPC19</name>
        <name evidence="7" type="ORF">MHBO_000718</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000131">
        <property type="protein sequence ID" value="MES1918815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07029">
        <property type="entry name" value="RNAP_I_III_AC19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.10">
        <property type="entry name" value="RNA polymerase, RBP11-like subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00261">
        <property type="entry name" value="RNApol_arch_Rpo11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036603">
        <property type="entry name" value="RBP11-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009025">
        <property type="entry name" value="RBP11-like_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008193">
        <property type="entry name" value="RNA_pol_Rpb11_13-16kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033898">
        <property type="entry name" value="RNAP_AC19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022905">
        <property type="entry name" value="Rpo11-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13946">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I,II,III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13946:SF28">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13656">
        <property type="entry name" value="RNA_pol_L_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55257">
        <property type="entry name" value="RBP11-like subunits of RNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01154">
        <property type="entry name" value="RNA_POL_L_13KD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="DNA-directed RNA polymerase RBP11-like dimerisation" evidence="6">
        <location>
            <begin position="21"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11563" checksum="515C305789FEF0A2" modified="2025-10-08" version="1">MAFTPKAKIVRQKISDDGLCGTFYFVDEGHTIGNILKYLLAKRKDVAFSGYNVPHPNNNLMTVRVEAKKGHCPVQILKETFKTLIKLCSVLETKFKNAFDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT6</accession>
    <name>A0ABV2AGT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">8-oxoguanine glycosylase ogg1</fullName>
            <ecNumber evidence="7">4.2.99.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">OGG1</name>
        <name evidence="7" type="ORF">MHBO_000753</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.99.18" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000141">
        <property type="protein sequence ID" value="MES1918857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140078">
        <property type="term" value="F:class I DNA-(apurinic or apyrimidinic site) endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.340.30">
        <property type="entry name" value="Hypothetical protein, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012904">
        <property type="entry name" value="OGG_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052054">
        <property type="entry name" value="Oxidative_DNA_repair_enzyme"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10242">
        <property type="entry name" value="8-OXOGUANINE DNA GLYCOSYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10242:SF2">
        <property type="entry name" value="N-GLYCOSYLASE_DNA LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07934">
        <property type="entry name" value="OGG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="DNA-glycosylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55945">
        <property type="entry name" value="TATA-box binding protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="8-oxoguanine DNA glycosylase N-terminal" evidence="6">
        <location>
            <begin position="17"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="338" mass="39827" checksum="FD036F43D7ACB47B" modified="2025-10-08" version="1">MFLSFLLKTEFSLLVKQPGVLSIKNTFESGQIFGWKKFVSSHNSVSQIFYLGTLNNHALAFRQNQGDHRVYTACWDSFGKKVQIGEKKRKEIQDYFNIDFSVSREYETKWKNSLNFNKLYEKFEGLRIINQDIVDCLFSFVCSTNNNIPRIQRMVNDLKQYYGEPIFLEGTKLCLKKFPTVYRMAHLDETDQVRLNLGYRFKYLKAIASFLIKNEEKLTNTKIDQNYNDFTFLNNIKELSYDKAFRELKKLHGFWQFPSQVFETTWVVSITINLELTIFVKVHIYIYCAPAHTLLNVCTRCQIMTIFRRYHCISIASLHSLDKYLIMASLMMSKAFAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH20</accession>
    <name>A0ABV2AH20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000844</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000166">
        <property type="protein sequence ID" value="MES1918961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20578" checksum="9FF97BEFCB975FB5" modified="2025-10-08" version="1">MEPKMRKKFKSTENLKLEETENLKQIKNLKENKEVRKRRGLSDITNKKNFKNLQQTKKPKTSKEKIKIANVKKSRYENESSKSDFSDVEFVYPLEKAGKDKIVKDIFETIVEKITIAKEKIDKLDSPENFTELKIKPDKNREIEEDLAKMSNYKIESNLSFETILSQIAEDCIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH38</accession>
    <name>A0ABV2AH38_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000857</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000169">
        <property type="protein sequence ID" value="MES1918973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19214" checksum="2C8312D224A18FA9" modified="2025-10-08" version="1">MSIDALCNLKNNRFLEKCTFKCKDGLFENNSDTITLHCIENFEAPLCAVELQSDNATIAVELQSVDTEASSKCSMEFAKDGYNFCDIVSRECKNVCIENDIFTIYENCTVGVKGNYEFIDGTVRKDLVCQNIEDIDYFELQLKKYCFLTYSRLRDNSRRKQKPHSCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH41</accession>
    <name>A0ABV2AH41_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Acyltransferase 3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000528</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000087">
        <property type="protein sequence ID" value="MES1918577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050623">
        <property type="entry name" value="Glucan_succinyl_AcylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36927">
        <property type="entry name" value="BLR4337 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36927:SF3">
        <property type="entry name" value="GLUCANS BIOSYNTHESIS PROTEIN C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="237"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="Acyltransferase 3" evidence="2">
        <location>
            <begin position="36"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="30741" checksum="B6BA204C75BD389F" modified="2025-10-08" version="1">MQKSDLLSDTLTNREINGNYNLPFLKQHQTERNVLLDFIRGSSIYLVVLVHILLSIEQVLEQRDALSSSLKARLDLAFRQFIQFGMPLFFYVSGRSTAYTKSNLISGIIKKTVRLVPPLLFGMFFVVIPTQYLSKNFIPQKCSPSGDNSFLEYYKNYVFGINNYFSVCGFWWLWFIVVLYAVSVTNLPIVLEFLNPNFIFVKLVFCIDLKFWALFFEIVFLHKIVVLFVKLLSFGEIILQIFYFLLKLLFFEIAVFSKLLLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG6</accession>
    <name>A0ABV2AHG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Motor activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">Myo22_3</name>
        <name evidence="3" type="ORF">MHBO_000971</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000200">
        <property type="protein sequence ID" value="MES1919105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025640">
        <property type="entry name" value="GYF_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003124">
        <property type="entry name" value="WH2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14237">
        <property type="entry name" value="GYF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51082">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WH2" evidence="2">
        <location>
            <begin position="140"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="113"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="162"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="207"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="219"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="26077" checksum="64D505F47373A456" modified="2025-10-08" version="1">MTIKWHYVTENDETVGPVDENELKSLFAKKTISDKSYVWNGKTVKEWTPISNIPSLLSSVRPSRRAPPPPPKNFPSRSNFGSMQTQGSNRDIYSSNSRIAPPPHRTAPHRDQSNFSSFQNNSNSSDLNNPIVDTPRSGDSRNDLLSQIRQKPNLRSKPIQRPVSSPVATMRTPNRNPIRNEPRQKSILNPAMFRPMQAKKFGNPQRSSSNKSTHLNSSGTSSFQNVKLLNSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ2</accession>
    <name>A0ABV2AHJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000759</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000142">
        <property type="protein sequence ID" value="MES1918863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="146"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="153"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="171"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="209"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="339" mass="38219" checksum="04F9AD0A07985256" modified="2025-10-08" version="1">MASVESSYISKENEIDHASDFSFKRFPSYQHNPTMVYPQMNAMGANVSGAPPLNEGLPNQRNRFLYESRTHNVNQWSQDPQSQQKAIYAAAASAANLDSLYSENNRFGDKVPFLGSFFDRQALRNEFEHFILLKLAAGKETDLTDGPLPSYLATHSKAATSPPTSSPSATEKTETPKKPTEKLLKKQFFDDFPESSSNKNSEQNEERPAQQNYSRRGSAQNRNGDFRAKRYDGNGQSNRYRGRRGNYRGNSRRGDNFRRGNYRGRGNYKKSDEDNFYQKPEQVEELSERSESAEVEPVEEAAWGKAGDSGVSFGDDDNGKNDVSFGDDKKSGEQNVEFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR5</accession>
    <name>A0ABV2AHR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000128">
        <property type="protein sequence ID" value="MES1918802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="199"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="204"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="310" mass="35564" checksum="042A407DD7853821" modified="2025-10-08" version="1">MNFDNNNKNCYNPHNHYLYNNLHDNFYCGGNNDDPYYCNNRLDTSNLDVNNIDDRFGPSCYKNKEGMHKNDNKSYEDYRQYYRHPNHCYQNDRYYRRRYLDDRYHNQVYQGDIECECQYSSESEECPSTQIDTTVVPTSEAPVKTTSVVTTETPIMTTMLTTEIPVTKKPVETTMAATDIPLTQPIETTELVTTVADTTLTPPTELPTPPPSTDSPMSPPPNTMAVTASQKNKEKVDIGDGGFYKEMGNLEEVGTRTLKIPKGYYLQLVPLESFKGGLKNGKIYKNGGERAKDKKKRKVVIKKLVLRKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU0</accession>
    <name>A0ABV2AHU0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000239">
        <property type="protein sequence ID" value="MES1919250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039467">
        <property type="entry name" value="TFIIIB_B''_Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22929">
        <property type="entry name" value="RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22929:SF0">
        <property type="entry name" value="TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15963">
        <property type="entry name" value="Myb_DNA-bind_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="2">
        <location>
            <begin position="134"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="25230" checksum="BED0065850F4BFCB" modified="2025-10-08" version="1">MNQDELNYTSIIDIINDRKGVYLNETEAKRIKTAKENKKDGKTQMPKFGKKEQPKQDDNANKDTESDADRNNKKEDNFLDDFSDDDIFKEKIDGPRMKIVEGQIVIDEESLYLKSTPKERSEYNVSQDKISNPRKRKKRVRWTENDTEKFFNSLRLLGTNFSAIARLFPERNRKDIKNKYKKEERAQPEKIDFILRNPLPICFFLSNKPHFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW5</accession>
    <name>A0ABV2AHW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000851</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000168">
        <property type="protein sequence ID" value="MES1918968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="367" mass="43652" checksum="3347B50BFECDE787" modified="2025-10-08" version="1">MSIKSENNPNKTEFLLSNDDDDDEIVDKKIWPKKDIFQKTNDSFHYPLWNPSNDPNNISCSDAFKVHLFCAIYSTLASQRERYNDSRLLPCSRTRSDLNLCLQVKTIRDFEKRRKTLETAYPWVCDRTQGFRHRHVWKFRKRPPTQFDDSRISEKEYAVMRESSITIVLGSLISRIYFHFVPHKIYEALDMSTKDFAEHVMKNRDKNKPKKYDFANRENVKINEAAQILTEPLLTEKEKSQNRSLSKSRILNEKSDLVAALTDIVENSGNVEYEKKRKKEYSESTKNLFGEEMSKSQLLKERENIENIVKMEKQEKPNLDKFKFLSDFWSNFGQKQKVKREKFEDEYKIDLRLDEGKIDDFENDKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ9</accession>
    <name>A0ABV2AHZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001146</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000248">
        <property type="protein sequence ID" value="MES1919290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="28267" checksum="DBFCC91534E95ED2" modified="2025-10-08" version="1">MATIKFIFYSLLSINIYRTNCVFSNEDSKFIVLDPSTNYKEITDENVNINDKDSIFVNCVTDMLTVNDVNIGYALIYCDGETLISQWNQVNVDRIDCLEISVEKTVCKFPDTDSNDKIKYPLLHSGFNYLPNEAVTSVYCDGYEYYLFKVSCVESKYVYTDQNDKEIQNVNNFCSSMNKNCDPSMLPKQLLPTTYTMTFNEHKINVKCFYTGKIYILECSDTNYQYENENLTQKIANSICNSFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI58</accession>
    <name>A0ABV2AI58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">25S rRNA (uridine-N(3))-methyltransferase BMT5-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000188">
        <property type="protein sequence ID" value="MES1919058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019446">
        <property type="entry name" value="BMT5-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10354">
        <property type="entry name" value="BMT5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="25S rRNA (uridine-N(3))-methyltransferase BMT5-like" evidence="2">
        <location>
            <begin position="521"/>
            <end position="696"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="276"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="279"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="709" mass="83348" checksum="70E06D9EF3B30D58" modified="2025-10-08" version="1">MKSYSFFSQGDRLSVWLTSIGKQYEKYKALFDSGAISADDLFEAEKRTATFEKHSFPKTQQKSISKAVDCINRLLKKNPLLWDAFETSEFLYTLGSKSWHAVWNLKEKGFTAARIIFFDNKDAYFFEEIVPEISNRNAIVSAIEWICNPQNWAHSSLSNWISSFGTDFLKIAEKIEDEKRTGKWLLTEKQDILNEYFEEEKLFLRVYLELFKLGCRPKWTLNKEILKSISTEIEKKKSTNLGEKEKYLKEKYSKRENLGKQENLVKQENLVKQENLNNKYDESLETKKNNNSKFSQKNDKKEKTNLKENELEKDVRKVVSAISNCESYEDLESILQKSQFTIKIKIKELSDLKKLRRTPQIPKTTEISNFPADKNIPNFSQFNTNFGQFDTNSLIYPQFASPQNQSQFVQYIQQPVLNQPLLQPPLLQQPILQPIIQTPLLNGTEYYQPIITQPTQNYNNLDENPNFRNNFYKKFGKNDVKKIDNKIIDNKIDKNEQKIEHLCLFDELVKLIKNNGNIVIFGENNLFFTSELLKALQFKVKNITLGGLRIIVLAKYSKTETLNKYENSAVNIEMIDCHCDNCEIIYDFGEEKMNWSRITKNIKFDHIIWNLPDFDDLDKNFKEKSIDEAFRNFNWFVYKFYQTINFRMLSSKGKVWLTLFEKESENCGLSKAKGQNGFYLVSAGKFNFELMEQYKFSSKFVKFNEKLQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH0</accession>
    <name>A0ABV2AIH0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RBR-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_001299</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-N(6)-ubiquitinyl-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.31"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.31" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000300">
        <property type="protein sequence ID" value="MES1919472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1750">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031127">
        <property type="entry name" value="E3_UB_ligase_RBR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002867">
        <property type="entry name" value="IBR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044066">
        <property type="entry name" value="TRIAD_supradom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11685">
        <property type="entry name" value="RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01485">
        <property type="entry name" value="IBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22191">
        <property type="entry name" value="IBR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13923">
        <property type="entry name" value="zf-C3HC4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00647">
        <property type="entry name" value="IBR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51873">
        <property type="entry name" value="TRIAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="11">
        <location>
            <begin position="100"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="104"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="406" mass="45760" checksum="8997A0336374FA21" modified="2025-10-08" version="1">MESDSFDDDDFEDVTGALRALDVTGNAESPFASMTLAELALFAREKTERFARKQNLSGDCAELVLKQIGFDESKYSPEMAELAAKIDAKLNSIDIDRRGKPRICKICCGDLSEAVSGVPCGHRFCGECWKQYLETAMQTSGINAAKVACPFYGCNSILLSSFLDTVLADETRARYERFCADFFVFHSEDAIDCVNPKCDLFVCRTGGDGRRHGRCKCGALFCFVCEAEDHRPATCAQKYESESSSASYLLVNTKLCPNCGSRIEKNKGCNHMACFNCRHEFCWVCQRDWTEHNAKTGGFYRCNVYRELKLKGELGRDKKRQKSAKYLFYYLRYQNHEQSLKFAQRNLSDLEAKISLLWKTDDESCWSDFDYLRDALLTVTKVFSGVVVSQAAKVHLHRGILHGGVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP3</accession>
    <name>A0ABV2AIP3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001361</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000323">
        <property type="protein sequence ID" value="MES1919551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="199"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="338"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="199"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="247"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="352"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="391" mass="45489" checksum="7F4E62BB36608B8F" modified="2025-10-08" version="1">MASNFDEPLSGLTEALYEESDVKGLDKRLLNLNREKLKNDLKEEKTKNQTFVTPKFRSLMTKQIYSILVPKTEAIFRRRKTVIEFDTSHDFFDRKYKEPIPKNVLGRKDDRAEEKAKTVTVVDSDNIIEKIKLSLQNFKSSNKKMANIAKKQNSKLSDSAKNNITKVKKFSKIDSSESEDIFENVGAYKFKPMADFDLEHDKSEKTKHKMDREKNKLRRYKTNKIPASQNKMLKEKPQKPRYKKRKNNDCAKESEHKTGKSPKRFLNSRTEALPASKLAKEVRKNLAPRNRKSIYSRIEAEIKDESGAAKEEIENVGFKGVFRDTVDPYDIYPNTDFNANLNAESDSEKMKNKLKKPNPKSKSFKSGKKVKQGIKKHEKQWEKIKQKLKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ2</accession>
    <name>A0ABV2AIQ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cysteine-rich PDZ-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000996</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000207">
        <property type="protein sequence ID" value="MES1919132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019351">
        <property type="entry name" value="DUF2039"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22876:SF5">
        <property type="entry name" value="CHROMOSOME 9 OPEN READING FRAME 85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22876">
        <property type="entry name" value="ZGC:101016"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10217">
        <property type="entry name" value="DUF2039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="126" mass="14626" checksum="E861A8A96556C9E2" modified="2025-10-08" version="1">MAKRKSIAKKRQQQKPFNSKDISAGHHKSKRKKLIASMPTFQLCTHCKQIIEWRKRTNKYKILKQSRKCASCGNKSIYRAYHILCDGCAYSSKCCAKCKIDLTHKKVQYDAIKFSIDGERKCVPQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW2</accession>
    <name>A0ABV2AIW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001233</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the small GTPase superfamily. Rab family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000276">
        <property type="protein sequence ID" value="MES1919394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050305">
        <property type="entry name" value="Small_GTPase_Rab"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47980">
        <property type="entry name" value="LD44762P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8797" checksum="5D8051A2828A0F6C" modified="2025-10-08" version="1">MEDKRKVSVEEGKKLAKEFNIPFFETSAKNDHNVNEAIQTIVMRIKDKFDNKGKENEKTKGIAMTTNDNKKNCCKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY0</accession>
    <name>A0ABV2AIY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001432</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000349">
        <property type="protein sequence ID" value="MES1919636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22641" checksum="4647CEE941693D8C" modified="2025-10-08" version="1" fragment="single">MSLLRKIQNRAFSTVASNRKHYVPVSFEIKNLASDFDRKILFNKLKSSNLPIKGIRYGLRKSEDGKKEIPVFLADCLYTKKPLPQIIPKIELNGENLIIDFSQITKKQIFEKSPDFEKLQKEINDEEKLFDIKAKVKRRALGAKRSKSGKALDELINEPALQFKIGLSAPIRVYRNRWLRNGYSEPCYWTIVRVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ23</accession>
    <name>A0ABV2AJ23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001458</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000360">
        <property type="protein sequence ID" value="MES1919667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="455" mass="53904" checksum="44E19AB47BCAB3C4" modified="2025-10-08" version="1">MFSDDIDAAKDCVLKSVDKINKTLYLNPIFAKLQNLFKITDLAIFYQFLDFCLTFLKNKKIFEQTEKTAKAKIQILSKKFDLNPRSSFKFTSKINKFCINLAIEKFKIHFYFLKNDLKSYQIFSKFLSILKFCYKNAKPNDEKFLIEKIFNSSQLEYLINLEEKFINLKMDKILKIKDKWISFKTLFIFNKEIKISIFSEAVIELLFSIKRRFYILSHFAANLTENMLKRLLRILKNEFEIEKNNKAQICGFLNCCDHFYQILDNWKFGQNTNFSKITLKKSFHFLKLKLSNFVLDCFKTFLTEILFFDEMVDKKEFLNFSNLNSVLHDFYFDLSSCNKKTFVTAFFSCLNDKTIELLALIKNKKIEQNSSDLFLTKLDILDCYKIAKEILNSNCILFKFDEETVTVLSLLCAGSDSLKFLEEVIEHKNFDEIYFVLEKNKLNNLALENVKTFLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI0</accession>
    <name>A0ABV2AJI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001417</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000343">
        <property type="protein sequence ID" value="MES1919619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051834">
        <property type="entry name" value="RING_finger_E3_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931:SF16">
        <property type="entry name" value="RING_U-BOX SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931">
        <property type="entry name" value="SI:CH211-59O9.10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="50"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="21424" checksum="3966D8939FB2B537" modified="2025-10-08" version="1">MLYAIYLKIREMLVERSMADHEETGSDVSVSSMLFELQEENFEALKNSRCIICLENYVMNTIICCLACEHLFHEKCILKWLRFNKTCPICNQHFRYGETLMKPSSKEINHFTKKYGDIVEKEGVKEKKEKSVQTAKTRELIKEDGEQEKIRYLPVGKKIDKNSIDIINELMVRKVILMAHRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJY0</accession>
    <name>A0ABV2AJY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001716</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000467">
        <property type="protein sequence ID" value="MES1919982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="75"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="200"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="25841" checksum="895D2B074B6A4D89" modified="2025-10-08" version="1">MIIQNRGKLKKNEQHGSSEEPFPHAINLKYKKVINDYSLIQISFVFALIGFQIITTNFFILSVSDIWVELKSIEMYSRLNYVVFLPSILIAFIAPKIMSKISIPKIFVCNVILQIICSIVIGSLPFYKDHISVTYLLFVFHALSFAGTCIAQIAIFSFAAKFSAKVVQFYCIGFSVGALVLGSFIWLFTNLELEPKFQSICYFGLSCAVHITTLIFFVKYFRRLSGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ0</accession>
    <name>A0ABV2AJZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005302</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000467">
        <property type="protein sequence ID" value="MES1919980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11621" checksum="1CFF4D562B10E0C3" modified="2025-10-08" version="1">MTKISNEQSVLINLIFYSETNLMSSDGEKSKLKPTLFRFEDNPITLFYSIKHKQRSILFSSFGNITTRKTNADYPYQILIKYSKITNKKINAFSSNKQVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF2</accession>
    <name>A0ABV2AKF2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">IBB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001869</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000535">
        <property type="protein sequence ID" value="MES1920163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.690">
        <property type="entry name" value="Importin-alpha, importin-beta-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002652">
        <property type="entry name" value="Importin-a_IBB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036975">
        <property type="entry name" value="Importin-a_IBB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01749">
        <property type="entry name" value="IBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51214">
        <property type="entry name" value="IBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="IBB" evidence="2">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11631" checksum="0604271CBE0C2B62" modified="2025-10-08" version="1">MLFDNSGEKITDYKKGLNAEESRRRRQDGLLELRHTQRRELMTKRRQLGAAARLDEQSVSVDDINRFKKGIMDNNPKTQYECTLCLRKIISKRFCHFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKI6</accession>
    <name>A0ABV2AKI6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001875</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000538">
        <property type="protein sequence ID" value="MES1920173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00098">
        <property type="entry name" value="zf-CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00343">
        <property type="entry name" value="ZnF_C2HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="Retrovirus zinc finger-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="3">
        <location>
            <begin position="5"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="20"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="26"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="89"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="99"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15882" checksum="7EEE58BBDB9578B6" modified="2025-10-08" version="1">MFSNRCYRCHRTGHIARNCDASRSAEHKRSRRRRSRSHSNRRSRRSRSRSHRRRRSRRSRSRSRSHQRRKHSTRRTSRSRSPSSRKRSRSESKNESKSRSNKRSLSKSPSKKRSKSPSREGEIGNAKNIGRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT1</accession>
    <name>A0ABV2AKT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001972</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000587">
        <property type="protein sequence ID" value="MES1920286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00201">
        <property type="entry name" value="WW"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.10">
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039726">
        <property type="entry name" value="Prp40-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036020">
        <property type="entry name" value="WW_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11864">
        <property type="entry name" value="PRE-MRNA-PROCESSING PROTEIN PRP40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11864:SF35">
        <property type="entry name" value="WW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00397">
        <property type="entry name" value="WW"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00456">
        <property type="entry name" value="WW"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51045">
        <property type="entry name" value="WW domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01159">
        <property type="entry name" value="WW_DOMAIN_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="36"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="122"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="243"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="298"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="355"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="10"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="387" mass="44332" checksum="8221E432398D1924" modified="2025-10-08" version="1">MSEQNKRMDSTNTSTEVTNNVDSNNTSAKLAGELAANEQPVWKKIYDSASAKYYYVNAITKDTTWNAPPDYIEREKVQENIEQKEEETPKSETFPNKEESEKKEEQKDEPDNPNTKLQKEDNIYNSNWRTAIDHDSGRTYHYNMQTGQTQWANPRDIAQHTPTSGDYAFQNQITGRRRRRSMKEMQDAWDRGDRVGLWECPDCSKILTEGSKKTHPDSCNARKARSVHMVQGTPADILAGAHWRAVQDRNGQTYYYHQITKQTSWYKPTEMSNFEQYQQNQSIIQTTLGSRNVGYNQWTEVTDSNGRTYYYNNITGATSWTKPSGSQDEKVARPDSVGDYSAAGFDGQQSNVGEWVEVIDSSTGGKYYYNSVTKATSWTNPVPFCFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT2</accession>
    <name>A0ABV2AKT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001634</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000432">
        <property type="protein sequence ID" value="MES1919882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="19129" checksum="39D627F90FEDE413" modified="2025-10-08" version="1">MKDDLLKWQKTFSEKILRVADKIVGRRNFVADDENDIENNIGNNGTKRYSATTISDENFKSTLNDNKEYRFESIDLNGYQYSGRFSRLKTKRGIVSTLEVLRAASARREICLKSYQNKKERLETMAKTLGQRRDAFLNSVWKRYFDENKGFTNFIDNSKKIDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX0</accession>
    <name>A0ABV2AKX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001988</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000599">
        <property type="protein sequence ID" value="MES1920305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13659" checksum="62F8F45EC8901602" modified="2025-10-08" version="1">MDKFQKLVPAYFSDKLKKYVVFEILDLMILNALKFSSNRSLEDYNKLISKIPKDLIDIFHCQKNRKIEFKCEKIKYFLNLGERDNEKELKLLFESKHKIFKNKIDILIQKLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX8</accession>
    <name>A0ABV2AKX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PROP1-like PPR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001840</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000521">
        <property type="protein sequence ID" value="MES1920124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033443">
        <property type="entry name" value="PROP1-like_PPR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF28">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17177">
        <property type="entry name" value="PPR_long"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="PROP1-like PPR" evidence="3">
        <location>
            <begin position="5"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="10"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="79"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12818" checksum="C01FB41F9BB587C3" modified="2025-10-08" version="1">MLLEKKLKPDEHTFNTLIATAANAQDFEKGFSFFEMMNDHKVISNMQTLTTVLKLCAQKGDLAKALNIFESAEKSLEPDTVMWNSLLNVCAKTGNCEQGFSLWEKMCQSRCFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL93</accession>
    <name>A0ABV2AL93_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Large ribosomal subunit protein mL54</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001872</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the mitochondrion-specific ribosomal protein mL54 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000536">
        <property type="protein sequence ID" value="MES1920168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013870">
        <property type="entry name" value="Ribosomal_mL54"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28595">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28595:SF1">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN ML54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08561">
        <property type="entry name" value="Ribosomal_L37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00033752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="16054" checksum="6F0711288D4D3801" modified="2025-10-08" version="1">MAFLARHAKSLLPITTSSKWRSFSKKIKAEAAEKIILESNKKEDNFTADCVDIFKEGDKPKLKEMNEYPDWLPDLKNPGKSLYELLCEDFDKMTLSDQKRLIKHGRKRRIKHGNQLRKQMKVKFKMRPYVLPNNEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB0</accession>
    <name>A0ABV2ALB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002128</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000684">
        <property type="protein sequence ID" value="MES1920463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="68"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13072" checksum="F640BC18C46EAF91" modified="2025-10-08" version="1">MRLTKSNQKLGSLNKPSISKSEKYKQLVGDVKKISEAIDNYRNHKTNYFAACKKWRMVDCTMRKISSFKAHEKKIYDCKFSHHNPDLVISVANDKKLKYWNVHDKKLLKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH0</accession>
    <name>A0ABV2ALH0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Regulation of protein K48-linked deubiquitination, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">OTUD4</name>
        <name evidence="5" type="ORF">MHBO_002187</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000718">
        <property type="protein sequence ID" value="MES1920523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22744">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003323">
        <property type="entry name" value="OTU_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050704">
        <property type="entry name" value="Peptidase_C85-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12419">
        <property type="entry name" value="OTU DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12419:SF11">
        <property type="entry name" value="OTU DOMAIN-CONTAINING PROTEIN DDB_G0284757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02338">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50802">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045689198" evidence="3">
        <location>
            <begin position="24"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="103"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="OTU" evidence="4">
        <location>
            <begin position="243"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="157"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="225"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="369" mass="42467" checksum="807EC20A1AAEF337" modified="2025-10-08" version="1" fragment="single">YKIKPQKMIFVLFVILALNNVISQPDSTCPMPIDGSLQITSINPTSISVNKTCGPLGFPKINGGANLVNPFQMDCLTTDLEYVLHSDRVTTFEDIICGIGNTFFYILITCIIWAIFVLSLIAFITIRHKQKTRATFNNATSTKLAVENENLITQSESESEEDGYEEEGYEEELLVESEPDNKSKSESESEEDLKKQEQHLESEPVNKSGSESEEEDKKDDKEEDNKEEDNKEEEIPTLEKVLKSVVTIPKDGNCLFRACSLLLFGTQERHPEIRKNAIIYMKDHEHYYKQFMSRNFDEYIKSRSQIGEWGDNYIISAISYYYKKSIHVYLKKQSLFINFEDTKTIVNPEFKKHISIMYSNGNHYDAIVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ0</accession>
    <name>A0ABV2ALJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002203</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000727">
        <property type="protein sequence ID" value="MES1920541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12901" checksum="5C37322ABDF0BD81" modified="2025-10-08" version="1">MDTRILTRIDIIQQINCSMNPFGKYLLKTKIIGYLNITANLALMTGVAAGFGYFATKITVHNTNRKSVIKAKSESEMEYTIKRNQFLAQKQKEIQREVYLRKKREERAKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK8</accession>
    <name>A0ABV2ALK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002227</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000741">
        <property type="protein sequence ID" value="MES1920568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="38"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="383" mass="44653" checksum="3A1D3C3B906BAC63" modified="2025-10-08" version="1">MASNYCLIAFDRYEKIAVQALKDNRNMKEIFKAKETEVELLFAKNKETETELEKIIKNGRNLRNNLQKEKRQIANELKEQKEIFEKFVEKMSEQKKHFENDIKGKKLIIKNEQEKLDKAKSEVEELKKKNADLLIKHGSLSKNLAKALNDSNSMIKDKDQLNNEVLKLKEKASETETVMNNLNEKLVENENMLSKANKINKDVLVEQEKMEKLIIEEKQKNENLVKMNLEKEKSIEENAKRRQSDLQNEKTKITKYVSQINNFKTKAETLQNNLNDAKNLIRQFNQMKIEKTEDNEKMRIFEQNFSKLKIVATKITEKVDSLETMLENTRKIGKGSPAPVLVISTYTTLFFAILIYNSESVPFLEHLVKAIKELFLSGFSVPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL2</accession>
    <name>A0ABV2ALL2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serine hydroxymethyltransferase, cytosolic</fullName>
            <ecNumber evidence="4">2.1.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SHM2</name>
        <name evidence="4" type="ORF">MHBO_002217</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000734">
        <property type="protein sequence ID" value="MES1920556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049943">
        <property type="entry name" value="Ser_HO-MeTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680:SF35">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Serine hydroxymethyltransferase-like" evidence="3">
        <location>
            <begin position="15"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15662" checksum="2B93DCDAD31472AD" modified="2025-10-08" version="1">MALRRFSVMQFKRLKIVDKTLFDLIRDEEKRQTETLNLIASENFASSAVLETLGSCLTNKYSEGYPGARYYGGNHFIDKIETVCQKRALETFNLDPKEWGVNVQSYSGSIANLAIFSAILEPHEKVMGLDLSCGGQFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ3</accession>
    <name>A0ABV2ALQ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Histone H2A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002013</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone H2A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000614">
        <property type="protein sequence ID" value="MES1920333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00074">
        <property type="entry name" value="HFD_H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002119">
        <property type="entry name" value="Histone_H2A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032454">
        <property type="entry name" value="Histone_H2A_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23430">
        <property type="entry name" value="HISTONE H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16211">
        <property type="entry name" value="Histone_H2A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00620">
        <property type="entry name" value="HISTONEH2A"/>
    </dbReference>
    <dbReference type="SMART" id="SM00414">
        <property type="entry name" value="H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0158">Chromosome</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="2">
        <location>
            <begin position="6"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="Histone H2A C-terminal" evidence="3">
        <location>
            <begin position="86"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="13303" checksum="4E250189EE54627A" modified="2025-10-08" version="1">MSKTIRKARKSKSSRSGLTFPVSKVNRYIRNGRYAPKVGVSSAIYLTGVVEYLAAEVLELAGNAARDNKKRRISPRHIQLAVQNDEELSKLMNDTTIPGAGVLPSIHSVLLPKSKSQKSQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM08</accession>
    <name>A0ABV2AM08_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002026</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000623">
        <property type="protein sequence ID" value="MES1920347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21452" checksum="E88DA2F27D35A269" modified="2025-10-08" version="1">MAGTEERILFCKNNKTFEISLRDDKVEIFQGKLFCGDKNHQSSKFGNAKQIFQNTKKTKIGQKFKILSVYSGKTLSILSLPSVIVSRLLFFLPFESAFNLTFFDFLSTEAALKVKRIDIENIPNDKAKNLFFVISQICFDLVVLKTDLEYKDENCAIAKMLLDRLNEFDVKNRLVVFADGQIVDLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM10</accession>
    <name>A0ABV2AM10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002347</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000815">
        <property type="protein sequence ID" value="MES1920704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="164"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="12"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="73"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="164"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="194"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="204"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="29780" checksum="1B7F18BB9D486C0E" modified="2025-10-08" version="1">MSSKQNRKISGKRSFSSTSESSSPLKKKTKREKTRYRKLPKISKNSKNRTLPNRKFGKTTKSRSKGNFNSEKTTTEKKRNFKKEIDKKKKIDKVIDEKSSDKTITEKMPLEKKSHKVDSSKSEKKLDGVKNISLKEKLFIKPAKKIKSIKMSFKSSFPLKNAISSINKSNFKNPKTIKNENKNSQQKNFDGENSKLSQINNKSPIEKSDKTESKSRRKSENSNNGGWSTTKRPLRNFLQVKKMISTFNEELAEKIVFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM31</accession>
    <name>A0ABV2AM31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002335</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATG22 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000808">
        <property type="protein sequence ID" value="MES1920690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024671">
        <property type="entry name" value="Atg22-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050495">
        <property type="entry name" value="ATG22/LtaA_families"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23519">
        <property type="entry name" value="AUTOPHAGY-RELATED PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23519:SF1">
        <property type="entry name" value="AUTOPHAGY-RELATED PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11700">
        <property type="entry name" value="ATG22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="92"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="145" mass="16221" checksum="9AAF0CCCF83C1AB1" modified="2025-10-08" version="1">MPKMDKTEERAYYVLVMSRGPFLMTTLAILFPIILDLAKFNRSKDGYVHLGVLSITPANFVFVVNSITSFIVIVLSPLIGSISDINNNRKKIVVAMSLAFMIVSFSSFFLLSKKLWLFCALIQITLISIFELTNVIYNAIMASIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM58</accession>
    <name>A0ABV2AM58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002197</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000724">
        <property type="protein sequence ID" value="MES1920534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="68"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16994" checksum="10E910763418D1D7" modified="2025-10-08" version="1">MGIYLSKPFYETSEEEESEFSFKKNLEIPDEELNNTKCSCNKNVNSDCNVRITQFTIERHIHDTDRCYVYEVKDRMTNQRFAMKCIITSNENKRKIASNEVKNLMSLQGNKHIVECMHVFHTTDYCLIVEELLEGYLVFLNMSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM61</accession>
    <name>A0ABV2AM61_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">G-patch domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002068</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000645">
        <property type="protein sequence ID" value="MES1920392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12374">
        <property type="entry name" value="RRM_UHM_SPF45_PUF60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000467">
        <property type="entry name" value="G_patch_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040052">
        <property type="entry name" value="RBM17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003954">
        <property type="entry name" value="RRM_euk-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13288:SF8">
        <property type="entry name" value="SPLICING FACTOR 45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13288">
        <property type="entry name" value="SPLICING FACTOR 45 SPF45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01585">
        <property type="entry name" value="G-patch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00443">
        <property type="entry name" value="G_patch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00361">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50174">
        <property type="entry name" value="G_PATCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G-patch" evidence="2">
        <location>
            <begin position="135"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="35"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="31664" checksum="772BB532D5B8F01C" modified="2025-10-08" version="1">MSDTKTVSALPPILKLQNVPRTTKKTKSVSFATGTKEKDAEGPNKYHITTKYRPFAVDSVNSESRFPTTQFGAVLGRPPFELYDPAAPNEYEDYCKAKKERLMLKRHANSLSRINEAEKSSAAEEKSAEGGDVFSNSFAEKMMKKMGWEEGKGLGKSQQGISSYLVPSGRFNRLSEADKRTSSCMCIVNMASRNQMDSFLKEETMMECAKFGKVVECVVYVNPDHFCSVEEEVTIYVQFQFDVDCERAVLAMDGRFFGGRKLRCYFFDLNRFLRRDFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB6</accession>
    <name>A0ABV2AMB6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002435</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000870">
        <property type="protein sequence ID" value="MES1920800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="88"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16433" checksum="D4569996FD241C37" modified="2025-10-08" version="1">MARQKEMTEELLEKTKEIDEKFSSLPLDQRRQLEKLENTIEEFAENAISDLETTEKQLRQSKEESNINQKKELSYPEARKVMVEELGIDEDKAEEFVEKLDTKKDGKIDLSELKEINKLTESRLERVETLDIEDDEKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMB7</accession>
    <name>A0ABV2AMB7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000887">
        <property type="protein sequence ID" value="MES1920818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="43"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="538"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="538" mass="63010" checksum="87EF5A5427079FAA" modified="2025-10-08" version="1" fragment="single">MFLLKNNGKSPINILFPIYRPKKHFWNKLLESTNKNKQSTKSDPNKIEENNNKTKIIKRENDEVGHSYEFTDKNFVKKIYGGKALKDSALKSEIIFNRRNEDFLEFKKSLLDPTIVRPENHLRLPENEDLPASIPSFKETKIVSPFRKKPIIFPPKPLQEAHENFLFKSVSSKSPKDGQVLSVQDRFNLMIDKTFEKVSKAKSGDDLVEILRNDWLNPNSVLSDRCESMRRTLEVFLQLGQIKQFAFINSKKLDSLLEEIVEDIKNKIPYLTSTQLADIFWSFAKMGARPASIINKLVAKVESKLSQFSMGQISDIFYSFEELRIKSPKLYKNVERSVIESHPRTLKELTPTQLIQLSYGAIIGTKIQNQRRDMCWHLCREIGKMWKPKPFVPLSSMLQLCRFTTAINILFQDDRFKGLIPNDLREKALFLFKSGRAEMYSPPFLDPMARDVVKAHITTMMRKQNPLTMGINGWWLWSLDRRNPPFSVEPASKSWYTRLDDKRRMLGSYMFRNHIIERHGLYSLHIPFYEWEKLVCFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ8</accession>
    <name>A0ABV2AMJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein arginine N-methyltransferase 1</fullName>
            <ecNumber evidence="3">2.1.1.319</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PRMT1</name>
        <name evidence="3" type="ORF">MHBO_002490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.319" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000921">
        <property type="protein sequence ID" value="MES1920870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035242">
        <property type="term" value="F:protein-arginine omega-N asymmetric methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025799">
        <property type="entry name" value="Arg_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006:SF53">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06325">
        <property type="entry name" value="PrmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51678">
        <property type="entry name" value="SAM_MT_PRMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19743" checksum="E4154A7B1D4E79E0" modified="2025-10-08" version="1">MDKGPKIFGLPSSMNHKIRKTQTKRKTDPVYENGYFDSYSHFGIHEEMLKDSVRTESYQKALIQNKDTIKDKIVLDIGCGTGILSLFAARAGAKHVYAIEMADIAKFAKRIVKENNYDDKITIIQGKVEEVALPVQKVDIIISEWMGYFLLFESMLDSVLFARDKWLVFKQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV4</accession>
    <name>A0ABV2AMV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002607</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001011">
        <property type="protein sequence ID" value="MES1921002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="10188" checksum="FAD35C6C24C85495" modified="2025-10-08" version="1">MIAKPRMPFNEKFSLSITDKKETMLVIISYCLYNNRGNPPNILHGWDQPEFVEKFTNIIYDSEFRFYRCDQNTLAFLEIKNFLDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMZ3</accession>
    <name>A0ABV2AMZ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002639</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001045">
        <property type="protein sequence ID" value="MES1921041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="116" mass="13352" checksum="4B1E832DCE8B1987" modified="2025-10-08" version="1">MVQNSKYSKLDLSDSSDMSNEVEKEENIELMGEDKILDSMTDCVKRLSDMSENIGVEINEQKGLFEKTTENLSVFNERFTKIYKKIDSLLITKKGRYFIIFGLLLILGVLLSLIFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN42</accession>
    <name>A0ABV2AN42_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C-factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001072">
        <property type="protein sequence ID" value="MES1921088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05325">
        <property type="entry name" value="carb_red_sniffer_like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052184">
        <property type="entry name" value="SDR_enzymes"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45458:SF1">
        <property type="entry name" value="SHORT CHAIN DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45458">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="234" mass="25735" checksum="59F8CD2D0C3B0EE8" modified="2025-10-08" version="1">MTLTYFVAGASRGIGLEFVQQLLTSKNKVIAGCRKPESLRDLKSKYPENLHTLTLDVNSDSSIDAAYENLKSKATKDLKIDVFVQNAAVADFGDKVFDVKRETARHVLETNSISPLMVSRKFLDMFAQPSSKLVFITSRMGSISDNSSSSAVFYRMSKSALNMLTKCLSIDLKEKGVIVLALHPGWVQTEMGMMGGQAPLTAEQSVKGMINVISSVGPEKTGRFLNWKGAEIEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANA5</accession>
    <name>A0ABV2ANA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">DNA-directed RNA polymerase I subunit rpa2</fullName>
            <ecNumber evidence="9">2.7.7.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">RPA2</name>
        <name evidence="9" type="ORF">MHBO_002733</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the replication factor A protein 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010001117">
        <property type="protein sequence ID" value="MES1921161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04478">
        <property type="entry name" value="RPA2_DBD_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040260">
        <property type="entry name" value="RFA2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014646">
        <property type="entry name" value="Rfa2/RPA32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014892">
        <property type="entry name" value="RPA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13989">
        <property type="entry name" value="REPLICATION PROTEIN A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13989:SF16">
        <property type="entry name" value="REPLICATION PROTEIN A2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08784">
        <property type="entry name" value="RPA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036949">
        <property type="entry name" value="RPA32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0804">Transcription</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="OB" evidence="7">
        <location>
            <begin position="80"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="Replication protein A C-terminal" evidence="8">
        <location>
            <begin position="186"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="184"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="31479" checksum="D539E634991CC186" modified="2025-10-08" version="1">MSRFDDLNPSQFGGFGENAEKSRIDSFLGNSPLTSPESKSINRTALQQSVIPVSIKQLLDAQEPTGNSTFKIDNKEISNVKIVGQIEKINVQTTHNEYLVEDGTGRMNIKIWKEMSEEQVPKDDGISVGMYVIVFGRVQFFNGTRKITSQKLVPVTDYNILSYHILETVYVHKYNTTHQKNIPNDANTTPNQNGNNQNIANNDVSTNSLFEENEQLTFEQKEILNFYKKDQSESGPHISEAFKAFPQFTQNSIKENVNFMVMEGLLYGTIDDDHLKPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG8</accession>
    <name>A0ABV2ANG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002540</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000965">
        <property type="protein sequence ID" value="MES1920933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000711">
        <property type="entry name" value="ATPase_OSCP/dsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00213">
        <property type="entry name" value="OSCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="3" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="4" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="318" mass="37042" checksum="E41E2120717E0565" modified="2025-10-08" version="1">MLKKQFSKRLIAKNIAKSRFASKKGFEIPPKYDKNFLPFSMDEIEFFEQINKNDISFEKLPDPIAPKIFSADKAAICAAGLFSLSSRFGEDKLMSVRKNFSDFQKFLNYVPPKHIFDQKILKLGSVHEAAYNSDSFSPNGPTHNAFLYFRYLERQEGRISIEPYSYRKDFLIMDKLGENTTEKDLLKIATTNPKEVDEDRFLLNPLLFGSIKELIKKKYLKRFDDFYQYFVRMVNAHFGIPEILVETAKSPTEKEKEILTKFTMNKVDPAVKDQVSIEFKVNENFLGGFKVIINNDLYDYSYTKLFSNTMKLLKDNKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP3</accession>
    <name>A0ABV2ANP3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002711</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001101">
        <property type="protein sequence ID" value="MES1921129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11467" checksum="95FFB7C30211276E" modified="2025-10-08" version="1">MIHKDIIISKIIDDIMVRCPFKLCKWKGNLSQMRKHSKDCLMDPNKAPKWLFTEGLATQKDGLSENKEIEVAQPLSLRARLYQSEEQRDKLFAMMDDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP11</accession>
    <name>A0ABV2AP11_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Serine hydroxymethyltransferase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002804</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001190">
        <property type="protein sequence ID" value="MES1921249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049943">
        <property type="entry name" value="Ser_HO-MeTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680:SF35">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine hydroxymethyltransferase-like" evidence="3">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9316" checksum="BDB7D83F10A98983" modified="2025-10-08" version="1">METLCQNRALKAFGLDSNEWGVNVQAFSGSIANLAVFSALLENGDHFLALDINCGGQFIFHMIKFLQFFRTFVLCSRIYYKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP73</accession>
    <name>A0ABV2AP73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002769</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001153">
        <property type="protein sequence ID" value="MES1921203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15291" checksum="C22D19C9302E5E3F" modified="2025-10-08" version="1">MKVIEFLKVFFNVVSGLLTTIFIAISTLLTWTKNEEITVYLSKTCIHSKICLRNKFSSCGGISYILINIFILILLASSIIGLLNKFCPKLEKLFFVITVSLNGISVGILVAVLCVFLLYMDCYIPKYSKFKIVFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC2</accession>
    <name>A0ABV2APC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001227">
        <property type="protein sequence ID" value="MES1921296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045862">
        <property type="entry name" value="Trf4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092:SF15">
        <property type="entry name" value="INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092">
        <property type="entry name" value="POLY(A) RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81631">
        <property type="entry name" value="PAP/OAS1 substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9146" checksum="6320042360E1CEB9" modified="2025-10-08" version="1">MDVDKFDESRPYLLSIENPLDTSLDIGKNSFAIMRVRKAFEYAYNQLLMANDEEKKLSLLSRIVGIRDPKLLNRKIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM3</accession>
    <name>A0ABV2APM3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pre-rRNA-processing protein esf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ESF1</name>
        <name evidence="5" type="ORF">MHBO_003145</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001557">
        <property type="protein sequence ID" value="MES1921618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039754">
        <property type="entry name" value="Esf1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012580">
        <property type="entry name" value="NUC153"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12202">
        <property type="entry name" value="ESF1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12202:SF0">
        <property type="entry name" value="ESF1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08159">
        <property type="entry name" value="NUC153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NUC153" evidence="4">
        <location>
            <begin position="230"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="155"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="265"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="157"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="173"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="198"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="265"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="283"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="295" mass="34850" checksum="D8AE2A7911F616E3" modified="2025-10-08" version="1" fragment="single">ENQNFEDIKERDKAFKIPNDYKAPTFFQSALSHSNTKFTWDMNDPKRDYLLRANSNNDPKIEDYAEFLGSSEENDFLDETINGELKNNKTKNEDFLNDDTKSREKLLSLIKNLKNKKETEEVVVKFQTGFDDKSENENRNDFESAEEKTNQLLENKKKLKKRKRVNAIRKREKKIENEKIKESKGFNLIKEKKKAKNSKTDSKNRPSKNEKSIENSSKSIKNNFEIDLKDKRFEALKKDSNFSIDPSNPQFKKTDQMKNLIRKMNTENETEKRKVEDVSMKSLMKKLKSKLHKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT3</accession>
    <name>A0ABV2APT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transcription initiation factor TFIID subunit 7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">TAF7</name>
        <name evidence="7" type="ORF">MHBO_002995</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TAF7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001373">
        <property type="protein sequence ID" value="MES1921461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037817">
        <property type="entry name" value="TAF7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006751">
        <property type="entry name" value="TAFII55_prot_cons_reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12228:SF0">
        <property type="entry name" value="TATA-BOX BINDING PROTEIN ASSOCIATED FACTOR 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12228">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04658">
        <property type="entry name" value="TAFII55_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01370">
        <property type="entry name" value="TAFII55_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TAFII55 protein conserved region" evidence="6">
        <location>
            <begin position="2"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="20610" checksum="E36B677BDFFAD1F8" modified="2025-10-08" version="1" fragment="single">MAEQQIILRLPENLAKNAQKEFAKTENPINKKETEKPFILKSEGNKNRIFRVKLWGKFYPAVLYDLPCHIDSQKRGKGDVFYKSGDISQILKVYPSDWDGKDLESVDNRLQNNDFGKNGGKKRISFKLADGISPPTQSIRHSYNFPKVCNCDIPIKHSAETAPALCSDCGVFYVFMLFFAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ61</accession>
    <name>A0ABV2AQ61_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003358</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001815">
        <property type="protein sequence ID" value="MES1921822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="78"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13766" checksum="1AF3AA324781E100" modified="2025-10-08" version="1">MLRSRKLVKKSLLRLRRYCQKTKVSGDSPIFPKIDKSSVNPNRKYVYGALIFLSLYLFLNHVKNKNRKSHSANATKIIKSAEANTKLLDDKIEKARAEYAKLQRVVQAMKNDLSENKNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ73</accession>
    <name>A0ABV2AQ73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003361</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001819">
        <property type="protein sequence ID" value="MES1921825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007062">
        <property type="entry name" value="PPI-2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04979">
        <property type="entry name" value="IPP-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="21"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="100"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18099" checksum="787111A15D2586B0" modified="2025-10-08" version="1">MSLNIKGILKNSKSGTEENINKSTNLQQKSPNLSIEQSLDIALENSKHNKDLSIKKRTKNSQNEKTKKISKQLNWDEKNLRKNEAERVPRMKITEPLTPFRTNSFDSSGDSNSVFSTDDEESDFESKRKKHYSKEFVPSDFDSFNKKLSANKSLKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ90</accession>
    <name>A0ABV2AQ90_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PI3K/PI4K catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003366</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001824">
        <property type="protein sequence ID" value="MES1921830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1070.11">
        <property type="entry name" value="Phosphatidylinositol 3-/4-kinase, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015433">
        <property type="entry name" value="PI3/4_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000403">
        <property type="entry name" value="PI3/4_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036940">
        <property type="entry name" value="PI3/4_kinase_cat_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10048:SF22">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 4-KINASE BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10048">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00454">
        <property type="entry name" value="PI3_PI4_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00146">
        <property type="entry name" value="PI3Kc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50290">
        <property type="entry name" value="PI3_4_KINASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PI3K/PI4K catalytic" evidence="3">
        <location>
            <begin position="1"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="24235" checksum="C770DBABDF7B45DD" modified="2025-10-08" version="1">MKYLLFLRTEALLKPFLTPFLSIKLKNKISKKSLKMARKMFLESMAAYSLITYFLRVKDRHNGNILINENGSVAHIDFGYFLSNSPGGNVNFESVPFKLSSEHVKVMCGNENLDSFEYFKLLVIKGFLEARKYWDFIAMILNLVKSTGTSMPCFRDFNAVEKMVERFCIKKSDQECIEYVYWLIEESLDNWRTTQYDSYQRITNGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC2</accession>
    <name>A0ABV2AQC2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">G-patch domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003394</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001864">
        <property type="protein sequence ID" value="MES1921859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="19"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="120"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="172"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="295"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="146"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="190"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="214"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="308"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="362" mass="41177" checksum="4410FB63B831C678" modified="2025-10-08" version="1" fragment="single">IVFYDGGKLSQCRSTPSILLKQPANKTPNIFDQKNPPENSAENENPTRKNIVEDDYKDDGFGEFERHTKGVGLRILEKHGFKDRLGAGEDGRLNPVLPHNVNSRCLGDFFKAKNALLLSSPEQSAVSTEIEDSSSDFNRKDKENDSDNENSDFGEDDDFFFKVDYCNNDIKRSPDINDIESPDENGSFGKTEKDTKKDEKIDFGEDDSEANWDFAKDIDGDQNKSYAEEGFRSRKSERERREALRTKWLRRGEREMAESEKLKISQTVENCLDRAFQSDGDVLRCAQVVGMSEEKGGGEVAQNGEWGDPERALRSEESEEEFARADRDSDPFGLLDAEDDMEFEEPDSDPLKDAYRGRKFFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF6</accession>
    <name>A0ABV2AQF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001913">
        <property type="protein sequence ID" value="MES1921900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="185"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="225" mass="25681" checksum="3F814587E44CD980" modified="2025-10-08" version="1">MFSNRYFQNSFAKFLQKVKTPPSIKINVGFIALEIITTYTTVVSVADIWINIFSKNIYTMFNYVRSIPVVALYLFVPLILKYVSVNKIFYTNAVAQFVSCVMFMFIPAMKVKLGRDAALAITILFLLISAVGSTVCSTATFAFAAEFSNQTVQFYITGLSVSNLFYGVYFLPFPNIVKNLQIRMICYFILPLVVHIASIIIFYFSSKKVPKKEERVEILNFRKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX2</accession>
    <name>A0ABV2ARX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell differentiation protein RCD1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RQCD1</name>
        <name evidence="2" type="ORF">MHBO_003932</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CNOT9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002765">
        <property type="protein sequence ID" value="MES1922420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007216">
        <property type="entry name" value="CNOT9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12262">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04078">
        <property type="entry name" value="Rcd1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23509" checksum="6CBCA76DBF787699" modified="2025-10-08" version="1">MEISTRCCNSLAIMQCIAMHPETRTVFIESNVPLYIFPFINIRHHKSVNLEKIRLTGLGVFGSLLQSNDPEVVKYLIQTEIVPLCLKILREATEISQTVAAYIIQKILIDRQGLEYVCATSDRFFSVSDVLIETVEKMINKNSIRLLKHIIHCYLCLSANRKARNALRKCLPSALRTNAFEHLLSRDSDAQKWLNQLIHNLSLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS79</accession>
    <name>A0ABV2AS79_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003008">
        <property type="protein sequence ID" value="MES1922517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="10175" checksum="32E1ACECE446E34D" modified="2025-10-08" version="1">MVSISHLQRAFDREYNERWTYEYFIVSFRGMKQGLSYYTLKDVEGERVDGIFYQPELSEVNITDETKFRVENVLIRRKDQVLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA2</accession>
    <name>A0ABV2ASA2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein MEMO1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004059</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MEMO1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003064">
        <property type="protein sequence ID" value="MES1922545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07361">
        <property type="entry name" value="MEMO_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.830.10">
        <property type="entry name" value="LigB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002737">
        <property type="entry name" value="MEMO1_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR04336">
        <property type="entry name" value="AmmeMemoSam_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11060">
        <property type="entry name" value="PROTEIN MEMO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11060:SF0">
        <property type="entry name" value="PROTEIN MEMO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01875">
        <property type="entry name" value="Memo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="156" mass="18044" checksum="3E1AE70C9A520669" modified="2025-10-08" version="1">MQLRKSLFAGSWYENDKTKLSRLLKKHFDRAEAEQSKFCGNVKAIISPHAGYDYSGEIAACAYQAINPQKIKTVFVLGPSHQIYTNKCLLTTFDRFYTPFGDIEIDKNIVKDLLQQPGFSKHEPYDDEKEHSIDLCCPMLKYRMAEFFFTQIAKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB4</accession>
    <name>A0ABV2ASB4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004079</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003102">
        <property type="protein sequence ID" value="MES1922565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15223" checksum="999B8C715D6566DA" modified="2025-10-08" version="1">MTNDENNGTKKIFETCKVCEEIFCLTELPSFSMNEKEKLKIFESILINLEFSVFFERATKFLHSLDYENDLKEGINRIFNLLELAAKFGQKFKINGVEKYFVKLKPFFEEGNLKEKFSSLVKETSPILNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP8</accession>
    <name>A0ABV2ASP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004217</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003452">
        <property type="protein sequence ID" value="MES1922693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9130" checksum="A5FC3A065C565307" modified="2025-10-08" version="1" fragment="single">VDHSHIPGVSLILKKCLHIEHLNDGKEVFFEGGDSGSGVFVLVEDIDPTKTRLYPLGILFGLSTNDTALACPLENVLSTLNVSIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ1</accession>
    <name>A0ABV2ASQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004204</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003411">
        <property type="protein sequence ID" value="MES1922682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13370">
        <property type="entry name" value="RNA METHYLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13370:SF3">
        <property type="entry name" value="TRNA (GUANINE(10)-N2)-METHYLTRANSFERASE HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03602">
        <property type="entry name" value="Cons_hypoth95"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00507">
        <property type="entry name" value="N12N6MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15442" checksum="873060AE894DC7B2" modified="2025-10-08" version="1">MSLKTRKYIGPTSTDTKLAFFMMNQGLVTKGKFVYDPFVGTGSILLAAASRGAFVFGSDIDVTTLKQKPKLGGKTIFENFLQYEFEKPEVFLSDFSKQFLRMEQIFDAIICDPPYGIRAGAKKIVFDKEIKVQKFNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ5</accession>
    <name>A0ABV2ASZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004296</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003657">
        <property type="protein sequence ID" value="MES1922772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.31.10">
        <property type="entry name" value="Transcriptional Coactivator Pc4, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009044">
        <property type="entry name" value="ssDNA-bd_transcriptional_reg"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="21181" checksum="D65F02B82F2218B6" modified="2025-10-08" version="1">MLRKFAQNLNKTKTTFSRRFYETSPSQHLNRNFFISDETQVLQIKQNMPAFVKGFDGKLFPRKKGSLIFNFKMKESNESFFFPLTVENTATLVLDKDEYVFKWQSHKDENLAKKLTIKKSDTFLTATLEKKVSESSEYQLESKINFSKTDFLRLKILIEDAIPRMYGWRIDEPPVIVPMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH6</accession>
    <name>A0ABV2ATH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004510</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004225">
        <property type="protein sequence ID" value="MES1922978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045606">
        <property type="entry name" value="ATXR3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46655">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46655:SF1">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19633">
        <property type="entry name" value="SDG2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SET" evidence="4">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="5">
        <location>
            <begin position="80"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16462" checksum="53DA0661375D1F05" modified="2025-10-08" version="1">MMLERHEKDKNGYALVVVDAKYKGNLISRVSHSCSPNAKVVVVASDGVYKIGLYALRDINGGEEITFDYFCRTDNKNEMEEAVCLCGTENCRGSFLIFSEDFSDLILKKKHNLYDRIIILLKCSLVKKISQNDLQKLKMGRFRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV5</accession>
    <name>A0ABV2ATV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PHD finger-like domain-containing protein 5A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004638</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PHF5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004654">
        <property type="protein sequence ID" value="MES1923098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005345">
        <property type="entry name" value="PHF5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13120">
        <property type="entry name" value="PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03660">
        <property type="entry name" value="PHF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016468">
        <property type="entry name" value="PHF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="110" mass="12492" checksum="3F8229C95F3CBC5A" modified="2025-10-08" version="1">MARHHPDLIMCRKQPGIAVGRLCTRCDGKCVICDSYVRPHSLVRICDECNYGSFQGRCVICGSEGISDAYYCTECVQLQKDRDGCPKIVNLGTAKTDLFYERKKYGFKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY0</accession>
    <name>A0ABV2ATY0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004364</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003850">
        <property type="protein sequence ID" value="MES1922837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="26"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="159"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="29520" checksum="CF04DC8CEB1A7886" modified="2025-10-08" version="1" fragment="single">MSVLVAATVFSSCTDEFDDSKLVKTQEDQQKEIEELQKKVDENESSLAELIKQFGILQTLVDTNSKDGKAAIESLRSELLERLATRVKELKDDIATKGDLSTLQILVEQYTTLNTKVDKNESDNKDALASLKDELIKILGDRITALENDTISADNANEIAELKLLLVKLQAQVDNILETIKNIQSDIDAINADLDGKASVEALEALTTRIEALEAQITTKAEISALEAVKQELIKTLGDRITALENDPTSVDNANEIARLNGLLEKLNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU63</accession>
    <name>A0ABV2AU63_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ycf1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004746</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005078">
        <property type="protein sequence ID" value="MES1923203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="222" mass="26655" checksum="E5BE0AFA546A2313" modified="2025-10-08" version="1" fragment="single">KTASNIKNEKSNFPPGINVTIDNNKKQILENEKIDNNKIADNENDDKNTKKWVTIKNKNGENKKREIDRTKEKILRLCIKLKQNVRKLIKRDPKKFKNGIETSLFFALFENRRRDWRLREISSKYFLRRLEEMDDDFERIRKKFDKNEIDFKRILKDGKCLFEPLFENEKNGNVVRWLDKSCFVVDVTDLSKRKKSKLVKMFENAEKKNVIAENDLGEFFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU75</accession>
    <name>A0ABV2AU75_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005070">
        <property type="protein sequence ID" value="MES1923202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14263" checksum="93A8C2526EC8A352" modified="2025-10-08" version="1">MFGDKCTFVCDEDYETSDGAQNGEAVCEESINGFFEFKEDIGCYLIEKKSGILAIVLSIFGSVFVVSLAVVLFLYYREKICSYDYNELPIDRPNAIKKYAINKKLNNDSIFSTRESSNGDEVFEII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA9</accession>
    <name>A0ABV2AUA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004792</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005290">
        <property type="protein sequence ID" value="MES1923247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="88"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16113" checksum="342A42A4FC41C798" modified="2025-10-08" version="1">MSSAATHMQRLDAVQRRALRLVVTDEDQQPAPVTSLEHRRDVSALVVCHKTQVQRVSHLDPLKLLPRTVQRCTRTAASSDESVEVPRSHSSQHQRTYTARTSRVWNMFTAATPHVQDMSTHQVKLAAHKWRSTQPSPLVLHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG1</accession>
    <name>A0ABV2AUG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Antiviral helicase ski2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SKI2_1</name>
        <name evidence="6" type="ORF">MHBO_004846</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005484">
        <property type="protein sequence ID" value="MES1923296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050699">
        <property type="entry name" value="RNA-DNA_Helicase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131">
        <property type="entry name" value="ATP-DEPENDENT RNA AND DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131:SF1">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="5">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17935" checksum="E204FFD57663B5DE" modified="2025-10-08" version="1" fragment="single">GSEIIRDIEWIIFDEVHYINDYERGVVWEEVIIMLPEHVNIILLSATVPNAMQFANWVGMTKRKNIFVISTLKRPVPLKHFLYTNGKLFLAIKNGVFQNNVFSKAKLSMKKNNKAMERSWQMNFIQRVKSKWQDLIKLLLKKLIARFCNLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ9</accession>
    <name>A0ABV2AUJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005752">
        <property type="protein sequence ID" value="MES1923346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="217" mass="24906" checksum="D511A6074A3FCF6D" modified="2025-10-08" version="1" fragment="single">LDLYLFPYLKAYVDTGAKHCDKLIFFGKIVKSSLGNKFLKVLMYVDPATLINDNKEIKLMLGGSGYIYSTKLNFPGEALVFGDIDHKKSNVEEFLKLERSFKISETDFVRMCEENNFKIVKVSYKDEKLPDEAFEEYREKTEDKESVEDEMGSPVSIGEPLEKVGLWNRSFSTATRFGAKSCFGRRTESLGSGYFRRNGNVKFRASQLVRCSKLLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP0</accession>
    <name>A0ABV2AUP0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004933</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005854">
        <property type="protein sequence ID" value="MES1923368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="125" mass="14893" checksum="FCEEC7C718A01C9D" modified="2025-10-08" version="1">MAGLCYRKITIIQTPIFAIQSVYACRLTFWIYLWNPQNFRNSWRRPPWCGQKRVSHVQSRDVPLRIMYLQELDSTGHTFSNFTKPRIRCTVYPCPGLRCTTRFFKLHPLKGHVKEKRPGMSYCIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS5</accession>
    <name>A0ABV2AUS5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004963</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005997">
        <property type="protein sequence ID" value="MES1923397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="5614" checksum="4060C005031B3FA0" modified="2025-10-08" version="1">MPSRIHQRPFQTVRSVISGASRSSGAVGAVCWGEPETRFVARDTGTIVLSTPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV05</accession>
    <name>A0ABV2AV05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005064</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006426">
        <property type="protein sequence ID" value="MES1923487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="15258" checksum="7389839A4E8EE7C2" modified="2025-10-08" version="1" fragment="single">MTLVKKELGAISFGTDIIKLASGKVTKSSGLEIDFAGFATPRVGDVIMLNPVKRVAGDEGLVNRSLFVISVTGTKAKVMSEVPSGMDIDATDSIFSKVSSLSGTQPNLKYGIDVTSTSREGNVVSLKGSHSKLIGVQGALGGLKIDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV58</accession>
    <name>A0ABV2AV58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">USP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005146</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006869">
        <property type="protein sequence ID" value="MES1923554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="1">
        <location>
            <begin position="35"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9409" checksum="5813CC497C14A1B2" modified="2025-10-08" version="1">MNSKAEITEKALKMENVFTTQSESALINNDKLTVPGFSNIGNTCYANSILQSLLNTSKLRQFLLRKWVFRKFLKVVNIIAKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB5</accession>
    <name>A0ABV2AVB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005214</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007184">
        <property type="protein sequence ID" value="MES1923610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="121"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18716" checksum="FDD3FFEBF4905692" modified="2025-10-08" version="1" fragment="single">KSDTKIEKRSKSDKTSKQKKIDKKIKSSKKIDKNKNSSNSDKEDKIEVKRKEKPDIESRKPILEATLYKLKRQEAELKILLSDKRTSVVTEKSVKSLNKDFDNFMSQMAPQTMFKTENRNRTEFKPKKTDFPKKRKVRKTERKQNFNLKESSAKGAFNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB6</accession>
    <name>A0ABV2AVB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005144</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006864">
        <property type="protein sequence ID" value="MES1923552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16686" checksum="D8DD2ACF6D7B4860" modified="2025-10-08" version="1" fragment="single">KQRLAEILEEANSQIAEHESSFEVASKLIARLMKDSDRERSQGVMHMSDALMEFYETRNKIDTGDSMCVKSGYQKLDKVLGGGFVNGGFYILAARPAENGSKVFYIPLEMSVFDMMAKIISTKSGVPASELMMKKFEDHEIDDVYDRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD0</accession>
    <name>A0ABV2AVD0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005161</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006927">
        <property type="protein sequence ID" value="MES1923567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="62" mass="7195" checksum="2DD86D1882B1417C" modified="2025-10-08" version="1">MNSWKGIEKGFRLWVDIASFLCVTFLRMVTKPRTVMPKSLVNEVLRLCHDLPVIGQEGYLRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD1</accession>
    <name>A0ABV2AVD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004962</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005976">
        <property type="protein sequence ID" value="MES1923396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046435937" evidence="1">
        <location>
            <begin position="30"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6809" checksum="400A13B3B128CC8D" modified="2025-10-08" version="1">MISDLTTCQALPVPTLVHSLALLSLLAQASKPRYRNWKQHTKTLTCQDRCRPSTMDRKPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVV2</accession>
    <name>A0ABV2AVV2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006414">
        <property type="protein sequence ID" value="MES1923482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="146" mass="16742" checksum="6F7CCD11D6010528" modified="2025-10-08" version="1" fragment="single">LAAAHWNFWEVNTEILCLCIKFLVCKLVSSKHFVLRRKKCGSLLAAHLVDLALSRKRVQWILVCSESGYPERFWNTLGFEEIPRRDRARFSVVSEAELNPFRDTVLMRLTRREYDSEGVCNVEEEAFEGGEESGYEGGRKVVVGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEM0</accession>
    <name>A0ABV2AEM0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Ion transport domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_000166</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005821">
        <property type="entry name" value="Ion_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028325">
        <property type="entry name" value="VG_K_chnl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11537:SF254">
        <property type="entry name" value="POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN SHAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11537">
        <property type="entry name" value="VOLTAGE-GATED POTASSIUM CHANNEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00520">
        <property type="entry name" value="Ion_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00169">
        <property type="entry name" value="KCHANNEL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81324">
        <property type="entry name" value="Voltage-gated potassium channels"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0630">Potassium</keyword>
    <keyword evidence="5" id="KW-0631">Potassium channel</keyword>
    <keyword evidence="3" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="94"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="129"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="166"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="207"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="231"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="Ion transport" evidence="13">
        <location>
            <begin position="12"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="359"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1918156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="379" mass="44112" checksum="14B829760EB73D3B" modified="2025-10-08" version="1">MYQDSVLSVLIDITIFAINIASIIIAILADVSDSLKYESIYVLPNVISILDLIFFSIYVVVFAAKIATCNSQTLQELKMERQFVNKLPFPFKKIIAFLMMPLQLLELFILLVFGMLFWPFSFVIRNFKVFFYISFYMRCLKMVTYFRGGRIFLKILYRGRRRLLELVFMFVILALMLGCSAFLAEMYTNTQKTPIPEFAFENLTDGIWWAIVTITTTGYGDYALFTPVGRFIGSITMLIGILYITMPISIISSVFESYVVEEEKRREKWRAAILERVDSYAGKSTIGPKKSVDHNPRTLENILRGDSEDQLGVNRTDNIDSDENLPFRFNRQILLQIEKLIERQQEMLKESMQLKTFIQKQQNKKKRKSRMDILSRVSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFA5</accession>
    <name>A0ABV2AFA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000347</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000050">
        <property type="protein sequence ID" value="MES1918375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="237"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="308"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="426"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="43"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="102"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="237"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="257"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="273"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="438"/>
            <end position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="454" mass="52282" checksum="F0322C9041E3546B" modified="2025-10-08" version="1">MEKFSNNKKSDNLNKKRDDKKPNNLNKKMEKFSNNKMSYNLNKKTDDKKFGIADKSKVKSGMVDDIELKDSGKEKKHKKKRRKKHADLNKDDLQESGSAKNEKKKKRRKKPKENCTKCSCIVRDGEILYSDKKPFCKACVDNFGIVVDEEKPKKKTKSLCVACEEKPESKMVYCEKCDGERSKKISEADDLKMEIDDLKKRTEDYKSELEENKKKLAIEVGKAKTLNEKNLEELRKIRSDKDNRDKEAKRVSAKNSELVKRLTKTEKEKSQLETEIQTIKQNSESAGGNAKENEKIKSRLKAIEKELENAKTATENETKKNRALGKELEAANAKSEKSDKALKEANQKLQDALKETAECNKALELVMKDFDKNSSEAKRAKELVLKDLKEIQNKLAEEQKRRFEELEKKEIKINELTTENKRLESELEAARLSDDSSSESYYSEYSGSSDDDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ7</accession>
    <name>A0ABV2AFQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000447</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6983" checksum="C07D24FBA857482D" modified="2025-10-08" version="1">MKKVADAKQRHRDLITLHNNSIFRLRQVIKEKNDILKRFAEFYPDINSGPTVQEGVKFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT3</accession>
    <name>A0ABV2AFT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000486</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000076">
        <property type="protein sequence ID" value="MES1918526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027267">
        <property type="entry name" value="AH/BAR_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103657">
        <property type="entry name" value="BAR/IMD domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="26064" checksum="5A2157859327A330" modified="2025-10-08" version="1">MVIEECIDSRDSSFNRQNAIEMVNLFSNKKIDSTEQTDLDEKYEKLILFEQYAKAIKKRYIKMTKNLNKVNQLNNEINESVLKFSVLSEFSTVYVTNTKNKMSAINQYYADFNNSVESTKMSFFQNIFYPFLDDIAQIKRKRKILLKKRKNYLKYKKKLEKKNANENTDKENLKYKKLENKFRTVSMFYHSTLDLLNQLIESVFMKMDEKDFGSIKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT5</accession>
    <name>A0ABV2AFT5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-directed RNA polymerase II subunit rpb4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">POLR2D</name>
        <name evidence="5" type="ORF">MHBO_000477</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the eukaryotic RPB4 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006590">
        <property type="entry name" value="RNA_pol_Rpb4/RPC9_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045222">
        <property type="entry name" value="Rpb4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005574">
        <property type="entry name" value="Rpb4/RPC9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038324">
        <property type="entry name" value="Rpb4/RPC9_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21297">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03874">
        <property type="entry name" value="RNA_pol_Rpb4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00657">
        <property type="entry name" value="RPOL4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="HRDC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="RNA polymerase Rpb4/RPC9 core" evidence="4">
        <location>
            <begin position="16"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16010" checksum="8ECF33FCB3E8CC92" modified="2025-10-08" version="1">MDDKNNKDPLKQPYVDKPENYRPLWNSEVYYMLDQYLNSNSELIDLPRNNIVQKTFDYVSKLHNFKSSDALKEASVISQNKHVIEGDFDPLEIALINNLCVGSTDEAITLIPSLEAKFAENEKPVQDLLRDLAKYQDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX1</accession>
    <name>A0ABV2AFX1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phlebovirus glycoprotein G2 fusion domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000518</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000085">
        <property type="protein sequence ID" value="MES1918566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="179" mass="20942" checksum="7F847AF685D5ED8C" modified="2025-10-08" version="1">MPILFVPSNTLTVSNRQNAPKWLKRSLHINKNSKIEAFLDLFRCAKRMCEPLKLKEEATTECLCYRKADRSVIKNGKVCEEWAVRPEKILENETECNMEPITVTMYTQFDYERYLMLISETLLPFVDSGIKVARNAVIYFFCSIAAYFIFSFSKKAVIEKLIQLNAIRCNWIFVRPSFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG37</accession>
    <name>A0ABV2AG37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000332</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000047">
        <property type="protein sequence ID" value="MES1918353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12018" checksum="54B735851D9B0FC3" modified="2025-10-08" version="1">MKAITEKQLDDETIQTIKGCFQAVLEDLFNGEPPVVISAIESFMKTASAHNSEIIIKVTLSHKNTSRRIEFGEITKIKERVVSNITQNNELKLRAKIEDVEINFDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGH4</accession>
    <name>A0ABV2AGH4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">CDC7</name>
        <name evidence="8" type="ORF">MHBO_000508</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000083">
        <property type="protein sequence ID" value="MES1918554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167:SF23">
        <property type="entry name" value="CDC7 KINASE, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167">
        <property type="entry name" value="OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="32842" checksum="D8184132A3D8EAB0" modified="2025-10-08" version="1">MNENYLKKYMKNLLIAIRRIHLEDIIHRDIKPPNFLHKFGTDNFLLIDFGLSQKLDELKKLSCKRKNFRKIKNFDKAAKISKTDSVSSKSGISSLKTAFSSSFRSGQNEKKIENPTSVPFHILKRRLFEKKREKLDQLPQVSRCGTRGFRPPEVLLRTTKQTKAIDMWAVGVIMLSIVTRQYPVFYSPDDLTAMAEQICIFGNSYLDVAKKIYEDRKIEMNFETSEYCLTDLCRKLFKKNSSENERFWSEKTLDLLEKLLELDFSKRITAEEALNHDFFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS3</accession>
    <name>A0ABV2AGS3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000766</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000145">
        <property type="protein sequence ID" value="MES1918871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14132">
        <property type="entry name" value="STKc_CK2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045216">
        <property type="entry name" value="CK2_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24054">
        <property type="entry name" value="CASEIN KINASE II SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24054:SF0">
        <property type="entry name" value="CASEIN KINASE II SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="11"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="305" mass="36025" checksum="306EF3A9CE5D2055" modified="2025-10-08" version="1">MTIEWSPLDDYQIIQKIGRGRYSDVFQGINVKNNKFCAIKILKPVRKSKINREIKVLQNVSGGPNIVKLLDVCKDFSSETPSLIFEYLQNTDYHFLFKNFGDMEIRNYLFQLLKALDHTHKNGIVHRDVKPVNVIYEARTSEMRLVDWGLADFYFPGKEFNVRVSTRFFKAPELLMQYRHYHYSLDMWSLGCMMAGMKEPFFKGIDDDDQFSKIMRKFSQTELSQYIRRYDITPSKQIEQVLTRSTPTDWSRYVNKNNSRLVSTEALNLLKKMLVLDHSDRLFAHEAIEHPYFDPVRNHVARILD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU0</accession>
    <name>A0ABV2AGU0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">INO80 complex subunit B-like conserved region domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000607</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000104">
        <property type="protein sequence ID" value="MES1918674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="91"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="159" mass="18895" checksum="A0CB16EBA2F72A90" modified="2025-10-08" version="1">MANGEYLFEQHCYCKNIVFKKPKTVLATRKSNRSFKRQVVEDLSDEDQLFEEKSSGYYSKHGLYQGDDMDDEERERKRKLIRKRKREQLKMEAISNLLENSQLQIKRREREKKLAEKRSKEALITKDKMVGKTVRYVNKTVLVNGIKTISRSLSYPINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH24</accession>
    <name>A0ABV2AH24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Target of rapamycin complex 1 subunit kog1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">KOG1</name>
        <name evidence="1" type="ORF">MHBO_000865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000171">
        <property type="protein sequence ID" value="MES1918981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004083">
        <property type="entry name" value="Raptor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12848">
        <property type="entry name" value="REGULATORY-ASSOCIATED PROTEIN OF MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12848:SF16">
        <property type="entry name" value="REGULATORY-ASSOCIATED PROTEIN OF MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="338" mass="39299" checksum="6C14E4881D266939" modified="2025-10-08" version="1">MPKECKMFDFYKWSLLNTPRKHKIGVEPTENEEKSIYAIPQIFSEENLKTKTDSVCAQFFAKDKHKNLFGSFSKYKYWEKDALLMQNSVFDSNIDLAKEEANELSRTDVLRKFFEDSAEVEEFYSKNPNKFRKIGYRTSLFSVAKKEFKKMSFNPFEAYLVAVDEDNFINVWDYRKNSVNSFKNGNTKTFPTDFDFVNFYPKMIIAASNDGTARVWKDYHRSGYQSLVSAFWAMDGIAPSKDSSMLCERRPFSNQIIFAGSNGKLCLWDLDTEKKVKSINLRHRVYTTTLFPDRDSESIVYLGTNRGDVEVLDLRIGPPFFSATLVLCFRRSSSRTVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH44</accession>
    <name>A0ABV2AH44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA damage-binding protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000721</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000132">
        <property type="protein sequence ID" value="MES1918819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018846">
        <property type="entry name" value="Beta-prop_RSE1/DDB1/CPSF1_1st"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058543">
        <property type="entry name" value="Beta-prop_RSE1/DDB1/CPSF1_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050358">
        <property type="entry name" value="RSE1/DDB1/CFT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10644">
        <property type="entry name" value="DNA REPAIR/RNA PROCESSING CPSF FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10433">
        <property type="entry name" value="Beta-prop_RSE1_1st"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23726">
        <property type="entry name" value="Beta-prop_RSE1_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 first beta-propeller" evidence="1">
        <location>
            <begin position="17"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="RSE1/DDB1/CPSF1 second beta-propeller" evidence="2">
        <location>
            <begin position="417"/>
            <end position="578"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="778" mass="88756" checksum="A3D31DE1A07E1B07" modified="2025-10-08" version="1">MAEDCLYVKKLTTSTIVTHSAICNFTSVSDKNLVLAKNNCLQIHKIENGDGKLSNLFDVPINGNIIFLATYRPLSTSKHYIFFVTEKYQYVSISFNAQSSKISTHFVNNINDFWGDPIGAKIQGDVESSKSLAALNFYKSKIKIIDIFPEERNNRAFDSLMDNNVIASIQFLHNRKTTLIAVLYNPTNFSKHKNDSYIKIYKVDIDNFELKFEGKEIKVPSTSSLLKSLCKPIEGILVISNSKISFLNNEGQFMANISFSPANILATCPLYENNSVLLSDDIGAIINVTFIKNNKRKIAKLNAKKIGFANIAHCLSKIGPRTFFIGSICDDSQIVRINDNLNIGKTVETLKTFSNVGPIKDIELIRKAKIENDHQKILFCTGHKTFGQIGILEKSLEMTKVSELNIRKCIDIFVFGPFVLLTFYEKTRIFKFSENSLQEIETPKWLNFDRTIKFEKIDDNLIQITENSINLIEFSPNLANLDSENLARVLITHKTQHKTTQSAIKHDKILILNDKNQILLLNLNRKNMTFSQIAFFSETEKQVSSFSIAYDLSIKTFFVVIGYFDSTQNCVQIQNFAHSKLVKIPINLKLVFPNFVVSADSHFDGGKLIIAFGLNDGNCVFGYMDYKFDFNILCKIKLGQFPVKISATKYLQRRVLLASSEETICFDVEKKDYFYISNSENLDKGYSHSYKNLINTKNYLFLKNDKLLIGEINFDDEPNKYSVFKRKFNDFAPMKISFCQKTKKICVAGTTAKRSKNEPILLLFNLVFCSRLKTKFKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF6</accession>
    <name>A0ABV2AHF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000962</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000197">
        <property type="protein sequence ID" value="MES1919095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="98"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="119"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="25050" checksum="563E6955F56AA19A" modified="2025-10-08" version="1">MDLRIKKIIANRIKINKSNNYKKELAYRERMLKNNVCYINYDILPIYVDIRPYLKAKNIDHSKLSDKTMEIQIEKVTFRLKDENDKVLHAKEKIIQNEQRNSESASKAVETSNEKSGLKTESTSTNRNVKSKQKRPKSIEEQNGKKSDENCECKDDIICKTCQKIAEAEKWELHRIKVIAEAAKKSKEEKQKKKMRLKEIKRKKLLKRRKVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR1</accession>
    <name>A0ABV2AHR1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">isopentenyl-diphosphate Delta-isomerase</fullName>
            <ecNumber evidence="3">5.3.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">IDI1</name>
        <name evidence="7" type="ORF">MHBO_001061</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from isopentenyl diphosphate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the IPP isomerase type 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.2" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000223">
        <property type="protein sequence ID" value="MES1919198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004452">
        <property type="term" value="F:isopentenyl-diphosphate delta-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02885">
        <property type="entry name" value="NUDIX_IPP_Isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.79.10">
        <property type="entry name" value="Nucleoside Triphosphate Pyrophosphohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011876">
        <property type="entry name" value="IsopentenylPP_isomerase_typ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02150">
        <property type="entry name" value="IPP_isom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10885">
        <property type="entry name" value="ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10885:SF0">
        <property type="entry name" value="ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018427">
        <property type="entry name" value="Isopntndiph_ism"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="Nudix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="6">
        <location>
            <begin position="35"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="25532" checksum="2CE53A212F8ACE41" modified="2025-10-08" version="1">MDSDLCILVDRQDRTVDFAAKRFCHKSENIKKGVALHRAFSVFLFDSQNRLLLQRRADQKITFPALWTNSCCSHPLASENEDGGETFSEKLEGVKRAACRKMKQELGLQSCVSTKELVFVTRIIYSSVEQEWGEHEVDYVLFMKKELSMEPNSSEVGEVKFVTASELQKELNKDSGRHFTPWFKFISKKFLLKMWERLDTILAAGDSSDRKIHQMNALERI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS7</accession>
    <name>A0ABV2AHS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nuclear localization sequence binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">NSR1</name>
        <name evidence="6" type="ORF">MHBO_001108</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000238">
        <property type="protein sequence ID" value="MES1919248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003954">
        <property type="entry name" value="RRM_euk-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23236">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23236:SF119">
        <property type="entry name" value="NUCLEAR RNA-BINDING PROTEIN SART-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00361">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="289"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="387"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="464"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="47"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="62"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="116"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="147"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="164"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="214"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="259"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="467"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="482"/>
            <end position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="513" mass="57346" checksum="BFF06E4379E20AE9" modified="2025-10-08" version="1">MVKPKKDKTVKKKTEKKLPKKKITKNTTKKQTQPKKAIKKNNAKTSKKIEQTKKKIIEKSSSDVSSSNSSDDSSSSSQQESKKQSKNQIDLKLDSDDSNSDDSSSTSDDSSDSPKNNKKVKTNPKKTKTENKQSTKTNKKSEKTKRKIGDAKKVEKKKMKDDSSDSDDSSSDSEESPQNDKIAKGAKNSNDQEEKSSSESSSNSEESSSEESETEKKSIETKVEPKKNTKESKKSSSSESSENSESSESENSESSQISEKAKKEKSVKKEETGKKENLNGESEEMVNKKRLFIKNLSFETDEQGLKDFFKDCGEIEEVNILTRNGKSRGIAFVVFKTEESSAKAVKLDGEELNDRSLKIEYSKGKPRTNNSRDANTPFKRKQPEDCKTVFVGNLSYDAQEDQLNDFFSKCGEISSIRIVTDRETGNSRGFGYVEFSETESAKKAIELNGKQIMSRSVKIDFAAPRRSGNDGRRSFNGDRRGFRGGRRGGFNKRGRGFGRKEGITKFEGKKTVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX2</accession>
    <name>A0ABV2AHX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">DEAD-box ATP-dependent RNA helicase 43</fullName>
            <ecNumber evidence="8">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">RH43</name>
        <name evidence="8" type="ORF">MHBO_001117</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000241">
        <property type="protein sequence ID" value="MES1919258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="7">
        <location>
            <begin position="111"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="142"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="111"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="398" mass="44922" checksum="BC3CDB8DD349F67C" modified="2025-10-08" version="1">MAEDANKNVSESKNLVDINAELLQKNPELASRNLVDKLAQEEASLLKGVNNERMPIMSAREVAQGVKYKTEMKTTWRLPKIYQKMTLKKQTKIRKKGKIEIHGNEILPPIEDFNGMRFPKAIRRVLKRKGIQKPTPIQIQGLPTILSGRDMIGIAFTGSGKTLVFALPMIMQALELELRLPLKRGEGPFAMMICPSRELCLQTLNVIKEFTRELGKSGFPELRSLLCMGGTDMRRQEKNFARGFHLMCATPGRLFDMLNKNKFNLDICTFVCLDEADRLIDLGFDEEIRNIFSFFKRQRQTVMFSATMPPKIQTFATSALVNPVIVNVGRAGAANLDVIQEVEYVKNESKILYLLECLKKTAPPVLIFCSKQSDVDDVHEYLLLKGVDVVAIHGGKCC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC0</accession>
    <name>A0ABV2AIC0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001208</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000266">
        <property type="protein sequence ID" value="MES1919362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="327" mass="35873" checksum="C93A8A0824E5F480" modified="2025-10-08" version="1">MTTTKNFENASDIQKQLQNLKVSLTARSPATTPAEELSSGERTALILRDLPKDVNRAEILALFPDKPSPQNSADEATVCKTDVLSVFNEFGQNWTLRFASEKNCVAAAMALRAKTLRGEVLHSRVAGRTLGARKESAAEPQNSPFPSYLNRYGNQSPMFYSSSFSPILSPATEESFLNKIEVPPGVFGEQRGTASPVSPSSNSIPVSPMTRILGNSPSTLEIAMGPDFNVQSPPSEQIESQYRKILKMKQSSLDSVSADCFPPNMVKSLSKRKVRRFLGALSKQRFEAPRGFFDEDGTPRYFKRGEMDPVVCYGGELPVINPNAVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF0</accession>
    <name>A0ABV2AIF0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Holin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001012</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000210">
        <property type="protein sequence ID" value="MES1919148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="87" mass="9159" checksum="5B8BFB2F612B0BBC" modified="2025-10-08" version="1">MEYAGIGVIALIVGLGEMFKKIGFPPKYLPLVDLGLGLVAGTLLIQPNDIKSGIVQGLYIGLSASGLFSGAKHIAMSKEKYNATHNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIM5</accession>
    <name>A0ABV2AIM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000968</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000199">
        <property type="protein sequence ID" value="MES1919102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18587" checksum="F80190444B49457D" modified="2025-10-08" version="1">MAEFKSSLFNFRHFDEFSRFRISARITKEKNFQDFRFGESSQNRIESCVYLEGRISKSKSEAEKEQIRFYRDAEKCSREESHHPALWDYHIRETSTDKCVACEYFWPSTLKNNFVINKIDEETPILSFNGNSEMFAIKGKDKTMLFDILEGSIDFLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ6</accession>
    <name>A0ABV2AIQ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001372</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000327">
        <property type="protein sequence ID" value="MES1919563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051309">
        <property type="entry name" value="ABCF_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42855">
        <property type="entry name" value="ABC TRANSPORTER ATP-BINDING SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42855:SF1">
        <property type="entry name" value="ABC TRANSPORTER DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="71" mass="8384" checksum="A45D8CA88172D496" modified="2025-10-08" version="1">MPAQRHQNEESVRRLKIHLKGQRHKVAFCGVLLSRPDILFLDEPTNHLDIWAIEWLERYLRKYTGTVSASN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT1</accession>
    <name>A0ABV2AIT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DEAD-box RNA helicase Q domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001383</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000330">
        <property type="protein sequence ID" value="MES1919575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="7">
        <location>
            <begin position="274"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="59"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="274"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="39031" checksum="A1B14CDB28BC2C74" modified="2025-10-08" version="1" fragment="single">MSDSSKTTKNDRKPANSENDKKEIDDKSKFQKTKMLHKDRLEKIEKWRKTQKQKLEKIRAKAKEREERKKAKIQRELLRKKQIAERKEREKKIKEQARKERLAHEQKRRKIEIELKMKEELMLEKKKSKISDKSEEEDILEKFMKSIDEKNKNRKRKAKTQLSENLKKVVDKIRPNRKNILKIEKSEILGNETRYEPEDLVIKEEVSWLDKMRQKKKEIKPVNHSAMDYNKFRKNFYLEAPEITAMTDKQIDEYRKDNLEGVKIRGRRCPRPIFKWSQCGLPEKVYDVLKKYDYQEPFPIQCQALPCIMSGRDIIACAKCVFGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW3</accession>
    <name>A0ABV2AIW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DNA replication initiation factor cdc45</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CDC45</name>
        <name evidence="6" type="ORF">MHBO_001424</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CDC45 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000345">
        <property type="protein sequence ID" value="MES1919626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003874">
        <property type="entry name" value="CDC45"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10507">
        <property type="entry name" value="CDC45-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10507:SF0">
        <property type="entry name" value="CELL DIVISION CONTROL PROTEIN 45 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02724">
        <property type="entry name" value="CDC45"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="6" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="30125" checksum="F011F963B3E7102E" modified="2025-10-08" version="1">MQHVRFSVIPVTGYQNLKDQFDHIFSDNSLKNALFLNNGGSVDLASFLLSPEETDVENDVKFYVFDSHRPFDLANVSDENERVSIFCDNDDIETNYPPDLDAEELNEDELKQLEKRLKRYYNGTFCGQSSALCAFKITRKLSKNNNNLIWAAIVGVTDQLVHEKIRAGQYFDAVRELNIEVLQLNVPGMLGNNATNSKTRSKLVSGHVEFSRELKMSLYRHWSIFESLFNSVFIAAKFAIWRDNGRRKLFDFIAKLSIPLAVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ49</accession>
    <name>A0ABV2AJ49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA polymerase epsilon catalytic subunit</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">POL2</name>
        <name evidence="3" type="ORF">MHBO_001496</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">DNA polymerase II participates in chromosomal DNA replication.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA polymerase type-B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000377">
        <property type="protein sequence ID" value="MES1919713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.342.10">
        <property type="entry name" value="DNA Polymerase, chain B, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006133">
        <property type="entry name" value="DNA-dir_DNA_pol_B_exonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029703">
        <property type="entry name" value="POL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10670">
        <property type="entry name" value="DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10670:SF0">
        <property type="entry name" value="DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03104">
        <property type="entry name" value="DNA_pol_B_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DNA-directed DNA polymerase family B exonuclease" evidence="2">
        <location>
            <begin position="151"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="372" mass="43623" checksum="1460E3505C1882F3" modified="2025-10-08" version="1" fragment="single">MAISPLKKSAHKIGWLFNAEISSLLEKETETELSAIKMYFVDQNSETFTAAMAYKPYFFVRTSTEKDDIESEFIKRFPGFISKIEVVHKEDLDMNNHLSGKKAKFLKMSFPNQRILTIVRDKILNNIKNRKEKYIAHSSENRKNIFGAIEEIREHDINFLQRFLMDNKIRIGNWYNLVSDRDGTVSVKILNDKLDRPNMNICAFDIETTKAPLRFPDSEIDEIMMISLMINTQGYLIVNRKVVLEDIEDFEYTPKPNLKGPFKIFNEKNEISLLQRFFELLKQSKPQIYVTYNGDFFDWPFIEKRCLVHDFNLFAEIGVFRSKKTFRGKFCLHLDAFCWVHRDSYLPIGSQGLKAVVREKMGYEPDELDPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ58</accession>
    <name>A0ABV2AJ58_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Adenylate kinase isoenzyme 6 homolog</fullName>
            <shortName evidence="7">AK6</shortName>
            <ecNumber evidence="7">2.7.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Dual activity adenylate kinase/ATPase</fullName>
            <shortName evidence="7">AK/ATPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001340</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. Involved in the late cytoplasmic maturation steps of the 40S ribosomal particles, specifically 18S rRNA maturation. While NMP activity is not required for ribosome maturation, ATPase activity is. Associates transiently with small ribosomal subunit protein uS11. ATP hydrolysis breaks the interaction with uS11. May temporarily remove uS11 from the ribosome to enable a conformational change of the ribosomal RNA that is needed for the final maturation step of the small ribosomal subunit. Its NMP activity may have a role in nuclear energy homeostasis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>AMP + ATP = 2 ADP</text>
            <dbReference type="Rhea" id="RHEA:12973"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Interacts with small ribosomal subunit protein uS11. Not a structural component of 43S pre-ribosomes, but transiently interacts with them by binding to uS11.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the adenylate kinase family. AK6 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.3" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000315">
        <property type="protein sequence ID" value="MES1919524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00039">
        <property type="entry name" value="Adenylate_kinase_AK6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020618">
        <property type="entry name" value="Adenyl_kinase_AK6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12595:SF0">
        <property type="entry name" value="ADENYLATE KINASE ISOENZYME 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12595">
        <property type="entry name" value="POS9-ACTIVATING FACTOR FAP7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13238">
        <property type="entry name" value="AAA_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="2 7" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="NMPbind" evidence="7">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="region of interest" description="LID" evidence="7">
        <location>
            <begin position="106"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="18813" checksum="2E10B363947C9DF8" modified="2025-10-08" version="1">MKLVIAGTPGTGKTTLSKLISAKLKCQLISISEIIKKQKFYGEYDDKMNSTIYDYDKVSKFVQKLSSPNIVFDFHSVDIFDPLKEKIDFVFVLRTDNEILYKRLEKRGYKQDKISENIEAEIMQVVLDEATNIFGANKIIELSSNDENEIDVNLSIVLKKINFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI6</accession>
    <name>A0ABV2AJI6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001561</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000403">
        <property type="protein sequence ID" value="MES1919797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6292" checksum="1B0F948D31BAE1ED" modified="2025-10-08" version="1">MLYKYGEQKSLMLTSTSFWGSLISKDGCVKETFLFTNFTKKYITQPNEKISTASV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJP3</accession>
    <name>A0ABV2AJP3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Rho guanyl-nucleotide exchange factor activity, variant 2</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RhoGEF4</name>
        <name evidence="2" type="ORF">MHBO_001649</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000438">
        <property type="protein sequence ID" value="MES1919900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.900.10">
        <property type="entry name" value="Dbl homology (DH) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035899">
        <property type="entry name" value="DBL_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000219">
        <property type="entry name" value="DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051092">
        <property type="entry name" value="FYVE_RhoGEF_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673">
        <property type="entry name" value="FACIOGENITAL DYSPLASIA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673:SF159">
        <property type="entry name" value="LD03170P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00621">
        <property type="entry name" value="RhoGEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00325">
        <property type="entry name" value="RhoGEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48065">
        <property type="entry name" value="DBL homology domain (DH-domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50010">
        <property type="entry name" value="DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DH" evidence="1">
        <location>
            <begin position="44"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="482" mass="56681" checksum="F6CBD998B973895F" modified="2025-10-08" version="1">MSANIISLKSELMNEIKGTTHFRFSRTGSLPKNEKYHTLKSAIVLPETFRELIRTEENYIKSLENLNNLRIVLKKTGLRQQRLFKENTNENRKIIFRNIKSILKLSNKFLSELKDIVIDKHFFVNLSLIFSKFAPYMKEYAIYGMGQLEASEMLNKIDKKDKTFIEFCDCWLKNIEEATFDGLLILPIQRIPRYFLLLQKMSKYVYSKRDIKLIEKAMNSIQIIISHIDKSILFKERERISIKIQNMFPKESLLSASRRYVKMDIVVLKTELKKKKFIGRNVLLVQFNDLLMVGLKKQKKYKKIWDCDTNKLMVSKSSKSDLDINIWSDHLSFIVKFPFVAKRDEWIDSLKKQPNLNKNAIKIHSIMLKCVVCGVKTKHFPCCFCNFAHCKVCSKNPKMCLECTKVPENAQGEIANLLKQFNLGKYFLAMKEIGLKSRKDFYKMALDQNFSNSQIITKLRVFYGMENEDVDRMLKMCNFLKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ1</accession>
    <name>A0ABV2AJZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">E3 ubiquitin-protein ligase HTD1</fullName>
            <ecNumber evidence="1">2.3.2.26</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">HECTD1</name>
        <name evidence="1" type="ORF">MHBO_001733</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000473">
        <property type="protein sequence ID" value="MES1920001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.260">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47457:SF1">
        <property type="entry name" value="BTB DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47457">
        <property type="entry name" value="OS05G0345500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="590" mass="68214" checksum="C3015E19ED31EF7F" modified="2025-10-08" version="1">MIKIISCTPFKYQRSTTKTNNPFDGFFTRKDEQPHVIFMLQFHAFRAKQVVFGPFASTSRMADDNDEDDFFVELSGSDDGVNWSVIARKLCRLEKEVDVGDIKANFVNIDESAQDFYRYFRLTKQSLISIQKESLKIQIFEMYGDIIFDDNTKIRLLQYKSDFDENGAIFYLGSNEKKNPWTNPSLSKIVKVTSTGSSKCDINRFTGRVPSRCVTTPKEKSWISVDFGNNVSILPSHYTLRHYDAFDTEALRNWVLQGSNDNRMWKVLLVHEEDASLNKAGQTHTWAIPFQQEFFSKFRIFQTGKNSNKHFYLAASGFEIYGAMKILGDFFENINVTAVEKIERRDFGKDGILFYLGSHGNSTEWINPVERGYIEVSQSSLAQDSLSFKNICGREIIRCVTLNEESAWFALSFTNCRIKPSKYSLRHYSTYHTEALRNWCLQGSEDGQTWITLRKHVEDKKLFRPGDTNTWKCHSTRFYPKFRLILTGKNSTNNYILACSGIEFYGSIQFNSSNPFQKSIGIKSENKISDPKKRTGIYKNNHSEDTKIAQINRNGFKQNQNWDFDRHSNLVQIDNEFAAINVGVDDLWEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK09</accession>
    <name>A0ABV2AK09_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ankyrin repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001703</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000462">
        <property type="protein sequence ID" value="MES1919962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24171">
        <property type="entry name" value="ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24171:SF8">
        <property type="entry name" value="BRCA1-ASSOCIATED RING DOMAIN PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00023">
        <property type="entry name" value="Ank"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="67"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="122"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="212" mass="23554" checksum="68B81DFD2BB80538" modified="2025-10-08" version="1">MSRSKMLKNLHALGENERLKNDNTEQNEKLLIAVKNRSLEDVATAIKNGANVNCFEQFEKEKMANVFRNSPLHICAENGEFEISKLLIDNCADIEQRNLFLFCKTPLANFNKHPLKFDKISVGSTPLHVAAACNKKEIVELLIKTEANLEAVNKIGNTALHCAAFSEASEVCRILLFASYKKASAFEVSLNSCGLTAYDLALSEEVICKTKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK26</accession>
    <name>A0ABV2AK26_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ultraviolet-B receptor uvr8</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">UVR8</name>
        <name evidence="2" type="ORF">MHBO_001760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000484">
        <property type="protein sequence ID" value="MES1920031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052830">
        <property type="entry name" value="RCC1_domain-containing"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46849">
        <property type="entry name" value="RCC1 DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46849:SF1">
        <property type="entry name" value="RCC1 DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00415">
        <property type="entry name" value="RCC1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00626">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0675">Receptor</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="RCC1" evidence="1">
        <location>
            <begin position="163"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="1">
        <location>
            <begin position="215"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="300" mass="33892" checksum="93A2F66DA8280AD1" modified="2025-10-08" version="1">MMVNGYQKETVSDMRINHLTKNQKTKLTKYNFKVLEKSEQFYTFQTKLISINRNENSSDINVFTLHFDENENPKIQQNAVFETTEKVLFVDSRQNLVFVVSTNDTPKATSVVKIFEITVDPKPSDLKRRLSDQKTILEFQRRLIKAPTAIASGLNHSLFLVDGIVFSWGTGLFGSLGHGNLDDIEAPRKIRRLNGLFANKISCGQNHSIVVTVNGAVYAFGSNANGQLGIEESEVNIADFPQLVNFLEDFNVENVFSGNRHSIAVSKDGTIFGWGWNFFGQVYFNCFRASIIKLAIFDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK38</accession>
    <name>A0ABV2AK38_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001768</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000488">
        <property type="protein sequence ID" value="MES1920042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="363" mass="41565" checksum="816ED57964978E26" modified="2025-10-08" version="1">MYQNDFIDPQTFWSKELNWLINPHHLSADSPTDENLGRTMKNYETFLFVTLVGDSETYCDVKLENNNVNMKFNENDGLKKSHKFLFEILKKCPFMETATGEFPNLNVVHLRQGEAIYAHENYSKDQKSNLFKNLVQFVRQIFTALLLLKKRGVRILKHIDREMLVVDRHQQLKLKGFACDLIDEGDYKFFNKILAGLIYHIDPQARDPLLIDLMKSIVNNSSDENPLTEELLAHPYFRQNNHNRLPTLVSVFEGDCLFVCLSGTTVLRLGNVKANPEGVDLFDKQLKVVDNNTFKRDTSHLSVINTEVVGSKCVVIVFINLCSFLASKAPTRTGDGGSQCSQSFFLIILVNLASRFWENCRTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKV0</accession>
    <name>A0ABV2AKV0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001983</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000595">
        <property type="protein sequence ID" value="MES1920299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8594" checksum="019F215675DFCBDF" modified="2025-10-08" version="1">MISYARTCSWPPGDITFAIRGITLRQADSLADDKTCQCLHLHLVIENNIYILKLHMEVGSNKTQFVELVKHTHQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL16</accession>
    <name>A0ABV2AL16_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RNA methyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the class IV-like SAM-binding methyltransferase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000464">
        <property type="protein sequence ID" value="MES1919972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18086">
        <property type="entry name" value="HsC9orf114-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003750">
        <property type="entry name" value="Put_MeTrfase-C9orf114-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12150">
        <property type="entry name" value="CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12150:SF13">
        <property type="entry name" value="METHYLTRANSFERASE C9ORF114-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02598">
        <property type="entry name" value="Methyltrn_RNA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="alpha/beta knot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="286" mass="32082" checksum="7D611668910883CA" modified="2025-10-08" version="1" fragment="single">KMSLSVALPGCILDKAQTPMLKAYLAGQIGRALTIFKIDEIVIFSENGCKIPNPSTKSKDPNLILYKLLCFLETPPYLRKALFPMSDDYKHVAVIKPLESLHHPLKHSFCKYREGVITENNGENSKVNVGYEELVSVEGEYKINERVSVRLKKNKRAGKIVSRKRLQKKTAYSGYSVRLANGLNGVFKNTPFKNGYDLTIGTSERGKDIRRINESTKLTEKKHALIVLGGPKGLENCLNAKRKKIRAVQNMFDHYVNAGIAQGSRTIRTEEAILIILTAFNDLCKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL30</accession>
    <name>A0ABV2AL30_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000633">
        <property type="protein sequence ID" value="MES1920368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047025856" evidence="1">
        <location>
            <begin position="18"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="29856" checksum="BDF04A6FED9E5104" modified="2025-10-08" version="1">MLQIIYTILLIASPVATYSFPMPSSPAGPARNETCPMQFGPPCNNSGLDFVVTEPVIATRARIGIALSPYAPNATSPILVGLRLYRLGCVGDRPLLTAQTRPVSPSLQCMVFEFRFPRRRFVLQPGRYRWESPQSSLFPVFQGASTDRIEAGGILTARERRIRCPFEIDLFDPMFSFAFEASPIRSVRAGSRSRYSELLQTRMVNVNMTEIARYALDRSMNSISQRIGILREEMTDLTGALIQMCYMLLRRNDVTERAFLRRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL55</accession>
    <name>A0ABV2AL55_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000650">
        <property type="protein sequence ID" value="MES1920403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16892" checksum="502152EB1E9A8665" modified="2025-10-08" version="1">MTLLDRYPYLMDYIRKESTLRHFRRKNGTFVDRDKFINAVKKGKMNKEQNLLLYKLIERKNKEMISECYGRNPSSHLKVLLTTMSPRSPKFHIRETEHGPKFYKYIDNQKQYVLKDIETDYEKKVYQRFLRIKGFVSKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL68</accession>
    <name>A0ABV2AL68_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Lipid droplet-associated hydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001898</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Lipid droplet</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AB hydrolase superfamily. LDAH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000550">
        <property type="protein sequence ID" value="MES1920204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019363">
        <property type="entry name" value="LDAH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13390">
        <property type="entry name" value="LIPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13390:SF0">
        <property type="entry name" value="LIPID DROPLET-ASSOCIATED HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10230">
        <property type="entry name" value="LIDHydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0551">Lipid droplet</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="317" mass="36307" checksum="82448AD32B42ED44" modified="2025-10-08" version="1" fragment="single">NIKTIMNKNHFLSISRSQSTFFRLEKTDLGTMEVFDYPSISDDEIKFVILLTPGNPGVIQIYEKFLKSLYLSFNKKVRVIGVGHLGHSKYDHNNKKIFTVNQQIEKSVVFIRKLAKDNKTKIILFGHSLGSYININVVKEHPEFPVIYMIHLFPVLCKLNIPFSVRLISMPYFRKIVSSVVSSLPQTTKLKGIKLFSYSAQEAELAVAYSSNDHFLENILAMGDEFIGMLEEGLPDDIVSSIKETKDKALFVHTTLDRYVTPKVFKYIQSTIGFAKFTVIPAEEKVDHAFVKNDSYDLVKKICIEELENANFLKNKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC5</accession>
    <name>A0ABV2ALC5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ornithine decarboxylase</fullName>
            <ecNumber evidence="6">4.1.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002143</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-ornithine + H(+) = putrescine + CO2</text>
            <dbReference type="Rhea" id="RHEA:22964"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="ChEBI" id="CHEBI:326268"/>
            <dbReference type="EC" id="4.1.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amine and polyamine biosynthesis; putrescine biosynthesis via L-ornithine pathway; putrescine from L-ornithine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer. Only the dimer is catalytically active, as the active sites are constructed of residues from both monomers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Orn/Lys/Arg decarboxylase class-II family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.17" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000692">
        <property type="protein sequence ID" value="MES1920478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="entry name" value="Alanine racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="entry name" value="Lyase, Ornithine Decarboxylase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022653">
        <property type="entry name" value="De-COase2_pyr-phos_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000183">
        <property type="entry name" value="Orn/DAP/Arg_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002433">
        <property type="entry name" value="Orn_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11482">
        <property type="entry name" value="ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11482:SF6">
        <property type="entry name" value="ORNITHINE DECARBOXYLASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02784">
        <property type="entry name" value="Orn_Arg_deC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01179">
        <property type="entry name" value="ODADCRBXLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01182">
        <property type="entry name" value="ORNDCRBXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="Alanine racemase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="PLP-binding barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00878">
        <property type="entry name" value="ODR_DC_2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn/DAP/Arg decarboxylase 2 N-terminal" evidence="9">
        <location>
            <begin position="49"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00034115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00034138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00046672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00049127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="384" mass="43966" checksum="8D796036B4B1AE5F" modified="2025-10-08" version="1">MNTFNTNNIEQKIRIKIDYSKTLEKTLLEMSTKNAEKQNPFFLVDLACLSRKLKHWEKTFPFVKPFYAVKCNPDEKIVSVLEKMGVNFDCASCSEMQFLLRKKNFDSRRIIFANPHKSQKEIKFALSNKVFLMTFDCKEELHKIVDAAKSFKNFENILNKIRIVLRIKVDNPKALNKLNEKYGAPLETIDQIIEETKRLKLVLEGISFHVGSGCYDANAYVNVLENAKYAFQKAKQLCSPLKILDIGGGFPGGSHGGFMVNGEHDKIFLEEIGNVFDEKMNTSLSFLKDVTVISEPPKLLSQGDEKLDLNQNLAEMDFGAERCSYFYGPTRSEEDLVSWDQKMPFLKIGALLYFTSMGAYTSSISSKEMEIEEVETFYVWIENA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF9</accession>
    <name>A0ABV2ALF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002002</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000608">
        <property type="protein sequence ID" value="MES1920319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050221">
        <property type="entry name" value="26S_Proteasome_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032501">
        <property type="entry name" value="Prot_ATP_ID_OB_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23073">
        <property type="entry name" value="26S PROTEASOME REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16450">
        <property type="entry name" value="Prot_ATP_ID_OB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasomal ATPase second OB" evidence="4">
        <location>
            <begin position="89"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="ATPase AAA-type core" evidence="3">
        <location>
            <begin position="202"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="270" mass="29407" checksum="1118065D6572C4C9" modified="2025-10-08" version="1">MSNIAVRPICEESHLFAKKSLLLKEGISIIGTPSPKTNSAFLGGVHKETMLKQVNVRREYIAAECLNLRREMSNATEEVKRIQSVPLAVGQFGEMIDSERALIHANSGQTYLSRVLSTIPRERLKTNAPVALHRHSSAVVKVLEPHVDAAVSAVTITKRPEVTFADVGGLDAQKQEVREAVELPLTHAELYRSVGIEAPRGVLLYGPPGTGKTMMAKAVANSAKATFISVVGSEFVQKYIGEGARMVRSVFQMAKENSENGAIIFIEFPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH9</accession>
    <name>A0ABV2ALH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002161</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000704">
        <property type="protein sequence ID" value="MES1920495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10422">
        <property type="entry name" value="RNase_Ire1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.180">
        <property type="entry name" value="KEN domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045133">
        <property type="entry name" value="IRE1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010513">
        <property type="entry name" value="KEN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038357">
        <property type="entry name" value="KEN_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13954">
        <property type="entry name" value="IRE1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13954:SF6">
        <property type="entry name" value="NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06479">
        <property type="entry name" value="Ribonuc_2-5A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00580">
        <property type="entry name" value="PUG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51392">
        <property type="entry name" value="KEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Protein kinase" evidence="4">
        <location>
            <begin position="1"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="KEN" evidence="5">
        <location>
            <begin position="124"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="31894" checksum="39661CF44DDA1A8A" modified="2025-10-08" version="1">MGLSRRLEVDQSEFNTAAKGSSGWQSPEVLCDGRKTKAIDIFSLGCIIFYILTNGHHPFDDDPLNRNFEVATNKDELPKGLLNLPQGCSVAPEAVHLVENMLKRDPDSRLRISDTLLHPFFWAEEKCLRFLCAVSNRFEKESADSAARALLESAAKQVLGDSWKCKIDKALISDVGRFRKYDFTKIKDLLRIIRNKAFHHNEIPKELKVLIGKYPNGFYNYFNIRFPRLLMYSYLAVGAVCSDEGAFAPFFGGVSDHYRKLLTKSARISVRDWYPWIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI8</accession>
    <name>A0ABV2ALI8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Deoxyhypusine synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002028</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the deoxyhypusine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000624">
        <property type="protein sequence ID" value="MES1920349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.910.10">
        <property type="entry name" value="Deoxyhypusine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002773">
        <property type="entry name" value="Deoxyhypusine_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036982">
        <property type="entry name" value="Deoxyhypusine_synthase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11703">
        <property type="entry name" value="DEOXYHYPUSINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11703:SF0">
        <property type="entry name" value="DEOXYHYPUSINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01916">
        <property type="entry name" value="DS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="DHS-like NAD/FAD-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="215" mass="24425" checksum="72E995C0BC2F12F6" modified="2025-10-08" version="1" fragment="single">MADKNSTIPKKASEAVLVECSPMPEGHPEVKGYAFDGDFDSEAFFRSFKTTGFQATNLGLAAETINKMIKWRPTQKTTETKENQKCTIFLGYTSNMISSGIRESLVYLVKHRKIDVIVTTGGGIEEDLIKCLAPHYIGDFNLDGKKLREKGHNRIGNLLVPNENYCKFEDWIVPIIHRMQDEQDQNGVVWTPSKVIDRLGKEIDDERSVCYWAFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ5</accession>
    <name>A0ABV2ALJ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Tr-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002199</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000725">
        <property type="protein sequence ID" value="MES1920537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050100">
        <property type="entry name" value="TRAFAC_GTPase_members"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23115">
        <property type="entry name" value="TRANSLATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="4">
        <location>
            <begin position="4"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="30884" checksum="816694933090B6E2" modified="2025-10-08" version="1">MLSETSSADVAMLVVDTSTDNFERGFCKDGQTREHSILARSLGISKILVAMNKMDSTKWSKTRFDQIEKTLDHFLKSIGYKSTLFVPVSGLEGHNLVRSYTECDWYTGPTLTDAINSIKPVTRDLSRPVRLLVSGREHSFKYGNVVLGKIAVGSLMVGEKLVAMPLNMAVQVKSIRCGEKEVVVGIAGENVEAAFGKETTLETGFVVCDQMNPIPVVKVFSAKITTLKLDLPIIRGQTLLLHVHNIKTMVSVVKIEKVLNSKNAKKTKMSREQCQGNCSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK5</accession>
    <name>A0ABV2ALK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002201</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the WD repeat cdt2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000727">
        <property type="protein sequence ID" value="MES1920539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051865">
        <property type="entry name" value="WD-repeat_CDT2_adapter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22852:SF0">
        <property type="entry name" value="DENTICLELESS PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22852">
        <property type="entry name" value="LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="2 6" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="12"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00038344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="15523" checksum="8D02D2C092D7D594" modified="2025-10-08" version="1" fragment="single">MSTQTDHDSSNSDNHGVSSVNFAFNDRNVIVSTGSLDGKVKLWDLRKASKSKTKPPMIMEVPFKNASTGLPDAVVFGAVSPSGDRFVGTCFGSTSFYCDLGAPTADKFVLKGLKGAKTSSFYVKTAFSLGGDFFVSGGSNSVVSVWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL9</accession>
    <name>A0ABV2ALL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Medium-chain fatty acid-CoA ligase faa2</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">FAA2_2</name>
        <name evidence="4" type="ORF">MHBO_002183</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000716">
        <property type="protein sequence ID" value="MES1920517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272:SF33">
        <property type="entry name" value="AMP-BINDING DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="447" mass="50160" checksum="4F9498905B58C7A7" modified="2025-10-08" version="1">MYTSGTSGRPKGVMLTNQNAVSTLRNCIGSFQSTENCALLSYLPLAHIFETMIEFLCILTGGHVGYFSGDIKLIASDLVELRPHYFVGVPRVFDKMYSRVMASVADASFVKRWLFHFALKRGIDQTHCAASLTRPKSLDALVWSKLRQKLGFDRVKHLVTGGAPCPTHLIEFLRVMTAGEVLQGYGLTETFAVVSLTNGDDPNLGQMGLPLNCEIKLESVADTDYDPNGAEARGELTLRGECLFKGYFRDEARTREAVRDGWFYTGDVCRLNPNNTISVIDRIKAIFKLSQGEYVSPEVVEIAYGRSGAVNQIYIYGDSTKPFLVAVIVPDVNWALELLSDIQETKTAKSQLSSNSITEFVETFEKLCSENDLKLNSEMQKTLTNFEENLSGFEKIRKVHLEYKIDNQFNGFSPENGLLTPSFKLRRTFLSKRYKKILDSLYEKMGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV4</accession>
    <name>A0ABV2ALV4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Alanine aminotransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002308</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000789">
        <property type="protein sequence ID" value="MES1920657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045088">
        <property type="entry name" value="ALAT1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11751">
        <property type="entry name" value="ALANINE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11751:SF29">
        <property type="entry name" value="ALANINE TRANSAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="93" mass="10676" checksum="CF2A272C75E20F88" modified="2025-10-08" version="1">MVKTLTLKNINKNIIKFTYQVRGPIVNKAYQILEELKTPNHNYPFKKIYMCNIGNPQELGQMPITFMRQMVAACVYPELIKNKSVPSDGCHSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM44</accession>
    <name>A0ABV2AM44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Acylamino-acid-releasing enzyme N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002348</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S9C family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000816">
        <property type="protein sequence ID" value="MES1920705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045550">
        <property type="entry name" value="AARE_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19283">
        <property type="entry name" value="APEH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acylamino-acid-releasing enzyme N-terminal" evidence="2">
        <location>
            <begin position="29"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="13975" checksum="D62FCD9275D1453C" modified="2025-10-08" version="1">MKKCTVARATQLWKELLKVPSKTAQFVGKETVVVSTNVPDISSNKTRKRLNFFSNSILTEKQKFVPIGFPVDTSSEMSCYSVSPSGNRLCVVRKHPSKEKVQVIDILSKEKLLFTTSFPNLFSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA6</accession>
    <name>A0ABV2AMA6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transcription initiation factor TFIID subunit 1 histone acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002410</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000857">
        <property type="protein sequence ID" value="MES1920772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040240">
        <property type="entry name" value="TAF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022591">
        <property type="entry name" value="TAF1_HAT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900:SF0">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12157">
        <property type="entry name" value="DUF3591"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription initiation factor TFIID subunit 1 histone acetyltransferase" evidence="3">
        <location>
            <begin position="456"/>
            <end position="675"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="683" mass="79255" checksum="04E6A9BE794D2DF7" modified="2025-10-08" version="1">MIQSSQKNWYFYYFENPGKRFGPVAREHVPTGNRVLVWCPGMKFWVPSNSVKSLKTQPIPSLQYTQKQTNPKNEDLAAISSDFSDFVPKDDKIVKMERELAEKKLPKFSRPKCDNDISLEKIWLEKSGPVFKMENFEKSFFGDKNPESKSAVERIKFAIKILPRLDFYEILKSCVYTAKAKRKDKITFSRYQKIDFSDNIPVEPLISRENLLHKNFLDISSCVKNITNSNDCFSEELENSSEKKKQTKNFAKTQKMAEHLIRITIKNTSQQKIMSKKWAEFKKSTKKKQILPEKIYFARNENSEKFPEILDKTDQSKQSKTLIKPKSANKKLQNFNESSEVNCDLSDFFHRLQNSNFDRTIEKRFCNYQIYLNLNDPFCIAYLKDDLISKKDHPTNKTINGIKQKSTPVFKDSAASLRESLRLGLMGKSRNKKSSLERDEAHRYKIGVNLNATDDSETYRLNVWHSLLAIKMPKKLYPFRMTPGALRYCHKPKLRSLKNKVVEIIFESKIKSGKNGDPESVADVSAENGEIALFEYIEQRPCFLHNVGMAYRLHFYYREGAANENLPQTGKEETSHFKLVKLKKAEASPFLGEITTKESVLSVDNNLFRAPIARHRNKTTDFMLIRSSEKDKWLIRKIGAIYAVGQLQPKRLVFSPKSQSATELLKNRISSIILEKFLVFEPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ0</accession>
    <name>A0ABV2AMJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002513</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000938">
        <property type="protein sequence ID" value="MES1920897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22154" checksum="0663EF3E99372A2E" modified="2025-10-08" version="1">MSEVLRLYIDIPPNNLRKRTNDILKNYLFVCKKSVSLISVIIETVSKIRKAYAFFWINKHLRNFGSVEKAKSVNGIGELYVLLMNAGMDYEAILQNFNDKFKYEPLEQIHIGENQFVNNRLFKIYQIVEISLNSVKYLNFLCFREFKILVNEKIDFSAQEIFGLAVKFANLKKLYIKKYQNLSKICEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMN7</accession>
    <name>A0ABV2AMN7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002229</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000742">
        <property type="protein sequence ID" value="MES1920572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044688">
        <property type="entry name" value="SCI-1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34117">
        <property type="entry name" value="STYLE CELL-CYCLE INHIBITOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34117:SF1">
        <property type="entry name" value="STYLE CELL-CYCLE INHIBITOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="121"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="30060" checksum="FB6BF4C1AB3AD760" modified="2025-10-08" version="1">MDSLKISKEDFYKKSTEFRVWLFEQKGMYFDEQKSKKLKKLFKRFAKKWNKGKLSQKYYEGINSSAVEVPATRHQWNFDLSTRDKNTLEKIKDRVDTETYHTKTENTRKERPKIANELPMQTEAERANKRLENNILQRRERERFREEREELRDNIMPRPEKGTREAMIEKKKIKREKNRTRDEQMPALNDKFLMGSSKDDYKNMLNRKRVRQERKNIEQFERVKKHRQAEREKIEYFKQLLQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW5</accession>
    <name>A0ABV2AMW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002617</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001019">
        <property type="protein sequence ID" value="MES1921013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19939" checksum="62F40FFD39B26E0A" modified="2025-10-08" version="1">MSNLGRAIRNNISQRRVEQKIKNSDINSRNRNIDSFRPPNFRGKKSESLASKCEIGTVDDFLVNVSRSRKNFVLRSRQDDIVLVENGLDDLALKKDLSRSGLSNLKKMANLNKSELLEDIKVIRRPRWDSATDPNELAFSEENAFIDWKKDLSLRFTVYFTKIANFKFLNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY2</accession>
    <name>A0ABV2AMY2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002324</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000801">
        <property type="protein sequence ID" value="MES1920677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24744" checksum="40268B8BE9DFF1A0" modified="2025-10-08" version="1">MFRRTLKTKRVVELFYRSKNFKTFNIKKANKFKYNKTIYELNKIPISQNSNVLTAIIGLGIFYYEKIELDVILKSKTLKEFTRNIKRAKPLTTSFLVVLCISGLFAISEFKQRGTIIKKINLLMPSLKRSQNNIRNSFVRIHYGNTKILKIPLYKLQMNQVTPIPNYWKYKKNNKKYKLYLYENSNKFENSELEDVVKTVRMRKAGFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN28</accession>
    <name>A0ABV2AN28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA mismatch repair protein, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">MLH1_1</name>
        <name evidence="5" type="ORF">MHBO_002662</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA mismatch repair MutL/HexB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001062">
        <property type="protein sequence ID" value="MES1921066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16926">
        <property type="entry name" value="HATPase_MutL-MLH-PMS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00782">
        <property type="entry name" value="MutL_Trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014762">
        <property type="entry name" value="DNA_mismatch_repair_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013507">
        <property type="entry name" value="DNA_mismatch_S5_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002099">
        <property type="entry name" value="MutL/Mlh/PMS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038973">
        <property type="entry name" value="MutL/Mlh/Pms-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00585">
        <property type="entry name" value="mutl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073:SF12">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MLH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01119">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13589">
        <property type="entry name" value="HATPase_c_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01340">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00058">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair protein S5" evidence="4">
        <location>
            <begin position="216"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="321" mass="35966" checksum="E598F2410081C552" modified="2025-10-08" version="1">MAILRLSENVVAMIAAGEAVERPSAVVKELVENSLDAGSSEIKVEIDGGGLEFLSVSDNGHGIEAKDFELLCERHATSKITKYDDIENVKTFGFRGEALASISAVSKITVVSKTKNDKLASKGVFVNGKLVSPIEVSAGLNGTRITVENLFYNIPLRQRIFSFSLKEEKTRSLDIVKKYAIDNPKINFIYAKQSHNKNRLCSPLTKQNGPTPLTMIKLFYGQKISEKLIQIRDGNDAIDFEGCISKTDLTIDKPIHIFFVNKRLVSWKKLSSDVQTLYKNSVHNKFKTFFYFSAKIDRKLVDANVHPKKEEVLIRNEVNFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANL6</accession>
    <name>A0ABV2ANL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001196">
        <property type="protein sequence ID" value="MES1921255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16697" checksum="A628F14B6CD90DD6" modified="2025-10-08" version="1" fragment="single">MYTRDDAHFKKFIREEKTACKLLCGMTKKYIKSIQNGQLPKLIKPGTRPLEKSECTRFLNLMIEDLLPEKIEGKFILTRYGHFEDKKEFVKELFQEIKKHSNLNLKATIKTLIQISKEIDYERIFDDIAEEWASRIILKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP63</accession>
    <name>A0ABV2AP63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002854</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001232">
        <property type="protein sequence ID" value="MES1921309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15632" checksum="82C459C583B6BC65" modified="2025-10-08" version="1">MDCFSLVEKSRSAECDKFWALKPKNSVIDENCTKLFTDNPLLNQLQCHDFIIVVFEAFNSENEFLANVDFINTENAFTGTYPKGTTKLVYKTYFENFDSHSLEEIEVKENASIFNRIFHFTQVDFFVDGSLNFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP65</accession>
    <name>A0ABV2AP65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002809</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001196">
        <property type="protein sequence ID" value="MES1921254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11752" checksum="E30BE292AD3F710E" modified="2025-10-08" version="1">MLVRKTLVMLAKMYGYSPEMLLSILRSDSQKSREILGVKWKDDFKSFRCDSRCGCVATQVSKRLLPKPIEILRRVPRGPFLIYCACKWKSFFAFKKLREI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE1</accession>
    <name>A0ABV2APE1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">inorganic diphosphatase</fullName>
            <ecNumber evidence="3">3.6.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003073</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001470">
        <property type="protein sequence ID" value="MES1921546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.80.10">
        <property type="entry name" value="Inorganic pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008162">
        <property type="entry name" value="Pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036649">
        <property type="entry name" value="Pyrophosphatase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10286">
        <property type="entry name" value="INORGANIC PYROPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00719">
        <property type="entry name" value="Pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50324">
        <property type="entry name" value="Inorganic pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00387">
        <property type="entry name" value="PPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21471" checksum="674DF101D97EFC84" modified="2025-10-08" version="1" fragment="single">TEEKIELSKDENFNPLKQDTLKNKGAEEILRTFHLGTIPFNYGFLPQTWEDNKQKDFFSSLPGDDDPVDVVELSNEPIETGKIIHFKALGALCLIDQGETDWKIIGISSENDLFDKICNLDDIRKHFPGKIEQIKEWFVYYKTAEGKQKNKIGHEESVLGAEMVRKVIEKTHSTWKKKFSKYYKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG1</accession>
    <name>A0ABV2APG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Slx4p interacting protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SLX1</name>
        <name evidence="2" type="ORF">MHBO_002945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001331">
        <property type="protein sequence ID" value="MES1921414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048749">
        <property type="entry name" value="SLX1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21202">
        <property type="entry name" value="SLX1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Structure-specific endonuclease subunit SLX1 C-terminal" evidence="1">
        <location>
            <begin position="66"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19156" checksum="6B8DC1720FF5D0D9" modified="2025-10-08" version="1">MDKLIPKCPPPHIKITESSLEELCRKFATQVESRLIDLDEYFASNELNGITVKPTDRPGKEGFNLKCKFCEPENGMDSSKILTFCENCHLIAHATCFALKLLKEDDFQIIPSDGKCPDCGEDVKWAEMAKNAMLSKSIKKFFTKIQQNFEQIFSRRERRKDRGRKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL2</accession>
    <name>A0ABV2APL2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Pre-mRNA-splicing factor SYF1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">XAB2</name>
        <name evidence="10" type="ORF">MHBO_003142</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the crooked-neck family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001553">
        <property type="protein sequence ID" value="MES1921615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056350">
        <property type="entry name" value="HAT_Syf1_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055430">
        <property type="entry name" value="HAT_Syf1_CNRKL1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045075">
        <property type="entry name" value="Syf1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246:SF5">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR SYF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23231">
        <property type="entry name" value="HAT_Syf1_CNRKL1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23220">
        <property type="entry name" value="HAT_Syf1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Pre-mRNA-splicing factor SYF1 central HAT repeats" evidence="8">
        <location>
            <begin position="2"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Pre-mRNA-splicing factor Syf1/CRNKL1-like C-terminal HAT-repeats" evidence="9">
        <location>
            <begin position="119"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF23231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="428" mass="50173" checksum="C61D23CA4CED1BE3" modified="2025-10-08" version="1" fragment="single">TRDVYEEGVNSVNTVRDFEYIFNTYCQFFEIMIRAKFERGETDDEDEGDFSFAGDNVDLLMARYEDLLKRRPLLVNSVLIRQNPHNVGCWLSRAKIYQRQEEPLKVIESYAMAIKTINPDKCRGNPHMLWIKLAKFYEDNSDDLDNVRKTFERAVMYPFKNVDHLATVWCTWAETEISHKNYEKALEVIKMATMLPHKKARFEEKSVGDRLVAQKRVYRSPKLWALYADLEENLGTFETTCAVYETAMELRVATVQMILNFSTFLEKKKYFEKAFQTYEKGVALFRTPHSIPIWERYISKFVARYGGTKIDRTRSIFEYAVKSFRAVEAKDILVKYANFEEKYGTPKKAMAVFDKMCDLLRGKDKYEAFLVYLNKATEAFGAIMTRSIYEKAVKVLPDAFVPHICIRFANLETRLGEVDRARAVFRYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN1</accession>
    <name>A0ABV2APN1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protein required for normal CLN1 and CLN2 G1 cyclin expression</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">CTR9</name>
        <name evidence="4" type="ORF">MHBO_002842</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001225">
        <property type="protein sequence ID" value="MES1921292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031101">
        <property type="entry name" value="Ctr9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14027">
        <property type="entry name" value="RNA POLYMERASE-ASSOCIATED PROTEIN CTR9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14027:SF2">
        <property type="entry name" value="RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12895">
        <property type="entry name" value="ANAPC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="131"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="27016" checksum="F23BA5620BCE97C9" modified="2025-10-08" version="1">MADFLYKKLSNVSKQIKEILVTKRNNEPIDEKAENCFLQLREICGEANDLEQQYKNDVLSLAKSGMAEIKLLLENKQHCYRLLSSSISLSPKNSAALRLKGNLLYSDKKHEEALSCFRSAASIDGKLEVDANFWMAIGLCLFQLNKFEEAETAFSKATNLDNSSDENCVCLIITLLKSKNKNCENNFSKAKTKFAKIIQNVKTGLSKNPKNPFLLFFAADFLFYKGEIEKVVFENLER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU7</accession>
    <name>A0ABV2APU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ubiquitin-protein ligase E3A</fullName>
            <ecNumber evidence="5">2.3.2.26</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">UBE3A</name>
        <name evidence="5" type="ORF">MHBO_003237</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010001657">
        <property type="protein sequence ID" value="MES1921707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="HECT" evidence="4">
        <location>
            <begin position="378"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="250"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="411" mass="47618" checksum="7662A8ADCB6F309E" modified="2025-10-08" version="1" fragment="single">NKSKKIFFGLNLFGIREIFDKIEKLDFNDVKNSLTERFRQIIKNLLSNAIKCQTKNSSKVKRILILILESPSFEKLCGEQESHLIINDFFDFFASLKKSSLEEFAKNFSVYKQKSFERIVHSVQQHISSTCIQMNHNFDIQKINSPIQILNLLHRSKPENPSIFKNDSLCESLKFHLNPDNIDLQSKIKTSIRPHFKWILNTDTKQFLLATENTKEQNEAILSDLSEFSLQRQYNFDSNFNNIVLNENDNSNGNAVGGNGDGNNYGIDREREDNQRVPLRLINDYESMNYEVPIAFPPTERELLEPEEFEVSANSSIVANSVSSVANSIENNGINEIDFDIEERNQFDFDSHLSRYCYFVVCREHVIADTLRFLENYKTKQLKKSLKIVFCKEIGVDEGGLINEFFQVCNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ70</accession>
    <name>A0ABV2AQ70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003346</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001802">
        <property type="protein sequence ID" value="MES1921811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="28172" checksum="B5872F4823D7DAD0" modified="2025-10-08" version="1">MSTGKFKFYKQIQKSLETCVLILGCLKFDKNDNRQYVTVDFLLNILQTTDHLLLKSTVFWSLTNFDDFCYNDNDHKFLESIFNSILKDIASPFLRLQNACCNAVIHFAYSKNASKTERLAKIAPNFIPEWLNFVEIRHQNINIKDYYDSLISFIKNTGKSIKNNLDKVVINVLMALLNNIQIDDKSIYLIVDAFVPIAEILETDFLKIGRPFLDKLLAIFSSNLSKYQQNVFIIKKSSRLSKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ77</accession>
    <name>A0ABV2AQ77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003354</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001810">
        <property type="protein sequence ID" value="MES1921820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10451" checksum="B05212C6A90FF77A" modified="2025-10-08" version="1">MIFLYFLKIFVAKCNRSDILFDPNIESNLFNLEKCPEFVDEGEFCEIEIEKTFGGIYPLIDVFDGVYRKRCKNGVLANHRSLFTSSFFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC7</accession>
    <name>A0ABV2AQC7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ASX DEUBAD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003203</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001616">
        <property type="protein sequence ID" value="MES1921674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028020">
        <property type="entry name" value="ASX_DEUBAD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13919">
        <property type="entry name" value="ASXH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ASX DEUBAD" evidence="1">
        <location>
            <begin position="135"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="29111" checksum="8BDB94176F8EA613" modified="2025-10-08" version="1" fragment="single">GDRFYHFKCNKCQPYQSFKTFSKYKTKKYKMRLSIYNMFLSTNQHYFSENKIKNFANEKFSTKKLNFDNQNFDKKFFSAKFEDKIKFTINYFHLKKVRKGLKINICYLLPNDYNKRMLRKSKRPQMKLATLVRNICSRNSKLLKYDLSNLNSFCLSNFTETEKSILVSLLPNVDNETKKLETVFKNPFFQRDLRLFRDLLQKGDLDQDLRLYRTTTLRKRSDKSSKIFWTDKIVDEIFFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD6</accession>
    <name>A0ABV2AQD6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003419</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001903">
        <property type="protein sequence ID" value="MES1921888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10352">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="25"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="108"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="261" mass="30187" checksum="35124ACF36744EEE" modified="2025-10-08" version="1">MLENKISQKNQNSENKNLNKNGQDHTVFVVNLDHSSKDKEISQLFSQFGKIKRIKIPKKNDGSVKGYGYVTYKNTESAENAIKKLNLAKFKNGILNVQRSRNDQISKRTLFVKNLPKKDCEKELKALFGNFGEIEEIRRPQERSKNGGMKPFCYITFKNILSLEKALKNPKDDFRVKLGKVEKVIKIEKCEALGTQTRIYKERNMSKLTQKTKKLQIPVSVQIKRKKTLKLQNLKNGKNLNENVNLNENLSNEQFSQILNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI1</accession>
    <name>A0ABV2AQI1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">eRF1/Pelota-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003444</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001937">
        <property type="protein sequence ID" value="MES1921916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.60">
        <property type="entry name" value="eRF1 domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.870">
        <property type="entry name" value="Pelota, domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042226">
        <property type="entry name" value="eFR1_2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005140">
        <property type="entry name" value="eRF1_Pelota-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038069">
        <property type="entry name" value="Pelota/DOM34_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058547">
        <property type="entry name" value="Pelota_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004405">
        <property type="entry name" value="TF_pelota"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10853">
        <property type="entry name" value="PELOTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10853:SF0">
        <property type="entry name" value="PROTEIN PELOTA HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26356">
        <property type="entry name" value="Pelota_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01194">
        <property type="entry name" value="eRF1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159065">
        <property type="entry name" value="Dom34/Pelota N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53137">
        <property type="entry name" value="Translational machinery components"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eRF1/Pelota-like N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22413" checksum="C35511DCFA007BDE" modified="2025-10-08" version="1">MKKLYFKIDRKQSGVVGLIPENKEDIWHLYNLISIGDKIQAFTDRKVVSTAKTNPSTFRVRIRLKIQIESINVDLDACSLRLSGRNKTLSPHIQLEQYHTITLQLNQKFEIDKEHWDVLSKNRLKMALNNSANAELAVILMDNGSANLYLIAPNLTLHKATVNVAIPKKRNYSAKKHSAVFNLILRRSQNFTIKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN5</accession>
    <name>A0ABV2AQN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003489</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001998">
        <property type="protein sequence ID" value="MES1921964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9909" checksum="B02D8E153917A021" modified="2025-10-08" version="1">MLECFTRYVGVWLIEPAKTLTLRKYVLHFLINMVTINTFLITICLSTCAKKWGGGPAHVSDKNNFLYFLMQVKIYWVNFPTFLNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT7</accession>
    <name>A0ABV2AQT7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">USP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003373</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001837">
        <property type="protein sequence ID" value="MES1921836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8969" checksum="B73BEA0D9A0CE191" modified="2025-10-08" version="1">MGNTDWLVKKEIYELKSFVMYNSYDQNGESGHYFAIVKCGESWYRLSDMRKKELDISDDRFVTEYASTLFYVLKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW9</accession>
    <name>A0ABV2AQW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003549</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002111">
        <property type="protein sequence ID" value="MES1922032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19039" checksum="BB2529BF8BC10616" modified="2025-10-08" version="1" fragment="single">MTEDMYLDIERRSVGSAERIVVICDGISQEATDLINSSVENRVIAIRMPVDEGLDYFYDDLTFMINASVDGEGITSGRVKELRLSENGITVFGFDRTDDEIYQYCEALDKNFVSSDPNDKTSHSIRLSKLLANDSFDILLNCKTIGRYRMLSGMLEDVYKSKKEFDKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY7</accession>
    <name>A0ABV2AQY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003588</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002174">
        <property type="protein sequence ID" value="MES1922069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="11119" checksum="15AAB6EFE2F996F1" modified="2025-10-08" version="1">MSKTFSEGASFFTDDENVPPHLRRTFYSFMIPNENRNLYLDTLNLDHKVRVRVFLDQHLSVWLILVNASFVRVRYSNTMGFSLNYNIYYCGVVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD3</accession>
    <name>A0ABV2ARD3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003619</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002217">
        <property type="protein sequence ID" value="MES1922104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046351">
        <property type="entry name" value="UTP4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44163">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44163:SF1">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="24515" checksum="605FEE13194C2015" modified="2025-10-08" version="1" fragment="single">KTTTNSFAGKIFDADINYSKKLFVCACEDGTARIFKIDEKLSYLTKIVISQVRLTSIFWEYKKSNSIISGDGNGILTVWDFETKRNISRLTTNVSDHKNDINSICVIENTIITGNSVGHTSFWDILTGTLLSSFKEHSGAVLAVAALTENGQNLVYSTGEDSKIALFFKTREELWVKRNVFSPLKHEIYSLAVNKQKGNLFCGGIEGILAITFPQNNLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE7</accession>
    <name>A0ABV2ARE7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003757</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002464">
        <property type="protein sequence ID" value="MES1922251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="357" mass="38936" checksum="0F54F3829DBE5B94" modified="2025-10-08" version="1" fragment="single">MDLKIRKKTEEKNKEVLKIYAPQVAEQIRLLETQGRHAEARQVMNKFEDSPMGYAYKAAANKPYNSEAISAIQKLNADTGKISDLYTELQESSTVGRGLAGVQQGFFGYRAECATLIDDLKQNGTLLDLNRKLSSGGFKTLSEEEKMLFNSLRANIEIHKAIDKRIPESYRVGEGLGASLGFMAEFIATGGVGKAAATAIRGGVKAVGKKAITRGVKNITAKLVQSGMQTAAMPTFYKDVATKISKGECVLDAIGNSYYDTFKENISERLFKPKFSGVGQKNAVRRFLTQTGSAVADAKGFLGLLKGGFEEALEEKFSDMMGAAKDTKTWGEFADQSLGTLEHNRQMLWSVGIMCGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK3</accession>
    <name>A0ABV2ARK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003624</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002231">
        <property type="protein sequence ID" value="MES1922109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15068" checksum="F8F15154B26491DA" modified="2025-10-08" version="1">MDKKKKIFIIATMIFVLTIGCLILSFYEPIEKTAISDLLRALFAVGAIGYIIVCVLYVVFYVAGKKETIRNIPDNPDNRSYGFIQAAEADEPLSEQFIEDDPLDYDSYTVEKHLNSFIQSGYLNESNVWIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ9</accession>
    <name>A0ABV2ARQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003649</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002264">
        <property type="protein sequence ID" value="MES1922136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13912" checksum="F6CD5EF94DF17DF1" modified="2025-10-08" version="1">MFKFYIHIDIKDYTGTLDVAKKDKCDEAEVVLWNVPGKKTKYGPVHVRISHGLINEEICEVGALFNCGLRNHHIKLSSDRHVLVMPYHFSFVSRGTVCDIYWNMKGACVIVCLYCSAFVTVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS2</accession>
    <name>A0ABV2ARS2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003882</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002687">
        <property type="protein sequence ID" value="MES1922375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="52" mass="5899" checksum="898E9BB2C7FBBA5F" modified="2025-10-08" version="1" fragment="single">MSFLSALKYFAKSIISYIINLVDSYAMLCIGLFTTSIIVFLSFSTVYLNVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU8</accession>
    <name>A0ABV2ARU8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Establishment of cohesion 1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ESCO1</name>
        <name evidence="2" type="ORF">MHBO_003604</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002195">
        <property type="protein sequence ID" value="MES1922087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028009">
        <property type="entry name" value="ESCO_Acetyltransf_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45884">
        <property type="entry name" value="N-ACETYLTRANSFERASE ECO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45884:SF2">
        <property type="entry name" value="N-ACETYLTRANSFERASE ECO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13880">
        <property type="entry name" value="Acetyltransf_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase ESCO acetyl-transferase" evidence="1">
        <location>
            <begin position="49"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13646" checksum="5B57681A1440F5C3" modified="2025-10-08" version="1">MSTSSDTNKNLKIYVCLKSDRIVGFSSIKKLNFAYELEENMINYKKKKSVLIGIDKIWVCETQRRLKIAFTLLQLARKYYYKNKIIDKSKMAFSQPTKDGLKFANWYFESKIFVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW3</accession>
    <name>A0ABV2ARW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Vacuolar protein sorting-associated protein 13</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">VPS13</name>
        <name evidence="2" type="ORF">MHBO_003920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the VPS13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002739">
        <property type="protein sequence ID" value="MES1922408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026847">
        <property type="entry name" value="VPS13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16166:SF93">
        <property type="entry name" value="INTERMEMBRANE LIPID TRANSFER PROTEIN VPS13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16166">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="19169" checksum="4604AE8A1DAB2B04" modified="2025-10-08" version="1" fragment="single">RFGKSVASGVTGIVTMPLSEIKESGSKGIFKGAAKGAIGFVAKPLSGMADAISTFSTSISDTLPAIEQRLRPTRFPRMFYGEEKSIKSYNADEAQITDILRKSQGGRHVGLNFVDYFFALDPISKDGNIKILVVVGSNKFLCVKDELNFKKEVFPANVAFFEWKSFAKICKRSVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX1</accession>
    <name>A0ABV2ARX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003927</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002754">
        <property type="protein sequence ID" value="MES1922416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="226"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="253" mass="28754" checksum="05860D7645103981" modified="2025-10-08" version="1" fragment="single">SKLMNKLLVLIILLFRYVYPYPLVILVSEQKVTYCAHLGDKEKSKTTISKFVGEANVFSQRHFDYIVILGEFQFYNENSAESNNNANCDKPGNLENLLNVKNRKVKDTENIKDRLVAIFATSSNKGHYHFFPNVDTEEYVMAYQITKYLEKTLLASVGKVAGAPVISKTTLNYLMADVDSDQPILVSKETNFAINNFFRLLRDRKPSLPFVRVLRGTDYVLTESKYFIPAIASTLGVIIIAAFTVVLQLFLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX8</accession>
    <name>A0ABV2ARX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Post-SET domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003808</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002548">
        <property type="protein sequence ID" value="MES1922299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050777">
        <property type="entry name" value="SET2_Histone-Lys_MeTrsfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22884">
        <property type="entry name" value="SET DOMAIN PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0158">Chromosome</keyword>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Post-SET" evidence="8">
        <location>
            <begin position="29"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8421" checksum="72A45970ADB44ED4" modified="2025-10-08" version="1" fragment="single">KTIVFFAARNIKRGEELSFDYNYETLGENISICHCGSENCRGSISSIDNNKNIFTKNTNFKIFFSRDKLRRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS36</accession>
    <name>A0ABV2AS36_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Kinesin light chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003693</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002343">
        <property type="protein sequence ID" value="MES1922177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13424">
        <property type="entry name" value="TPR_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="59" mass="6504" checksum="0B7D1CEB3B051E1F" modified="2025-10-08" version="1" fragment="single">MNVLKHLMDIAKLLESLGKYEKAEEILKQCVDGFEKNFGKNSAQVAIALSSLATLHVTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS41</accession>
    <name>A0ABV2AS41_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003732</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002421">
        <property type="protein sequence ID" value="MES1922223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="302" mass="33633" checksum="76BE989072206E78" modified="2025-10-08" version="1" fragment="single">MDEELVVQAAEASKYDTCEMCGVRGHRHNFCPRQRKTAIPNALLYEDNPISAPPAILATSKPKMAGAPPISSPITNNRIENGDIVGSRNGHSNSPVRTSGLGNGATAQKKYFVAAPRPDGKPLRQFGNGFEEMYRLGMFADSKTSPKMSQIPILTKQQNFPVLRQKVLQTEAGFGHSMPINFGAYGMRENGLYQNNYVLGGLNFSRPQQELGDSNGMRQNYVFGHSRYPLNRGNGLRVSERNFSLNQSSVARNGMFFGENRNDLDAVSQERGYLGDRYYLGERERSGNRFGPRQNSDFKFCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK9</accession>
    <name>A0ABV2ASK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004069</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003082">
        <property type="protein sequence ID" value="MES1922554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8881" checksum="66214326545F239A" modified="2025-10-08" version="1">MSRLFYQIMMRSHDKFDEDQFTFILEGLLNNIGDPKLLKSNENCLNIASEIIGPKITLKNVLAHTEDYIDVTFRNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS7</accession>
    <name>A0ABV2ASS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003442">
        <property type="protein sequence ID" value="MES1922692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13105" checksum="F93EA68B2F2DFED1" modified="2025-10-08" version="1">MACFDRLKNLDNGVLMIGCEKKVWNGYCGYKCYFPFHSREKRENGISFCVNGEVYLPPQCFVRTEMVVLFIFAGGLCLFAITGILIACLDYSGCLKIGIFVKKRTIRANSMCSESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU2</accession>
    <name>A0ABV2ASU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">VWFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004232</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the proteasome subunit S5A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003485">
        <property type="protein sequence ID" value="MES1922707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027040">
        <property type="entry name" value="PSMD4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003903">
        <property type="entry name" value="UIM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10223">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10223:SF0">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13519">
        <property type="entry name" value="VWA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50330">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="3">
        <location>
            <begin position="5"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="23757" checksum="4A71FA47D4984181" modified="2025-10-08" version="1">MVFEAVVYCVDNSDFSINGDGSITRRQSQSDTINRLAASKIAESPETTVGLISMAGKRTTVMVPSTREPGEVLRTMHSLKNGGRCNILASLKTAQLVLKNRHNKNQKQRVILFIGSPIENDAASLLMKQAKIMKKNSVALDAVHFGIENVQSADNENLRKLVETANSGNNGRLVSVGEGESLADTAFGELAKVPQNGSAEMEDDPELALALKMSLEENQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY6</accession>
    <name>A0ABV2ASY6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NADH-cytochrome b5 reductase 1</fullName>
            <ecNumber evidence="1">1.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">Cbr1</name>
        <name evidence="1" type="ORF">MHBO_004307</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003701">
        <property type="protein sequence ID" value="MES1922783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052184">
        <property type="entry name" value="SDR_enzymes"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45458:SF1">
        <property type="entry name" value="SHORT CHAIN DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45458">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="17475" checksum="D715A43ED9AA3D98" modified="2025-10-08" version="1">MALTYFIAGASRGIGFEFAKQLLASQNNVIAGCRKIESLRSLKSKYPENLLTLTLDVNSDSSIDSAYEDLKSRGIKNLKIDVFIQNAGVADFGDKVFDVTRETAKHVLETNSISPLMVSRKFLDMFAKPASNWCLLRLEWVRYLKTQVLPLFFTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT41</accession>
    <name>A0ABV2AT41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004342</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003808">
        <property type="protein sequence ID" value="MES1922817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10503" checksum="5368F6828705F29F" modified="2025-10-08" version="1" fragment="single">KHTGKILFPPFTLERAKELGKQQSKTAGLTGRGWNESVADIVYSGLCWISLTSCGKFQIEYGGVGKYSIEKRDKPWLPYDSKTSYKKFLGRPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT54</accession>
    <name>A0ABV2AT54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004374</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003869">
        <property type="protein sequence ID" value="MES1922846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="88"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="23305" checksum="CEDC97CB3C5DC16F" modified="2025-10-08" version="1" fragment="single">KKKPPPPPPMPSKKPKNEKDFKKSNISFKFSNASQTNGINPVERKRKEKKKAGLLDLNYDVKIINEQQSSEELDPEKLKELEGIDFEEDEDHKNGDFPLNSNSENEKTNHKNKKPKYIGGARHKKKYHRHEIKVDKVSEPSEVIKKIPSGRRRLFKCYIDWDFVEKVFLFSKLNFWRKKFQKNKFFWRKIKIYEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE5</accession>
    <name>A0ABV2ATE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004476</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004110">
        <property type="protein sequence ID" value="MES1922945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="25367" checksum="13A4B52B815BEFEA" modified="2025-10-08" version="1">MVEEFCRKYDVLVIIAAHPTKPPKEIGKTKLKEAGFYDIRGTGDWYDMAYYGLSVYRDLEDDYSYVRVMKCKFKNLGENGAKVCFKYNSNNGRYIPIDSEPEPDYTPSFEYDNSYWLDENTTQENFEFYENVSKSTNYESRFNEKYNSKYESCGFNSNENIQAKIEFNESNTTNKIQNYDELADGYEQEFPNDNLCMVNRTSNNFDSSVECDTLPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD5</accession>
    <name>A0ABV2AUD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004536</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004307">
        <property type="protein sequence ID" value="MES1923003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13263" checksum="72D3AD073C71456D" modified="2025-10-08" version="1">MSSAYQLFGQLVCDLDIEEDLATTILDRLVEADRLDDKCDELDKLNTTLSLECRRQKRKVRLLNESFDEMKDVVKNMTKATTAVRSGTVRQVLEYSEMADRHAAKAIKLHEEAQGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE1</accession>
    <name>A0ABV2AUE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004306">
        <property type="protein sequence ID" value="MES1923002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9041" checksum="463A4283DD26F96A" modified="2025-10-08" version="1">MIDHDSRVYIWRKRDEEWRPDFVTLRGTRACFEVTILACITSHGVGTITTIKDNINAEKYQQIPNLTPVLVLHFPEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG5</accession>
    <name>A0ABV2AUG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004871</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005597">
        <property type="protein sequence ID" value="MES1923315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6580" checksum="5F28C0F5B6DAAD5D" modified="2025-10-08" version="1">MTNKEKQELKEEIKKEILQELKGKGKGSNFDFKEYKTQVVEDDIKKLEDFMDINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL7</accession>
    <name>A0ABV2AUL7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Sof1-like protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004615</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the WD repeat DCAF13/WDSOF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004566">
        <property type="protein sequence ID" value="MES1923077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007287">
        <property type="entry name" value="Sof1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051733">
        <property type="entry name" value="WD_repeat_DCAF13/WDSOF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22851:SF0">
        <property type="entry name" value="DDB1- AND CUL4-ASSOCIATED FACTOR 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22851">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04158">
        <property type="entry name" value="Sof1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 7" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="40"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="83"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Sof1-like protein" evidence="8">
        <location>
            <begin position="116"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23945" checksum="FD58B2D58FC9D69C" modified="2025-10-08" version="1">MVANSVSWNPMEAANFVIASEDTNVYSFDMRKMDKPKVVHEDHLNAVMSVDFSPTGEEFVSGSYDKTVRIFKVNQYKSREVYFNKRMQRVFAAKFSLDGRFVFSGSDDTNIRVWKAVASEKMGILSKSESKSMDYCDKIKAKFRHMPQIKRISRHRQLPKSIYNAQKLKRTIKNAKKVRIQKYEERTKKPFPHRKNKKGVFAVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP7</accession>
    <name>A0ABV2AUP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004949</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005941">
        <property type="protein sequence ID" value="MES1923385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="8031" checksum="FEF8FD13C7F8DF3B" modified="2025-10-08" version="1">MGPFVPSGSLPANLNLISEHSNVPSESFVAPAIPTEADKGTDNDKGTVADTDVKDVASLNVNGDKTNDDSSSKRTSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP9</accession>
    <name>A0ABV2AUP9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 13">Pyruvate kinase</fullName>
            <ecNumber evidence="4 13">2.7.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">PYK1</name>
        <name evidence="15" type="ORF">MHBO_004649</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>pyruvate + ATP = phosphoenolpyruvate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18157"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.40"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 13">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the pyruvate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="4 13"/>
    <dbReference type="EMBL" id="JBDODL010004710">
        <property type="protein sequence ID" value="MES1923108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004743">
        <property type="term" value="F:pyruvate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="entry name" value="Phosphoenolpyruvate-binding domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.33.10">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001697">
        <property type="entry name" value="Pyr_Knase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015793">
        <property type="entry name" value="Pyrv_Knase_brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015806">
        <property type="entry name" value="Pyrv_Knase_insert_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11817">
        <property type="entry name" value="PYRUVATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00224">
        <property type="entry name" value="PK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01050">
        <property type="entry name" value="PYRUVTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="Phosphoenolpyruvate/pyruvate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11 13" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="8 13 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12 15" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate kinase barrel" evidence="14">
        <location>
            <begin position="7"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1923108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="22177" checksum="0066B435C3F12454" modified="2025-10-08" version="1" fragment="single">MRKNDPITIGYGHIKLVVRDVSEDSLKCQILISGHIFNKKTIYLPDSKINYPKELTEQDKRDLNFAAENKANFVSIPYVCDGKKIKLVRQFLRDKGLENPFIIAKIECEEALINFRQILDETDSILVSRGPLGEEIDLETVTLSQKMIIRKCNVAGKPVITATQMLESMRVNPFPTRAEASDVGNAVFDGTDCVMLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ0</accession>
    <name>A0ABV2AUZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005049</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006349">
        <property type="protein sequence ID" value="MES1923472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7432" checksum="F2B1500DCB875836" modified="2025-10-08" version="1">MVSKRHSMCIEKSIPCLCHSENRKMALDFEKSYIIIRLNYVSGVCASCFLMMNMKHIYLISLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ6</accession>
    <name>A0ABV2AUZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005053</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006376">
        <property type="protein sequence ID" value="MES1923476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20016" checksum="0F2F032B1A27B9F4" modified="2025-10-08" version="1">MAAVGEGDDEKLKKILSPKEMLRSVTSGTASLMIGRYGNIYRPVSGLFLGAIYQLEKEQGGKGEMTQELNELLNMIQYTRPIKQYTNTFEAISYFLPAYAIGIDDAYGAVMAMSKMTMKLSEGKSFTDDEKLMWDNLTAINAAITYAYPNPFTPVLRDIAEKKARGSKKKKSTGRHVYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV55</accession>
    <name>A0ABV2AV55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Minor capsid protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006679">
        <property type="protein sequence ID" value="MES1923533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021080">
        <property type="entry name" value="Minor_capsid_protein"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11114">
        <property type="entry name" value="Minor_capsid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="12751" checksum="EA947852D285D98B" modified="2025-10-08" version="1">MATSIKLVGFDAKRTANRLFDNNRVGTFTAETAARLMTPYVPMDSGTLSSNYRTTPFKVEYLAPYAHYQYEGSGFNFSREKHRLATAQWDKAMNKAKGKELAKEIEEFIKRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV57</accession>
    <name>A0ABV2AV57_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Coatomer alpha subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004918</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005786">
        <property type="protein sequence ID" value="MES1923354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050844">
        <property type="entry name" value="Coatomer_complex_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19876">
        <property type="entry name" value="COATOMER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19876:SF1">
        <property type="entry name" value="COATOMER SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="38"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="80"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="147"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="182" mass="20751" checksum="BF95214697751597" modified="2025-10-08" version="1" fragment="single">GPVRGIDFHDTQSIFASGGDDNTIKIWDFIEKSKKIELLGHSDYVRTVQFHSERPWLLSASDDQTVRVWNWQSRKCISVLTGHNHYVMCAQFHPTEDLMLSASLDETIRVWDISSLKSSTNSASNNSIFENSRNLFNTNGVFVKFVVEGHSRGVNWASFHPTASILVRSSDDREVKIWRYSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB4</accession>
    <name>A0ABV2AVB4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005217</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007194">
        <property type="protein sequence ID" value="MES1923613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11322" checksum="2708489A3C5A3DBC" modified="2025-10-08" version="1" fragment="single">LSDKLHTFPEIEADMTNRGFRKKGGRAGMQGDQAVPITTDWALKDFAANEEFIIAAQNKGAQYLVFTLPTDTAPVVDYDITVASTGIEIDDGSTNVAGVSKLNMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD5</accession>
    <name>A0ABV2AVD5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA topoisomerase</fullName>
            <ecNumber evidence="2">5.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004927</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the type IA topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010005826">
        <property type="protein sequence ID" value="MES1923362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.460.10">
        <property type="entry name" value="Topoisomerase I, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000380">
        <property type="entry name" value="Topo_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013497">
        <property type="entry name" value="Topo_IA_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013824">
        <property type="entry name" value="Topo_IA_cen_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023405">
        <property type="entry name" value="Topo_IA_core_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390:SF21">
        <property type="entry name" value="DNA TOPOISOMERASE 3-ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390">
        <property type="entry name" value="PROKARYOTIC DNA TOPOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01131">
        <property type="entry name" value="Topoisom_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56712">
        <property type="entry name" value="Prokaryotic type I DNA topoisomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52039">
        <property type="entry name" value="TOPO_IA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Topo IA-type catalytic" evidence="3">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS52039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14706" checksum="A9F76C2217940816" modified="2025-10-08" version="1" fragment="single">MDENGIGTDATIAQHISKIQEREYVIKTQQNLFEPTPLGEALITAFQNTEDERIINLSKPHVRATMERNMSSIAEGSLQRSEFLNNCLTEMQSVFRSIKERYGDVIDNAVGGFFESTQNFNNLRELEFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD9</accession>
    <name>A0ABV2AVD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005261</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007406">
        <property type="protein sequence ID" value="MES1923644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="11943" checksum="BAF9430AB1D4C36A" modified="2025-10-08" version="1">MHLADVAIGTCEINYCVKARAFSYKGLPPIQKPPYFELPNNAFDDGDSSVERYQVGDDRKTWIVLTPQTLNETAKNQMSSAAILTFEMKMTVVMLSLVHWVSMRGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVN1</accession>
    <name>A0ABV2AVN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">B30.2/SPRY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005081</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006496">
        <property type="protein sequence ID" value="MES1923504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd11709">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001870">
        <property type="entry name" value="B30.2/SPRY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043136">
        <property type="entry name" value="B30.2/SPRY_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003877">
        <property type="entry name" value="SPRY_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00622">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50188">
        <property type="entry name" value="B302_SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B30.2/SPRY" evidence="1">
        <location>
            <begin position="1"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14247" checksum="CB9CFC4EBC135B54" modified="2025-10-08" version="1">MEILKSGETMNSWEMIVGVVPENFDYKAQKCLGFPSGWGYISGNGSKISSFSEGENFGPKFGVDDKIGIEVDFDKDGSLSFTKNSVFVGVAYKNLEEPIRFAVSFTGRLSSVRINYIISIFQILIFFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWH5</accession>
    <name>A0ABV2AWH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007137">
        <property type="protein sequence ID" value="MES1923602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="16911" checksum="58575CC697D95435" modified="2025-10-08" version="1" fragment="single">FPYSSGVHFGEGDSNRTRDFVFSVHSLSSQKPSLRRIENTAGNSEKAFARALSDISTKTETNNEAVVCQISSRDLIAIGVKAPSSSIKKEPLYMMVDPSQSFNVKPTLNSIKSMKPICLRLERGEGMYVAKFVRSGDDAYEFSCNFRLISPST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEA8</accession>
    <name>A0ABV2AEA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA exonuclease ngl2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">NGL2</name>
        <name evidence="4" type="ORF">MHBO_000068</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CCR4/nocturin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000008">
        <property type="protein sequence ID" value="MES1918040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050410">
        <property type="entry name" value="CCR4/nocturin_mRNA_transcr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12121">
        <property type="entry name" value="CARBON CATABOLITE REPRESSOR PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12121:SF45">
        <property type="entry name" value="NOCTURNIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endonuclease/exonuclease/phosphatase" evidence="3">
        <location>
            <begin position="23"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="388" mass="45748" checksum="D1204A4205CD40B0" modified="2025-10-08" version="1">MKRPKREWLLTNKSCKDANFTLMSYNVLAQSKIKRDLIYPYCSKKSLKSRFRHKLLVDEIQSLSPDIICMQEVYKYESFWNKELGHSYNSRYVPARPHEEDSHGIAIFWKKELFSVVEKKEIFFNRMKNDYENEDQQREFGSHQVAQIVVLKSKSLDKKFAFVNTHLYWNPYYQFVRLRQIEKILDTVRAWPALKNISLFFAGDLNVTPENILYNILVERSPIDELDMTEFLTPLIHYDKPSVVITDVLDEDTKRKYQRMETERRKVLSGIDENRIKEAIEIVAKIYEFAHLKSVYGCYKQICVKNKFKALEDEDFSHLSEPNFTNYVKGFKGTLDYILIPKDQNMFCCEILSIPSLEEVSVQTALPNDALGSDHISIMARFEICSDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP4</accession>
    <name>A0ABV2AEP4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Signal peptidase complex subunit 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000161</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Enhances the enzymatic activity of SPC and facilitates the interactions between different components of the translocation site.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Endoplasmic reticulum membrane</location>
            <topology evidence="1 9">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the SPCS2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000020">
        <property type="protein sequence ID" value="MES1918151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009582">
        <property type="entry name" value="Spc2/SPCS2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13085">
        <property type="entry name" value="MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13085:SF0">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06703">
        <property type="entry name" value="SPC25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="41"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00045608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU368033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="21066" checksum="21E27AAB45AB3A94" modified="2025-10-08" version="1">MSSEGFKANLTSSASIKSTCDDYVLKWIKTKNVKISRKMENFKIFMLSCCVAMTLYAHYNKTPFPKNSYILVSAFVTYWAINLLINLCEYYYGKDNIVSARTTKATGNVSEGIKIKIDTKIEEFSIFYQICIRAFSRNERKKWLKTIRATEIYTAKGCLVEPLFEDILNDLFSRIDFGKKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEQ8</accession>
    <name>A0ABV2AEQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">WH2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000197</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="133"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="149" mass="16790" checksum="904786A23932C111" modified="2025-10-08" version="1">MRQKKMGIFVESTEQTQLDKDQTEEINTISESKISSVSLENSVVPTIPPPPPPPPQLPAPQNKLKIPLSKPSKVSNQKYSNEPNIESVLEELKKKQLLLKRKSSVKEIDSDNNLIEEKNDQIETDPKSNGMSIDERINLGKEARKSLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AET9</accession>
    <name>A0ABV2AET9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000033</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1917999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="22428" checksum="E8FC0F2329169991" modified="2025-10-08" version="1">MDTKNRFTKFIDNLNKLNAKVVVFDLDLTASKIHSFGALCRIDFDKYVESASSDFVEIVPLLIEKGFELAIATFNDEHIKKLFPLLSLNLRNNRLDGMPRDPNDIIAGEELVIAFLDHHFGEEIRSKFVIVAKNPNFYSAEKVDKEEHIKEIADKFNVNINDCVLFDDQIANVEGARFPAFLVDGEDGFKLEHFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEZ7</accession>
    <name>A0ABV2AEZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13017" checksum="B9E83C87028D8DA5" modified="2025-10-08" version="1">MSPRDFHKLVANPFDAELALSKFLLRICKLIRTKEWDGRYPMQTKNLLLDSENGVDELERATRSMVLQEKHRVEIIKNIEKSAFYGVSEEGSEEPAKIEKGLHGIARDYGKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF47</accession>
    <name>A0ABV2AF47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000302</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000041">
        <property type="protein sequence ID" value="MES1918319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10503" checksum="F8EB01400F6C8F2D" modified="2025-10-08" version="1">MHSDNYKYMDNKMYLGNYPGMQPRVAPINTNMTPRHPFSHPLDNEQFALYSPRETTTPKTIKAKKQRKRVAIACVPCNKAKTSCDGGFLVIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF82</accession>
    <name>A0ABV2AF82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Elongation Factor G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000047">
        <property type="protein sequence ID" value="MES1918351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.870">
        <property type="entry name" value="Elongation Factor G (Translational Gtpase), domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="EF-G C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Elongation Factor G" evidence="1">
        <location>
            <begin position="51"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12234" checksum="1A5D682467072A83" modified="2025-10-08" version="1">MKGPYIHKTDEVFAGNIFGFKIQENLNLNEHPIFSENLNDLQNESSTAKTRPVYKVELSTENKQNGEKLKIALKNLMLCDPSLKFSHEENGRLMLFVCGEIHLQVIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFD4</accession>
    <name>A0ABV2AFD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000366</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000055">
        <property type="protein sequence ID" value="MES1918395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046553876" evidence="1">
        <location>
            <begin position="19"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="285" mass="33280" checksum="655DED50E20A190D" modified="2025-10-08" version="1">MTANISIMFILGLATVCSHDFFKTFSNLYSYKDIFVQHEKSRVVTVLRENGFQLDLSFKNTSNVYRYNFVDSEMVCTQKNVVANSSILLLEEIEDTFSLESLPDNLKDLKDKIASTFFRFLKNDLKKIANKKTEKFGKTAKSRKKFFGYKIFNESDFSDRFTKKYVNDSTIVFATVVYRIDYSVDPVSIITFNGHSEKKVNGEIIRKRLLEKFKNVCAESAGIKICFFKSLWKDNKYYFFDDRISSTDFSISDRFSTLILKLHYLSLGSEVPRDFYFVCDEKVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE6</accession>
    <name>A0ABV2AFE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000393</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16161" checksum="25207DA4FE180648" modified="2025-10-08" version="1">MAFLPSLTSILLLKIDVFFLVLQSSAFVLFPKRFFHPKLDVDLTHINLLRFIGIYSLNFAIFLIGALRSKNDCVYMIAQTNTWRHLLALFVWIYLLFLGICSQLFFYTVILLHCLYIILSIFFVPISSGFLRNSKNKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF2</accession>
    <name>A0ABV2AFF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phospholipid metabolism protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">UPS2</name>
        <name evidence="2" type="ORF">MHBO_000392</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006797">
        <property type="entry name" value="PRELI/MSF1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037365">
        <property type="entry name" value="Slowmo/Ups"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11158">
        <property type="entry name" value="MSF1/PX19 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04707">
        <property type="entry name" value="PRELI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50904">
        <property type="entry name" value="PRELI_MSF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRELI/MSF1" evidence="1">
        <location>
            <begin position="1"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21943" checksum="7FA46738D029FB46" modified="2025-10-08" version="1">MHFFSNKHIFNYPFNVVASSFWQKYPNSHNTVISMDTFHREFDYENQRLTTYRIARTKLKGPAYLSYMLSIVGITLENTGVERSVIDLREKTLTIDSRNISGSNLLRFNERCSYKQNLGDANLTDFSHDVKIECSATPFKSYIEECSVDMIGNQAKGGLKALEKICENLSKNENSKVNNLIAEEAQKLDFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF4</accession>
    <name>A0ABV2AFF4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000348</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000050">
        <property type="protein sequence ID" value="MES1918377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045072">
        <property type="entry name" value="MKRN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11224:SF10">
        <property type="entry name" value="IP09428P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11224">
        <property type="entry name" value="MAKORIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14608">
        <property type="entry name" value="zf-CCCH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="5">
        <location>
            <begin position="43"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="5">
        <location>
            <begin position="84"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="5">
        <location>
            <begin position="115"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="43"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="84"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="115"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16024" checksum="D5EBF125074EE037" modified="2025-10-08" version="1">MSSNVCYDFRDNGECRFGDNCRFSHDETGDSGRGGGYKSDYRRSRNNVCFSYRDNGNCDRGDSCRFEHADNDGDYSGESGRYSSKRSGTCYSYRDNGSCRFGDTCRFSHEEEAGGSGRNQCRDYANGNCRYAEECKYSHDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI3</accession>
    <name>A0ABV2AFI3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">subtilisin</fullName>
            <ecNumber evidence="6">3.4.21.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000389</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.</text>
            <dbReference type="EC" id="3.4.21.62"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase S8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.62" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050131">
        <property type="entry name" value="Peptidase_S8_subtilisin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43806:SF11">
        <property type="entry name" value="CEREVISIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43806">
        <property type="entry name" value="PEPTIDASE S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase S8/S53" evidence="8">
        <location>
            <begin position="32"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="16836" checksum="C86EE72D14DE8E62" modified="2025-10-08" version="1">MVTIKKQKSFSYIPIGVWLTGSTLMWSQGFTGNGCVVGVIDSGIDSSHSDIKNNVKKRISYVGDENYEDLHFHGTHVAGTIGANGKLKGVAPNATIYDYRVFDGKGFSRPFAIERAIRKAADDGCNIINMSLGGFKEYPELVLYFPVYIYAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM6</accession>
    <name>A0ABV2AFM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000448</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5598" checksum="D7611F8C88694A89" modified="2025-10-08" version="1">MSLKNLGGEESDEADKGSDIEASGSEYYSEYEYEEEPAEETTEAGKGWLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR8</accession>
    <name>A0ABV2AFR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000476</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046828865" evidence="1">
        <location>
            <begin position="17"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10928" checksum="AD1C8B4D574A2373" modified="2025-10-08" version="1">MFLLLMSIIAISRLNSFDKILVSTEPPHFDFFEIQSTYSRIGFPRMPSLNSDLLFKIYDAHFLRKSEASESLLRLVKQKMTEVKRQESLAGMIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS9</accession>
    <name>A0ABV2AFS9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Exosome RNA helicase MTR4</fullName>
            <ecNumber evidence="6">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SKIV2L2</name>
        <name evidence="6" type="ORF">MHBO_000499</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000080">
        <property type="protein sequence ID" value="MES1918544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050699">
        <property type="entry name" value="RNA-DNA_Helicase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131">
        <property type="entry name" value="ATP-DEPENDENT RNA AND DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131:SF7">
        <property type="entry name" value="EXOSOME RNA HELICASE MTR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="5">
        <location>
            <begin position="134"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23173" checksum="D5C2F3C768481F12" modified="2025-10-08" version="1">MDPVLEETLFGEEDVIVPDTEVDVEETTAKSAGYLDYIKKNPDKKHLDASDRSVFVDAIYRNIGPTFKKDDENFGTFTPQTIDRLQAENCLHDICYPPNCDLPNVREKLSTPLPPREPAKTYSFELDSFQKRAINCVERNHNVLISAHTSAGKTTVAEYAVAKSIREGTRVIYTSPIKALSNQKYRDLYEEFTDVGLMTGFQAKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT8</accession>
    <name>A0ABV2AFT8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000509</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000083">
        <property type="protein sequence ID" value="MES1918555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045924636" evidence="3">
        <location>
            <begin position="19"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="223"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="328"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="41384" checksum="BA4AC828F183EF30" modified="2025-10-08" version="1">MGKIIIVQIAILFLITKSKKVQYEFFGATKNFAQLFNAEKRVQIEKLTIFVHVPKFTIGCGQVSCLSTIRLYKVAAENKISSTLFEEDFNLNMTEIRPFLTIDFPEKIVLSKGIDYAWMISKEPKLPLFFGRKEGETENIKISANLVNNMNDENSWTALEGNFAFEMKTAYLDKMDFGDDALLSDEFWEKSAEYRWEENSFYGEKEIRIARKPRTVIPKYKNLYLGLAVGALGMFLLILLFVIYKVWKFWDLKKLDKLVEEEKKFFQMKRFILGETNEEKLRRRRMRSEKREKDRERWRKSGLKEHYLENDLLNKTFIRVINIEQSVESRRDAQKEQIEKGTQFEKNQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG03</accession>
    <name>A0ABV2AG03_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000563</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000096">
        <property type="protein sequence ID" value="MES1918620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="86"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="26305" checksum="E1FF7B768B3050A5" modified="2025-10-08" version="1" fragment="single">MTERQISFVEKNAQKQRTLKIEIADEIKQTKIKIEQSKKLQKEITEKYTKCDDDVNSIRKTVFSVFCLKTGIEDVKQFEEKTNAHLEMTAQKRMSLIENISRAQEKLAFEKSVSESLKDEISEIENKTKISERKINSLKLKLEHFEDEINRKNKEILNIKNKMKKLESEKRKVKDQIFSIEETVIKVADEVKQNLRNRAERDLEKERLSALEQDLIVTADMEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG67</accession>
    <name>A0ABV2AG67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000609</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000105">
        <property type="protein sequence ID" value="MES1918679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="56"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="211"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="65"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="81"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="99"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="337" mass="39847" checksum="677E198247622E78" modified="2025-10-08" version="1" fragment="single">MLRSNSDKFSYWDDELTTDLNISSPELVENNENGYSFECSSSEPYFNSLASFKSNTKLSKRTKNKEKSSKRNNNIERSSKRNNNIGRSSKRNNNIGRSSKRDNNIERSSKRDNNIERSSKRDKNKKENKQYLKKATNYLTKLFDIKRSNKKNYKNLTREKVDKHSKNNKILSKLSKILLSAKDNSDLDKIEDFLNNFRSKRDKSKISLKSAKSLEIMVKKLKLENKNLANKFDQLVKKANDLEKQCRKYHFERENLKRENLNLLLKINKNSKKCVKIDENFETKHQSNGITENTETTKVANNNKNKDFFKDKNDRKGNDSLQKKQIWYRQQIEKWIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG82</accession>
    <name>A0ABV2AG82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RPEL repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000107">
        <property type="protein sequence ID" value="MES1918693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="77"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="104" mass="11780" checksum="785B5676DFAE4356" modified="2025-10-08" version="1">MEDGPSYERAANIRPSLERRDTIPSSNYAVLDRELVLEQINRTGRAGIDENDPIDPTKVGSDPAKETRKQALYSQVEKTRKRETNPETSSDTKSEDSQKREDLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG93</accession>
    <name>A0ABV2AG93_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">hydroxyacylglutathione hydrolase</fullName>
            <ecNumber evidence="5">3.1.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Glyoxalase II</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">GLO2</name>
        <name evidence="11" type="ORF">MHBO_000631</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>an S-(2-hydroxyacyl)glutathione + H2O = a 2-hydroxy carboxylate + glutathione + H(+)</text>
            <dbReference type="Rhea" id="RHEA:21864"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58896"/>
            <dbReference type="ChEBI" id="CHEBI:71261"/>
            <dbReference type="EC" id="3.1.2.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Secondary metabolite metabolism; methylglyoxal degradation; (R)-lactate from methylglyoxal: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.6" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000110">
        <property type="protein sequence ID" value="MES1918709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004416">
        <property type="term" value="F:hydroxyacylglutathione hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07723">
        <property type="entry name" value="hydroxyacylglutathione_hydrolase_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="entry name" value="Ribonuclease Z/Hydroxyacylglutathione hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035680">
        <property type="entry name" value="Clx_II_MBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032282">
        <property type="entry name" value="HAGH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11935">
        <property type="entry name" value="BETA LACTAMASE DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11935:SF94">
        <property type="entry name" value="TENZING NORGAY, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16123">
        <property type="entry name" value="HAGH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Metallo-beta-lactamase" evidence="10">
        <location>
            <begin position="3"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23162" checksum="910833847F6CE7D1" modified="2025-10-08" version="1">MTLTTHGHDDHTAGNTMMLEDYPKMKIFGCAQDNIPGLTDEVVDGSEIKLRELTIKAIHVPCHTRGSICYYLTSSREDKKAVFTGDTLFLAGCGKFFEGGPSDMVAAMDKLKRLPDDTAVHSGHEYAYENLMFATRIAEQVNSEAKIKLSAAISLMKTGILESTIKEEKRYNPFMRADKRTVLPHLENRSAIFIMNKLRWLKNMAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGC5</accession>
    <name>A0ABV2AGC5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CB1 cannabinoid receptor-interacting protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000411</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="106" mass="12388" checksum="8295084964CEA067" modified="2025-10-08" version="1">MDNGHNKMKVKNLWQNGQNFEFEIEVVQKSTENILLAKGGGKYKPGNSPKFQKTVNLDKCLDDETKSLVVKTTLYRKGYSKNVNDENYDEALIVKNFEMVKFRFRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGE5</accession>
    <name>A0ABV2AGE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000668</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000118">
        <property type="protein sequence ID" value="MES1918754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="18221" checksum="555C570D50CD618B" modified="2025-10-08" version="1" fragment="single">LNPEGANYQNFDKNLKFDQNVKNEFKFGQNVKKELKFDQNVKNEFKFDQNVKNEFKFDQNVKNELKFDQNNQKTEKTFLKTVYQRNEEFNENYGKIPKGLLKMVPRSVIFKTKNSKTKQSNQSKRLNLAPNVTNNEDDYQNLMKDINRMTKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN3</accession>
    <name>A0ABV2AGN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000741</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000137">
        <property type="protein sequence ID" value="MES1918843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="753"/>
            <end position="770"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="782"/>
            <end position="804"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="844"/>
            <end position="865"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="887" mass="103801" checksum="3847C9673CAE4101" modified="2025-10-08" version="1">MDNIQNLIRFVHKTEIYQSESLASDINQAAWLLLEKKMSPGKLLERRDELVEEVSRGFYSMWGKKTYKSSSDLFLNEITDMIRHYRSCHEISILLAKALELFVNKGAFENSVEVTFIFSKMHSVYYEHHFWFLRKFTHDLEALLGSKIVFDVTESSRHSILDLKLKLRIHNLSEDKIKRSLLELGITEEVDNENAFDKAAGDFFFPLSWFNNDQNLILRVMSSYDDDETRRRLNKAFTDEGSSCVVGRKDKTNHVYTFTVKDATAEVLNGLLSHSKMHFVVLDFRKYSLSDENEILSKLNSIKTLLLADDPDYRKILKKLLEELLQWSDLTVNIDDADKHDIKSVMKWVITTLLVLTKQLEPKHKFSFLSHHNKARDAIFDKKEKTSQDTHSIYLEQLKCTQEKEGLHHISQNKTYRRNSALVTNSSQTQDKMNHPFKSALELTELCIGNNVDSVLYEDLCMHIFVAVIWGDELHVYRKTIRDFEGKQVPNDATIYTISIFGMHHQYKDFDFQPFLCAKIGTDEIRVIALEKKSAGLFKKSIYVAKVAVRAEQNRFEQFLKRHYSTFLDKLENVYVEKIPPIPNIRKGKQSKKLQKYVKENSRPISFLKRASIALDWRTEIDYSMDSWFAQEFQRLRFVEGVQNEEMQQLFDSGDNKKIVELIVNRYGDATVKSEELLETRDLEKFLIEAMVTCVENGFKDHEAPFLKLFLLYRHHFPDACRKENTDKNTHTYESNAVAVQTFSVKLESKLKMCWVSFLNLFFWIAIFYWTSTIMAVGIQWQSLYCCLFGLSLIPASALLNQFLNQMGIKKKIKSMSYVMSYEDKCYLNKLGSKKIKSQYWKHLVQNYIIAMMIILFYGIVSHYLPFKYIIFLSRLPRNLLNGDGLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH67</accession>
    <name>A0ABV2AH67_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Lactate/malate dehydrogenase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000698</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000127">
        <property type="protein sequence ID" value="MES1918794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="entry name" value="Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010945">
        <property type="entry name" value="Malate_DH_type2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23382">
        <property type="entry name" value="MALATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="LDH C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactate/malate dehydrogenase C-terminal" evidence="2">
        <location>
            <begin position="2"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7297" checksum="BAE04E81E84352ED" modified="2025-10-08" version="1">MCVCSDGNPYGIDSELIFSFPVTVKNGEWTIKEGHEFSPEMKEAIKKTEEELISERNKAKEFAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM9</accession>
    <name>A0ABV2AHM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001066</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000225">
        <property type="protein sequence ID" value="MES1919203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="22132" checksum="0190FFE94FB092AC" modified="2025-10-08" version="1">MSDQNPKKRCNDCPPGLTERFTNFVCNLPMFNNVCDRLRNKMEKTETKPIDSQKKFWDDNQEDTFNHLKFLAKMNERQIEKAFQSIDRLAETPKTRKTDDFGPKRTVDSFRAKESKIVSNDEADFRMNEETRTINGKTFHRKIVIENGKIITNESNFPDETDSSQNLDFFHHFNESFNDLLKRFFGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ5</accession>
    <name>A0ABV2AHQ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Trafficking protein particle complex subunit 13 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000153">
        <property type="protein sequence ID" value="MES1918908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055428">
        <property type="entry name" value="TRAPPC13_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23643">
        <property type="entry name" value="TRAPPC13_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Trafficking protein particle complex subunit 13 C-terminal" evidence="1">
        <location>
            <begin position="164"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF23643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="30367" checksum="78F120BFBF0716FA" modified="2025-10-08" version="1">MKNQSADSEGLFFKKRGNFVLNFIDPLKCQIDYIAKPLKIAENDDISSSNKRTVVVKVTMTNLTKSDLFLMESKFVLNQNSKTAKIFKSESKEIAFEGGRQILSKDNIVESFPLEISATGFVGYIAVVLKRNESSENSVEKRFDLKVSLEKMEVVLDLDFMNVAVTEKPFEVVLSIWNRSADSKEYKISFSDFQSVFLISGITEWVVTLKSGEFGKKRYTVIALKSGIQQLPDIMITDQQTRKTLDCSKINGKKVLCVSDQTFLMEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT6</accession>
    <name>A0ABV2AHT6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="6">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">DBP4_2</name>
        <name evidence="9" type="ORF">MHBO_001109</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="6">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000239">
        <property type="protein sequence ID" value="MES1919249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025313">
        <property type="entry name" value="SPB4-like_CTE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13959">
        <property type="entry name" value="CTE_SPB4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01178">
        <property type="entry name" value="DUF4217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="8">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="202"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25533" checksum="BEFB78CABC8C671E" modified="2025-10-08" version="1">MKGALITTDMCSRGLDIKGINWVINFDCPDGVKSYIHRVGRTARYKSDGFALLFLLPPEIKMVSIIKEAKIPIVKVKTKFASEQILEKRFASFLAEDEALKYLAQKAVVCYIRSLTKTKNGRQILDKIDFEKMCKSMGLPNAPSVSFKRKKVFSNEMESSLKRLLEDNNSNAELNLDDDTKQNVGRSKIERLLKRENKTVYSKEKNDLRKDSEDDSDFFSASAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI21</accession>
    <name>A0ABV2AI21_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000787</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000150">
        <property type="protein sequence ID" value="MES1918892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.60.10">
        <property type="entry name" value="Zinc finger, CCHC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00343">
        <property type="entry name" value="ZnF_C2HC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="3">
        <location>
            <begin position="345"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="107"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="8"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="482" mass="55761" checksum="2677249F80442763" modified="2025-10-08" version="1">MESEEKQNNSMDCNNEDNCPTENQTDPPLRFFGDLREDILDIQAHIRDFGDITEKQYSNSSSINKKTGKRLTTSENTINRLTKIEPIKCSEKPELRKKIISKSLNKLEVKPETRNRSGKYTSNSKTNRKPANKMSDDLLISNTSNGARSTSSRTDAAAIFIEEDRKTKRIRETKLNEKQTCLLIQGIGNPLECKNPIYLESKIKGIIPKCKKAKLLRFGDIKVWMESEQDRNLALDNSLRNSDIITSNFGEYAKVLPWRNTEEMSVLHRIPSNMEDKQIENFMSEKKQKVTILKRIENSNKQWLTLFVRFSDEAVRKRLTDRGYVRIGFSKFRISKYERRVPPICFNCQKYGHVAKVCFAKSKCRNCAESHSSRDCPNEDTKKCINCKGKHKSGDKNCIKRKKYINRFQALAEETVFESNESEDKNTNNIFGWTPTKRNLTKKEKLMTMLTWPSKSKSNFNATLSTKNVKNTGKKLKEIKLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI48</accession>
    <name>A0ABV2AI48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Poly(A)-binding protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">PABP3</name>
        <name evidence="4" type="ORF">MHBO_001193</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000261">
        <property type="protein sequence ID" value="MES1919345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15241:SF304">
        <property type="entry name" value="RRM DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15241">
        <property type="entry name" value="TRANSFORMER-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="219"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="298"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="384"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="132"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="471"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="664"/>
            <end position="750"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="134"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="471"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="491"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="506"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="664"/>
            <end position="686"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="691"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="719"/>
            <end position="746"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="765" mass="89606" checksum="77CC4AF7E87DCE9A" modified="2025-10-08" version="1">MDNLIKKVLKLNNRYVNDICKKIRFCEDPTLLATDDFWQFLVDEDIPYLIPFLKEHSKNLFESMRKNLSVESGDSAYQDDYSFLLESILDGTDSASRVIKPLLSEAGTELSTELVNQDSDLNLFDNIDQIESQKQQEDFKTEEKTNQKNDEKAEEKSGEKVEEKSDEKIQEKSDEKETDLDKSEKIEENKIEISNNIDPISLENGKIIAELNSKLTPLNTAFVSKLEFSITNDELKENFKDCGQIISSRVIYDRNKKSKGFGFVNFQTREGLKKAISKEGTDIKGLNIRVSESEHAGTKVFLGNVETNAKYRDLLRFLLEKSSMLATLCIKSGYAFLVFENLSAANKAVATLNDSEFMERKLNAEISKKSHVTEEDRMVVKPSRTLYLRNIPEEIKLEDLKKIFEKYGKIRDSYLSYPKERQQRSYRTSFAFITFENLEEAINAHNCEMDRQIKKNTLRIEFSSDRTNRSLHLRNNYRNHSRNYRNRSLSRSRSPPRSSLRYHSSRHSDYHRNREDSPKRYRNRDDPYRNKDLPQRGHRNRDERYEDRSNFRDERDLYDDRYRRNTLQQRQQRSSDAIYRSGNNNQFYDSNNKIFGRPEFPPVDSNNSKAQISYFNNGGNRNFGGNDYAGNKGYNNMNAFGNKGYNNMNAFGHKEQDGHMRSYGNNNKNTFAPLNVPPNKQYNTENYGRPDWNKDADKFERRDSGDFGRNDYVPGQKRQWSDRNENEWNKMQKKEWRNEDFGNGEDKGEEEGMQYYVDMMGNGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI77</accession>
    <name>A0ABV2AI77_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Calcium-dependent protein kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001211</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000267">
        <property type="protein sequence ID" value="MES1919365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050205">
        <property type="entry name" value="CDPK_Ser/Thr_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24349">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="1"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="10">
        <location>
            <begin position="233"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="10">
        <location>
            <begin position="269"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="333" mass="38705" checksum="DFFB401F3E66567D" modified="2025-10-08" version="1">MELCEGGELFDRILAKGSYSEKDAAFVLKQAVEGINYLHNQKIAHLDLKPDNFLFVNKDEKSKLKIIDFGMSSVVEKHKYLKKLVGTPYYVAPEVLRGQYTESCDIWSVGIIMFVLLYGYPPFYSDPNNHNSEQKIFEQIKKGFNPIVKDDYGPWFPKSVHCSDSAKNLISKLLDKDPVKRITAKEALEHSWFSTADDRMVESSVVSKIISFRNTCKLKNAFLNFMVNSLDEDEMKDLTDEFEQIDTNKNGRISFAELKSVLKRNNCEIAEEKISDIMKHMDEDNDGSISVNEWCMVAMNKRLLEKEERLMQFLSQHKKFIQKNRRKRRRKVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI95</accession>
    <name>A0ABV2AI95_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CDC16 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cdc16</name>
        <name evidence="3" type="ORF">MHBO_001222</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000272">
        <property type="protein sequence ID" value="MES1919378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.80">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000195">
        <property type="entry name" value="Rab-GAP-TBC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035969">
        <property type="entry name" value="Rab-GAP_TBC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00566">
        <property type="entry name" value="RabGAP-TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47923">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50086">
        <property type="entry name" value="TBC_RABGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Rab-GAP TBC" evidence="2">
        <location>
            <begin position="1"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="28045" checksum="3AE3BA388664A13E" modified="2025-10-08" version="1">MLDKGIHKKYGRIIKSDSKRYSFIEGTPVRRLWRNFLALCNYMDENNKNFVYCQEYHSFAVYFVNVMPEIDSFYCIIKILTKILPAYFNPKTTALEIGGNVFFNFFFNFSKFFVKLVMESIELLDPALDKHMKSIGFQINFCCMSMLKTLTLLIYNMKSSLRLLDLILVAGPPVIIISLIAKIISKRNCILEFNNSGECFALFQQMKYSEEIDEDGMAHIYFALREEKKLYKKILDLHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII8</accession>
    <name>A0ABV2AII8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001271</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000290">
        <property type="protein sequence ID" value="MES1919437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="219"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="332" mass="38554" checksum="C3F0EB9BD15B6EB6" modified="2025-10-08" version="1" fragment="single">NIFYVNSTESENGENVRIVAEFAGMSWSINAKFVDPNKITSFTQKLFKKSKTRLRAPNKRRIHNSLKSPMEHISTVRTNNRYFTREKSATNLLKLIEKKFYNFSTRKLSKKQIHKKLLSLIKNNQIVNLRIIYELTKSLPKAKRILDDFFQKNKSKFVSFHVEDNLLLEYLGRIKKQSSYQEKLEKLGVDKEKAEKLVNLHLDRTREILAEPKKSENFAVPSKRKIAPPPRKLIPPPPPPIPKSEELRQNLEKEINLKESNLEIALKPVTVNLAGKKKFVSEINSRKIRKIKKKECLNCKAKMHIAKKICKNCGADMVRKKVAHLSSFINPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK5</accession>
    <name>A0ABV2AIK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001133</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000243">
        <property type="protein sequence ID" value="MES1919274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10345" checksum="C735E736C85D3F66" modified="2025-10-08" version="1">MQIFFDKRLWTDQGLFGEDYVLTIVIAATTSVQLIITSLTYFVSANKNAVLLWWPLIDDIRVVVIRLWRLLWLYDKEKRIRPATLFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN2</accession>
    <name>A0ABV2AIN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001159</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000251">
        <property type="protein sequence ID" value="MES1919304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13343" checksum="4D71C49C5CB2522F" modified="2025-10-08" version="1">MNIYSSQYKVFGKAKRESDKIVIKMVILNASNMLPPDNAFKEKFKLIDKRTGNPIRSEAIEVALGKNSNKPKFFRFELPGNNLKTKPVAVLFNPGKAVMLLNLPVNSEVVKKYFTVPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIS6</accession>
    <name>A0ABV2AIS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001342</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NELF-D family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000316">
        <property type="protein sequence ID" value="MES1919527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006942">
        <property type="entry name" value="TH1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12144:SF0">
        <property type="entry name" value="NEGATIVE ELONGATION FACTOR C_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12144">
        <property type="entry name" value="NEGATIVE ELONGATION FACTOR D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04858">
        <property type="entry name" value="TH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0678">Repressor</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="551" mass="64944" checksum="31411AE392DC68BF" modified="2025-10-08" version="1">MSEKNKKQKKNPERALKKSEKINSSTTINHFFEILVLTGMKKEEIEKIAEDLLFEEIVSNFKNEAIEKNLSKFEEVPEWIDIFLLNTFGRKAIYQLKTKYDNFFLQYCVKKLEFFGFDENNYLLNVDLSIIKDVNKISNYVETFAKFLSKKKFCFGMDLEEFSKFCKNNFKITKFVDTACFNQNVFSLMQQEILILHNGENGQNILRFGNLLTEYFIKINNFRQCYSLIFPKFFENMEKETKTIQKITKMAFSNDKKNFTENDIENLSLAENKICPCYIFGNIEILSLFAKIILSITRNQQKMSKKSIEKLLKIYCCYCCANDDYFKNDIKFVVKRNLKEEKRLFDFLINFKKIFDSKDFLINFDQNKFIIERMDDNFGTALILFVVAENCLTDRNFYNTSYHSNISLLFLKKLENFALKNDKIRRKLIKLATKIFSIEFPTNFGAVQIIDHHKKLLKTLSKMCIFEYQKVFNFLISAVSKIDYALIRKFTVELIKSTSAPYSKGFLRLFALFLANKTVIDSISAEKESAHVFKVTLFITKRSSIRLLSLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK4</accession>
    <name>A0ABV2AJK4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001601</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000418">
        <property type="protein sequence ID" value="MES1919845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045532176" evidence="1">
        <location>
            <begin position="19"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="23691" checksum="154611D63898D895" modified="2025-10-08" version="1">MSKLIILIVLVFTLPSFSLQLRGELDCTVKMKSDLDYFTKNGKEITQNPFSLKNNDFVIAKCKENSTSIRIKYFLGSNLMLFCLENRFVFFYNKKRYLFDVFANPKNCYDPKNEDVSKLPKIKFRLLDRTDLLRAITHYYNDIQLYLEEDSSYRNNNPEYYDLDKTFSSTRYNDLNLEFEKLNEYLANSKLRHLFFGGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU0</accession>
    <name>A0ABV2AJU0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Rho GTPase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001687</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000453">
        <property type="protein sequence ID" value="MES1919945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00157">
        <property type="entry name" value="Rho"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003578">
        <property type="entry name" value="Small_GTPase_Rho"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24072">
        <property type="entry name" value="RHO FAMILY GTPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51420">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="196" mass="21966" checksum="8B4CFA29E2157E6F" modified="2025-10-08" version="1">MAEESVKCVVVGDGAVGKTCLLHSYSNNKFPEEYVPTVFDNYSTNVMCQKKVIDLNLLDTAGQDDYDILRPLSYTQTDIFLLCFDIGGYNSFLNIEQKWYLEIKKHNPNTPFILVGTKSDLRNNPYTKDGNKIEVIDYSKGEELAKKIGAVSYIETSAINLDNVKYLFDSSIIAALKSKSNPKVEVAEKSVCCSIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ7</accession>
    <name>A0ABV2AJZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001559</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000402">
        <property type="protein sequence ID" value="MES1919794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="667"/>
            <end position="701"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="746" mass="86180" checksum="1525D89A2354CBD4" modified="2025-10-08" version="1">MEVQTEVKKCLEIINTAKSLQKISETLEKLVSLSSSNPNFTLETNEIEYLLNFYNLETNDFVLNFIFRLTKFLINYLKSDKNLQKLSDHFFSKGQIVNNVLRFLNIKNLNSQIAFLVFSVTKTNPKKAQKFFVQYKNFPFFSYLLSDKIASDMKMHILCISAILSNDNPEMQNIFKRNKTFLDFLFENIFVQFSDVDTINSNIFAPSLITFQHSFFGNDSLTDIETAKILFKAFKTQTHFANINKANLSLRINFIFSFAEYLKNQLERDGRKIIKCFEEDSRFLQAVLRDLLTATSKLSILRKSEADESVAELTEKCTVNVLIGISDIVNNSQSAKRLLATTKFTAINYLANLRKKEIELKKAENEETMNGNPQTTETSSIVYLMCTALYESESLSPYFENVLTAFFSQNKMGQKLSSMTFVSPFETIDKDTISFGDIILHHLKKYHDDKTNTFRLNILLRMLSNILLGNLETKEKFLNIRINFDQKSVTFLPRLIASLFVKTTDESVRNNALFLLSVWLADYSKTARVVFKTPLKFLPKFVENYDKSPLNLSFFFFLLLKYCPELELPPNAICDPLKADTGKFLVYSLITDLIGTQNLHKNLIDLINLNSALDEKSIFHKMQKSFCEKETESFEKTMETYLNSQKAAFEMKKDYKKIAKNGKTDQIKNFVLALNEQRSRIKSLEEQNKVLTEENIKLRVEIKLNLQNKDRSDGSKSNEDLFVLVGEQDETIKKLKSEILLLKKGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD2</accession>
    <name>A0ABV2AKD2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001499</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the 60S subunit of the ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 60S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the ubiquitin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000378">
        <property type="protein sequence ID" value="MES1919717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1060.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001975">
        <property type="entry name" value="Ribosomal_eL40_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038587">
        <property type="entry name" value="Ribosomal_eL40_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01020">
        <property type="entry name" value="Ribosomal_L40e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01377">
        <property type="entry name" value="Ribosomal_L40e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="Zn-binding ribosomal proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="8">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="111"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00035124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15110" checksum="E17344250EFBBFC9" modified="2025-10-08" version="1">MQLFFNNINGQSIALPVSPFEKLHSVKNRLSKIISVPVSQMLLSSRSSLFEENSTLLENNLADGNSLDISLRLRGGAIEPNLIVLAEKYNVNKMVCRKCYARLPPRATNCRKKKCGHSNKLRPKKKMVISNKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG1</accession>
    <name>A0ABV2AKG1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001828</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000516">
        <property type="protein sequence ID" value="MES1920112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="78"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="135" mass="15900" checksum="18B1DB4A2C0E5E93" modified="2025-10-08" version="1">MFGLFPKKFFNLKTGYYKKIQIFGDCQPLLKKFGLDHMAPLFVTGIKHGPKFTQINKSLFELSFIGNKKSEDSVLCELKDIETLLQRINEENDMQQMDRYKKEYQKLSKSELLSKAAKLKLELEKARIKNWDNEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKJ9</accession>
    <name>A0ABV2AKJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AMP deaminase 2</fullName>
            <ecNumber evidence="2">3.5.4.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">AMPD2</name>
        <name evidence="2" type="ORF">MHBO_001901</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000551">
        <property type="protein sequence ID" value="MES1920208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003876">
        <property type="term" value="F:AMP deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006329">
        <property type="entry name" value="AMPD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11359">
        <property type="entry name" value="AMP DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11359:SF0">
        <property type="entry name" value="AMP DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19326">
        <property type="entry name" value="AMP_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="Metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="28625" checksum="3C201CEBBD1D7642" modified="2025-10-08" version="1">MDESYKLDRYPSQNILTESPTFQKVKITNKSKKSHEAKIVCDMIKNMLSIREKYQKDMQTQIPKYSLEEIADTKNLNSPPRLDTELSLKDGVYHVRTRNEDGDEEEREVISRDEFFGDLADLMKLVSKGAAKSLAYNRLKILCARFDLHVILNDMSETEEVKMFPHKDFYNIIKVDNHVHHSACMNQKQFLRFVKRKVRTESSVIVTKNEDGKEMSLGEVAKSLGISQYNLSIDYLDMHVFAKETF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP7</accession>
    <name>A0ABV2AKP7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Tyrosine-protein kinase ephrin type A/B receptor-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001902</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000551">
        <property type="protein sequence ID" value="MES1920210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009030">
        <property type="entry name" value="Growth_fac_rcpt_cys_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57184">
        <property type="entry name" value="Growth factor receptor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="266" mass="30933" checksum="5AB0A36CFDC5DB47" modified="2025-10-08" version="1">MNYRKCPDLVENCPNGFYPIVNGSYCGKCKENESYNSITMDCLVCPNYSAPNEEKTECQCVKGYVMNKDKTQCVKINQYGLAWWVYLIIVICTLMFLSGLVFIYIKVNKSQLDDLDEDFDIFSGFEDIKDPLDSDNKELNLEGNSDAEINSMNENDIFNNDNFSKELEDDEKLDKDILRNIFGRETEIVSMLRDKNKRISNENLPIMKNGDIAEKKIKQNKTRTDIVNEDTKTNTSKQQMFIDEEMDEEMFEIVDIENFEAEDIEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR1</accession>
    <name>A0ABV2AKR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001943</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000570">
        <property type="protein sequence ID" value="MES1920252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046042969" evidence="1">
        <location>
            <begin position="22"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="334" mass="38548" checksum="065844D9535646F6" modified="2025-10-08" version="1" fragment="single">MKMIPLLISFFLLLTKRKTNSCNVTNAYFCLSTRFYNGDSQQTELIDRVKKYFEENSENFVDFMNNQSQTRLTANKCMRDSILKYKNNQMNRLDVIFYFYEDVDIEIVKNSVENGFVPLTMVQYGPIKSPEEYKEILCIQCEPLLIENSENGLLQNVQVDTAIDIKCRSNFLLYDFDEPLTCEYDQFDIEKGKWSNIPFCVNSFNKTPPLKEKCSPLTIENSSNAFNLDYYTVGYGLIVECVNGYEPSLKPKDNRFPIVTECVIEITNMKPGEPTWKNVVACEKSDVLKCGIFEIPHSNFASVVVHYEIETILTVICDEEYELSDANLMSIKCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT7</accession>
    <name>A0ABV2AKT7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001946</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000572">
        <property type="protein sequence ID" value="MES1920255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="315" mass="37807" checksum="A7DA65BF96A80B1D" modified="2025-10-08" version="1">MSFFDFRTPTEKFDAALIDLYDLQYHEGMNLLELKEIGRTSGFGSKKSTTRSASYKLILKLDRKDRDLPSWNNKEVESVQIDVEHQDDVASRAFNFEENERFFKDDKDLDDARTKVTSMIRRILLSEDMYDIEYNRHIIDVYCFFYVVFDDEIETYNMLMKFLRDFYGILLLNRQTYKTNYHVSILKNVLRQVDSSLLAFLENNFDNFEFFDDYLLKLPGKTLEQMMRRFDFVVSTDFNVAYYILAVKLRKHKEMIMDNTMDLVYSMNHALDEAEDVELWEVAWNEFKNHNGDKTTESMMPFRKQDDVSIKYNFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL96</accession>
    <name>A0ABV2AL96_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Ubiquitin-like protease family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002116</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C48 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000677">
        <property type="protein sequence ID" value="MES1920448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.130">
        <property type="entry name" value="Ubiquitin-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003653">
        <property type="entry name" value="Peptidase_C48_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001876">
        <property type="entry name" value="Znf_RanBP2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47764:SF2">
        <property type="entry name" value="UBIQUITIN-LIKE PROTEASE FAMILY PROFILE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47764">
        <property type="entry name" value="UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02902">
        <property type="entry name" value="Peptidase_C48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50600">
        <property type="entry name" value="ULP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01358">
        <property type="entry name" value="ZF_RANBP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50199">
        <property type="entry name" value="ZF_RANBP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Ubiquitin-like protease family profile" evidence="9">
        <location>
            <begin position="50"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="RanBP2-type" evidence="8">
        <location>
            <begin position="384"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="439" mass="51244" checksum="BC229B2D5F61DC68" modified="2025-10-08" version="1">MKSKTISKPEGSCAAEPVLLDDVDFSQNLPNDDPFSKELLQYPPGKNATTVITKGDLVRLAPDCYLNDSLIDFYCSFIFEKISNEKSKILVFSSFFYQHLKILAESFNDMNKSKENWSKKAKILEKSHLIIPINEDYHWSLLIVSNFDKAVSAALNNSSETSKIATIFHLDSFKGSHDRKYICEILREYLSCLLKNNSKKEIDSNFRFDEKNFPDKNIKVPQQKNFCDCGLYLLNFVSLYINSIFETGNNVTRNVKFDKKEIDQMRQKIYYLILELAGKKAMSYEKFGEKYKNYFNENIEINDFRQNSSKKIRLKIKEIGDIDQIRDAILTKKSNLKKSESLKDFMFNLIVTKKESTKNRYNLTLNYEQAEKIGALKKIIKFFKQKLWKCQKCGRSNSFRNRFCQQCDVEKTNLKDIIAKLKTKNDYSLEKALLLFFGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG4</accession>
    <name>A0ABV2ALG4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002166</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000707">
        <property type="protein sequence ID" value="MES1920500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007246">
        <property type="entry name" value="Gaa1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13304">
        <property type="entry name" value="GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13304:SF0">
        <property type="entry name" value="GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04114">
        <property type="entry name" value="Gaa1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14842" checksum="161EC9BB86FF5B2C" modified="2025-10-08" version="1" fragment="single">KSSTSEFIKKAFTYLNLQITEIKIDKSKIIHGLLRAPKSDQKESILIVFKYDENKSKCVSEITFSASSLILNLIQHISRQKWMSKDLLFVAIPKLNSVKEETILTRKWINKYYSKTNLTEQSSIFYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY8</accession>
    <name>A0ABV2ALY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CID domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002342</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000812">
        <property type="protein sequence ID" value="MES1920700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="335" mass="39498" checksum="B6274B273819BDDD" modified="2025-10-08" version="1">MKNNKNSLKTTLKCITAILDLCKQKNKKICLSETDKIIKTLIKIEKVENSQKIKIFHKIFQLSNDIAKHKICFEKHFAKFFENGNANDKKLAILAVTKFAEKGNFANLPFSPNFAIFFKNFLLFEDFKEKLKFFICKIGNSDNFDFALKQILENGFIPKKQFFEIENLFDETDFRLPDVFKLDLTKFDFVLKENLRSNSFDDDFCGNSDEILDVKDCGNSKKIDDFGEYFSGNKDDLDISFDENGDSLFNRNKEKNGKKSLDKKEQIIYCKNNNDFDDNDHKEIIKNLDKKRDKINFEDIKEKICKENFTINEEEENFKKKFDQIREKMKNRSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM62</accession>
    <name>A0ABV2AM62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000821">
        <property type="protein sequence ID" value="MES1920720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="29670" checksum="BB0FBD814AFD2659" modified="2025-10-08" version="1" fragment="single">TNIQFIEKDKHGYISCRQSFKKIKNPFVDSDNETVDEFYYLINIKCSNGQIINTENDRVLKPISSLNCFDSSCNGRNRDLLIKDKFGNIFYEHFWEQETFFITCKDENKLLKNPFDELLRLNFRNITVTCQNGNFVNFDSKIMRKIEELECIPRFPLFSILNDNYCNANKLPAPMMISEDYLENNLEVIAFCFNSKVKSYRHRIKCKEGVWEYKNVTITVKLAELLCNHEMFEFRNRRDKRFVGCFYFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR1</accession>
    <name>A0ABV2AMR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002434</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Mitochondrial ribosome (mitoribosome) assembly factor. Binds at the interface of the head and body domains of the mitochondrial small ribosomal subunit (mt-SSU), occluding the mRNA channel and preventing compaction of the head domain towards the body. Probable inactive methyltransferase: retains the characteristic folding and ability to bind S-adenosyl-L-methionine, but it probably lost its methyltransferase activity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000870">
        <property type="protein sequence ID" value="MES1920799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052571">
        <property type="entry name" value="Mt_RNA_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015324">
        <property type="entry name" value="Ribosomal_Rsm22-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13184">
        <property type="entry name" value="37S RIBOSOMAL PROTEIN S22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13184:SF5">
        <property type="entry name" value="METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09243">
        <property type="entry name" value="Rsm22"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="398"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00045681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="532" mass="61677" checksum="1F5BD8A7FB0AFE53" modified="2025-10-08" version="1" fragment="single">NRKIFIELNYPNGWTESKKDEKTFARFLYSKEIPKWTRFNAIRYFADESILTYFVIRRILSELEKRVPEYNPSSILDFGAGTGSAILAAKEVFRNLKSLNAIENNTEMTNLGKLMTFVDESKFASKNESASKTNWQKSIDKEHLKNQSLTVAAFSLSEIEEKEEFFAVLEKLWAKTADFLVLVEAGEPHGFKRIRDARNHLLKKHPASLLPSSDGASVVAPCSHDGTCPLTFFRTKKWCHFGQKIPVFNIPRRSSLFVDPANPLKRVKSFPFLQKSVDADTKNVQNNFKNNVDNNKKNNGENNLSENTEKTGKIVKRRQIRNSYEHIFRFSYVIIKKGKSVRRKLEDRRAVSMLRGPSFSRKIFDGFENKIYENKNGDNKNAKNENFAKIDNKNGDNKNAKNENFAKINNKNDEHKNDIKTEEKMREMAYRWGRIIDKPMKKKGHVILKLCSDGEIETRVVTKSFGQKYKAARHSRWGDLWPHPLEKVETAKTAHRRKFAQIRKDKKLKQRMIDEKKVLLVESAKMLGDNNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV8</accession>
    <name>A0ABV2AMV8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Coatomer subunit gamma</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">MHBO_002363</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasmic vesicle</location>
            <location evidence="2">COPI-coated vesicle membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the COPG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000824">
        <property type="protein sequence ID" value="MES1920723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1480">
        <property type="entry name" value="Coatomer, gamma subunit, appendage domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013041">
        <property type="entry name" value="Clathrin_app_Ig-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017106">
        <property type="entry name" value="Coatomer_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013040">
        <property type="entry name" value="Coatomer_gsu_app_Ig-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037067">
        <property type="entry name" value="Coatomer_gsu_app_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10261">
        <property type="entry name" value="COATOMER SUBUNIT GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10261:SF0">
        <property type="entry name" value="COATOMER SUBUNIT GAMMA-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08752">
        <property type="entry name" value="COP-gamma_platf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49348">
        <property type="entry name" value="Clathrin adaptor appendage domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="7" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="9" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Clathrin/coatomer adaptor adaptin-like N-terminal" evidence="13">
        <location>
            <begin position="9"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="Coatomer gamma subunit appendage Ig-like subdomain" evidence="14">
        <location>
            <begin position="290"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="458"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF08752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1920723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="527" mass="61199" checksum="6C9AAE4C0B522237" modified="2025-10-08" version="1" fragment="single">IVKYSNKFKSKIKTFKSEIEFLVDSPNKNIASLAMNTLFKIGDKSSLSLLLETLSQRISNLPETMKLELLSTVTIACQKYPLKLNELVKIMSRILQNEPNFKPKQFIVTEFEKIIESDDKLREICLANLCDFIEDCEYSDLTLQILNIIGTNAVRSKTPSNYIRYVYNRITLELPLVRCAAVDALANIGKTVPALANYVKVLIQKCLNDSDDDVRDRAIINLAFFNIENDVNNNLKQFTSGFLDNLEYSAEIFLKENNKETFTMNNLKEKPKTKEDQKQKEIIENFEEKNDFAKIGDFGEKLKTTDFEKLTEIESEYFTECRKHIFGLKIVLEFRIKNEVENSILDKIKIFINENPKFFKINKFVQNENKIGFGDIATCFVVLDRKSEIFFAKTKCKMEFVTKQNGEEIEDEYILEDLNFKLKDFILPKKLNFGDFKTNWEKSKNCETIEKLVYLSRKDNLSKSVETLEETLKMATIQRVRKKDKEILNLMAKTCNLGTEENFKDLMVRAVLTNLVENSQQKVVLQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN65</accession>
    <name>A0ABV2AN65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002692</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001089">
        <property type="protein sequence ID" value="MES1921107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043136">
        <property type="entry name" value="B30.2/SPRY_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="371" mass="42259" checksum="1D3D62AB740BD585" modified="2025-10-08" version="1">MISELLKLENLEHNADLEIWSFVQNSLSSIFYSIEQNALSLNKARELLPILNKFALKNVFSTTVENGDVNRIRNALVNNENMLNDFKMVDFEDGTKEMKLKFNSLRESTPFCVFKDNFLTVKYHGGNKTSDGLDLPLTINSTFPITDGTDIEMKIEEMSHPNSLIGLGIRPMKTMTDNKQPLGFSPGSFAFYGAGPVSEFDYVPKKPLNFESINIGDFYDVYAPWHIKKWLRGQIADKTENMFKIRFTDLPSKNDIWSNFVKGKIQPFGTRNLISLPGNYCLKKTDFKFGRGDTVGMLIKNEKLFFRVNSEPFFKAFELPSIAENIRKHNFVIACALSPGIKVGFNFGQKSFEFSEMEPKTVNQTTTGLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN73</accession>
    <name>A0ABV2AN73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002511</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000937">
        <property type="protein sequence ID" value="MES1920894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="19"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="80"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="157"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="170"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="200"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="240"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="270"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="309"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="333"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="356"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="401"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="442" mass="52020" checksum="E30950F600CA9C64" modified="2025-10-08" version="1">MGKKKSSVESVSIALSDIAENAPKTIQLPSGPTQGQYEKNSRDYGFNQNTRCNYKTYRVNDRQTSFNRPVRNRSIQRFDGSNERNDEAFESRRNSWNPKNFAKLNPSRGAKHQFNSSPRQNFRRNTIDTENTSFDGPDQKIVDFTGIRTHKDKSDSADNVTKRNTFNRNVSDRRRNREFSQHNSETRFGRNLNRKTFGGTERRENRRFQQNRTERRNLSSKTSVFDNFRKIEAPVQKTGPKKDTTKNDSDKTRTNENGLKNGKNPIAKNPKNEKETTKETTKSEKVRKEQTEDSERQKLWQSRNRKPKQQTEKSSIKPEEKATRGISLSRLMKMTENEKKKHLQTKEPKQSFNYGRTEKSNDHRSQNDDRKELSVADQLKKRMTNRRGKEDVLTKLSRKQLLNEEAARREELKKRAEKKIEKQRKLAKRLERLFIDKRGDNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN86</accession>
    <name>A0ABV2AN86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002704</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001097">
        <property type="protein sequence ID" value="MES1921122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="116"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="126"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="144"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="169"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="204"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="222"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="311" mass="35870" checksum="DF3EDE6BCF61DCFD" modified="2025-10-08" version="1">MKESKDAIDIKDFTESKQKMSIEKQQQKEMEKTMIQQDEATTVNEGQTIAEESLKKEEEMKAEEDKTDFEADNKSDESIITKTTEKDNISEENKVVTTSIQNEDEEVKTINQEKADENDDQEEKDDLVKAVVEKEKTVEKDDNQEIADEKDDQEGKDEKDGQVKTVVESIKEETDKKDDKEETDDQKEKDVESIKEETDKKDDNEESVEKDDKEETDDQKEEADAKKDESVVENKEVDKTTEGEKNVQTDPEKEEKTSEIPENEVEKKGENQKDEVEKKGENEKDEDNKKGENENQKGEDSVPTKATVFYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANL4</accession>
    <name>A0ABV2ANL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">DnaJ subfamily C member 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">DNAJC3</name>
        <name evidence="8" type="ORF">MHBO_002819</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001203">
        <property type="protein sequence ID" value="MES1921265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45188:SF2">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45188">
        <property type="entry name" value="DNAJ PROTEIN P58IPK HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045532178" evidence="6">
        <location>
            <begin position="22"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="324"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="7">
        <location>
            <begin position="378"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="444"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="245"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="444"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="483" mass="55975" checksum="875DEA5767160471" modified="2025-10-08" version="1">MSVKLKRLVVIILCHFLYINTKMLKSEISAIKDQCDLLLSQSKYRKAVECVNKIIKEEPEDAQNFFKRATAKFAQAKYRLAIKDLEIVIKIDPNFAPGFDFLSKSHSYLCQLDEATKHLKKAMKISSKNKDDFSKRLNDIKKVRNYHRKMGKLTCKDFYSLSKLVAVCEYDQKLLSLYATCLNETKRYNELAKVANKLIKIDKNDILWYELLALAYFNQGKIKMALKVTKVGLRSDPENKKVAILHKKIAKIDRLQRKLEKSRSEYNNVETQKTCDELLKFLPKKTFAEAETQLTLCGARIDSKLFEKAVEACSVALTFDADNFEALKLRGSAYMETEDFERAAMDFKKAHSIDPSDQEVIRKYRAAQQKQKAAEMKDYYKIMGIPRNADKDTIKKAYRKNALKWHPDKWKKKSDKKMAEKRFADLNEANKVLSDDKLRRRYDRGEDVYKDDGNRAGPGPNFGGGGFPFQFRDANGNTFFMQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT6</accession>
    <name>A0ABV2ANT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002872</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001252">
        <property type="protein sequence ID" value="MES1921331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12001:SF69">
        <property type="entry name" value="ALL TRANS-POLYPRENYL-DIPHOSPHATE SYNTHASE PDSS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12001">
        <property type="entry name" value="GERANYLGERANYL PYROPHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="257" mass="29319" checksum="74C765E8C7D7704D" modified="2025-10-08" version="1" fragment="single">MLSSNFFFLQIERRCLNEIKVQIYRSFSVLKKSPFDIIDKSLIKFESNFRKNLPRDYSPLTEMVIYATQNSGKMFRPCLNLLFAHAIGTNKISNEQIMLAEVTELIHTCSIIHDDIIDKSDKRRNVESVSKKYGEKAAVMCGNFFLARASYKTALIGNPSVTKLVSNTIEDLVNGELLQIKIEKDFRFDKLMNMYINKNYLKTASLFEKSCKEIAILSGCNNELINNVGEYGKNLGIAFQIKDDLLDFESSLSNETG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP75</accession>
    <name>A0ABV2AP75_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002868</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001247">
        <property type="protein sequence ID" value="MES1921324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379:SF121">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379">
        <property type="entry name" value="KRAB AND ZINC FINGER DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13894">
        <property type="entry name" value="zf-C2H2_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="10"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="39"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="70"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="97"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="124"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="382" mass="44365" checksum="9C2BB98E93D35F75" modified="2025-10-08" version="1" fragment="single">PKNSNQKNLFSCSFCSKKFARAPNFQKHLNSHQNIPQCHPCWYCQKGFSRKCVLVRHVKEVHQFDDKNRVRCPKCSKSFKFKTSLSNHLKIHNDEIFKCAVCGKVFKCKRYLNTHMQRHGESMHACKVCGKMFAAHVDVLKHNKVHRENFRCAKCKVVFKEMAGKIVHCCSESKKRKFRISDEMASDFVKTVRNAALNGRKYSVDEAMRLMSQTIPSSLCTEHILFSLSSRFDLKFYDLRKNNCPPPPPPSKSNLVKMGENATFEKSSFPATKTSLVIPKTALPEKSKVHWYLRLEDENKISTEIEMQTREVIEMIKESADKGFDNIKLIFNAENETKLMIAITKSMEEKGFKCWNCREIENERQSQYYSLNIEWGHLSASH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG3</accession>
    <name>A0ABV2APG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">40S ribosomal protein S23</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPS23</name>
        <name evidence="6" type="ORF">MHBO_003100</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001492">
        <property type="protein sequence ID" value="MES1921567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03367">
        <property type="entry name" value="Ribosomal_S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006032">
        <property type="entry name" value="Ribosomal_uS12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005680">
        <property type="entry name" value="Ribosomal_uS12_euk/arc"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00982">
        <property type="entry name" value="uS12_E_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11652">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00164">
        <property type="entry name" value="Ribosom_S12_S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002133">
        <property type="entry name" value="Ribosomal_S12/S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00055">
        <property type="entry name" value="RIBOSOMAL_S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="10"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="15682" checksum="DECB9B1543EAF60F" modified="2025-10-08" version="1">MGKGGINAARKLRTKHRTKRWARKSFKKKRFGNGLKSNPFEGASHAKGIVVEKLGIEAKQPNSACRKCVRVMLKKNGKKITAFVPLDGNLNYIHENDEVLVSGFGRKGHSVGDIPGVRFKVVKTAGVALKSLFTGKKDRPKTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ3</accession>
    <name>A0ABV2APQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">E3 ubiquitin-protein ligase herc2</fullName>
            <ecNumber evidence="2">2.3.2.26</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">HERC2</name>
        <name evidence="2" type="ORF">MHBO_002962</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001342">
        <property type="protein sequence ID" value="MES1921431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF408">
        <property type="entry name" value="OS09G0560450 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13540">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="10926" checksum="BC61F3640BB2740B" modified="2025-10-08" version="1" fragment="single">TTDRFFLGAPTSSGSWGEATKSFEHIFRYCERPASVEGLEGVAVVHITTGDNFSACLSDKGEVFTWGDNFNGQLGHGDEKDRVWSINTKNRRERRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV8</accession>
    <name>A0ABV2APV8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Pre-mRNA-splicing factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CWC2</name>
        <name evidence="6" type="ORF">MHBO_003111</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001505">
        <property type="protein sequence ID" value="MES1921579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039171">
        <property type="entry name" value="Cwc2/Slt11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14089:SF2">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR CWC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14089">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR RBM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="50"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="361" mass="42092" checksum="6E8A32E222829E5A" modified="2025-10-08" version="1">MGFECRYFHHLPTQQEIEHIPVTKDVFGRDRHSTDKEDMSGVGNFNKENKTLFIGRVPGKATDINNLLYHHFSEWGDIEEINIPSDKSMAFIRFQFRSSAEIAKVAMDCQSLGFGDILQIRWAHEDPNPKRRRAAEEAEKTQAKKKLVQRATKILQKTDLANLEQNLITKNENEIFLREKIAQENEEFEKKIGEYQNWLNIVDNDDFKDNVQNNNNLENDNNDLIEPPGISNKTNFENITNKNYEKMSLSDMETNFENTTNKNYEKMSLSDMDKISNKTNFENTTDKNYEKTSLSDMDQHILNQKDGQNLTLKPPPGIKRKGKKIVKKNEIRFSTKPLKLKNPKKYKFPDINKQIDNALKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ4</accession>
    <name>A0ABV2AQJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003457</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001954">
        <property type="protein sequence ID" value="MES1921931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="25182" checksum="D96946F130CADAFC" modified="2025-10-08" version="1">MTTVICIQGVHKNYKPKSGVQKICNFCKITTMEYYLRPTFRPGWLNLYDRNKINYLKYYLSQFEWTEKYLFSQKINWNTKQCDPRIKRKTENYYKPVNLLKRNDFCINRPKLDSNFFLEETEFSSDDFDIKNCKIVKIFDAKKICENFGNMTSGIKKSLSLEIENKKRVEEATEYLDKNLNRKMTTRKMSNCKNIKINANKKPIFIDLCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK6</accession>
    <name>A0ABV2AQK6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Origin recognition complex subunit 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ORC2</name>
        <name evidence="3" type="ORF">MHBO_003460</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the origin recognition complex (ORC).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ORC2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001957">
        <property type="protein sequence ID" value="MES1921934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007220">
        <property type="entry name" value="ORC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056772">
        <property type="entry name" value="RecA-like_ORC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14052">
        <property type="entry name" value="ORIGIN RECOGNITION COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14052:SF0">
        <property type="entry name" value="ORIGIN RECOGNITION COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04084">
        <property type="entry name" value="RecA-like_ORC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Origin recognition complex subunit 2 RecA-like" evidence="2">
        <location>
            <begin position="5"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU368084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="237" mass="27318" checksum="B04CC58C04DC70CF" modified="2025-10-08" version="1">MIDTEKWRVHIECGYNILLFGIGSKKSILLKLLKTADFNDFHRFFVDLNSPKLNLFKILEEIYSKISKTSDLGNRKKIAKKANLKIKGKGVISICKDLKKIMKQSKTKVLLILNSLDNANCDFKNILALSRMASFESVRVIASCETFNIEPLTDSEIFDNFNFIWEHHPTDDFSDLRFRQNLQNSTKTNENGLVFVFKSLTPSQKDILSLFGPLYFDKLDEKSRIFSKIDNKNGSIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR3</accession>
    <name>A0ABV2AQR3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WH2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001818">
        <property type="protein sequence ID" value="MES1921824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003124">
        <property type="entry name" value="WH2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02205">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51082">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WH2" evidence="2">
        <location>
            <begin position="221"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="235"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="102"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="128"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="144"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="170"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="31263" checksum="334DEAA1F90F3691" modified="2025-10-08" version="1">MTISLASQLRKNNNFDMMLSIKAVGEACIEKEKRFRFSSSLSNTQKAISKEKSFKSAGTLPSHSDLNTPKFTIRNDYGDPPPLPQQTSALQNPKPPSFTSNPPTPPKPSPPPKPSPPPKPFLQNQTVPPKPPSRARMPPPPKRIQSSQNRHSLQPPSFSKEPTPSNDSLLPPPFMNAPKPPHNDSLVPPPIENLVKPPSTRNLTSATNPPPPNSNHSEKGGRADLLMQIQMGKQLKKTEVKDRSIPGPPPEDASMANALRLKLEDQRKYLAELNESSSEDSIWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQY6</accession>
    <name>A0ABV2AQY6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003479</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001984">
        <property type="protein sequence ID" value="MES1921954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="184"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="4"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23952" checksum="3BA14A8646E2B91C" modified="2025-10-08" version="1" fragment="single">KKILSQLKEALEDIDKERLLKEEKERKILQLEDKLNEKNNQIEKLLKNEKKKRKNIHNNNLFEIYSSNSKKAKNIIDEELELLKKTLDENIYSKSNLSEDSADSSFSAEVEINKKIEPKITKKNKIALEKNVKKKALKNFKDSKKEVKKSAFLAKSGNIKKKVSFKTAEEPVLLFSQNAVKEKIDGKSPEPKRLSLRERIEMSKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR16</accession>
    <name>A0ABV2AR16_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA topoisomerase</fullName>
            <ecNumber evidence="1">5.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TOP3</name>
        <name evidence="3" type="ORF">MHBO_003508</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the type IA topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002022">
        <property type="protein sequence ID" value="MES1921984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003917">
        <property type="term" value="F:DNA topoisomerase type I (single strand cut, ATP-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.20.10">
        <property type="entry name" value="Topoisomerase I, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000380">
        <property type="entry name" value="Topo_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003601">
        <property type="entry name" value="Topo_IA_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013497">
        <property type="entry name" value="Topo_IA_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013825">
        <property type="entry name" value="Topo_IA_cen_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023405">
        <property type="entry name" value="Topo_IA_core_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390:SF21">
        <property type="entry name" value="DNA TOPOISOMERASE 3-ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390">
        <property type="entry name" value="PROKARYOTIC DNA TOPOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01131">
        <property type="entry name" value="Topoisom_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00436">
        <property type="entry name" value="TOP1Bc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56712">
        <property type="entry name" value="Prokaryotic type I DNA topoisomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52039">
        <property type="entry name" value="TOPO_IA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Topo IA-type catalytic" evidence="2">
        <location>
            <begin position="1"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU362092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS52039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18456" checksum="7F48C0CB5EC9C667" modified="2025-10-08" version="1">MEVDLRVGSAFTRFLTDKLQNRFSGLDQRVISYGPCQFPTLGFVVRQFWKIKNFVSEKFWFIKMAIQHENQQIVFNWKRRKLFDHAIAFVIFEMLFDNPTASIISVERKPVTKYKPLPLTTVELQKLSAIYLKISSKKTMDVFGKIITTKNIKLQTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR20</accession>
    <name>A0ABV2AR20_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Non-haem dioxygenase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003631</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002240">
        <property type="protein sequence ID" value="MES1922116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209:SF874">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209">
        <property type="entry name" value="OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Non-haem dioxygenase N-terminal" evidence="4">
        <location>
            <begin position="14"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="346" mass="39563" checksum="4DA4E0D730D7B521" modified="2025-10-08" version="1">MDKMDKKLKGPTPIDLSTFLYEKENGDQICRKVVENLHKYGILVVKDPRVDFKKNQAFIEMLEKYFGKPTDVKMKDAHPEIFYQLGVTPHFVEKARARCQEMKVFDKKNMPLTLCPPEKDPKWRYFWRIGPRPEKTEFAQLNASPVIPEDFPEWAEIMDNWGDRLLETAKTVAKMAAVGFGMDENVFSDFMEFGPHLLAPTGSDLAENGEKGTVFAGFHQDLNFLTVHGKSNYPGLFVWLRTNEKIAVEVPEGCLLVQAGMQFERLTGGHVLAGFHEVVVSDETLEKMRERKKQGKSLWRVSSTLFAHIASDNYLEPLHPFPNDKKYPRVKAGAQVLEELNAIINN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR57</accession>
    <name>A0ABV2AR57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002103">
        <property type="protein sequence ID" value="MES1922029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12717" checksum="B4398E44A287AD7E" modified="2025-10-08" version="1" fragment="single">MDVFLFYISPMKHLFLAFVSTILALWAIIDDVLDPCFTYISIMLSFLALYKTAPSVLSSIFLTIKTSTWVIYLDYMNAILRYVNILSPVGYTFGITVQGLLKLLHRSAFLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI2</accession>
    <name>A0ABV2ARI2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Poly [ADP-ribose] polymerase</fullName>
            <shortName evidence="4">PARP</shortName>
            <ecNumber evidence="4">2.4.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PARP14</name>
        <name evidence="7" type="ORF">MHBO_003791</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ARTD/PARP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.-" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010002515">
        <property type="protein sequence ID" value="MES1922280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003950">
        <property type="term" value="F:NAD+ poly-ADP-ribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.720.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.228.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051712">
        <property type="entry name" value="ARTD-AVP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012317">
        <property type="entry name" value="Poly(ADP-ribose)pol_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004170">
        <property type="entry name" value="WWE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037197">
        <property type="entry name" value="WWE_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45740">
        <property type="entry name" value="POLY [ADP-RIBOSE] POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45740:SF2">
        <property type="entry name" value="POLY [ADP-RIBOSE] POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00644">
        <property type="entry name" value="PARP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02825">
        <property type="entry name" value="WWE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56399">
        <property type="entry name" value="ADP-ribosylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117839">
        <property type="entry name" value="WWE domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51059">
        <property type="entry name" value="PARP_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50918">
        <property type="entry name" value="WWE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="WWE" evidence="5">
        <location>
            <begin position="39"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="PARP catalytic" evidence="6">
        <location>
            <begin position="146"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="293" mass="34813" checksum="A9D5CBEA2956FAE3" modified="2025-10-08" version="1" fragment="single">KMADKNFYKIKSKLSKFLGLTQESHFRLTDKMIFESFKKIENSQNLSFANAVWLYKDNKNKWERFDVEASKEIENYFKGNSVLAFRPTKGFFENNLDYLIELYPIKSKNEILFCQKNTKTGFKRFIKREIMQKHENNIKESFLEWILTNWKYQKSNISFYETNFMSEEHQKISQKFRHNFTNSRIKSITRVQNKLLAILFLTKYQTMLQEIKESLLNQKSLNEYLLYHGADHLSIEGISNQGFDIRLNGKNATRLGKGAYFSINPKYSHNFAKTDKKAQTFKIVLARVLPGEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ4</accession>
    <name>A0ABV2ARJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003681</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002317">
        <property type="protein sequence ID" value="MES1922164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10527">
        <property type="entry name" value="SET_LSMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1410.10">
        <property type="entry name" value="set domain protein methyltransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18337" checksum="B1B49CAF21E67264" modified="2025-10-08" version="1" fragment="single">MENLISRLKNAGAFINNLKITNRTNNDRFVQSISPLKQNEILVKIPRKLIITIENAVENETVSKYIKIKKVDPLLSTHTIFAVFILSEMKNEKWRYYLKHLPFQASTPLLLETSEMPLLIGTGAENRHKILRKVILDEYENIVDVKLLAKINLNHFLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV8</accession>
    <name>A0ABV2ARV8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Proteasome subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003908</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Non-catalytic component of the proteasome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase T1B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002721">
        <property type="protein sequence ID" value="MES1922396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016295">
        <property type="entry name" value="Proteasome_beta4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF6">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001213">
        <property type="entry name" value="Psome_endopept_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR001213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="27098" checksum="E58D638A87F55D8B" modified="2025-10-08" version="1">MGIIDNTNLDHIRNGEIQSFCGASSVIVIKYKDGVMAIADTLGSYFSSARFTDVRRIKRIGSSALIAASGDIADFQFIAAKLKSKIKKDIRQDDGFALSPKELFNSASVMMLEKRMDFKPLLNTIVVAGFQDGKSFIGTVDQLGTSYEEDFVATGFGLHMAVPILREEWRPNLTAEEAKNLLEKCARILFYRDSRAMNRFVIAQLILRNDEAECEYHCSKPFSLKTKWDFKGFKEEEYND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS00</accession>
    <name>A0ABV2AS00_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DNA2/NAM7 helicase helicase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003952</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA2/NAM7 helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002810">
        <property type="protein sequence ID" value="MES1922438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050534">
        <property type="entry name" value="Coronavir_polyprotein_1ab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041679">
        <property type="entry name" value="DNA2/NAM7-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041677">
        <property type="entry name" value="DNA2/NAM7_AAA_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43788:SF8">
        <property type="entry name" value="DNA-BINDING PROTEIN SMUBP-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43788">
        <property type="entry name" value="DNA2/NAM7 HELICASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13086">
        <property type="entry name" value="AAA_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13087">
        <property type="entry name" value="AAA_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA2/NAM7 helicase helicase" evidence="7">
        <location>
            <begin position="4"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="DNA2/NAM7 helicase-like C-terminal" evidence="8">
        <location>
            <begin position="231"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="80"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="332" mass="38236" checksum="0CDE9CB6677CADB4" modified="2025-10-08" version="1">MKNAVEIIQGPPGTGKSTIISSIIRNDLDYKTSRKKVIVTFLKNKAMESIIEKLTNHKILVFGAHNKLPPLCLQHEIYRKIDTNEQINKLRKEFKLFREKILVKISNLEEKMNEEETEPLKKEIKSTKKSLSDRKANLERRVQMEIRREIESADVILSTISSLAKIINAANKSSANLKVHTAILDEAGCVEEISTFAIFNLLPDNVILIGDHLQLRPLYFNQEQNYAMTSKKSLMERAIEAGCKHSTLDIQYRMHKDIMTLVSNLFYGGKLKMGDIVRERKNGVLWKDVNSIEKVEKDGMYFNDGEIEECVRIYERERNFDSTQTIMIIVFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS18</accession>
    <name>A0ABV2AS18_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">POLR3A</name>
        <name evidence="9" type="ORF">MHBO_003951</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002809">
        <property type="protein sequence ID" value="MES1922437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.860.120">
        <property type="entry name" value="RNA polymerase II, clamp domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007080">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044893">
        <property type="entry name" value="RNA_pol_Rpb1_clamp_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015700">
        <property type="entry name" value="RPC1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48446">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' N-TERMINAL SECTION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48446:SF1">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' N-TERMINAL SECTION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04997">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="8">
        <location>
            <begin position="7"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="30360" checksum="3C07DD51E0EE32CC" modified="2025-10-08" version="1" fragment="single">TPERKFNEKGPLDLRLGTSLKANLCTTCGFDLAECVGHFGHIDLPLPVYHVGYFKTTLRIYSSICKTCSRVLLTPKEKDKYKKELKENKLLGKYKVRKLVKEISSKCAKVVICYFCGNKNGSAIKAPKYYGILHRRNRRKKLSDNEIDLQDFKKSIEMNPELQKYIKSGTENPNPLDILNLFKRVPSYDLEYLNIDANRPEGFELNFRLDLLIRKLLVPPSCMRPTVNVDDSRSQEDDLTVKIRELVKISNTIKQNMIKGNITA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS71</accession>
    <name>A0ABV2AS71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005289</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002466">
        <property type="protein sequence ID" value="MES1922253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046160867" evidence="1">
        <location>
            <begin position="21"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="281" mass="32612" checksum="16E5DBC2002B2C03" modified="2025-10-08" version="1">MSKLIFIFVLKLIICFKTEAKNGGIINFQILSKNKLIVECVNGHFYNNVSSMFFDDKTNFVCEKNKKSKNYEKQFSKFIQKTNNNCFKKCSNFKKKLPKNAKIFCSPKSKIVYKIPKIPNFCVVTCPFGHFQNFTKINKEHTILIFCDSNYKKFKFAVYGDNRIFDFPDNLFCSSTSDNKEKISVYGNSNNEDKDNNNLQSTLKNKNECSFLSKNAILSKFGVFVKILECFESNENKKLCAFECFGKDFGKRPFPYLVSGDGEKRGMMQCDDPFVEQIFCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB6</accession>
    <name>A0ABV2ASB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004073</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003090">
        <property type="protein sequence ID" value="MES1922558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="18788" checksum="17F7B49D6C971559" modified="2025-10-08" version="1" fragment="single">MDYHIERKEITPDAKTENNKKTELKTEYLFFDGRFLTVLFSVIFQITGLFFVGLSVFYIFVATYTTFKYSNCSILRIDKAILGLVDCSDSKNQTFYSAINKSRAIICAICFAVIIYIKSQAGTSNIVYQKLEDAKTMDNFIKGLYFDGFVAHIFVELFLFSVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG2</accession>
    <name>A0ABV2ASG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Antifreeze protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004127</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003212">
        <property type="protein sequence ID" value="MES1922609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="77" mass="7713" checksum="E91062F384DD65A3" modified="2025-10-08" version="1">MKASDNSTVLKTATGGTFTNGTASNCPVADARAISVEGTFLLSHSGLEESAVISVTAVISGNPQSSGYSNFTIAIGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ1</accession>
    <name>A0ABV2ASJ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phospholipase A(2)</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003850</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002614">
        <property type="protein sequence ID" value="MES1922342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.90.10">
        <property type="entry name" value="Phospholipase A2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053322">
        <property type="entry name" value="PLA2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033113">
        <property type="entry name" value="PLA2_histidine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036444">
        <property type="entry name" value="PLipase_A2_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34228">
        <property type="entry name" value="PROTEIN CBG09474-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48619">
        <property type="entry name" value="Phospholipase A2, PLA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00118">
        <property type="entry name" value="PA2_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="124" mass="14085" checksum="15F97A1546708D48" modified="2025-10-08" version="1">MCTFIISLLSLVSANQLLREKWAANNGWSCGAEPISYFLSHRVWLGCQSQTFVELNHCCYDHDFCYDYSSYSYSECDDIFALCIRMVDKSGCSLAAFSSYAVITSVNKLGYMFKTSFAFDFSNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ2</accession>
    <name>A0ABV2ASJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004158</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003303">
        <property type="protein sequence ID" value="MES1922639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7576" checksum="6534E7290E7457A9" modified="2025-10-08" version="1">MDHLYWKHASYEAQMELTDCVKVTVTGNALLFNKHASISHFFNWIHVYYPEMFGGVAEAAPENSNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ2</accession>
    <name>A0ABV2ASQ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004222</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003461">
        <property type="protein sequence ID" value="MES1922699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24362:SF309">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24362">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE NEK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15076" checksum="1053A8D3E912DD3B" modified="2025-10-08" version="1">MFDRKGCLKMIGFGLCYDKLNSRELSNIRGTQEFTAPEILDRGNFEKVSDVFSTGACILVLWNKNYKNLHDNILTFLQTNNRPGFKQLIDISNKEIVDLVWNLMKYNPRYRMTMEKLKVHQYVVKYAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST7</accession>
    <name>A0ABV2AST7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ATP-dependent RNA helicase dhx33</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">DHX33_2</name>
        <name evidence="6" type="ORF">MHBO_004248</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003512">
        <property type="protein sequence ID" value="MES1922725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18791">
        <property type="entry name" value="SF2_C_RHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2130">
        <property type="entry name" value="DEAH helicase family, winged-helix domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042035">
        <property type="entry name" value="DEAH_win-hel_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF99">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX37-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="5">
        <location>
            <begin position="45"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="253" mass="28921" checksum="9FC8AF279AABE05F" modified="2025-10-08" version="1" fragment="single">FFTNSQIISAEGRIFNVKEKFLETRETDPVDAAIITILQIHTENNINDDQKFTKNGHILVFFSGQDEIERAKAILKKKITQFPNFCANLRIYPIFSALPTKKQIKVFEKVPKNIRKVILATNIAETSITIDEVEFVVDCGYSKKRFYDFKSGVDVMVNGLITKSEANQRKGRAGRVTNGVCYRLYTEEVYEQMREDIVPEILRTNLSTIIILLKSLGIKKMSELEFIDSPDKDSMNRSCKNLMYLGAISKNGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU0</accession>
    <name>A0ABV2ASU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004273</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003583">
        <property type="protein sequence ID" value="MES1922750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15783" checksum="9C2AECE8507934F2" modified="2025-10-08" version="1">MLNKLLSSDSNDSDFVPEESYSESYESDHKKDLETKIDHKKVDSIWKAMKESFDDLTPKTTINEKSANKPKNDVDDTKIDQTLRALIMGDSEEEKKEIFVEEKKIFAGKTFLKKTKVDENSAKAKLFKRKKFLKEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV3</accession>
    <name>A0ABV2ASV3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004177</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003350">
        <property type="protein sequence ID" value="MES1922659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6584" checksum="52A24E7615A76BB3" modified="2025-10-08" version="1" fragment="single">MVEVALRRLVLLLEENDSQHVNVNRILECVKATDNEKIAAKVFTHAANCMQTAKDNFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW0</accession>
    <name>A0ABV2ASW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PI3K/PI4K catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004278</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003600">
        <property type="protein sequence ID" value="MES1922756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044571">
        <property type="entry name" value="P4KG1-8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000403">
        <property type="entry name" value="PI3/4_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45800:SF11">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45800">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 4-KINASE GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00454">
        <property type="entry name" value="PI3_PI4_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50290">
        <property type="entry name" value="PI3_4_KINASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PI3K/PI4K catalytic" evidence="6">
        <location>
            <begin position="1"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="18244" checksum="622C958946D9C863" modified="2025-10-08" version="1" fragment="single">MKPRIYRNEVGTQGFRPGLFSGTGASREVAAFLLDHNGFSGVPLTTLTELSQVPGFKGGQQGPTESKIGSLQRMAGATEMSSDYGTRRFDVQEVHKIGILDLHIVNLDRNEQNILVRTRGDSQLLDFFPIDHGYCLPTSLAVTRSDWVWASWPQTRKSFSDRSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY5</accession>
    <name>A0ABV2ASY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004274</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003590">
        <property type="protein sequence ID" value="MES1922752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="28300" checksum="8378AB57E5A6FDCE" modified="2025-10-08" version="1" fragment="single">MRRRLPLNRVEEECSKNTTMSQRDESEIDEEEVKRALIEEARSVYVPPMMKPDQAPSKEVMARLEAEGWIYPTETEDRENAEMRRTLDEIYKEVEEKEPPKKPIKMISVHPPSEESTLYNEEDVTEEDYPPPFETQIEELEKLRLQRLIYKGEEERVDREKEAFIQLNRYEPFDPMTPKNIMLRKSLRKKMLSEREKRYPLGNHNNRKFPKYKESFQNQGMALQEQNSGTHGKWVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI0</accession>
    <name>A0ABV2ATI0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004206">
        <property type="protein sequence ID" value="MES1922975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5559" checksum="628F0AE69D83F72C" modified="2025-10-08" version="1" fragment="single">FAEYVGSMDAAPTNDDTSFLMYGMGAYCGNLKRLAYVEGEQSTCWLLRDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR8</accession>
    <name>A0ABV2ATR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004418</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the acetate uptake transporter (AceTr) (TC 2.A.96) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003970">
        <property type="protein sequence ID" value="MES1922889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000791">
        <property type="entry name" value="Gpr1/Fun34/SatP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01184">
        <property type="entry name" value="Gpr1_Fun34_YaaH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="9827" checksum="1D021DE0C12956E9" modified="2025-10-08" version="1">MMFFFIWMLPTTILMICSIKKSILITIALALIALAQLLYGIGAYVDFIEYCGGVIGMLGGLIFFYIGVALFTNENFKKEILPTFGTKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW1</accession>
    <name>A0ABV2ATW1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SH3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004646</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004692">
        <property type="protein sequence ID" value="MES1923105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.40">
        <property type="entry name" value="SH3 Domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036028">
        <property type="entry name" value="SH3-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001452">
        <property type="entry name" value="SH3_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00018">
        <property type="entry name" value="SH3_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00326">
        <property type="entry name" value="SH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50044">
        <property type="entry name" value="SH3-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50002">
        <property type="entry name" value="SH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0728">SH3 domain</keyword>
    <feature type="domain" description="SH3" evidence="3">
        <location>
            <begin position="18"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13840" checksum="EE313BE58E9A67DE" modified="2025-10-08" version="1">MTYKSKCQTSLKLSNNNTNSITVSASEQYSRATMNELQFGKGEKLQIKYRNKESGWCFGENKATKESGWISEDFISEKHKLDHLDVDKWQFCKCSGFVPNAFRPTLCKECFHNKNSHDEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ1</accession>
    <name>A0ABV2ATZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004658</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004741">
        <property type="protein sequence ID" value="MES1923117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="10280" checksum="1D02ED33B8078416" modified="2025-10-08" version="1" fragment="single">SENVPEDEKMMWRKEWLNCTKNLNEWDILFEFAQDSNNIELQFESSWRLSNWSYLRELCNIYEVEKVPKIRDVYCRNLKEIDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU32</accession>
    <name>A0ABV2AU32_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">YceI family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004706</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004937">
        <property type="protein sequence ID" value="MES1923161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="55" mass="5986" checksum="572C76D6AF5A5F79" modified="2025-10-08" version="1" fragment="single">ASVTLKRGGYVVSEVKDLSFTADIELGIEIEQGVFFPEFAVLEIEIKGVTVKGKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU88</accession>
    <name>A0ABV2AU88_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004785</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005245">
        <property type="protein sequence ID" value="MES1923240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="233" mass="26950" checksum="D99FC34752414690" modified="2025-10-08" version="1" fragment="single">SATLVIKFFDLVNVVPGFSKYSISILDFPEFDFNTQYVGRKFTYSNIPLISGKLNRFFKREMFANVVYPKSKVTKMNKDAVQQKRRDNNLVLNGENFDRSEGCVTVLKLEVQLNSFIKWLPNSRSMHVAVENRNGKLPDGDFLDWYCVLGLKSRHKKYMTKDKVVLYGYSTILWDEQFAFYEFSADSSDLKEKLLCVDLFLRGAEMSFLMGQCVVDLEKVLDEGNSEKKNCVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB0</accession>
    <name>A0ABV2AUB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General transcription factor IIH subunit 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">GTF2H2</name>
        <name evidence="2" type="ORF">MHBO_004503</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004195">
        <property type="protein sequence ID" value="MES1922972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007198">
        <property type="entry name" value="Ssl1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12695">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12695:SF2">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04056">
        <property type="entry name" value="Ssl1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ssl1-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23292" checksum="099975CF27B3CF1A" modified="2025-10-08" version="1" fragment="single">THLKKIKSSTDEKRGGSFSFTNSFSLARKLLSSIAPFSSKEIVVFVSAISVVGGNQLIKQFNEAIKEQLRISVLHIFAKTFLNNFITTATKGRHLVLARKSDNKDLKNLSEKISKPLKNIREKLFWIETGLFDNQKYHIELPSAIQNKFEKNCFHCKQCQTLISSVPAICPICDLLNVDFCNFLQTLQFIFCNVKKRRFLRFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN1</accession>
    <name>A0ABV2AUN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">serine--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Seryl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">SES1</name>
        <name evidence="8" type="ORF">MHBO_004892</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.11" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010005673">
        <property type="protein sequence ID" value="MES1923334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004828">
        <property type="term" value="F:serine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002317">
        <property type="entry name" value="Ser-tRNA-ligase_type_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11778">
        <property type="entry name" value="SERYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00981">
        <property type="entry name" value="TRNASYNTHSER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="7">
        <location>
            <begin position="1"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00031113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13453" checksum="1678E30605F2A135" modified="2025-10-08" version="1">MLNMALQNFAMQFLENRGYTMVQPPYLMNREPMALTCQLSQFDEELYHVTGEKSDVPKYLIATSEQPLSAFHRGEWLHPKNLPMRYAGISTCFRKEAGAHGKDAWGIFRVHQFDNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU0</accession>
    <name>A0ABV2AUU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004979</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006073">
        <property type="protein sequence ID" value="MES1923412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="11201" checksum="E036529FDD3742A2" modified="2025-10-08" version="1">MTRIYLIRMNRPNHELPLTTIIISNRQYLHRYINLRHTIYSLTYMIGGMVQLNRPRLIDWDLCALTIFCPIRSPHSLTYLTYGTRSLIIMDRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY7</accession>
    <name>A0ABV2AUY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004828</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005421">
        <property type="protein sequence ID" value="MES1923279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="47"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="9882" checksum="BDF86C0FD332E891" modified="2025-10-08" version="1">MDTLQSMINYTKLATEILKQQTAHQCANTETPAQQLGHEDKTIAWGRRRMYHADRDPQRKSGGYGSSHNLVAQILDDEPAGTSQNQNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY8</accession>
    <name>A0ABV2AUY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myosin heavy chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005052</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006368">
        <property type="protein sequence ID" value="MES1923475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="25"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="103" mass="12304" checksum="AAE005ABE4B7B3ED" modified="2025-10-08" version="1" fragment="single">EPLLETGKKVTDYDNAEKIENDIREHDASENAEKIEKDIREHELEFEEKVKDAIRVLELEFQQQTEKAIIELELEFEKKDNDIRQHDALENAEKTQNDIRNRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV17</accession>
    <name>A0ABV2AV17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005091</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006567">
        <property type="protein sequence ID" value="MES1923509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="6720" checksum="03AA58CDE535D6E3" modified="2025-10-08" version="1" fragment="single">LITLTCYAGIFSNLYLQCGTWVPQLRSIYSTNSYAGYLESSPNITSKGMHDAGIVVVTDTAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV24</accession>
    <name>A0ABV2AV24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SAPS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006495">
        <property type="protein sequence ID" value="MES1923503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007587">
        <property type="entry name" value="SAPS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04499">
        <property type="entry name" value="SAPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17681" checksum="EB3442B48254D41F" modified="2025-10-08" version="1">MNKKIIENGLIKTVLYVYLKYPWHNYVHILISQMVARIVEKDVFRLKKTLFLESDIVSVLSKSIDANSAYHSENGANLGSKVHTFRMIHCIKLQAQKDETVQHFCGRSEKWKDCLRFFVQSQEIYAKKIGDANIDCLMNNRRRDYGNVYFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV42</accession>
    <name>A0ABV2AV42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004802</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005337">
        <property type="protein sequence ID" value="MES1923258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7927" checksum="2F3A4B87FFE24BDB" modified="2025-10-08" version="1">MSQQYRRGYDMVAGSQMTYGKHRGKDCKWIAYNDPSYILWAKKQTDWRICGKLLEAAQNRQRDLCHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV74</accession>
    <name>A0ABV2AV74_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005154</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006909">
        <property type="protein sequence ID" value="MES1923562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="68" mass="7680" checksum="46D10ADD44562D78" modified="2025-10-08" version="1">MDALFGVALALVFPYLGLMIAPHNKEAVLAMIFVSTLIVIFFVGANNAVRFWFSVHNIYFFFIFLSGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVH6</accession>
    <name>A0ABV2AVH6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myosin heavy chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005033</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006296">
        <property type="protein sequence ID" value="MES1923459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="33"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="80" mass="9054" checksum="CABD13FEE9E0C5F5" modified="2025-10-08" version="1" fragment="single">LNTRIQAAKEAAATTAMQIGELLDDTKNLGTVKDSLERQLRDRESECKRLGDKLTEFEALRDELKEKMADMEESAAARER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVK9</accession>
    <name>A0ABV2AVK9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006427">
        <property type="protein sequence ID" value="MES1923489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="126" mass="14635" checksum="87F97DDC513D178C" modified="2025-10-08" version="1">MTDIIIKSILSATTGLHLANLVYTLFLWMLKKSAYKNNRKTFYLREKERFVFTSYVGKSISNLKSATKNFNLFNFDEIDSNAMLAFVTDTQKVFLILVGICTFNNKNDANMSFFLGLVLFYYTFQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVS3</accession>
    <name>A0ABV2AVS3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Piwi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005078</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006486">
        <property type="protein sequence ID" value="MES1923501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003165">
        <property type="entry name" value="Piwi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22891">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02171">
        <property type="entry name" value="Piwi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50822">
        <property type="entry name" value="PIWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Piwi" evidence="1">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13542" checksum="709FFE37EDCFE0B3" modified="2025-10-08" version="1" fragment="single">LKQVLTKRGNIPWIVNFKRIGNFNPFDGKTMLCGIDVNHDMKRNRATAGFCVSGDSRFSRYDTYVSVGVAGKEYIYGAEKCMIKSLMNFHSDNGFLPEHVIVYRDGVSNSQLTAILRTEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC1</accession>
    <name>A0ABV2AEC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000061</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="25741" checksum="0D18D2896AE36A5B" modified="2025-10-08" version="1">MSFYELIVHAVEDSIKSLNAIWKVTKYYKKKLGLTESERENQNILFRKHLDEFLLVELEQAKIEFNKKKEALSAQQKQCIDIAERLEESIDSFYHGEDKIEEILNSEDKSINDKLNAFQPMLERLVEKEASLKVLFQQNRNELLKMQEKFGDLNATNKSVFDCNKPVSKKLLKELLERKQLISKKIVFSLYFRRKKKKKVLKFWPKRFATNLNEIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF38</accession>
    <name>A0ABV2AF38_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000251</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000033">
        <property type="protein sequence ID" value="MES1918257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16884" checksum="F8D9CC6738312148" modified="2025-10-08" version="1">MQILFENKDAKIELLVGYKKLNTVVSLSNLATKMNCRIKFCDFVNVFPGFSRIDFSFNSSPLFDFDISTGCFKLTEIPGFSRWMQYFLKTEMFSGVIFPKKASLLLVNEDVEEKRVIGGLIMHGQQVSHSEGMLRVNFAYILIIYLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF65</accession>
    <name>A0ABV2AF65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000044">
        <property type="protein sequence ID" value="MES1918336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004870">
        <property type="entry name" value="Nucleoporin_Nup155"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10350">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10350:SF6">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="724" mass="83224" checksum="A1CD251D8BDE2A73" modified="2025-10-08" version="1">METDNIDNKEHFSSALKEKNFDLTETAYSRLIKFKESGRLSGLSTFTSRLLRPIWLYPVIVCKNLQAFSISGLAKNPEVVYSTKILQSILRPLKNVDEFLKKHKRIFYSVGAYNNYIDALKNRDFAKCHKIEVERVEGIHKIIVRTVEILTLFEHCSKSAISLQTIFGKIGKNQQQSLTQCSLAELVCTEKGETALRTLMIKMVEEKAAESEFFKDNCSSIFRIDDVLVCSAQNTLKKAANFYPNAALFEKELEKADKELIAAAEMTGREFPFDNVIAKMNEARNFPGIVKLCLRLAKIIKTNEKIQKVASDRLTESKCFEKALSAFDEAINLYKNENSLNSKNVHFSLFQRQLEFMRKEVVLDGNKTFLRKLFLMLIEKKNNLYLFRFRSDCEFLSEFLEEECSNNLEIANVALALYLENKQFFKAASLARYWSVMKEGVDFERRLELISKSQRYFLSIERPSQKEQSFNLASRQYQIRISLQKKLIEALYLSSESSERVAKQVLPIKQLYGEARSSKVYEICLELHRHNFLEDVGGRLLAKFWQFVVLSELQMALNSMDWKNSLRLSISPLIKLASKNCDPRFDALALCLEKANNEHSKTIGKWITDTFLQNGVEAPFLAKTYQKVVDIAINSGFAQNFKANCQITVSIASVIEAICRYSEKLDRNEKKNVLEIGSKLAEIWKGQRIKASNDLQMRARKHVNQSFFAACLKINQAVASSWNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF69</accession>
    <name>A0ABV2AF69_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000274</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000037">
        <property type="protein sequence ID" value="MES1918287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051061">
        <property type="entry name" value="Zinc_finger_trans_reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46179:SF13">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46179">
        <property type="entry name" value="ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12874">
        <property type="entry name" value="zf-met"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="9">
        <location>
            <begin position="24"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="9">
        <location>
            <begin position="55"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="9">
        <location>
            <begin position="85"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15818" checksum="BAC246CA7EC9BAAA" modified="2025-10-08" version="1">MKIQNFSPLFMAESDLIVKKEKSLECNLCRKKFKFSSRLKNHFQSHTNVQYRKIVTCTYLGCNRTYTKRSNLNIHIKSHHLRKNYRCVLCGKIYKFKQSLQRHREKNHRFGNSDIVKKQTNSFISEFVGKNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM4</accession>
    <name>A0ABV2AFM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Coatomer subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">SEC26_1</name>
        <name evidence="13" type="ORF">MHBO_000077</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasmic vesicle</location>
            <location evidence="2">COPI-coated vesicle membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011710">
        <property type="entry name" value="Coatomer_bsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016460">
        <property type="entry name" value="COPB1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029446">
        <property type="entry name" value="COPB1_appendage_platform_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10635">
        <property type="entry name" value="COATOMER SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10635:SF0">
        <property type="entry name" value="COATOMER SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07718">
        <property type="entry name" value="Coatamer_beta_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14806">
        <property type="entry name" value="Coatomer_b_Cpla"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Coatomer beta subunit C-terminal" evidence="11">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="Coatomer beta subunit appendage platform" evidence="12">
        <location>
            <begin position="96"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF07718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF14806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25301" checksum="0906217E7EC980E2" modified="2025-10-08" version="1">MTGYQDPLYVECTTRLSNFDIFIDFFVHNRTENTIKNIEIEIYCSDGLRSEESQKCAEIASGDCSKIALRLKAVSTDGGAIFACLTYNKTASELGVLWMKRLDLKIVDFLRPSECSDGDFAEMWAEFDWENKINLKNSDIELSDFRSKLVRATRMKCLTPDYLINDSGNFLSANFCAKSIFGDYVLMNISIEKIAENFIEGNVRIRSKKQTIARSLGKVVNSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD0</accession>
    <name>A0ABV2AGD0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000116">
        <property type="protein sequence ID" value="MES1918739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00033">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14366" checksum="5651D4B3148F599F" modified="2025-10-08" version="1">MSKFVKTLKAIIDYCIVTSPLNGKVNGKSVEFVPIGGKINIKCDEGYRLSKSGTISMKSKCVFGTALKGRLAVPIEECQGFVNDDLLPLFRTNFLLYNLKRNRVQIECARKWNFREQKKWENKDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD6</accession>
    <name>A0ABV2AGD6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000294</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11135" checksum="695D9A9C49DBE75A" modified="2025-10-08" version="1">MTDEFSSKEVDLLKSLKSNLDPDKYPILSKVKDISLHDPNAHERVSKREVFRSIKTIPDEYDNKAVKDIKSYENAEAACSACFVGVFFINFSFEIRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGH3</accession>
    <name>A0ABV2AGH3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000676</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14263" checksum="9B86E38312E0CA6C" modified="2025-10-08" version="1">MTASTASALNSRLTTATSPNCIALCLFFSPHSSFFSAILKLLAASLSFVVQMRKSGRFSNFVTALNTVSDKSSSSCLLFFLILSSWRMLAIENFFCSLFRNPRGSSPVFSFAFSHFLFNLPIKETSFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI9</accession>
    <name>A0ABV2AGI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000521</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000086">
        <property type="protein sequence ID" value="MES1918569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="93"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="350" mass="42024" checksum="A38353DC602887E9" modified="2025-10-08" version="1">MCSIRSCSFPNVPGISIDQTYHEICTQLWKYPLERYKKLFSALDGEFKFKFNEKTRCGFYSGACNRDFSFFLYQDSKKHSQRAMLCTCYMQSATRAISEMRFAIQKLRSLKEKKERDKNKEPDPNEYIPKKCPIQEFNEFYKRVETEGRENFDKAILIPVNEMYRCLLRISMLQKIEAVLKPFYLARNTPFDPKTKKKSFLKRLFGCFSNQKRKSISKEEKTSFLDKIDFGKYLETVEGVCRAEKQRFCNQRRNLYLILKCYFRTLMVSGIYYKSKTTYLDWLHQILVYENSRDKIDAEMRRKTDCEEVYFPEWIVPELPRLQKAKVVPDKPEMDHFDVDIGFHEREYFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK5</accession>
    <name>A0ABV2AGK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000481</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000075">
        <property type="protein sequence ID" value="MES1918518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="19239" checksum="BCBD6022ADF2BE74" modified="2025-10-08" version="1">MTSTAMVQYPINRKLTVPDDKRINCPKHKISFLDPPTKRRRFLRIDKNASCRKPKNDINSSTAFKKASKRVRDEISTAKLKWPEKFLKKSEGDKTKRVYTANDVDEILGTVTAEVYEEIERRLSFEFEMVLRQKLDEQLRQFRQFSKDNFAKAYGEHSLKYIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP2</accession>
    <name>A0ABV2AGP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000747</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000139">
        <property type="protein sequence ID" value="MES1918851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9358" checksum="1653AA05F0F61031" modified="2025-10-08" version="1">MGQNLLSMSRRDDESKHKKELESALVEIMKLKSRIANLKEVGKDQPASISSALQKGFEIEKEYLGLKKRNANLSFFDKFAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX2</accession>
    <name>A0ABV2AGX2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Trafficking protein particle complex subunit 11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000819</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000158">
        <property type="protein sequence ID" value="MES1918933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024420">
        <property type="entry name" value="TRAPP_III_complex_Trs85"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12975:SF6">
        <property type="entry name" value="TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12975">
        <property type="entry name" value="TRANSPORT PROTEIN TRAPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="679" mass="79578" checksum="4127413916451E2B" modified="2025-10-08" version="1">MTTIKSKMEKKESGFGKFFGFKIGQSPKYKNSDSHLFFHRDSEEISSRLLGDFNFLLGNYKAAIKHFQNFIDLLLQKKDARSSRYLGHCYEIMSLVYYLNDGACSKFFNFLNAAKSNYYKNKNVLGNLRLCGWLVGVIEKNPLQILTLGKTINHELEYFSLFSAIFTFKKAQLFEKTQYFGQRMQRKFGLCLVLSAFIFSKLGFSFLASDLFCEASELYKPERGWFNIDYFFCVKHSQSSNTTKSSSLSKIISVLGQTDLNVSKSTKLINKLKNGYEKTTFGVSELKFIRIDERSIQFSAKRKMEFTKSFSKDLWDLYCRCENFAFEPAMSELILRNENKPVEIFSETLKFSIKMRNLLNERLQFRNVKLFVVDLAMKIHIIIKQENFELKPKSETKINFNIKRENCVNKEIMLDKITFVVLDVVSSFFRLPKMENLNKKFKALPMSKVFEIDKNALKYKNLILEHRETDLELKFPERPIIIYPGDVVQTKIRAINKSDKIILIDEIKLCETDFNLKLSKRTPITILKETKISIALELLKRFESKTTKINFLVKYQNSEDYKIITVNCELHIKNPFEIEHNNDFSEYQNLHFFRITKNKLEDGAIAIKKISTDRNINLNINGLEKHSISKSLSFLASLYIKKNIISEQRFSKNNVDEIYKLIKMKNLRIKSFYLKNSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGZ0</accession>
    <name>A0ABV2AGZ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000833</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000162">
        <property type="protein sequence ID" value="MES1918949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.900.10">
        <property type="entry name" value="Dbl homology (DH) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035899">
        <property type="entry name" value="DBL_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000219">
        <property type="entry name" value="DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051092">
        <property type="entry name" value="FYVE_RhoGEF_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673">
        <property type="entry name" value="FACIOGENITAL DYSPLASIA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12673:SF159">
        <property type="entry name" value="LD03170P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00621">
        <property type="entry name" value="RhoGEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48065">
        <property type="entry name" value="DBL homology domain (DH-domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50010">
        <property type="entry name" value="DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DH" evidence="1">
        <location>
            <begin position="23"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13734" checksum="C4AFA73E305C84E0" modified="2025-10-08" version="1" fragment="single">MTSLFDEKALKKEQPQLNDDDPARFKIVSEIVSSEKRYVEQLNVLNSLYIVPIEASFETEPILTEDQSGVIFNNLTVIKQLNGIFFYKMKERLVSWNKNSHIGDIFIDFVPYFKMYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH93</accession>
    <name>A0ABV2AH93_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000143">
        <property type="protein sequence ID" value="MES1918864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="122"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="122"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18815" checksum="2BD4C94C03AFBCB9" modified="2025-10-08" version="1">MQSVFLNIRSFVPELDILSHQSLMTKIVNEIWDFHCDVFRVQRVLEMECVFKELVGFDRKNLRFSEQNMAPGIKFYSKIREEVARLTFEERETEKSMEDKKFEKILNENEKKLDENGEKKFDKKCEKRSDENGKIDEKCEKRSDEKDEKGFSNKKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH1</accession>
    <name>A0ABV2AHH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000974</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000201">
        <property type="protein sequence ID" value="MES1919110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="72"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="108"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="143"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="153"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="164"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="174"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21252" checksum="3313A8626E90BE19" modified="2025-10-08" version="1">MVLSMIMRTITIFAIIARAVIATIYFSSRYSLNNFGYAFFNDVLLNAYIYTTLLEISMFLTMFFPIDLVLRFLLAFLLPLAILMANIDPIMFLLKLWGTDHSKTDRTYTLILVLITIGIIVIGIIYAFYGEKEASVDLSEKTASFPESSESETETKTKTEISPKKKKHRRRKQTQSQIESGFSKVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI7</accession>
    <name>A0ABV2AHI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Unconventional myosin-Vb</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MYO5B</name>
        <name evidence="4" type="ORF">MHBO_001008</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000209">
        <property type="protein sequence ID" value="MES1919144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.720">
        <property type="entry name" value="Myosin VI head, motor domain, U50 subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="1" id="KW-0505">Motor protein</keyword>
    <keyword evidence="1" id="KW-0518">Myosin</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046239192" evidence="2">
        <location>
            <begin position="17"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myosin motor" evidence="3">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6906" checksum="3C67E02628B375B3" modified="2025-10-08" version="1">MCVFQIISAILHLGNVDFVGDSDDCCSVKDSSRKSLGHFCRLLRLDESEVMKILNTTFSFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP7</accession>
    <name>A0ABV2AHP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001079</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000228">
        <property type="protein sequence ID" value="MES1919218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="26468" checksum="BD1FCC9FA492485B" modified="2025-10-08" version="1" fragment="single">LSRKMYETLQSQIFEQRSNYQKMKSLVKADFPYLSDLHIQFCSVSHHSPGIGLETAANIARDRKIVLKLSLNNFSSAVKANLRALFPDLIKENVIELKCEEMATKNSNKHRAMELLSKMVHEAVLLEQTGQPSSIGEYAAKLETLENSEYIKKESICSQLRKSAERAKVVKINKTKIAKLAEMALKALNKLQGEEQTRKDIEKWQKLKNLSDNDIALLSQMRTTKNFKRER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHQ7</accession>
    <name>A0ABV2AHQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">SNW domain-containing protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SNW1</name>
        <name evidence="4" type="ORF">MHBO_001081</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SNW family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000230">
        <property type="protein sequence ID" value="MES1919221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017862">
        <property type="entry name" value="SKI-int_prot_SKIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004015">
        <property type="entry name" value="SKI-int_prot_SKIP_SNW-dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12096">
        <property type="entry name" value="NUCLEAR PROTEIN SKIP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02731">
        <property type="entry name" value="SKIP_SNW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SKI-interacting protein SKIP SNW" evidence="3">
        <location>
            <begin position="62"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="85"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="234"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="237"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="250"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="301"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="345" mass="40369" checksum="5A1C7D33FA96E8B0" modified="2025-10-08" version="1">MITTRPENENYFDKQISRKPTREEGLKNTEQTRTALEKIISGKIEAKKQRDIRKAKENEPVYVKFEPAQQHNSALKTRVIRLQEMPLDPLDPPKHRFRKQPMRASSPPPPVLQSPPRKLSRKEAAEWKIPPCVSNWKNVKSYTIPLDKRVAADGRGYESFTINSRFSALSTALYEAENVARENVRLRGEQVKRLAQQKRQKAEAELEKRAMGAIQQSHDAEFVSNVRERMEEKYNEAVAKASNRKSASARGEERPRYKKSSEESAKRLKERILREKLRKDRMHDRRRELRQEERKKKRGHQAREKRRDISEKIALGQSLKSNNIVMYDSRLFNRDSGGELEQESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU2</accession>
    <name>A0ABV2AHU2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">tRNA-specific adenosine deaminase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ADAT2</name>
        <name evidence="3" type="ORF">MHBO_000884</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000177">
        <property type="protein sequence ID" value="MES1919004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.10">
        <property type="entry name" value="Cytidine Deaminase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11079">
        <property type="entry name" value="CYTOSINE DEAMINASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11079:SF149">
        <property type="entry name" value="TRNA-SPECIFIC ADENOSINE DEAMINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="Cytidine deaminase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="2">
        <location>
            <begin position="2"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13136" checksum="46DA2553957D4E07" modified="2025-10-08" version="1">MAYEEKYMEMAFKEAERSLKNGEVPVGCVVVKRKFGIWTGHNRTNELENATAHSEIQVLQSIKKSLNSEFEEAVTGSSWYITCCFFQRRRTLHNVRVCTEGFEAEKHLFCVHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI49</accession>
    <name>A0ABV2AI49_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pre-rRNA-processing protein fhl1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">FHL1</name>
        <name evidence="3" type="ORF">MHBO_000812</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000155">
        <property type="protein sequence ID" value="MES1918922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045178">
        <property type="entry name" value="Fhl1/FHA1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21712">
        <property type="entry name" value="PRE-RRNA-PROCESSING PROTEIN FHL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21712:SF29">
        <property type="entry name" value="PRE-RRNA-PROCESSING PROTEIN FHL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SMAD/FHA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FHA" evidence="2">
        <location>
            <begin position="26"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23475" checksum="7AA0026C6EBF9078" modified="2025-10-08" version="1">MASTNYGFAKLVALSGDEFYIKSPTIILGRHSSNALSDKSVCFCPLSTSKLISRKHAKIFFNFSPVCFQICCICKNDIFVDEKIVTKENGAVTLKNGSSVVIGDFAFLFLLPKNFPDLQNRFKMASEKLIEFDLEIPKKEKTNSLNFRKNNFDRPKEKLLAIVKLIICENSSQKMTYEAVVNAIEQRYRHKHPEFYNFFIYRNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA3</accession>
    <name>A0ABV2AIA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001251</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000282">
        <property type="protein sequence ID" value="MES1919414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11799" checksum="ECD8CBB7042F80A8" modified="2025-10-08" version="1" fragment="single">MTLDKIDNVKEDQRGDFGEEIEAALKTPQNFGRIKSVLVKSFGIKKIEDENISPAKIAESINEEFKDSKNRELPSILTSSKSYFKISDKIFLTFWSKLGQTLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH9</accession>
    <name>A0ABV2AIH9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TFA2 Winged helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001041</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000218">
        <property type="protein sequence ID" value="MES1919178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040501">
        <property type="entry name" value="TFA2_Winged_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016656">
        <property type="entry name" value="TFIIE-bsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12716:SF8">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12716">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18121">
        <property type="entry name" value="TFA2_Winged_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TFA2 Winged helix" evidence="1">
        <location>
            <begin position="88"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="27627" checksum="C4388634AD722A28" modified="2025-10-08" version="1">MDTNKTKKPHIRFVIKSAIEFLKEKRKKSTLTEIFSETVFLGKKIKIESEKEMEKYSLNLRANTNVGSEINFNDEEIFFYKPKLVGIKDKEDLINYLRNNVNGILESNFEDCYPNVKKDIEILKKNNKITTFPSTTGDLIIFKIPDFCSNLIKNDKISVLWNSVKFSNVSQNDNLKMMKTELRQKGHQIFEKKDIKKNRNTIKKNKPKKRWNRINLTNKHLKGKFEIYKKLGKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP6</accession>
    <name>A0ABV2AIP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nucleolar and coiled-body phosphoprotein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">NOLC1</name>
        <name evidence="3" type="ORF">MHBO_001171</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000255">
        <property type="protein sequence ID" value="MES1919319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007718">
        <property type="entry name" value="Srp40_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05022">
        <property type="entry name" value="SRP40_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Srp40 C-terminal" evidence="2">
        <location>
            <begin position="159"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="199"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="27"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="81"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="149"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="199"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="225" mass="24907" checksum="9711FBBF3D2DB0DC" modified="2025-10-08" version="1" fragment="single">FENFFSKPLEEKKNDNKKNKKIEKKTSSNSTNQSSFESEKNKKKEFKEKSKKSVKNKIDKKIDPKKKHILETLKQSENKTTSSSSSSPTSSSSSSSSTSSSSSSSPSSPSSSSSSSSSSSSSSSSASSSSSSSDSDSDSKPKTKQETKNKRKLKEKTKPFKRVKANKDNSMKDNSYNDKSNYGKKAFIDFKDVKGKHFRKEKTKKKKGNYRGGKISLESNSVKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR6</accession>
    <name>A0ABV2AIR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001369</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000326">
        <property type="protein sequence ID" value="MES1919560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22322" checksum="3BC32DD9AAA82CB3" modified="2025-10-08" version="1">MLNLSRIKKFSLRFDPLGENSAPYRSVLFLLNHPYTKETILASNCKIETKIIQNDKNSPDLPQIEAEFVDGTNVKLVSEKMVDILEKLDFYTARIEIEKMGISKEFKDKSGYPIFHQKPKKSFGRKPYFPPEVLKFILNLSKIVRVAKQNKRVMLRKEIANLKWKARVKSFQSDWGENFDKVKPKTKLIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ67</accession>
    <name>A0ABV2AJ67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001508</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000381">
        <property type="protein sequence ID" value="MES1919728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12260" checksum="AAC6397D7711B63F" modified="2025-10-08" version="1">MIDVVDEFKYLGVNFDKKVTMRNHFEQLRIKTQRACSAINNLGKSLEDSTPKKSKIDVEKIRATEHKSLTSAIGVDKGCSRLEALTLSDCIPTQKRWALRALKFFVGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA0</accession>
    <name>A0ABV2AJA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">TRAF-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001519</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UFD1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000385">
        <property type="protein sequence ID" value="MES1919740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.50">
        <property type="entry name" value="Ubiquitin fusion degradation protein UFD1, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004854">
        <property type="entry name" value="Ufd1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042299">
        <property type="entry name" value="Ufd1-like_Nn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055417">
        <property type="entry name" value="UFD1_N1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055418">
        <property type="entry name" value="UFD1_N2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001293">
        <property type="entry name" value="Znf_TRAF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12555">
        <property type="entry name" value="UBIQUITIN FUSION DEGRADATON PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12555:SF13">
        <property type="entry name" value="UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03152">
        <property type="entry name" value="UFD1_N1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24842">
        <property type="entry name" value="UFD1_N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50145">
        <property type="entry name" value="ZF_TRAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="5 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TRAF-type" evidence="8">
        <location>
            <begin position="414"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="TRAF-type" evidence="6">
        <location>
            <begin position="414"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="465"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="511"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="480"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="511"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="557" mass="62756" checksum="BA628B51DAC4919E" modified="2025-10-08" version="1">METRVFGNDEIVLPSFPSIFNSENKNFDEGDKIVLPEGLLRDLMHGIGSHRNLPNPVIFRIVNKAKNKISHCGVLQFSALENSAYLPQWMMDNLLLKPGDAASFTLIENVAKLSYVKLKPISGKFFDNFDDPKAILENALRKFTVLTKGDTFLIKMGQKAYTFFVDQVAPETDYISYGCIVDSDLKVELDSPLKSSPNEAVEIYSGEEAVSKELEFLSQVRKNKKCFFKYRCRAGTKAKFELVSVVGDGDIYISKTILNPDNCQNDWENIDFEEKRKTIAVSSAEHDSKWLFVGVSSLSDFLKFELAVTAEQETSENCQKMSDKKNYEKTCDYCDRKIAKANLAMHAMRCRRVNWRCPECSSVMATSAKDTHTHCERCKAPLHSKNLQKHFALKHKAVQCACGQYYEPIGKIGHTKDCPLESLPCKHCNLKLSKEELADHELYCGGRSKQCELCGKRVATNSMTNHRAAEHGINPCSPRNEARPSSRSEDSPAAMDSNNDVEQMMIDKAISESLKESSEGLEEKARPSRGQKCPYCNQTVDGSEDIGLHMLRCYEND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI3</accession>
    <name>A0ABV2AJI3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA polymerase</fullName>
            <ecNumber evidence="5">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">POLA1_2</name>
        <name evidence="8" type="ORF">MHBO_001240</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the DNA polymerase type-B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000278">
        <property type="protein sequence ID" value="MES1919402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.10.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.60">
        <property type="entry name" value="DNA polymerase family B, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.690">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1600.10">
        <property type="entry name" value="Palm domain of DNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006172">
        <property type="entry name" value="DNA-dir_DNA_pol_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017964">
        <property type="entry name" value="DNA-dir_DNA_pol_B_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006133">
        <property type="entry name" value="DNA-dir_DNA_pol_B_exonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006134">
        <property type="entry name" value="DNA-dir_DNA_pol_B_multi_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042087">
        <property type="entry name" value="DNA_pol_B_thumb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023211">
        <property type="entry name" value="DNA_pol_palm_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00592">
        <property type="entry name" value="pol2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45861">
        <property type="entry name" value="DNA POLYMERASE ALPHA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45861:SF1">
        <property type="entry name" value="DNA POLYMERASE ALPHA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00136">
        <property type="entry name" value="DNA_pol_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03104">
        <property type="entry name" value="DNA_pol_B_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00106">
        <property type="entry name" value="DNAPOLB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00486">
        <property type="entry name" value="POLBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00116">
        <property type="entry name" value="DNA_POLYMERASE_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 5" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="3 5 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA-directed DNA polymerase family B exonuclease" evidence="7">
        <location>
            <begin position="14"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="DNA-directed DNA polymerase family B multifunctional" evidence="6">
        <location>
            <begin position="269"/>
            <end position="563"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="576" mass="65253" checksum="C3C7CA3829021162" modified="2025-10-08" version="1">MRILNNSDLLESNESNLLEKANWNKNLQPPLTVLALSMNTITTKDAASSEIASISCVLVPEMDFEKNFENGRLSKSISAFCCVRPLKDKALPPGLAKRAAEQGRALRICSSEREMLGFFLAKLLSTDPDVVVAHNLYKHHLPLLLARMKALKVINWSRLTRLRRSRMPFPRPMERGLPSGRLYVDTWASAIEFSFEKTYSLSHLAKKYFGMDTYSISPTEMKSKMASEVGIFEAIGSGCNEAFLTIRVMSHLSVLPLTKQLTQLCGNLWSGSLQSKRAERNDFLLLHEFHRRKHICPEKRKSNNSYSYNKKKARYSGGLVLEPQKGLYDKLVLLLDYASLYPSIIIEHDICFTTISQRDCDAGDELGIKENSSAKKGVLPEIVKKLLERRGNVKKLMNKTVSERERGSLDIRQKALKLVANSIYGCLGFERSRFYCKEMASLITLLGRKSLLAAKNAAEDVQLEPPPRVIYGDTDSIMVATGLLNLARAKRAAMEIIKAVNKRHMFMRIELDGIFRNIILLQKKKYAAKMVVGEKKGKIETKLELKGIDLVRREWCNFSKKLGSISRFNKGLWHSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS1</accession>
    <name>A0ABV2AJS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001491</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000374">
        <property type="protein sequence ID" value="MES1919709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21687" checksum="837804612DF7CDDD" modified="2025-10-08" version="1" fragment="single">MIESQPIEMKTQYLSYQVEASSLQEKNNDIEDNEYTNYAHRNESEKLPQNEIEQNKAIIQNKNDEDYISKSFIQNEFLAKPSKQYNQKCSCKQNNNSSITCDYTDQSMDQTESEEKVLDKKATKESQIEQNLDINNEIDNKTKDSFVIQSFEDEDRKQKNEKRVIDIKTTITNHPVEKDSIYYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJV7</accession>
    <name>A0ABV2AJV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chiasma assembly</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">msh-5_1</name>
        <name evidence="1" type="ORF">MHBO_001692</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000454">
        <property type="protein sequence ID" value="MES1919950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22655" checksum="066649D71FD8D0A9" modified="2025-10-08" version="1">MSVVSKPRSSKIGMAYYDLSDETLYCGEFKNLDDINICFDLNQHKLIFGTKKFSNLVKYRLMPLAITTFAKKFDNLYQQLQFNETNENVLFNVMTMPRSLFSVNNAKSELRKMEVRDFPYKTRNEIETNLAHRSLLDFEKIEMVSAVGGLLAYLFNHRIFNQLEDEQEIVSIKSIRYVKGLLFEKINCYKLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK53</accession>
    <name>A0ABV2AK53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001784</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000498">
        <property type="protein sequence ID" value="MES1920061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7618" checksum="23350FA290AAEB25" modified="2025-10-08" version="1">MGNIPSIREYKNFVRDQKINKNNVLKPKFPKSEELENFVKTNESSKSSKHKNSNYEEEKFLIEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK99</accession>
    <name>A0ABV2AK99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">MHBO_001820</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Mitochondrion intermembrane space</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the MICU1 family. MICU1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000513">
        <property type="protein sequence ID" value="MES1920103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039800">
        <property type="entry name" value="MICU1/2/3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12294:SF1">
        <property type="entry name" value="CALCIUM UPTAKE PROTEIN 1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12294">
        <property type="entry name" value="EF HAND DOMAIN FAMILY A1,A2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13833">
        <property type="entry name" value="EF-hand_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-0109">Calcium transport</keyword>
    <keyword evidence="10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="14" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047300968" description="EF-hand domain-containing protein" evidence="14">
        <location>
            <begin position="25"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="15">
        <location>
            <begin position="131"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="15">
        <location>
            <begin position="313"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00038333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1920103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="369" mass="43327" checksum="CD30B6D0E140E8AE" modified="2025-10-08" version="1">MFFRKWRTENFLKIFLKLPKFSLAAVPIAADEDWRQNIKRNYHNRIRSLSRPEKIFSTFASVTKDGEPVYVKYMTLDDFINSVVPFNCQSDHDKRNLRNEDYAAFFDSVDVDKDGLISLPEYALFSMLLSIPENNIETAFKMFDLDGNGRVEIDEFFNLIDVMSDKTWPGFSLRSIAKEAHLIKLFFGDKNEETLSFDRFKRFIVHLRRNINKMEFDYYDKSKSGFIDAKSFAFSITSYCSNNRIDHFIEKCKKIPIDLAKERISKDDFLMFNKVLSSLEEIRYALELFTSSQKALDKADFNRAVVTVTGEKLNKSVIDVIFYVFDEDGDGRLSQLELMKALEFRYKNKVEVWNEFGLKNRFDCVKSCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG0</accession>
    <name>A0ABV2AKG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001678</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000448">
        <property type="protein sequence ID" value="MES1919934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="9"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="13333" checksum="6B2AF07C42D8A02B" modified="2025-10-08" version="1" fragment="single">MFGNTSNALSNNTSGFGSNSNNSGGLLGSSSFGTTNNNMNATTGNSLFGSSNSSENAGSSLFGGSFGSSGNTFGNSNNNSNSLLAGFSANSNNSGSLFGNSNNSGIGNSVTDQDLNRMIGTKTFPYRRTNFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKI0</accession>
    <name>A0ABV2AKI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DNA primase</fullName>
            <ecNumber evidence="9">2.7.7.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">PRI1</name>
        <name evidence="10" type="ORF">MHBO_001878</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the eukaryotic-type primase small subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.-" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000539">
        <property type="protein sequence ID" value="MES1920176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04860">
        <property type="entry name" value="AE_Prim_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.920.10">
        <property type="entry name" value="DNA primase, PRIM domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002755">
        <property type="entry name" value="DNA_primase_S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014052">
        <property type="entry name" value="DNA_primase_ssu_euk/arc"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00335">
        <property type="entry name" value="primase_sml"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10536">
        <property type="entry name" value="DNA PRIMASE SMALL SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01896">
        <property type="entry name" value="DNA_primase_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56747">
        <property type="entry name" value="Prim-pol domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3 9" id="KW-0639">Primosome</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="411" mass="48168" checksum="AB7D4CC994E7BD01" modified="2025-10-08" version="1">MDEGNYRIDEFSLSAYYEKLFPFDKICKWLSVHNPTKSDKTDRTFNGLEQREFALIKSDGTFIRYQSFSNPSELRMEVAKKNPIRIEIGPIYSHKPSEKEKYPNFCATAKELVFDIDISDYNDIRTCCSENRICRDCWLLMACCIRVIDTALREDFGFQKILWVFSGRRGVHCWVSDERARNLSDNARFALSRYFTLFEKKGLREFDQFAQPHYSVTRAYRICRDYFAKLADSQGWLSRTEQIDKILGFIPIEFDKLKNRLKKSWTCDNNKSSKDKFSELENFVKKAENFRGKTKNLKNKISASVIAMVLKYTYPRLDIEVTRKLNHLLKSPFVVHPGTGKICCPIKTRDAEAETEYSASNECYESKWIADRFDIEKIPSLSNINPSENGEKSESRLKFEQIVDEFGDFYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY1</accession>
    <name>A0ABV2AKY1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">6-phosphofructo-2-kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002029</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000624">
        <property type="protein sequence ID" value="MES1920351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003094">
        <property type="entry name" value="6Pfruct_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013079">
        <property type="entry name" value="6Phosfructo_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10606:SF44">
        <property type="entry name" value="6-PHOSPHOFRUCTO 2-KINASE_FRUCTOSE 2,6-BISPHOSPHATASE LONG FORM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10606">
        <property type="entry name" value="6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01591">
        <property type="entry name" value="6PF2K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000709">
        <property type="entry name" value="6PFK_2-Ptase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00991">
        <property type="entry name" value="6PFRUCTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="6-phosphofructo-2-kinase" evidence="3">
        <location>
            <begin position="18"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="32416" checksum="537A2A713FAE5D1D" modified="2025-10-08" version="1">MSKVEGNEYPSPGLIRSVSANFSGEKTVVIMVGLPYMGKSFVARKLYRFFSWLGFNAKIFNVADRIQNEIDSSWTNDHELRKKYSCKVLYELTNYLKNEGGNLGIYDATNCSKDRRKLVIEILKSSLKNEEYHVVWVESSCGDERLGQIRQKKFRKRGQSAEEIAMEKEKMKYYESKYEPFDEDSELYIKIYEFQKLVSNKIEGYIPAKMLYFLSNVKIEPKPLFFTRHGESEYNVLDKVGGDSPLSAYGRKYAGELYGFMKTQPEFDEVKTKFCGQTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKY8</accession>
    <name>A0ABV2AKY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CSD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001684</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000451">
        <property type="protein sequence ID" value="MES1919942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46565">
        <property type="entry name" value="COLD SHOCK DOMAIN PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46565:SF20">
        <property type="entry name" value="COLD SHOCK DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="2">
        <location>
            <begin position="46"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24610" checksum="102E8B0837FE23F9" modified="2025-10-08" version="1">MSQNSVLQIPDRKTDSNPVSIKPSEHPDTEFHANNTVAPGNVPLQKVRGRCKWFNPEKGFGFIVPYSGGKDIFIHQSEIVAEKNRLRSLENGEEVEFTFYTNDRNKRRARDVRMPGGKPVRGKPRKYLLELQNEKMELEEKEGGAEDKYNIYPQVQQQVPQNLIEYQVNGITYHPAVEEVSDYMVLYATLWDNANQPLCDIWKFNDEFFVLGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL01</accession>
    <name>A0ABV2AL01_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HECT-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.26</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002023</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000620">
        <property type="protein sequence ID" value="MES1920342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2160.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2410.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050409">
        <property type="entry name" value="E3_ubiq-protein_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11254:SF444">
        <property type="entry name" value="HECT DOMAIN CONTAINING UBIQUITIN LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11254">
        <property type="entry name" value="HECT DOMAIN UBIQUITIN-PROTEIN LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00632">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00119">
        <property type="entry name" value="HECTc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="HECT" evidence="7">
        <location>
            <begin position="1"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="6">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="248" mass="28898" checksum="B1CA9BD581513B13" modified="2025-10-08" version="1">MIDLSFPRAFYKHLLNLKDFSFDDFKQIFPEVARSLKSLLEFEGNVEETFCRQFEVSYEWFGKEETAELIPEGSKKVVTNENREEFVDLYVQWHLQKVVAKKMKFIKKGFDRICRSKEQWVLDVLTADELNQILCGTSQLNFIEWKSKTTLTGYKWTDNVIRNFWQIIQNFDNSKKIRLLSFVTGSVRAPIGGLSVLPLRIIKGASTEMLPTSRTCFNQLVLPPYETKKKLEQKLSLALENSEGFGLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL23</accession>
    <name>A0ABV2AL23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002062</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000641">
        <property type="protein sequence ID" value="MES1920385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8319" checksum="D348F66E0FDCDC6E" modified="2025-10-08" version="1">MGIINLSLDQDTAYIDVVDSLNSVAIENRICFENCIKRNFEEPLEPQLTQEELNCIKLCGKISRSVIKMNKTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL29</accession>
    <name>A0ABV2AL29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002042</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000632">
        <property type="protein sequence ID" value="MES1920365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015496">
        <property type="entry name" value="Ubiquilin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10677:SF3">
        <property type="entry name" value="FI07626P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10677">
        <property type="entry name" value="UBIQUILIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="2">
        <location>
            <begin position="2"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="16524" checksum="553C2BBEE802A1EE" modified="2025-10-08" version="1" fragment="single">MAIINIKRTKGDSFKVDVPLESTVAEMMRKCKEKTDIEPSNQKMIYKGKILKPDEILKETGLEENHVVILIRSAKPSNPQQNVSNSANTDSQPQQPNYQQSASSAGFQPNSGNSGMFGQANMGGAFGNPELQNLLNDPAAMMQTMQNPVVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL82</accession>
    <name>A0ABV2AL82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002087</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000660">
        <property type="protein sequence ID" value="MES1920419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45766">
        <property type="entry name" value="DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45766:SF5">
        <property type="entry name" value="SNF2 DOMAIN-CONTAINING PROTEIN _ HELICASE DOMAIN-CONTAINING PROTEIN _ HNH ENDONUCLEASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="145"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="503" mass="58729" checksum="CF4F67C8B8CABD4A" modified="2025-10-08" version="1" fragment="single">CNNKHLKALLILCPKGILGDIFSFSKHYCGFKTKTRRGRTIVDVSGGSRLEELRTLLLHNLMMRRLKKDVQKELPKLLRQVMFLDISESLKHKKKSLKKFFKKIEERRTLDLLTNTNLPHNDENLDTMSEEQIIGILKLSKTCEFLSQMLKGTDAKTKIVVFAHHKNVLRGLIQFAESKGIGYMYIQGDVLPEERMDNIRKFHNVEECRLALISITAGNTGFDLSCSALLVFAEMPSTQADLRQCESRAHRRNQTKSVNVYYLLGRGTVDEKRWRSLSKQLKNTTALLNDQTENLSVDQISFLDKTLKLKFGKFAVDSDSVSKSLETGKSKIAQKKLIFGDKRAFSDKSNFVLWPIQCNRSKDRKSFKNVFEKNRQKRLENEVYWRRKTSTKEVKTPFVYVMMSQFSRRVFLFDGPKKEYYCNRSVDIDDILSFPDLRDFGRKMERIPLQISPIFNNKNFKLIRRFCLRWLETSKISQNKVLNKVIALDHRFVKNHKKIKCVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL91</accession>
    <name>A0ABV2AL91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NF-kappa-B-activating protein C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001785</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NKAP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000498">
        <property type="protein sequence ID" value="MES1920062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040466">
        <property type="entry name" value="NKAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009269">
        <property type="entry name" value="NKAP_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13087">
        <property type="entry name" value="NF-KAPPA B ACTIVATING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13087:SF0">
        <property type="entry name" value="NFKB ACTIVATING PROTEIN LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06047">
        <property type="entry name" value="Nkap_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NF-kappa-B-activating protein C-terminal" evidence="3">
        <location>
            <begin position="133"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="38"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="245" mass="27454" checksum="34D59B29DB87FC16" modified="2025-10-08" version="1">MDPALLEKRRLIRLKSAPILPKGLTIWTPSEEIDVDLSSTEDSDAKQIERTNNTKKYAKKRKIAETKIHKNAKNPSEIFSEKLTEKQQVPAKIAKNDDLAAGPKTVESTTEAKLSKRPIGPALPPVSDAKVKGYGSGLYQGEGEAIANFVQKGMRIPRRGEVGLTSKQIEDFESLGYVMSGSRHKRMNAIRIRKENQVYSAEEKKALSVINFEEKTQKEKKVMADMRRFLKSRISAAADAEKKEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALN9</accession>
    <name>A0ABV2ALN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Proteasome alpha-type subunits domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002001</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase T1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000608">
        <property type="protein sequence ID" value="MES1920318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000426">
        <property type="entry name" value="Proteasome_asu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003075">
        <property type="entry name" value="PRK03996.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10584">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00948">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasome alpha-type subunits" evidence="3">
        <location>
            <begin position="5"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="27884" checksum="9A7F16A744485814" modified="2025-10-08" version="1">MSRRFDRRTTEFSPEGRIHQLENAMEAISKGGAGVAILTKDGVVFAAERRITSKLIDFKTESEKMYRLDKHITCLVAGLQADANTLIDFARRASQNYRYTYQDDTPVEHLVKRVCDLKHSYTQFGGYRPFGASFLVGGYDQQHGFQLYETDPSGNYAGWKAVAIGSNSAAATGVLKKHFNAEFSLEKAKELALRALCRALDVTETPLDKVEIGQICKNAENDVKWTVLGPDEVRNLALRAEKSYDFGEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU0</accession>
    <name>A0ABV2ALU0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Zinc-finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001973</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000588">
        <property type="protein sequence ID" value="MES1920287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018866">
        <property type="entry name" value="Znf-4CXXC_R1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10497">
        <property type="entry name" value="zf-4CXXC_R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Zinc-finger" evidence="5">
        <location>
            <begin position="10"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF10497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20502" checksum="5C437DC42E627F8E" modified="2025-10-08" version="1">MDKDKMLGDKMGSSCHQCKSRRNKSVLLWCSSLNSSKQCKKKYCDNCLKKFYNQSIFNFTEVQQKHWKCPACENNCSCAACRRRISTMKNFKVVREVSVDHKIDEKFSIEDETNSEETEEKFSEYGDVFNLLYETAQNKGNRLKMIQVLADSKFDKDEKIKKISDILQEGIYLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM23</accession>
    <name>A0ABV2AM23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002366</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000826">
        <property type="protein sequence ID" value="MES1920726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11955" checksum="A79A1953CE5CF0AF" modified="2025-10-08" version="1">MHRISLSECVIFVNNSLQCHLLLISFLVFTEYHTRQPNTGSWESLFVSLFCIHNLTATGVNQLRLIHRSWSSDESQFQFRGLMKDLEFKAQKLGIFPKLQPKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM7</accession>
    <name>A0ABV2AMM7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Aurora kinase</fullName>
            <ecNumber evidence="8">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002533</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. Aurora subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000959">
        <property type="protein sequence ID" value="MES1920925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14007">
        <property type="entry name" value="STKc_Aurora"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030616">
        <property type="entry name" value="Aur-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24350">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE IAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="139"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="35"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="71"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="97"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU367134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="378" mass="44550" checksum="F46DA36004A62429" modified="2025-10-08" version="1">MDDLETPKKNKTNDSSDENSHKKPKIEEIRSLIDEMNESEDDYNDFDKNDNIRVQIEKTPVSFEDSAEETQILKENVKNEQKASDKTNSENVQKMPKNNENDEQTTDKKPKHKIDKNIETQKNYKSPSKKHRKWKLSDFEIGKLLGKGKFGSVYLVRERKSKFICALKVMFKSQLSKAKVQHQLQREIEIQAHLKHPNILRLYGYFYDEKRVYLILEYAAQGELFKLLRKLGRFEEKQASCYIRDIAKALHYCHKRNVLHRDIKPENLLLSLTGEVQIGDFGWSVQTINERRKTMCGTLDYLSPEMVDEKEYDKNVDLWSLGVLTYELIVGRPPFEAIDQKDTLSRIRKVHIRFPSYVSESAKDFILKVKFWSLFIQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR2</accession>
    <name>A0ABV2AMR2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002552</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000974">
        <property type="protein sequence ID" value="MES1920950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="79" mass="8757" checksum="C6169FCC0D1822A9" modified="2025-10-08" version="1">MRKITFVAVWTTRIIFAKLRFIKFALSVAVSAALVDTDSGIVFGTRTTAETGILAPTRTRANRFDFAFVAQTPFSSLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX7</accession>
    <name>A0ABV2AMX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002593</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001001">
        <property type="protein sequence ID" value="MES1920988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00066">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.400.10">
        <property type="entry name" value="GI Alpha 1, domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011025">
        <property type="entry name" value="GproteinA_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF193">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-8 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00318">
        <property type="entry name" value="GPROTEINA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00275">
        <property type="entry name" value="G_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47895">
        <property type="entry name" value="Transducin (alpha subunit), insertion domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="353" mass="40918" checksum="B5055A7F3375DC09" modified="2025-10-08" version="1">MGNCVGKQNRVDKETLLINKQLEKDRLESILEIKILCLGAGESGKSTLLKQLKSIYCRNEDLPQKAKQRYRDILHANVKDTMAGILNICQKMSLDMSEVEEEMVLMLDADSGELLSPEEASAVSKLWENESVRMAFDNKTSHYIPDSAPYYFDNVERFSRVDFEPTEEDIIMSRVRTTGMIITDFNIPPLKYKVVDVGGQRSERKKWLRAFDDVQAILFVVNLAGYNTVLFEDETKNRLIESLELFEEIITNNYFSGIPIFIFFNKKDLFEKYLKKESIKCCFPDYDGSNKTQEQMEYIEAQFRNKIVGDYAVKGVNFIAARFKKDVKYAFEDIKKTLVEMNQKQIDKALHKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN01</accession>
    <name>A0ABV2AN01_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA replication factor RFC1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002406</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000853">
        <property type="protein sequence ID" value="MES1920768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.272.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013725">
        <property type="entry name" value="DNA_replication_fac_RFC1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23389">
        <property type="entry name" value="CHROMOSOME TRANSMISSION FIDELITY FACTOR 18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23389:SF6">
        <property type="entry name" value="REPLICATION FACTOR C SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08519">
        <property type="entry name" value="RFC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="post-AAA+ oligomerization domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA replication factor RFC1 C-terminal" evidence="3">
        <location>
            <begin position="130"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="325"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="335"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="363" mass="41549" checksum="2D0B310035DD7F7B" modified="2025-10-08" version="1" fragment="single">FRPTVMQILPRITKITKIENIEISEKDLLALIGRADCDLRNILNCLEFWSSGENQNSAKNKDSSIGTWDAAAALFKPKNTGSAQFFEERSRYYFVDQMMVPLLIQENYLQHKLFGKNSFEKYVETSQILADSDLINKTIYSGQSFGLLPLHALLSCVIPAERVSGGQKPFRLQFPQWLGKNSNRNKNYRLCAAALRRIGKKMRCLNAKKFVADCSGALIRYISEPMIEKGKEGVEESIRRLVGYDLNKDDFDFMVANGAYENDKIVIETKAKSAFTRKFNSLNKTEILLMSEKTRKRKQPERTTKKLTKEGYEDDGFIVSSEIEESEDSFEIKSSRKRKTAVKKGKRSQKNGSKRRKPKSKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN35</accession>
    <name>A0ABV2AN35_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA topoisomerase</fullName>
            <ecNumber evidence="1">5.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002648</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the type IA topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001050">
        <property type="protein sequence ID" value="MES1921050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03362">
        <property type="entry name" value="TOPRIM_TopoIA_TopoIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000380">
        <property type="entry name" value="Topo_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023405">
        <property type="entry name" value="Topo_IA_core_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034144">
        <property type="entry name" value="TOPRIM_TopoIII"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390:SF20">
        <property type="entry name" value="DNA TOPOISOMERASE 3-BETA-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390">
        <property type="entry name" value="PROKARYOTIC DNA TOPOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01751">
        <property type="entry name" value="Toprim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00493">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56712">
        <property type="entry name" value="Prokaryotic type I DNA topoisomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Toprim" evidence="2">
        <location>
            <begin position="5"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU362092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16158" checksum="CB84D56C95F06943" modified="2025-10-08" version="1" fragment="single">MASNIALIVGEKPSVALSVAKALSNNNFQSKKSFATPIHEFTGSFQDKRTVFRCTSVTGHVLNIDFHPKYRNWTDTEPRELFTAKTEKNPADKNGKICKHLQIAAKNVKYLILWLDCDREGENICFEVIDQCRFSMVNYSPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN80</accession>
    <name>A0ABV2AN80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002469</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000904">
        <property type="protein sequence ID" value="MES1920843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="94"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="356" mass="41333" checksum="47B72200C82A57FB" modified="2025-10-08" version="1">MQNPVMRLKMAEEKVGKDRDNGRKTLNGGSADLSSKEGNIHRKTKSAFSSENGRPHKKIENPFCRQLQNKKIFEQKSKIHVKPKSQNKTKKTIKNSQTSTKTASKKGQSSFLRKSAKSKIFVQNNREIDKKAKSLKNFVGNSQNLLKASQNLQKSTSSDKFEIFVSKSLLRRPLTPDAKHFFCKFMKDLRWEAIQPCRVVDFSADAAGTKRLRSVCSRSEKRFSVETAARVFLEIELQMDGDVADLMERRWAEKIYSMFCLNKAHVLSAEQREKMPHEAFLETRFRNLYFRRTLLAAERILEKEKGLRLSRKAVFAVNLLEMLWQMGLRHREISTQSVKKISFFMWIANEAIKYRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANC5</accession>
    <name>A0ABV2ANC5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002555</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000976">
        <property type="protein sequence ID" value="MES1920954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF83">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="3">
        <location>
            <begin position="332"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="21"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="62"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="448" mass="52419" checksum="90A39F24E5C1601E" modified="2025-10-08" version="1">MAKNLKIRKRNKSFRKKSNIAKTNPRNPENQEMADQSNKSKNSEQNQKTSETSLEPTFNKNNEPREQLLKDQKERDQFSMRLLKKDLAKKQEAARRKITEQQKIAEEEENKRRGLLELTDSERKRFLPQTRELSRQVYLQKRKEQQLELARRKVEDEERFFAEEDLTAEEIAEHKQTKEAIRFAEEREKLAHIEEEQYYSIPKAKIDAASDKNKIDLDEERRKALNKRYKPRKHAESDQSLVESQKLEEAIHRNDKKFESFKTAENDLPLIEFGDEDEESKIRREILAGKEPLEDLAKEEEIGVEDLKKERKKTLEAVRKSLPIFSRKKDFLSLLEKQQILIVLGETGSGKTTQIPQYLAEAGYTKNGKKIGITQPRRVAAMSVAARVSDEMGTRLGREVGFSIRFEDCTSDKTIIKFMTDGMLLREFLGEPDLESYSCIIIDEVIYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM1</accession>
    <name>A0ABV2ANM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002813</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001199">
        <property type="protein sequence ID" value="MES1921259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="67"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16040" checksum="AA810CCCED4BC42C" modified="2025-10-08" version="1">MKNGENNKNGQKKPGQTQQNPILVDSDDYSVSPKKSFRENSEKIIVIEDPKNKFFNSQRNNKNIFTNKMNKNSLKSKNNLNKNAKFKVKKTETNTKGVNNKEVKINVKFAEIEFKTNLFSRKKENFKSVAKNLLRKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP78</accession>
    <name>A0ABV2AP78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003009</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001393">
        <property type="protein sequence ID" value="MES1921480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381:SF5">
        <property type="entry name" value="TR-TYPE G DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR IF-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14022" checksum="F9B8AF6B2280DE47" modified="2025-10-08" version="1" fragment="single">ETIEKQLKPKHRPEIIGEALIKQLFKSYVKNDHGVRSPIAGSIVTSGQLKKGLGIFILRNGKEIYRNDDGIETLRRFKDYVDEVEKGKECGVSLGSCLVHKEGDVIKGYKLVPLKREVLIVYKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP81</accession>
    <name>A0ABV2AP81_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N(6)-L-threonylcarbamoyladenine synthase</fullName>
            <ecNumber evidence="1">2.3.1.234</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003001</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>L-threonylcarbamoyladenylate + adenosine(37) in tRNA = N(6)-L-threonylcarbamoyladenosine(37) in tRNA + AMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:37059"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10163"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:73682"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74418"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.3.1.234"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.234" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001380">
        <property type="protein sequence ID" value="MES1921470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000905">
        <property type="entry name" value="Gcp-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017861">
        <property type="entry name" value="KAE1/TsaD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735">
        <property type="entry name" value="TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735:SF14">
        <property type="entry name" value="TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00814">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00789">
        <property type="entry name" value="OSIALOPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Gcp-like" evidence="7">
        <location>
            <begin position="30"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00048117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="13484" checksum="8A58AF8FD67CF81B" modified="2025-10-08" version="1">MSETVIIGFEGSANKLGVGIVTSSGKILANQRHTFISPPGTGFLPKETATHHRKHIFELIEKAFLESGLKPVDIDAIAYTKGPGIARPLISVALVVRTLSQLWRKPIVAVNHCVARIFIFAEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP94</accession>
    <name>A0ABV2AP94_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001114">
        <property type="protein sequence ID" value="MES1921157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="266" mass="31132" checksum="1D2FEC0C93062FCC" modified="2025-10-08" version="1">MNRNRNFYNPRNSLNATRPIPNLPQRTYYIHNTKSDLSSNNGQIFQINKSPVKSIRKIPFYEKGAKTNFSPNFNGRFSIRPNLRKIGRFNKYNFRTRNPISRRPLPNFENRINANPFNLNIRNNFILPPNLENNPIPTNFLRNNPKFGKNLPNQISHTIKKKAILPDFVPPPPKTKKIDKIEENTLILNFIENAKSKGSPALKFWVNKCQSIASGDNDLTIINKWIREKIMQYGEDYVNLENDHWEGLSLPYWLLYEAGNFLKAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APH9</accession>
    <name>A0ABV2APH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003114</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001506">
        <property type="protein sequence ID" value="MES1921582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19742" checksum="C7806E7054311D0B" modified="2025-10-08" version="1">MSDKKQNRNGFARHLHLRTYNFAAKTGIKRLSSFQVLARSGGHKVLRSQISLLEGKRLWEDFSITRLKNAKKKASNLAKELSSLRNLDSPRSFTKIVSVLGTNKNKYLVVRKHDKRNRFVKSWESVEKREIEKPLKIYEKIFESIEKENFESYCYFCRKESCFLDQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API7</accession>
    <name>A0ABV2API7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003126</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001530">
        <property type="protein sequence ID" value="MES1921595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21129" checksum="58FB6582A336FDC1" modified="2025-10-08" version="1">MWTTAIKKSRNPPENFYLHHPLVRNGEIQSIETDPNSLDEDALLNHAMGLSLADRVRKEWKNINRKKAFFQLRYLRHKLQTERRKNEFLVESVEQIAPQNLSAIELNMAQIELANPSPSETGSEMLFENEEEEVDTKIGQITQKAISDKMDRVSGESGLLEKGDKNVKNIDKMSLLEAGKGIVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT8</accession>
    <name>A0ABV2APT8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003221</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001635">
        <property type="protein sequence ID" value="MES1921691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046592993" evidence="1">
        <location>
            <begin position="23"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="26011" checksum="CFB9FBBD13CF17DC" modified="2025-10-08" version="1" fragment="single">TNFNKMNHFLITLLSLLNLYSSKYRISTIKYLPLGDEDQSSVVNALNDKKWELMFDGKNYDRIHVYFDLQDPFLITSTEILVEKECGRIDKITLSFSQRINGHYSDPVTINCTYPETSMKSKIRNKSQFIKMEIFRKSAVDVKTFIRKIAFYTNFDKRQIININATLLPVIGENNITRATKIIFEHNYKVKMAYFKREKNGKENKKLEDNFAIKVGAEGKDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ09</accession>
    <name>A0ABV2AQ09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003294</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001737">
        <property type="protein sequence ID" value="MES1921763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44196">
        <property type="entry name" value="DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44196:SF1">
        <property type="entry name" value="DEHYDROGENASE_REDUCTASE SDR FAMILY MEMBER 7B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23262" checksum="C6ED368726F78878" modified="2025-10-08" version="1" fragment="single">ESLFERIDVLHLNHGILENRFCLEYERGINWLHFQKINQCNYESHVRLLFISLCGLVASKIKPSVAVTCSGGVAGALPFDGSYVAAKSALRAYFSNFRREMCLVGHPINVTIMYPGATDTAFTRDHHGLKTKSVSPENLAKCFVRAVSEQKEEIYFPSNVWIASLIGYFLPSLYNLIVEKVFYLPNRPDCLGRLNEIKETLKKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ42</accession>
    <name>A0ABV2AQ42_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Calmodulin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002991</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001365">
        <property type="protein sequence ID" value="MES1921457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050230">
        <property type="entry name" value="CALM/Myosin/TropC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048:SF0">
        <property type="entry name" value="CALMODULIN LIKE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048">
        <property type="entry name" value="MYOSIN LIGHT CHAIN 1, 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="7"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="79"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00020786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16500" checksum="7EC1766325B18DF1" modified="2025-10-08" version="1">MDQYTQSQVSQFKEAFSILDVDKKGRIGSKELMSQFERMGRKVSEAEIEEIIKPFDVEAKNSLDFQQFLNLMKQGAFYDKDQEIKEAFDLFDVSEKGAITTKDIHSGLVKLGENMSMKDVQDIVDEIGDGKKVFFEQFKEMMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE4</accession>
    <name>A0ABV2AQE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003417</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001899">
        <property type="protein sequence ID" value="MES1921886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="11394" checksum="6D5536AFB44A569A" modified="2025-10-08" version="1">MYDRSPYIYFLEDVPCTIFKDIREIISGCCTGVVRSPYDYDFHGRLVDISRKMPYKGKLFQLSPHLHRLFRPLPKSMCKKCHESCTQYHYQIILR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE5</accession>
    <name>A0ABV2AQE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003217</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001631">
        <property type="protein sequence ID" value="MES1921686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="94"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="104"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13546" checksum="77591F3FE3741389" modified="2025-10-08" version="1" fragment="single">IIEKAINEGFVDKVIDDETIVKINHEKFEKELKKDYLTNFVAKETDIYSTCVVKAILELTAFPSLDDVEETPNFLPEKRKKSEKLEAANQRFPKFIKRKNRRGTHYENNNRRSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE6</accession>
    <name>A0ABV2AQE6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003402</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001874">
        <property type="protein sequence ID" value="MES1921867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021718">
        <property type="entry name" value="CPSF73-100_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11718">
        <property type="entry name" value="CPSF73-100_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term" evidence="4">
        <location>
            <begin position="3"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF11718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="14993" checksum="8D8C722E62B8D5E0" modified="2025-10-08" version="1" fragment="single">KQGFVIIEWMSGHHSDVVADSLISILSNAETLPSRQIAILTTKSTKETEKTFRLKSVKQNLEKILKAIFGEKSITKSKSNLIIKVDESVIAINSNLKIENCEKKDEKLYRMAEKVIKMCFDSFGIMKIDEKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ3</accession>
    <name>A0ABV2AQJ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003467</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001968">
        <property type="protein sequence ID" value="MES1921940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008081">
        <property type="entry name" value="Cytoplasmic_FMR1-int"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12195">
        <property type="entry name" value="CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="315" mass="36191" checksum="33BA0502DA59FFE1" modified="2025-10-08" version="1" fragment="single">EELDFHTDLNSLLEPKLEMMCDLKQYIDTSTDFVAEQIPLIFNGTDWQPSLIKEGMIFLVDVLMKASIVIGNNTSLSNDFTRLKRENQIFVDKFGGKNLVAQINSLQGFFSSANYIMEHLRDKIQSKQTHVSAITKMAICALDLIDSNKFFHPEEQTALIRFAIHSVYLTNSASYNVFKVKKKFVGRIKGVVQKNSFVPILNDINLSAKELIWSNAQSFGEKNYDWIDNSPELFSLVPGIEVIKRALRNYFMSLLPYMALKSGSIEKMNSQNQNEYFDFAKEVIELISRGFVMLSAIQNRIKKQFCYKLENRISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP8</accession>
    <name>A0ABV2AQP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002019">
        <property type="protein sequence ID" value="MES1921979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019188">
        <property type="entry name" value="SNAPC1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15131">
        <property type="entry name" value="SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15131:SF3">
        <property type="entry name" value="SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09808">
        <property type="entry name" value="SNAPC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="30954" checksum="17B4A274C6DD0EAF" modified="2025-10-08" version="1">MEYINFDLFEVASINDLTFKQFKSIWKEKKLHFLHLLRKNKELPSSFYGDIFKKLIQKWKSCKETKQKMIIIFILYVIYATQHSIRNDYVKIELPFNWKFIKTTMEIFEKENLHEPIRIFILMAKKAFFHFTLMSKNDDFSDRTTPFENKNEQILFDKRKFEKLRLSTKEYAENIQKNFAENKNGVLFADHEKFSGFDSHLRLNEKISKITENLMAIKRLKNLKKQKSKNKNLNFNFKETMSKYDEIRRNLNTPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT9</accession>
    <name>A0ABV2AQT9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002090">
        <property type="protein sequence ID" value="MES1922024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101898">
        <property type="entry name" value="NHL repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="21470" checksum="D40DBC58F9C78366" modified="2025-10-08" version="1" fragment="single">MFPSKFEKYVTAPDVDDVLHISRLTSGQVWVSDRNNIILTDTTGVKIHHFTKRSDISYGVHTVTSAGNLIYIDSDDNINKLMADRKTHVRIRNATDWKPHCVYSSPSTGDLLIGMSKLEIKTHSMMKKIKITRNDRTGKHVLTIRGDSSQKLCDNFSYITENRNGDVLVSGTFVTAVDLEGRYRFSYTGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW2</accession>
    <name>A0ABV2AQW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003568</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002147">
        <property type="protein sequence ID" value="MES1922051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="16554" checksum="7750238EC8AC9475" modified="2025-10-08" version="1">MAETAFSEKEQRETNARFREYIEWARKNDEIEDIRPAEEVTAFEAAKERYLEIDVKRRLKLRKLFKLRRKFRKEALEALPPRLRLAAIQPFNDDKRKFRFYPLQIYPATERQLLPNDLEKRKRLWHLDKSFDEAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQW4</accession>
    <name>A0ABV2AQW4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NADH:ubiquinone reductase (non-electrogenic)</fullName>
            <ecNumber evidence="2">1.6.5.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003452</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a quinone + NADH + H(+) = a quinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:46160"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>a ubiquinone + NADH + H(+) = a ubiquinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:23152"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.9" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001946">
        <property type="protein sequence ID" value="MES1921924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054585">
        <property type="entry name" value="NDH2-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706:SF47">
        <property type="entry name" value="EXTERNAL NADH-UBIQUINONE OXIDOREDUCTASE 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="NADH DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22366">
        <property type="entry name" value="NDH2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="External alternative NADH-ubiquinone oxidoreductase-like C-terminal" evidence="9">
        <location>
            <begin position="86"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00049010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF22366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17271" checksum="41198931643B7A55" modified="2025-10-08" version="1">MIPFIEKLDFKKNERNKSLMINDKNNVMSKDGKSYTNIFALGDCAFNPNSPLPPTAQVAQQQAYWLCKEMNKMKNRKDFEPFKYVHKGTMAYIGGKDALVDTKYGSFSGISGWLFWNSVYLSKQFSLKNKISVPVHWGINHLLGRNMCQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR03</accession>
    <name>A0ABV2AR03_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003628</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002236">
        <property type="protein sequence ID" value="MES1922113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="9903" checksum="2D32046AC090FDEA" modified="2025-10-08" version="1">MASESQKISQGYQKLIIDVLKEKGGSCSYEELVKEAEKQHCDSLGAMLKILKNKNVITFSQVFLMYPMHKDEIVTLLSSDFDPFNDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR32</accession>
    <name>A0ABV2AR32_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Condensin complex subunit 1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003609</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002202">
        <property type="protein sequence ID" value="MES1922092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026971">
        <property type="entry name" value="CND1/NCAPD3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032682">
        <property type="entry name" value="Cnd1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222">
        <property type="entry name" value="CONDENSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222:SF2">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12717">
        <property type="entry name" value="Cnd1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="4" id="KW-0226">DNA condensation</keyword>
    <keyword evidence="3" id="KW-0498">Mitosis</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Condensin complex subunit 1 C-terminal" evidence="8">
        <location>
            <begin position="30"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="251"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="31383" checksum="312BE02F0F0106B8" modified="2025-10-08" version="1">MCISKKFCFDNLPILFKIMESERDSLLMTNSIISLGDIASRFPNLAAPHISRMFAPLHHAEMSVRKNTLLVISHLILNDMIKVKEFISEIALAVTDEKKSVRDLAKLFFQEFSKKGKNPVYNVLPDIVSKFTHDKVEKTVFETVLKELIRYISEEKQQENLIIKICSRFSKLKDDQHILNNVYCLTLLNYGEKCIKKLIEMSRTYKGLLGEEKVFEHFKSIVVKAKKSAIKQEVKEMILEFEKTVLAKSHLAENSEEETPKDRIDENVENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR40</accession>
    <name>A0ABV2AR40_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UBA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003648</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002262">
        <property type="protein sequence ID" value="MES1922135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00165">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBA" evidence="2">
        <location>
            <begin position="33"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8295" checksum="1B27B22EB8902FD0" modified="2025-10-08" version="1">MASSNLSTNPRMNTAPTGATINNPTNEEIDWEKRYESELDQLKNMGFTDKERNIALLKQTNGNVSVVIDRLLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR66</accession>
    <name>A0ABV2AR66_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Isopropylmalate dehydrogenase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003691</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the isocitrate and isopropylmalate dehydrogenases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002340">
        <property type="protein sequence ID" value="MES1922175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.718.10">
        <property type="entry name" value="Isopropylmalate Dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004790">
        <property type="entry name" value="Isocitrate_DH_NADP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11822:SF21">
        <property type="entry name" value="ISOCITRATE DEHYDROGENASE [NADP], MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11822">
        <property type="entry name" value="NADP-SPECIFIC ISOCITRATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53659">
        <property type="entry name" value="Isocitrate/Isopropylmalate dehydrogenase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Isopropylmalate dehydrogenase-like" evidence="9">
        <location>
            <begin position="39"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18923" checksum="7DB9681A90E142C9" modified="2025-10-08" version="1" fragment="single">MVYNISRNLQKFGNKSLQNANLRFFNTTTPKIQVKGSVVEMDGDEMTRVIWAAIKEKLIFPHLKMDVKYFDLSIENRDKTNDQVTIDAAHAIKKFGVGVKCATITPDEKRVEEFGLKKMWRSPNGKIRGILNGTVFREPIICNNIPRLVPGWKKSIVCGRHAYGDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR90</accession>
    <name>A0ABV2AR90_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phospholipase/carboxylesterase/thioesterase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002360">
        <property type="protein sequence ID" value="MES1922185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="155" mass="18131" checksum="E0798FDD56EB0109" modified="2025-10-08" version="1" fragment="single">MAKIPLKEEMPSNLQNFETFCNSDNPRHLLIIFHGLVYNKTQFSLFRLNFNNFFLIWRIKKGDNTKNYISLAKKMQLPKTCSIALNAPEALPFGLGFSWFTSFDAEANLIKPEAFEERRISSLAQTRIFVFDFLKVLVDKCGWKERNIYFLGFSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD4</accession>
    <name>A0ABV2ARD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003493</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002003">
        <property type="protein sequence ID" value="MES1921968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17959" checksum="4F1B1A34AA65B332" modified="2025-10-08" version="1" fragment="single">MEIDLHFYKTHPLFNVQTLEMLEDEMFEEALIEHKNTKNEEKSSENRQKTFEDDLNGKNTEELSGDFREIFENATSFEDLEPMEPGELVKTELLVHQKIGLHWMVKREERKKDKSLFWKKVETADGFTFWTNEITNVKLSKMPEEFRGGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH8</accession>
    <name>A0ABV2ARH8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003664</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002284">
        <property type="protein sequence ID" value="MES1922149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="197"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="248"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="31809" checksum="2482506B128F580D" modified="2025-10-08" version="1">MLTYFLTDHWEFTIFSIFMINLVAMGPLILVTPPVTFLSILILTAYFLIYIYGIYTKGHKAGNLENNNFLFLQIATNCFVITSLPVFYVAFEHTAIDETLRKVILCFYALSPALIVLINFAFHPKQNSPKEKPVKIAMMTSLLVLSLPVEIIKCVLSKDLHYKFFVIFSSVLLMALFILKYLSAVANKVEKCIKSEVLNYCIRFAHIFSIASVITVLANNFDDSAKLLLLMPIEAYLLVTMMSHVENAHLILLFISVLVLGKIYNGEEELTIKDLFLYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM2</accession>
    <name>A0ABV2ARM2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003533</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002079">
        <property type="protein sequence ID" value="MES1922012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13724" checksum="15866F85CF315290" modified="2025-10-08" version="1">MLVFATSGTATVPEVAKTLQFIAYEVTDNLHFKLIADEDGEYPEYLVTKAILGSALRCAAVDVENNLTKKLPVSATETVKENNILHMTIKAFEFLLKSVSMFCYFPNLKFYIDCNCSYMTFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS23</accession>
    <name>A0ABV2AS23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Exportin 7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">XPO7</name>
        <name evidence="8" type="ORF">MHBO_003762</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the exportin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002471">
        <property type="protein sequence ID" value="MES1922256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044189">
        <property type="entry name" value="XPO4/7-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596">
        <property type="entry name" value="EXPORTIN 4,7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596:SF2">
        <property type="entry name" value="EXPORTIN-7 ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="27305" checksum="5FF7FC3CE9703651" modified="2025-10-08" version="1">MMEITFRMLSGNYIPFGSFEFYKDNTLKEIVSSVVNLVLSIPIETIYSYPKMAAIHYSLIETLFEKHIALVCDFTEDIFNKIFVTVCDGVQSTNSNHSVKAANSLDHLCLYIIDNQSKTRKPDNFEKLLKQMESQIDRLMKLTSDVFQLVLFDNCNNQFSLTRTLCSVFVFKPVLLQFFAKALLEAQPTETANQLKDNFEQLVKFVQTGRVSGSMRDKFNRTVISIKMISADAAIVPVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS66</accession>
    <name>A0ABV2AS66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003718</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002387">
        <property type="protein sequence ID" value="MES1922207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13296" checksum="9F602411D6B4C83B" modified="2025-10-08" version="1" fragment="single">MNFLEKKKKQREAKKMKKNIREIRRYINRIEREIHRMEIGEKKTMAQLKTAMNKRDDSSTRTIAKQITTARKDRAQLNNTKLYLGNIMNKLQTMQATVNTSEVLENVSKNLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA6</accession>
    <name>A0ABV2ASA6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phosphatidylinositol N-acetylglucosaminyltransferase subunit H conserved domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003839</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PIGH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002601">
        <property type="protein sequence ID" value="MES1922331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044215">
        <property type="entry name" value="PIG-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019328">
        <property type="entry name" value="PIGH-H_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15231">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15231:SF1">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10181">
        <property type="entry name" value="PIG-H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphatidylinositol N-acetylglucosaminyltransferase subunit H conserved" evidence="4">
        <location>
            <begin position="91"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="21375" checksum="19417895B2C518FD" modified="2025-10-08" version="1">MDSNKQFYKLRGLELQIKTFSDEFSSIELIDKKKIFNNFDLFAFLFFVLASMYVYLYVEKLSSVVIVLFLCSLPASFVVIDKRNYTLKEEMLILENHGLQINRYKRKNEPFKSVFISWDQIEDVLINEGINFYKYFYYVAIVVREKDGSKSVVIPFETFNAKIEILMEIWKDLRCKIGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB3</accession>
    <name>A0ABV2ASB3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004041</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003023">
        <property type="protein sequence ID" value="MES1922527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007081">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04998">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="3">
        <location>
            <begin position="1"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="163"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="163"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="176"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="196"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="27902" checksum="E4922A773D259EA4" modified="2025-10-08" version="1" fragment="single">MTLNTFHLAGHGGANVTLGIPRLREILMTSSGNIKTPTMDFGFIGNSLRPELGRKFVVKFSTLYFSSIIKSVTCLEKTGKSFRRFNISINLLNFANKIKWETLKRKITRSFVQLLLIELEKIVSKSAFNDDIFRSKSRKGHKENKIDDAETFFIDESGDKIDDETDEDTEIEFEGDVERGNRKMEKSDDSISSESFDVEENDESEETNEMKKRKANDRFLEKIIFEKKKNRVTIKIKMSSEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI7</accession>
    <name>A0ABV2ASI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004117</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003185">
        <property type="protein sequence ID" value="MES1922602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="26983" checksum="27F2EBE4B259D757" modified="2025-10-08" version="1" fragment="single">KALSDEQKKRAKELKKEIEKEARANWNKRDRDSQQRIADISALESKTSPTTQFMAGLVSAFGGDVSTKKTQEFIQSRPDLESYFPETQDNIASAKTQAPGTYMAGRVGGELAQYAGAAKALGAIPKVGAALKSGSAAKRIGAASAVALPVDIAQAGLRAETPKEFAQELALNVGLGVAGGAAVEGVGAGVRALRGAGVRLPRARRPVAEAVPETPTVSPENRTVREYVSEARGILKRKFVDAGDTVNKIAKITKDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ8</accession>
    <name>A0ABV2ASJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004054</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003056">
        <property type="protein sequence ID" value="MES1922539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="276" mass="32045" checksum="E4518C824CBF5D36" modified="2025-10-08" version="1" fragment="single">LYSITNTDLKLFGENKNGNFEKDKIKIIVLLSRLIEATPKIEEKQQIFNIFARFPVPEILPILKPLIFNCSDSAISSLENLYRNYENSNPQEKKNFEGLFKVATSTPKIPELQKIGNFIKNGDFWKAIFQRYRKMANSELKFKVALKANRFYENDKSQQKNEQMFIETIRIAIRLGKNGFAIALLSKHYKNSFFELTKLFLESVSKSDSFEILEIESWGRAQNAITRILEKMARTEPIENFTTRIEINKNTKNMVQTFGPYGALIYNSVLSNNKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL8</accession>
    <name>A0ABV2ASL8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA ligase 4, variant 2</fullName>
            <ecNumber evidence="3">6.5.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lig-4</name>
        <name evidence="3" type="ORF">MHBO_004169</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.1" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010003330">
        <property type="protein sequence ID" value="MES1922652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003910">
        <property type="term" value="F:DNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.30">
        <property type="entry name" value="DNA ligase/mRNA capping enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012310">
        <property type="entry name" value="DNA_ligase_ATP-dep_cent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029710">
        <property type="entry name" value="LIG4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45997">
        <property type="entry name" value="DNA LIGASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45997:SF1">
        <property type="entry name" value="DNA LIGASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01068">
        <property type="entry name" value="DNA_ligase_A_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56091">
        <property type="entry name" value="DNA ligase/mRNA capping enzyme, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50160">
        <property type="entry name" value="DNA_LIGASE_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-dependent DNA ligase family profile" evidence="2">
        <location>
            <begin position="42"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22503" checksum="E5D0E19352AA31A1" modified="2025-10-08" version="1" fragment="single">PKFSCVLDGEIVVWNNIQNKFESFGFNKFAAKTYRKPQNANNENNENSLRFIAFDIIYKNGHFLTEKPFFERRKILEKTIKTAENKIFVAKQTVFENKISKIALLKLLERFLNESLEGIVLKNMKSEYLCNDRSKNWIKLKPDYVETIATDLDLIVIGFCCVLFSAILNNFSIFQKDVLSERMEMLANYWSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR9</accession>
    <name>A0ABV2ASR9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Phospholipid/glycerol acyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">MHBO_004241</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003497">
        <property type="protein sequence ID" value="MES1922716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07991">
        <property type="entry name" value="LPLAT_LPCAT1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045252">
        <property type="entry name" value="LPCAT1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23063:SF2">
        <property type="entry name" value="GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4, ISOFORM D-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23063">
        <property type="entry name" value="PHOSPHOLIPID ACYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69593">
        <property type="entry name" value="Glycerol-3-phosphate (1)-acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="11" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="32"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="67"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="Phospholipid/glycerol acyltransferase" evidence="14">
        <location>
            <begin position="96"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1922716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="30268" checksum="EBFFBF0558F6247B" modified="2025-10-08" version="1">MPVNRWNWNFYLSILYSFGVIIRYLILFPIRLIILIIAFIIFLLSNFFIASIPIFSKQKKSFLRRKLAVFLAISFAFSWGSVVKFHGELPEYETNQIFVCNHTSMIDYLLLLQKAPFAVLGQMHGGWVGWMQKNILKETIGAVWFERDLPNDRKKTLEKIKQYIQTKSSEKSRLLIFPEGTCVGMKHCIQFKKGAFGMEAIICPIAIKYNEYYSNAYWNSRKKSFARHLFELMTSWAVLNIKIEARLRRLFYGAGEEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV0</accession>
    <name>A0ABV2ASV0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003515">
        <property type="protein sequence ID" value="MES1922727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="25768" checksum="B9635487A604BE2B" modified="2025-10-08" version="1" fragment="single">FLIKSSIESGGKQIKRVKKSINATKLDLSGHKRISLVSNKGVEERNERDKKDFVKASLNVKKEYYDQLAKKRFKGKNHFLVNFEEKEEIKQPKKHYFETQIENAENFKKESEQINEDESTDEELIRKDEEKAMKGIRRMNRQIRKIRKNDFQNTTNNKKFEEEVEEKNEELLDEKLLKMKVKEKFGEAKRKRDLENLRNEKRLKMAFDLLQKGEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV1</accession>
    <name>A0ABV2ASV1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Pyrroline-5-carboxylate reductase dimerisation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004263</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003553">
        <property type="protein sequence ID" value="MES1922740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3730.10">
        <property type="entry name" value="ProC C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053790">
        <property type="entry name" value="P5CR-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029036">
        <property type="entry name" value="P5CR_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11645">
        <property type="entry name" value="PYRROLINE-5-CARBOXYLATE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11645:SF0">
        <property type="entry name" value="PYRROLINE-5-CARBOXYLATE REDUCTASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14748">
        <property type="entry name" value="P5CR_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="6-phosphogluconate dehydrogenase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00521">
        <property type="entry name" value="P5CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyrroline-5-carboxylate reductase dimerisation" evidence="2">
        <location>
            <begin position="1"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="10974" checksum="79F34ECA9B1E8659" modified="2025-10-08" version="1">MDPITGLSGSGPAFVFMFIEAMSDAGVKRGLSRPVALELAAQTCFGSAKMFLETKKHPGELKDMVTSSAGTTIHGVDVLEKNAFRSAVIQAVDAATNRSEELNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV4</accession>
    <name>A0ABV2ASV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004282</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003609">
        <property type="protein sequence ID" value="MES1922761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43086:SF2">
        <property type="entry name" value="HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43086">
        <property type="entry name" value="VERY-LONG-CHAIN 3-OXOOACYL-COA REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="29"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="10094" checksum="B457AF2CC9079858" modified="2025-10-08" version="1" fragment="single">WAIVTGATDGIGKALAFELAKRKFNLLLLSKTQDRLEDVKSEIESFTKDVEVQTKEIDFSSFGDSEANDLLEMIKPYKEDIGILINNVGTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT04</accession>
    <name>A0ABV2AT04_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-dehydrosphinganine reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">TSC10</name>
        <name evidence="2" type="ORF">MHBO_004327</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003772">
        <property type="protein sequence ID" value="MES1922803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43550">
        <property type="entry name" value="3-KETODIHYDROSPHINGOSINE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43550:SF3">
        <property type="entry name" value="3-KETODIHYDROSPHINGOSINE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20616" checksum="01A4EEF7E2B4897A" modified="2025-10-08" version="1" fragment="single">MNLNYFGTLNITKSFLPKLLESQRKNHVVFVGSTLSLMALPGYSDYTPSKWALRALCDTLQMEFQSSNISFHIFYPPNMDTPGFTEEQKRKPEITKFIEGSIKVVSAEKAAKECLEKMEKGVYAIKMDFLTSILYRKNSVAFPRRDLGEWLLDLVLVSMSFLVETFIYVYCHFVFAFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT79</accession>
    <name>A0ABV2AT79_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Trafficking protein particle complex subunit 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">TRAPPC3</name>
        <name evidence="8" type="ORF">MHBO_004218</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Golgi apparatus</location>
            <location evidence="1">cis-Golgi network</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAPP small subunits family. BET3 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003453">
        <property type="protein sequence ID" value="MES1922694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.20">
        <property type="entry name" value="Trafficking protein particle complex subunit 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016721">
        <property type="entry name" value="Bet3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024096">
        <property type="entry name" value="NO_sig/Golgi_transp_ligand-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007194">
        <property type="entry name" value="TRAPP_component"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13048">
        <property type="entry name" value="TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04051">
        <property type="entry name" value="TRAPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111126">
        <property type="entry name" value="Ligand-binding domain in the NO signalling and Golgi transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="7" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="19076" checksum="E2CC5523A6BA2FAC" modified="2025-10-08" version="1">MAKEETAKILKKTGTISADLFILTYGSLVIEIIKEYDDNIALVNHKLFSIGENMGKRMCEEFLLLSENQNCSSFKESVDVIAKTALKVYLGTTAEVKKTENPNVFVMFLEHNPLEKYLNLPESKADLVYSNVVPGVIRGALSAIGIQVDCRIDFEQTKKTGETIIIVNKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT82</accession>
    <name>A0ABV2AT82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Calponin-homology (CH) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004113</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003171">
        <property type="protein sequence ID" value="MES1922597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.10">
        <property type="entry name" value="Calponin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001715">
        <property type="entry name" value="CH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036872">
        <property type="entry name" value="CH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050540">
        <property type="entry name" value="F-actin_Monoox_Mical"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23167">
        <property type="entry name" value="CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23167:SF46">
        <property type="entry name" value="EPS15 HOMOLOGY DOMAIN CONTAINING PROTEIN-BINDING PROTEIN 1, ISOFORM F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00307">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00033">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47576">
        <property type="entry name" value="Calponin-homology domain, CH-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50021">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calponin-homology (CH)" evidence="1">
        <location>
            <begin position="2"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="30102" checksum="5269C617F20728EB" modified="2025-10-08" version="1" fragment="single">AENAKESLLKWTKNSLTKKIYEKVKIDDFGKSWSNGLAFCALIHQFNPKSIKFEKLSPFESDANIRLGIYATNVLLNFDDLLNFNNYTESTENGKILIVSELYSAFKNAPKMGISKEIITETIDVVREIKNCETKTKAKSSILGEKLRNVRSKLKEHVSKLPNSNLEETKEALRTTKELGNLRKEIFDLEKNFYSKFLCSLKVDSEKILRESQKDIGESDYFELFNESKNLGREIENYVFRKQGEEQETAKAFIFFKLQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB4</accession>
    <name>A0ABV2ATB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tyrosine specific protein phosphatases domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004007">
        <property type="protein sequence ID" value="MES1922911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.10">
        <property type="entry name" value="Protein tyrosine phosphatase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050561">
        <property type="entry name" value="PTP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000387">
        <property type="entry name" value="Tyr_Pase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23339">
        <property type="entry name" value="TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22785">
        <property type="entry name" value="Tc-R-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52799">
        <property type="entry name" value="(Phosphotyrosine protein) phosphatases II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50056">
        <property type="entry name" value="TYR_PHOSPHATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyrosine specific protein phosphatases" evidence="1">
        <location>
            <begin position="93"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14322" checksum="CDFC83D82B114E3A" modified="2025-10-08" version="1" fragment="single">MVSQQDKISFSSSTDPHIFEESVGKKKIRFLVTQTPTAGNKKDYLKLFKQNNVSFIVRTCSPFYEKSYFVEAGFQFQDLVFSDDAFPSNSIISRWLKIVDIAMKAKSGSPIAVHCVAGHGRSFLLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL3</accession>
    <name>A0ABV2AUL3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_004704</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004926">
        <property type="protein sequence ID" value="MES1923159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050629">
        <property type="entry name" value="STE20/SPS1-PAK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48012:SF10">
        <property type="entry name" value="FI20177P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48012">
        <property type="entry name" value="STERILE20-LIKE KINASE, ISOFORM B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="122"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1923159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="16820" checksum="D38DC7D02E2A3322" modified="2025-10-08" version="1">MAPEVISENAYDSKADIWSLGITAIEMATGSPPFYNIKPEHAVLVIPRKPAARLPGKFGWKFRDFVKKCLSKDPKERPSASELLRHSFIRSAGSKTVLLKRLFDDSIDKINTFRANLYKNANSAGKSSAKESDVSATVRVNKSKTTEESRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ0</accession>
    <name>A0ABV2AUQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidase S1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005942">
        <property type="protein sequence ID" value="MES1923386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="84" mass="9258" checksum="51E7EA31C3902E3B" modified="2025-10-08" version="1">MFFNQYVVSHTDTLGFASQGFANSGDSGAFAFQCVDRDHGKKSFACFGMVVGGTRDNYVLVTPIRDVLDALHLENVKKLCTFED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR7</accession>
    <name>A0ABV2AUR7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Translation initiation factor eIF2B subunit delta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">eIF2B GDP-GTP exchange factor subunit delta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_004967</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the eIF-2B alpha/beta/delta subunits family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006014">
        <property type="protein sequence ID" value="MES1923401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="entry name" value="Translation initiation factor eif-2b, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10233">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10233:SF14">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00044147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00044356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00046432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1923401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="18958" checksum="CB42919EBCD7602C" modified="2025-10-08" version="1" fragment="single">MNRILSRMSVKEAKPELIKFLDNFLQDKIVVAQEKIIASGEKLVREKDVVLIFGNSQKIIQIICISKPKQVVYVSRGNIGEDEEDLKILSDNKIECLLININAIPNYIRKVDKVLIEAFAVFSNGATLAAIGSAMVGLVANEQKIPVIVCCESFKLTDRVQLDPIVFNEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU6</accession>
    <name>A0ABV2AUU6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serine hydroxymethyltransferase, cytosolic</fullName>
            <ecNumber evidence="4">2.1.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SHMT1</name>
        <name evidence="4" type="ORF">MHBO_005008</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010006196">
        <property type="protein sequence ID" value="MES1923436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049943">
        <property type="entry name" value="Ser_HO-MeTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680:SF35">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Serine hydroxymethyltransferase-like" evidence="3">
        <location>
            <begin position="2"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="18845" checksum="18799688F3B378DE" modified="2025-10-08" version="1" fragment="single">IAVQLKRVDTEDFVSYSENVIKNAKKLANELIRRCFSVFGGGTDTHLFLWNCKKSGLSGNVLEKYYEKVGIFVSRNKIPGDKDESSVSGLRVGLAALTTRGMTERDIVVLADFLEEGFYNAKILAMEIGENELMDILKNGQINNIDAKFDSLNERVKTFANKFNAPGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV06</accession>
    <name>A0ABV2AV06_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005046</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006340">
        <property type="protein sequence ID" value="MES1923469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="71"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="95"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14952" checksum="7C484B1A47CCD8B6" modified="2025-10-08" version="1">MYVWKPTKRNQYKNISDLRLEGGRLGINSERSDSYSENSEKDSDIELMIRKKKKMAEKDGDDSKDDENNEDSVKNKEEVQNKEEQNKDSLNIDEKDVEEDSDDTDDLIKLNGISVDEEEDEEPASLTKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV25</accession>
    <name>A0ABV2AV25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005088</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006539">
        <property type="protein sequence ID" value="MES1923507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12370" checksum="25A7C9B7C78F27DB" modified="2025-10-08" version="1">MEHLTYKDNKNLIDYICDNFLSLSKGKYESFVVENLIKANNDNEIKLKIEQAILDNISEMIKNIYSVYVFRTYSKQLNNSAKPINHLFETGFEINSSMPSRTLVRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE3</accession>
    <name>A0ABV2AVE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004912</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005758">
        <property type="protein sequence ID" value="MES1923348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15785" checksum="2CAE009049FC8161" modified="2025-10-08" version="1" fragment="single">MSNHTKLFLDCDLNQKDVSTITIKKPVCEIGPLLHVVQTCFNYNDKFFSEECEASCKENFVHSELGLSNFKVKCMPFGRTTDFICVKIDVCMPPKIVGEYSDSISIDCDDEIKDYCIVTAGEGDKLFFEKSQSRQFNVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF6</accession>
    <name>A0ABV2AVF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005274</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007479">
        <property type="protein sequence ID" value="MES1923656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="10214" checksum="7BABF470044374B7" modified="2025-10-08" version="1" fragment="single">EIGTVLRAGDFLAKGVEHKGCASYVNVAVRQQNVFDDSDEEFRYIDPSVFLLKRFPVPQWKQHCNDYSFEQKGQVADEGDASAHPNSVHSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVU7</accession>
    <name>A0ABV2AVU7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Inositol polyphosphate-related phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005139</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006831">
        <property type="protein sequence ID" value="MES1923549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000300">
        <property type="entry name" value="IPPc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22669">
        <property type="entry name" value="Exo_endo_phos2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inositol polyphosphate-related phosphatase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16575" checksum="38730622CAD358ED" modified="2025-10-08" version="1">MICNENLNVLRLHDSLTKEIKNRGAFYNSKEPIPLDNFFPTYKKIERRPENFDSTDLEKHYLTVFKKPWYKRSMVVEKIPAFTDRIFVHSMNCFADDVVPVQSEDGRHQYGCFEPDFVGSDHSPIFALMNIKFLLLDFEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWD0</accession>
    <name>A0ABV2AWD0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005167</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006941">
        <property type="protein sequence ID" value="MES1923572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43977">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="17927" checksum="EFB783883B2A14DF" modified="2025-10-08" version="1" fragment="single">MNRVQSFFQSVHLNINNPHFLIMQGKITKVLAMKPLEILSMVEVAAGTKVSELKRNSAKRVIKREATKLAEIDRTLNTEITPLLEKLKKQKEHYLTWSSNNTEMERLRRFRVAFAYFRSARAVGEQREGRELLQGRLEECEREVLELTAAVKSGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ADY6</accession>
    <name>A0ABV2ADY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">MRG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000004</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.274.30">
        <property type="entry name" value="MRG domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008676">
        <property type="entry name" value="MRG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038217">
        <property type="entry name" value="MRG_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026541">
        <property type="entry name" value="MRG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053820">
        <property type="entry name" value="MSL3_chromo-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10880">
        <property type="entry name" value="MORTALITY FACTOR 4-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10880:SF15">
        <property type="entry name" value="MSL COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05712">
        <property type="entry name" value="MRG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22732">
        <property type="entry name" value="MSL3_chromo-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="MSL3 chromodomain-like" evidence="9">
        <location>
            <begin position="21"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="MRG" evidence="8">
        <location>
            <begin position="233"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="152"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="155"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF05712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF22732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1917966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="319" mass="37139" checksum="28C13F57827A651F" modified="2025-10-08" version="1">MAGGDKTNVLSEMKCEKMFGIKEKVLVYFKGALYDARILKKNGDKRFKVHYLGWNKRWDENVDVSRIFPFEKEFEEIRDKIEKGQIPLQKEIGIGRTKNKKLEKKSAFSHINRERRSNVLYNKEDKKISNLSEEKRKTTIETQKSEITDVLRQMDSNKDKKQNVEKRKKPNGESLKNFGHPSRSLASIKSIREAHITFSPVFRRIVGSDFVRAGEKQAPHFPANAFTVSSLLERTNLNREQKKELANLFDQLMPEMLLFDFEKKIYLREAAALNFKASQVYGVTHLFRLLGLLVILSADIHFFVGTLFDRENRVDFLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE74</accession>
    <name>A0ABV2AE74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000059</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="19345" checksum="6727CF47C7E97084" modified="2025-10-08" version="1">MFFTAALSFLFQAGSAVLIFLLIFNQNWAIAETGFAVYRLGLRGYTESTKELNFTESYNYTDPNYFCAGNCDKFSLGNRVILIILSICLVLLLVITTCQVLILCWNLPVKWVLRFINLLLVLSVITTIILYEYMCFRSISLTYSTKRSINYYLGGGLVGALILNGIFSDFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEE6</accession>
    <name>A0ABV2AEE6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Succinate dehydrogenase cytochrome b556 subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000115</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1300.10">
        <property type="entry name" value="Fumarate reductase/succinate dehydrogenase, transmembrane subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000701">
        <property type="entry name" value="SuccDH_FuR_B_TM-su"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01127">
        <property type="entry name" value="Sdh_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="Fumarate reductase respiratory complex transmembrane subunits"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0349">Heme</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="69" mass="8011" checksum="ACBC411874B5C1BD" modified="2025-10-08" version="1">MHKHKSLLYSAQFALVAPFVSHFLSGVRHIFWDRFAMGLDNYWVGLTGRAIVFTVIVFTLAIIWSNREK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEQ9</accession>
    <name>A0ABV2AEQ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">fructokinase</fullName>
            <ecNumber evidence="5">2.7.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000203</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>D-fructose + ATP = D-fructose 6-phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37721"/>
            <dbReference type="ChEBI" id="CHEBI:61527"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.4" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000026">
        <property type="protein sequence ID" value="MES1918195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051804">
        <property type="entry name" value="Carb_Metab_Reg_Kinase/Isom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049874">
        <property type="entry name" value="ROK_cs"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42742:SF3">
        <property type="entry name" value="FRUCTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42742">
        <property type="entry name" value="TRANSCRIPTIONAL REPRESSOR MPRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01125">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00038887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00048451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="20855" checksum="6D2161BB857B5CA2" modified="2025-10-08" version="1">MTDRHSALDSCVYITIGGGIGVGLSYKKSPFVGLSHTEGGHFKPRRYVNRVGETDDFEGTCDYHSDCVEGLSNAPSLAKRLGIEVDDLATVEDDHEIWDLFAHYIGELCATVVYMICPEVIVLGGGVMKRRSLFPRIRAKVLESLSGYIRLPRIIGLAFNDYAQKTVSTVTLCQRSMTTTLREWSDLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER4</accession>
    <name>A0ABV2AER4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000177</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045237">
        <property type="entry name" value="COPS7/eIF3m"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15350">
        <property type="entry name" value="COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15350:SF2">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="408" mass="46577" checksum="1E45AD1A4408EE1B" modified="2025-10-08" version="1">MSLIYLKAPKTTHKDVLTYVLNKLSAAVPNDLKLESKNTIYEKLDLLLKFLAEKIALLPSDFLDSDDLIDMLLLLVEDIDSYDERSNLLLQVLRVVYLSNSNVENKVLNFGKVLCLNKNDKETQIKIIYFPLRICCETKRGDLVKQSLSDLLNTDFDTNQFFEAQSALYYASCISHQMTRKNQFDHYQDKFHKKYLKLASDYFKNDESEMTGNMANVFYSNLYVVAKNAVSDWIRCGKSADLTLFKLVETAAENMTSLPVKEKLAKMSDFLSIISSGDYNALFSFKMENKTFFTDLNANGDGCLKKFRLMSLGDMSKRADESGRVSFDSVKKEFLIMNDNDVEIMAIKGIKNGYLKARIDPIDRFLIFPVGEESSEEQSLMDIEANLRKLRSSISETVAPLSNAFTKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF59</accession>
    <name>A0ABV2AF59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000043</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="693" mass="80858" checksum="EEA18BC1A38C0719" modified="2025-10-08" version="1">MDDYEEMETLSVYSAKNCSLIIKLNKFGDIVYSFWNSKANRHLTKYIEMLQECPMMSFYTDTSIKNKETTVTFCSNTYNPITNVTEPIYKKAAKTFLFFLGILPSYNLWLAQSIKLNEICCDSDKNIFFEKVVLCEYDKDDLIRGSIVETFQNWAKTWEKSKEYKDFLIKVKLVKDGDYQELIKSEFLKDRNSDPLNNWLIFTRPSNELVVFKGSEFRRFPINMWLNGEAIADFEFEEGEERVVVRKKGMHSGPSLVYKEKQEDVNHEYYVLKTKQEEIQTWLWEKEMQMMGNQIATTETAPTANEETWAKTTFGYREYYKIDQNQGCRTFVFTESNKSEILHESLKYFINFCPFTPAAHGMFPKIEFRSESEIIDERPLISPNSEWEKKRKIQFGRVVITFVLLLIKHNLAITAPLNDYLVVNRHRQLQINGFYCIPHVSSNNLAENLAIYKAICLFDKDDNDPHLKNLMNILSANCKLDLPVTTALLQHPYFSQEGYNKFPTLVSGVKENNLRVCLQGAKVFDLGNVSHATYKEFFDKWICLFDEDRQFVGRKNLIEVSKEEIGGFVVKTFEDTSDSSEKSVVIPEELKCPVLEVLSRSVTTIRTDSMLYRLGLDKNRRLKRLGMSSKVENELMQYHNSYPFLSTISDVRYEGGVCVGDLLYEVGEGDLREKIKKLDKRQISFKIDIKFEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG9</accession>
    <name>A0ABV2AFG9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">S1 motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000372</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000056">
        <property type="protein sequence ID" value="MES1918403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045209">
        <property type="entry name" value="Rrp5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23270">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23270:SF10">
        <property type="entry name" value="PROTEIN RRP5 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="237"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="421"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="516"/>
            <end position="598"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="730"/>
            <end position="797"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="1001"/>
            <end position="1083"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="1189"/>
            <end position="1257"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="1274"/>
            <end position="1349"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1355"/>
            <end position="1447"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1360"/>
            <end position="1376"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1377"/>
            <end position="1388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1389"/>
            <end position="1411"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1412"/>
            <end position="1423"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1424"/>
            <end position="1447"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1447"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1447" mass="164152" checksum="036E15E5B7954630" modified="2025-10-08" version="1" fragment="single">MAVTSSNSGFKRGPLQKADRKIRKQIPISKKQIQILDKKSVHKEMLFLGIVKSITLQEVAVSLTDCLTGYIKTDEFLNENLSIHNKIGNRAIFESLKHILLHKPLLCAIVRVREKPSPKIILTANPSKTNNRLKTSYLVKDTLIFSLITSVEENGFIVETGIKNIQNSFLKLKNNNKFYEYLGSTDKNNKLITNLNILRLPVWSKVRKMEEEGLILSFCSKFPKIKQIREFDDLQPGIAVEATVVDIFKNGAKVMFQNIFFGIIDEFNSEKPTSDYKTGDKLIAIIVLVDFKDKKIILSTKPHLAQPFSKNKFTKMVLKTKRGTDLKDAKVSLNSKTNGLFLKFEQEHKKAKKFINAFCHVTRFGNDIHSRKSVLGGYKTGKNIDCKIYDSSEICGLFLVTLAEQKNGDDIILSLDDLVVGQILTGKLLKFETYGMLMSLGTNSIDENKSVKGVVPNEHFSDVVLKRPKLKFEVGQKIKCRVLNIDILARKVYLTAKQSFIEWNSDIPLTEEEAVNKILIGCVRSIFERGIYVNFFNGLFGFLSKREISAAGFEEKPSKIFFVGQPLKVKADALAPIKRDRSGNIASENKRMLFLTLDFSDKISQNAKEMALPFGNAQKFVKIGEMCAGTIIALLKNKAILKIDIRNSDNKSDDTTVRGELYFSHLSDLDCCSDEKFEKGHKIKLGDVFRKMAVIGFKKNGAALLTNKKLLIDKLDTEYFPFHLENVKRNSIYIGTIKNIRQKGIVVGFLGDLNCFCPISMALEKEETNLDEKYKIGKTVFVRIANIDRDKIIGSLKQNSFRNHNISLTKWCFENLVEQFWQINIGRTNIKIGQVFEAKTKNWKDKNRLEIDVLSNENSELFDNKIKTYLLTNREKLTIENPKTIKVVFIDFEIPENKEQPIKANFLLKSKTENGANFKNFSTIHNNSFYSLIMDSSSDSTAFKIEKLLNVKFCKNNLNFAEKFQIGNVSVFCSRNSKKASDSDEEEDSDSDLLFGLYTKGEKVEGVVSNVSDNGLDVTLNRSSDIKAIIHFSQMAENFTVLLQFHDYLSDRSEKTNFRHKKGSKIEAKIIGKRGNKLLLTLLPEKLNSEKRKIGQKWIPGRVVNVSNNVWLNVEVGERKQGRVHITNIKRNWDDDPMAEFEKGQFVKLYRTNNFYKNESNFELFSLYCVDDILSENLKRQLTNEIKLNDIVKGYVKSVHPSKGVFVTLNPFQDALVYKKDLSDGFVTDIESKFPPGRLVRAKVIFSDGKYLRLSLKGSDTDPSLKNFADFCKDQVVSAKVVSATPAGVFAKLESSSIVALCRLDNLENNNNLSKSELTDFYKNKIGQSLKFRIGSLNSDSQKINLTMKIGKISQNSKTDSADNDKISGDDNKKDDDISDDGKDDDIEEKFLNDIEGVEALKIDNEDKSESELDENGENNEESGEQKGEKMVEEKTKEVEKMVEESP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI9</accession>
    <name>A0ABV2AFI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000213</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15018" checksum="6206E2BE5B420330" modified="2025-10-08" version="1">MGNCQNKKLIETKVPNSKMISRKKTVLLPVPKHRKQNLNESNVQTEKQNLKTKKSKKHSNVNGYIEKPNIKNRQMNDILKFQINQQSLLLRKKEDLEKFSKGIYAQKETLEKQVALLEKQFSDLRTAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK7</accession>
    <name>A0ABV2AFK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATP-dependent DNA helicase chl1</fullName>
            <ecNumber evidence="3">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CHL1_1</name>
        <name evidence="3" type="ORF">MHBO_000415</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006555">
        <property type="entry name" value="ATP-dep_Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045028">
        <property type="entry name" value="DinG/Rad3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013020">
        <property type="entry name" value="Rad3/Chl1-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00604">
        <property type="entry name" value="rad3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472:SF41">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE DDX11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472">
        <property type="entry name" value="DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13307">
        <property type="entry name" value="Helicase_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00491">
        <property type="entry name" value="HELICc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-dependent helicase C-terminal" evidence="2">
        <location>
            <begin position="136"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="316" mass="36397" checksum="EEF7ADBC52AA322F" modified="2025-10-08" version="1">MATKTTESSRISIFVNAKNGDKLIKLWQLLISDEMEHVLNKSKSTILVGGTLKPFEDFVSVLMPNLKKKIEYFSCGHIVEDDKIAAFCLKNGPTNKIFDFCLANRKDEKMLKDLAFALLNFSISIPAGIVCFFQSFSYLTQIINFWKQNGLFDKLNNKKKIFIEPKNNSDVKDILNQYYNSIKFDNGGFLFCVYGGKFSEGINFKDDLARGVVCIGVPYPNRKDLELNERINYFNKIKNKSGDKFYQNICIKTINQSIGRAIRWREDFACIILIDKRYSLDENLSEGISDWIKKKKINCSKFGQCIKGVRSFFKQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL5</accession>
    <name>A0ABV2AFL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DEAD H (Asp-Glu-Ala-Asp His) box helicase 11</fullName>
            <ecNumber evidence="3">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DDX11</name>
        <name evidence="3" type="ORF">MHBO_000416</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002464">
        <property type="entry name" value="DNA/RNA_helicase_DEAH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010614">
        <property type="entry name" value="RAD3-like_helicase_DEAD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06733">
        <property type="entry name" value="DEAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00690">
        <property type="entry name" value="DEAH_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RAD3-like helicase DEAD" evidence="2">
        <location>
            <begin position="2"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14845" checksum="130DA23534AD7FDF" modified="2025-10-08" version="1">MSIENSVVVIDEAHNLIEALFQMYSQTVAQNDFSKFAENLNLYKNKYKNRFSRQNLQKLEKMENFLTNLGHFLENFEDFTKIFSVVEFERLSKIEDFNLNPLIQYFEENNISKKMVLNKFLELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS1</accession>
    <name>A0ABV2AFS1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">60S ribosomal protein L35a</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000473</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL33 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000074">
        <property type="protein sequence ID" value="MES1918508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.190">
        <property type="entry name" value="translation elongation factor selb, chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00573">
        <property type="entry name" value="Ribosomal_eL33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001780">
        <property type="entry name" value="Ribosomal_eL33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018266">
        <property type="entry name" value="Ribosomal_eL33_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038661">
        <property type="entry name" value="Ribosomal_eL33_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10902">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L35A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01247">
        <property type="entry name" value="Ribosomal_L35Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01105">
        <property type="entry name" value="RIBOSOMAL_L35AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="122" mass="14180" checksum="B902335E0B783A64" modified="2025-10-08" version="1">MSRSDKTKKTRKTKQKRVFKKPTRLYCHGVFLGYKRSRRVQNMNIALIEIDGLKTRKDVDFYIGKKIAYVYKGDKNGDKREMVGKVMRPHGNSGVVRAKFVKNLPAKAIGERVRVYLYPSNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS7</accession>
    <name>A0ABV2AFS7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000470</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000074">
        <property type="protein sequence ID" value="MES1918505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00198">
        <property type="entry name" value="vWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13519">
        <property type="entry name" value="VWA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00032">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046749992" description="Sushi domain-containing protein" evidence="3">
        <location>
            <begin position="18"/>
            <end position="879"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="815"/>
            <end position="836"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="4">
        <location>
            <begin position="326"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="879" mass="96122" checksum="320F240C4490CFEB" modified="2025-10-08" version="1">MCLNIIFFALLWNKLDAKNPKSLFTLTTCADTSYSMDLMNMKDFLHDFVTEVYTQTANLEGKPYSALISFADKAEVVLQPTFDEDKFYDKLKSLDLKSSDKTYLESCLRKVKDITDKRFGKHLVVIVTDSKIADASASGNLIQTLREKGLIVYIPEDESEKQTSNTVIRNLNLGIQTINFQDTGNIYWVVQDLLQKVLEVKNVCIGKPAKVEFGNFPDDCITKGHDFKCPLTCIKNYMSVGTGKSACENDGNWTHNSFCVSQCNQPPMCITKCDYNPEIFRSNAHLCKNTPVGKPCSGYKCFEGYVPDKLLQCMSGGIFSDSSCVSGCSAPPKKSVENSDPHSVEHCSAQVGKICNFSCKPGYARTENFVCTVPPRGWSGTGKCSRCDKFPPTKFGVDPKSIKGCINKDIDYVCPYKCNEPLVTNGILKCDPVTGTWTTSWGCQHGCRSKPSLPENAEPGSVDKCVNALPKTKCDYTCKPDNVKNKIMLCLSLSQPKWDTGSKCVAGCPNQPPLVVNSVAVTVSACAGLEKNKECVYKCKDNFVRNKKKLVCDSPDWSKGSACIAGCSIPLPNFKNLDISSGKACAGTPNNGFCDYMCVAGSIPNGRAQCAMSKWNVPMTGCIPGCTAAPSKFFGVDPASLTKANSCFNGNIGAICNFACLTNYKKSGSISCGRTQPNVPTWIISNAKCDFTGCKDRPPARQWKYKKDCTLIPIGGHCPYDCPSPLHQFGHNTCASKDGWKLAGVCDFACTKQPNVKNADPKSLEHCGFIQNGLYCATSCKSGYHRYGTDPVCVKTEWDSSHTFCVDNEPRKDGFIYGFLGVAAVSVLTGVSAYGVSAKYLDIPENEDLDIDEFPELDEGTEVKANETEIYIAGDYESN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW8</accession>
    <name>A0ABV2AFW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000082">
        <property type="protein sequence ID" value="MES1918550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="255"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="294"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="350" mass="41067" checksum="72CB923CA7A9FEA2" modified="2025-10-08" version="1">MPFFRKQVLKTAVIFATVPLGAITLHNSREMVEATFEQKTYNRLLDPYTRTIFDKERFRQLSSEYQMLVLNEIFKFLENPAKTSPQKFVEDQDILSIFCIGLERAFEYPIDNDTFPGASQISAILEALNTNPLAFKSLIEKKPEMVKLMAQAFYRQIKSKKSIHWKNKNIDLTFLTFRLFRALKRCENFSVSKKILRDIGYFSDQRKSESRKIWLKYNKEDSLMLTFQVIKYGLLWGLVNKMSSKKKFLVTTKKSLGLTLITLLLPYGIFRMFPKIEARFKKREILKNSSTILFSLQLASVSCIGILSKSLWTIPFIYYILFYTSKKFEESERDFMPGFRTIANAFNQIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI4</accession>
    <name>A0ABV2AGI4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000702</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000127">
        <property type="protein sequence ID" value="MES1918798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046396393" evidence="1">
        <location>
            <begin position="16"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12776" checksum="616B2FAE4BC9E53D" modified="2025-10-08" version="1">MFLKIFLMLVIAVKSADLNPAEVCGKKIPKKIANATNWLKPRFKLVQGKTGLVCALIWQTNRVERSFKTDPLKMCLFNKPDNGHFADRKFKNSTFVLNEDELLIHCDESFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI7</accession>
    <name>A0ABV2AGI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000467</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000073">
        <property type="protein sequence ID" value="MES1918503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17280" checksum="4FBA8EA6BF6CC51A" modified="2025-10-08" version="1">MKSFWSSTVLQNLYREVKNKELKNLIPKFVGINITEDLSCFAVSNEYMDRPKIIKFSEELLKISQSYTPHAFVFGISLNELGKHTAKSREEFSFIAKIADRHDYKGDFYFWRKFERHDKMANSVKKNTCGMLEDFLHELKLQKIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ0</accession>
    <name>A0ABV2AGJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000687</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000123">
        <property type="protein sequence ID" value="MES1918778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047300966" evidence="2">
        <location>
            <begin position="17"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="50"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="126"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="157"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="253" mass="28345" checksum="CB4DFD051D5D2CC4" modified="2025-10-08" version="1">MPISILILLHFGVIFGNAPEIKPIAQKEQPVVESEPVAIINQPVAQRESVPQREQQVVQREPVAEREPVVEREPVAERQPVPQREQQVVQRESVPQREQQVVERVQPVVEREPVAERQSVPQREQQVVEREPVAEREQPVAQREPVAEREPLAPREMSSQTGGSSSIGYHKNGELDEANTSTAYSFIGSVTNFFNSFLPTDDDDDDDDPDIEDITNTLGEFAEKIVTGTVQDDFAAKNAIFPVIGIFIILLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ9</accession>
    <name>A0ABV2AGQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000752</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000141">
        <property type="protein sequence ID" value="MES1918856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="30056" checksum="10962745DD7057DD" modified="2025-10-08" version="1">MENFKIYCFVGAFVFIALFIIVVVIILRNRNEKLKSIASYSSQFDRLYKISFPFLAFWVTEILQDQRETMEMFLAVDFLKHLKKDTKECKSMKTKMTRYFKNYVKSGKFVYSNVVSKINSQKGINDRTVDLVYKELFQITEAHFTNFRSRFAAKLRYDFYKYYSRARPLMYLLMATKTITYVEIQELSLKPLHRVARGIWKKWAKASFLFYSFDYCDEDLEKDDCVKDDNIIKRIKIKVEDYLNGNVYFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGZ3</accession>
    <name>A0ABV2AGZ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GTP-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000603</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000104">
        <property type="protein sequence ID" value="MES1918668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00154">
        <property type="entry name" value="Rab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050227">
        <property type="entry name" value="Rab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47977">
        <property type="entry name" value="RAS-RELATED PROTEIN RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00176">
        <property type="entry name" value="RAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="181" mass="20551" checksum="24D80F49C922430A" modified="2025-10-08" version="1" fragment="single">MGQKEKYKIIFLGESGAGKTSVIRRVSTGQFVDNVQTTMGIDFQIKKVQKEDYTFLLQIWDTAGQERFKSLVSSYIRGSNIIAIVYDVTSRDSFESVEMWIEEIKKGTDKRPELWLIGNKVDVKSREVETEEGRNKAKTNKMHFIETSAKTGENIDKFLTQTIDFLYEKVGGTSKKGSKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH83</accession>
    <name>A0ABV2AH83_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Histone deacetylase interacting domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000896</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000180">
        <property type="protein sequence ID" value="MES1919018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1160.11">
        <property type="entry name" value="Paired amphipathic helix"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013194">
        <property type="entry name" value="HDAC_interact_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003822">
        <property type="entry name" value="PAH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036600">
        <property type="entry name" value="PAH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039774">
        <property type="entry name" value="Sin3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12346">
        <property type="entry name" value="SIN3B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08295">
        <property type="entry name" value="Sin3_corepress"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00761">
        <property type="entry name" value="HDAC_interact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47762">
        <property type="entry name" value="PAH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51477">
        <property type="entry name" value="PAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Histone deacetylase interacting" evidence="4">
        <location>
            <begin position="200"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="37586" checksum="852CABCA21A792BE" modified="2025-10-08" version="1" fragment="single">MENSISNSPSYVEYTQAVYFLTKIKERFRKHPTDYMRFQKILNDFQIKQQAIYKHDDSEENILRIIRDTRQSIIELLRGRKDLVKEFLFFLPDGQGESGSDLDTIKRQMLQAEENDSINYKFRVIKEIKDTVPRHTYKLFLRALNLYSNGIVGYKELMQLVADLARPGTSECFAQFMEAIDNKGESRTLISRIGETRRSERKRATPSYLRIAEEDAGAPAMTTRSSVCGNGRVLNNSLVSVPYNKEGNLFHTNNRNEYEERMLLFEDDRYELDVLIALNERIIAKLERFVESVGSNGHVVLAEEGEVDLSIVERNNIRKLYGSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH96</accession>
    <name>A0ABV2AH96_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Small subunit (SSU) processome component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">IMP3</name>
        <name evidence="9" type="ORF">MHBO_000725</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the universal ribosomal protein uS4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000134">
        <property type="protein sequence ID" value="MES1918824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022801">
        <property type="entry name" value="Ribosomal_uS4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001912">
        <property type="entry name" value="Ribosomal_uS4_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831">
        <property type="entry name" value="30S 40S RIBOSOMAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831:SF1">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00163">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01390">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55174">
        <property type="entry name" value="Alpha-L RNA-binding motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50889">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS4 N-terminal" evidence="8">
        <location>
            <begin position="3"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21779" checksum="173834CC0E41D7CA" modified="2025-10-08" version="1">MRKLKHHEKKLLKKVNLYDWKSDDNVREVRILRRYRIQNREDYVSYNRLTGKIRKLSAKLKLLDETDIIRKKITKELLLKLYNLGVIKTIKSLEQCDRIPASAFCRRRLPVIMQMSKMAENLKEATTLVEQGHVRVGPNTIIDPAFLVTRTMEDYVTWVPGSKIKKHILEYNDNFDDFDFDQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHA7</accession>
    <name>A0ABV2AHA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000919</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000186">
        <property type="protein sequence ID" value="MES1919045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="15015" checksum="79B94ED6C574B246" modified="2025-10-08" version="1">MDYINKDANIIAEEISNLKSKINRLDKDEIINEIQNLNNIFGKKIDLIPHFKKYWLLLYCIIIYDAFITDDINVDDKDTKDIKIKLIELQNDNEHLSIFHSNLWHYLTSLEKFLVRKDDKKDLYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH5</accession>
    <name>A0ABV2AHH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000744</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000138">
        <property type="protein sequence ID" value="MES1918848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="80"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18483" checksum="51B6FB8F76648797" modified="2025-10-08" version="1">MLNFQNTDSSETSENNGSDLIVYNKQQNFGKLKKWTTEKSAFSDSELSSLKTKRFDLSTDVIPHAKDDFSIDFLRYEKSVRRKKQPSTREKRQVHHNKTKKSSKTKNKKPGKNKESACHKLNCIKNERKKSAKTKSKKHVADLEDDFGLPTLTFLLFANL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI43</accession>
    <name>A0ABV2AI43_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glutamate dehydrogenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000917</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homohexamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the Glu/Leu/Phe/Val dehydrogenases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000185">
        <property type="protein sequence ID" value="MES1919043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.285.10">
        <property type="entry name" value="Glutamate Dehydrogenase, chain A, domain 3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10860">
        <property type="entry name" value="Leucine Dehydrogenase, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminoacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006095">
        <property type="entry name" value="Glu/Leu/Phe/Val/Trp_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006096">
        <property type="entry name" value="Glu/Leu/Phe/Val/Trp_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006097">
        <property type="entry name" value="Glu/Leu/Phe/Val/Trp_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033524">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014362">
        <property type="entry name" value="Glu_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050724">
        <property type="entry name" value="Glu_Leu_Phe_Val_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006929">
        <property type="entry name" value="PRK09414.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43571">
        <property type="entry name" value="NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43571:SF1">
        <property type="entry name" value="NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00208">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02812">
        <property type="entry name" value="ELFV_dehydrog_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000185">
        <property type="entry name" value="Glu_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00082">
        <property type="entry name" value="GLFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00839">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="Aminoacid dehydrogenase-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00074">
        <property type="entry name" value="GLFV_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase C-terminal" evidence="6">
        <location>
            <begin position="254"/>
            <end position="498"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="505" mass="56827" checksum="BE13E6755B8FCBAF" modified="2025-10-08" version="1">MSHKILRALNPKGHCLLKRNFAFTQVAFKSDIAEILKEIRHIDRKKDDILRQKQVEQLINALHQDMMSKPLDQPLFIQAVEEVITSIKPFLVRNPKYLELIPLLCVPEQVHMFQVPWVDDNSLQRVNLGYRVQFNHALGPYKGGLRFHKSVDLSVVKFLGFEQIFKNALTGLPIGGGKGGADFDPKGKSQREIFKFCKSFMNQLIHYIGPDKDVPAGDIGVGAREIGYMYGHYNRLSKVFHGSMTGKGLGWGGSHLRPEATGYGLIYITDCHLKHKNDSLENKRCLVSGSGNVAQFAAEKLLHLKAKVLTMSDSNGTLYNVNGFTEKQLEALAKLKDKRMRCKDLVEVFPEIQYYENETPWTIKKEADLAFPCATQNEINRQDAVNLVEMKCKGVFEGANMPSSVRAIYTYMNNNIDYIPAKAANAGGVAVSCLEMAQNSARLVWKREKVDEMLKEIMQNIYVAISKKAEQLGHKGNLQLGANTVGFKRVADAMFQQGTVFRPDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH4</accession>
    <name>A0ABV2AIH4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">subtilisin</fullName>
            <ecNumber evidence="3">3.4.21.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001300</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>Hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.</text>
            <dbReference type="EC" id="3.4.21.62"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the peptidase S8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.62" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000301">
        <property type="protein sequence ID" value="MES1919474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051048">
        <property type="entry name" value="Peptidase_S8/S53_subtilisin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43399:SF4">
        <property type="entry name" value="CELL WALL-ASSOCIATED PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43399">
        <property type="entry name" value="SUBTILISIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase S8/S53" evidence="5">
        <location>
            <begin position="3"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10478" checksum="802D9E0EE6A913B7" modified="2025-10-08" version="1" fragment="single">GRAIDYAESKGVLCVASSGNHTRSTKWEDVDVAYPAFYSEVLSVAAINFDARKGSLNFDETKFSYRNSQVDLCANGVNVTSTVPGNRYGILSGTSMAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIM6</accession>
    <name>A0ABV2AIM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001333</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000313">
        <property type="protein sequence ID" value="MES1919515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047536788" evidence="1">
        <location>
            <begin position="20"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15478" checksum="DDD661F524557EF6" modified="2025-10-08" version="1">MDYLSILNALLLSITVTLTIIKFALNPEEKSNWEFEKTVKKFEDEIERCIEENLRDEFEDEPVNIRQFVFDGSTPFIFLISEIKRMVSLGTKREKISTEVLSIEDFVFLRKLSSDLTSETYLGKNYLNSTNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ64</accession>
    <name>A0ABV2AJ64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001511</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000382">
        <property type="protein sequence ID" value="MES1919731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8008" checksum="456B253CE2BAD410" modified="2025-10-08" version="1">MDFVRNCGKRWLQNGTKRAWKGRQGMELTKRGCSDSVSEQMGFFDLGLKNANISVFFALQKLKFCLSNLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE4</accession>
    <name>A0ABV2AJE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001571</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000406">
        <property type="protein sequence ID" value="MES1919806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12556" checksum="8EECB3BED9C8718A" modified="2025-10-08" version="1">MLKEEPDQLAQILRKLSSYMDNRKSLKSDFYSPVNNESSINYSEDYLQIYWENMLKASDSEWQSGVIVSLKKDFVEKFGNSKTHFLDPIFFETSLFVFYKNDYFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE6</accession>
    <name>A0ABV2AJE6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SANTA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001553</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000399">
        <property type="protein sequence ID" value="MES1919785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015216">
        <property type="entry name" value="SANTA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09133">
        <property type="entry name" value="SANTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SANTA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="12353" checksum="BEBDABA5C1713244" modified="2025-10-08" version="1">MRKVTLTNWHFEPKIIATETYKRVALKFYGYLFKDNSRFETNFVARRLSSNQFLTIDGRLIRLTGKLDYNSCKQYFKKDEGKFLKLFELGLPENFMQIIELLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG5</accession>
    <name>A0ABV2AJG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001327</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000311">
        <property type="protein sequence ID" value="MES1919508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="12019" checksum="CA62C3B17C75334E" modified="2025-10-08" version="1">MRMFEFLLSIEKETPIIPINLITNDEYQKTLFTKIDEEKDEFDFFKEYKLSDFSNYFLTINEYKDLSEIFDIEINENNSEKIKREFVERLRAKYYKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ5</accession>
    <name>A0ABV2AJJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000320">
        <property type="protein sequence ID" value="MES1919538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9756" checksum="C5C80C0BBA610848" modified="2025-10-08" version="1">MCYCDLFELGNDIGIADFYLGGLLRLQPKKLYEGDLRYIECRGEKNMLVLPTNKSKNYLMTVCENGFLKNADFGNVTDLSFNCKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJX6</accession>
    <name>A0ABV2AJX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ZZ-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001720</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000469">
        <property type="protein sequence ID" value="MES1919986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.60.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043145">
        <property type="entry name" value="Znf_ZZ_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="repeat" description="PPR" evidence="4">
        <location>
            <begin position="161"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="227" mass="26198" checksum="0AFE383C604F1B05" modified="2025-10-08" version="1">MYEGDGVQCDECRKINIHLSSSGFYHCDNCGGVDLCDECAEKNSIRESSKSSFQSKNRFESSEVLTEPSEILPEESINLGVEERKTELKEMPSFWYLLFGEKWINDRSVFNETNHQKTKTEKSIKENSDKVHFDLIEKVKENPEKAKEYYFNLIYSGTMPNSFTYFILFDACCKGCGNSEFVHELVLHMKILGVVPNKRTVKALLKNFVGEANSIWKNRYQDMFSAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK94</accession>
    <name>A0ABV2AK94_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TNF receptor-associated protein 1, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TRAP1_1</name>
        <name evidence="3" type="ORF">MHBO_001818</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000513">
        <property type="protein sequence ID" value="MES1920102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.790">
        <property type="entry name" value="Heat shock protein 90, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037196">
        <property type="entry name" value="HSP90_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00183">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110942">
        <property type="entry name" value="HSP90 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0675">Receptor</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16647" checksum="035E3EED816514E6" modified="2025-10-08" version="1" fragment="single">SKKKEFELSEDQSEDLCEWLQNTLKSKVKTVKITRRLDKAPAIVTGHESASVQVMMNLASGGADNHRTPQTLNINPAHPVVRGLFYTMKEEEPLAKKVAEQMLDNAMIAAGLIKDPREMLARLGEIMTAAMDVEGIEMELKEKKANKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA9</accession>
    <name>A0ABV2AKA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005303</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000511">
        <property type="protein sequence ID" value="MES1920098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14647" checksum="564480739FD836C8" modified="2025-10-08" version="1">MFASNKLFRKRLSTTALKTEKALIKKSSPKPVQNYHWVNLIKAEYWDRSNMKSARTAKNSDEFLHINHQKHSIMASSKNLSSFSIGGILLVLQIAAYLLGYRFVYRNIYANNGQKGFYNVSESKKAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC9</accession>
    <name>A0ABV2AKC9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Importin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001846</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000524">
        <property type="protein sequence ID" value="MES1920132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03810">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50166">
        <property type="entry name" value="IMPORTIN_B_NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="1">
        <location>
            <begin position="30"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="30231" checksum="A52C53E97B0677BC" modified="2025-10-08" version="1">MIGNENFTKQIYDSFLKICDGSSPNEIASAKNLLEKLNGRDDYLLALTNILKKEGASENVKILSAIEIKNFVKRKRRNSLPLLKNDNWTSNFAQSILEIYFSSPSCNKKQVYFQMSVAIADIFAHRSFPEIDLISVIKNFLASKSFIERQKSLQILKEILEILTSENRKTEIAKISKNIFSEMAENWGKFAGFLFSGQNKYVKESKESFEECSITTKIIYFMISVGTTSEDISSNEKIKRLFADLLSVLKRMAEFKLTEKDSNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL5</accession>
    <name>A0ABV2AKL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001899</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000550">
        <property type="protein sequence ID" value="MES1920206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047379176" evidence="3">
        <location>
            <begin position="19"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="229"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="272"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="36862" checksum="12B508170BA90491" modified="2025-10-08" version="1">MNLLVYLLNPLIAAIVTEQCIGTFLSDPNVYFNGCNTDGNMFNGTCDIKAKDGSVIVYVNGFNHFNYSKNLTLTCQNKIVAPFFHRSVKLCPFPFGKYLDSLETNKCWLFNGNSTFADYCELEFASPNFYFKIRGGYHNNASITCFKGKPVEPVPEIVDQSHATSCYSDLSSFSNGVLLRGCQSNMDFAVCVYKCNFLYHSFDGREYGYSYCVNSIVFFRPECFFRTKMVIVITILTITGITAIFVSILFTIDCCGTVNIGIFRSRRAETNRTKSKSENITSRRGKHDKNSNNQNKDDESTNNDHNFSKVDDNGPNYDNEQHGIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP2</accession>
    <name>A0ABV2AKP2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HD/PDEase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001896</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000549">
        <property type="protein sequence ID" value="MES1920202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3210.10">
        <property type="entry name" value="Hypothetical protein af1432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050135">
        <property type="entry name" value="dGTPase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11373">
        <property type="entry name" value="DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11373:SF4">
        <property type="entry name" value="DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109604">
        <property type="entry name" value="HD-domain/PDEase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD/PDEase" evidence="1">
        <location>
            <begin position="50"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21022" checksum="048C26A4A31E8176" modified="2025-10-08" version="1">MIHFPRIINDSVHGQIELDNHLMQFVDSPYYQRLRGISQLGCVSYVFPGATHSRFSHGIGTAHLSNVYLSHLSQSEPHLSEEKLRKRDKEIVEIAALCHDIGHGPFSHAFDDFICNRIGSKQWNHEERSCQIVEKIIDEKGLDFNGDDVKKIQSIVKPGICNFRLNLNCSETNLFIRRKKFCC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT0</accession>
    <name>A0ABV2AKT0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphatidylserine decarboxylase</fullName>
            <ecNumber evidence="6">4.1.1.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PSD2_1</name>
        <name evidence="6" type="ORF">MHBO_001970</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.65" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000586">
        <property type="protein sequence ID" value="MES1920284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004609">
        <property type="term" value="F:phosphatidylserine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003817">
        <property type="entry name" value="PS_Dcarbxylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10067">
        <property type="entry name" value="PHOSPHATIDYLSERINE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10067:SF17">
        <property type="entry name" value="PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02666">
        <property type="entry name" value="PS_Dcarbxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="3 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="4">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="129"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="472"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="472" mass="54474" checksum="F4AE439BF05C286C" modified="2025-10-08" version="1" fragment="single">MYKSDPFCIASWGKQSYRTSTKLKTLNPKWNEFCVFLVNLDKQKDSLLKILVLDYDSFSRNDKLGVAYLRAATFFREAQNKPVSLNVPLHIYFSDLDIHVSNIMNGDVDKSANKGTLSIEIEITSRKNLEENILNNIFKKIDINKNGILETREILNYLKSRIKITKQEEDSLERVIRTKRILNPLDVIYVLTSNKIGNGKLLKKVTEQFLTEWDNLAKKPMLYIPADIKRNHFVQDRKTGLVTKEYIPKYIRKAMKLMYTKNCLPGFIKKKLVKLSLSYGEKYENKRNTAKQIRNFIKKYNVNVDEIEGTIDSFATFNDFFARSLKKGVRPLSEPLNDAVVTSPADCRMMSFRSFYDSTRFWVKDSHFTIARLLGPKLSYLSTTFKECTLVIARLAPQDYHRWHSPITGTMRSVTPISGWLLTVNPIAVNRKIDVFTANKRVICEFDTKLMGKVLVIAVGATCVGCIRLFLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT7</accession>
    <name>A0ABV2ALT7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002119</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000679">
        <property type="protein sequence ID" value="MES1920454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="22292" checksum="86A67EA00F91FBC0" modified="2025-10-08" version="1">MVNLKLEKKLKSENEKEFDRFIKIRFDQIVKIEKTDKKQFYRQFLEAIEEVEREYSPHKMYNLLFKFFFAEDFVSQMTKVRFVNKIVNLDLNRFIGHFRREILESDNLEDKKTLSEILTIAETAHLEKLRDKTDLIALLNAKLVSYENFFKIWESIDYLFDELNKKKKEEVLKQLKRYVCRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU2</accession>
    <name>A0ABV2ALU2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002291</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000782">
        <property type="protein sequence ID" value="MES1920638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24126:SF14">
        <property type="entry name" value="ANK_REP_REGION DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24126">
        <property type="entry name" value="ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="108"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="141"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="23030" checksum="34FA1C5DDCA0B3CC" modified="2025-10-08" version="1" fragment="single">MTSDENAQLRNLHSFEIGQELFVLRSNASWDEGWIVKDVDIKSVTLYKNKMSKRFYIEQAKLFTKPASKSRPHDPSLCEGVILGDCRLFNKIIARSPDCNIPEEVQGREEYPLLLAVRQNQLEMVKTMLLNGADTTVGDQNGQSPIHLAAANDNVSVLKALLDCGANLDAKDNSGKNALHLAVLNDSERAISFLIENSKNLIFGEDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW5</accession>
    <name>A0ABV2ALW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002304</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000787">
        <property type="protein sequence ID" value="MES1920653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="29389" checksum="0329AEC5B12CFBBF" modified="2025-10-08" version="1">MVTIISICKFYIVLNNTSICKFVNNFETNLDSLRYVYKRSYAIFDRKGCFSHLKKINYDSKLINELMIDSIIKKCVFEEKGTFLGATLPLLNIDEKKFLDLYYRIFNSVQEFRRLIKKIRNILDFFIEFDDINKSPEFDKTKYNSSDFYKELDENSDDVKGSFEDFSLLRYIYGLINDYELLLEKMDEFYPDSVFYPEKVENLNKCEDLNVFFTDLKGESCGNAPRVMTVSLIIDVLLFIAITINPSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ0</accession>
    <name>A0ABV2ALZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002329</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000804">
        <property type="protein sequence ID" value="MES1920683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="20787" checksum="D04752D93A43BCB1" modified="2025-10-08" version="1" fragment="single">MLSATFNMLYLVTSAICLYLSNFPFELKGANLLQYFSNPLNAFIFFNSLVALTVSVFLVSLKASYGSLTSEETKKSFMILFNKINLNFLMVYFIVGIYDTLEMFAWLAILFTSNIFIIFNSIFLGRLRTANVFTDISRLRKALRLSVFGILTLLNLVALFFGVSVLVSNVGKDIFVLLYYDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM59</accession>
    <name>A0ABV2AM59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methionine--tRNA ligase mes1</fullName>
            <ecNumber evidence="7">6.1.1.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MES1</name>
        <name evidence="7" type="ORF">MHBO_002397</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.10" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000848">
        <property type="protein sequence ID" value="MES1920758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004825">
        <property type="term" value="F:methionine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.730.10">
        <property type="entry name" value="Isoleucyl-tRNA Synthetase, Domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023458">
        <property type="entry name" value="Met-tRNA_ligase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015413">
        <property type="entry name" value="Methionyl/Leucyl_tRNA_Synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45765">
        <property type="entry name" value="METHIONINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45765:SF1">
        <property type="entry name" value="METHIONINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09334">
        <property type="entry name" value="tRNA-synt_1g"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methionyl/Leucyl tRNA synthetase" evidence="6">
        <location>
            <begin position="15"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF09334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12455" checksum="627ADB70B940917D" modified="2025-10-08" version="1">MLSMSFVLLQKETGIPASVWRYYLLSVRPENSDSNFDWDDLAMKANNELNNNVGNFVNRVFKFIATKFNGQVPELGKIGKNDFEFIGYFANFLQISNFKNLSKSRKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM63</accession>
    <name>A0ABV2AM63_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Envelope protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002403</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000850">
        <property type="protein sequence ID" value="MES1920764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047418570" description="Envelope protein" evidence="4">
        <location>
            <begin position="19"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="585"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="622"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="183"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="640"/>
            <end position="655"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="655" mass="74852" checksum="92394157381C6C9D" modified="2025-10-08" version="1">MSSYVVLLVCMAFTMVCAKVDNDRFLGNVGVYLEDSGTIVFSKAYWHHTFVIELPKVDDIKSFFFLCHSWEKRLLCARQEIHPMQSFIKQLDTDMVNSIKELTTFVSRNLQSFSGSRRKPRSAIFSFIGSLSKSLFGTATVEDLERVAHRVNSMIQQDINLTNAINVERKNFESFMQLENVRYESMKNIINDTRKNLKGLTNRLGSLQKEFLDAQRMMAASFVVQNISYSFQQHIADIRHAITLLTRGYLSNLLISDQQLQSGLRKIAANAESTHLEYLQHADVAYHRRHGSYIARVHRETGNIWVTLKVAVGPRTQDRLFRVHSFAVPIGKNPRHGTIITRLPEYIIDRQFEDQHAYAAIKSDLLSTHCKRMGRFHHDCEGMLGWDKRPQSCIAGILKDDIRIIGKYCTHRFLGNEFTTATPLKVLAENNILVVNRKTLRIQCGRKMTDIRGCVHCRIKIPCNCRIVDGDSVIDAGSSLECNNVDQSIMEYSHLFNLLVSKDYDAIIAKASQDWSNGMEHLNVLPNAEFHDDKYEELLSVDKEDELHARQVRDRVKEDEEVFSKLADAILTGAIVLPDDWSSPFSILLLISIALIGISIPLVVKGYIGMYRRISQYVKEHEEDISTTNAEESDNRSETDNMSETCVKNYSGYRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG8</accession>
    <name>A0ABV2AMG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002485</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000916">
        <property type="protein sequence ID" value="MES1920863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.120.20">
        <property type="entry name" value="Ribosomal protein L25, beta domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="entry name" value="Ribosomal Protein L25, Chain P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_bL25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_bL25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020057">
        <property type="entry name" value="Ribosomal_bL25_b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037121">
        <property type="entry name" value="Ribosomal_bL25_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029751">
        <property type="entry name" value="Ribosomal_L25_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020930">
        <property type="entry name" value="Ribosomal_uL5_bac-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33284">
        <property type="entry name" value="RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33284:SF1">
        <property type="entry name" value="RIBOSOMAL PROTEIN L25_GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01386">
        <property type="entry name" value="Ribosomal_L25p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14693">
        <property type="entry name" value="Ribosomal_TL5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="Ribosomal protein L25-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Large ribosomal subunit protein bL25 L25" evidence="5">
        <location>
            <begin position="69"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="Large ribosomal subunit protein bL25 beta" evidence="6">
        <location>
            <begin position="170"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF14693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="32267" checksum="C8B192228969C5F7" modified="2025-10-08" version="1" fragment="single">WLNKNIQKQYKSFLALKALKLKMPLRIVNRFIKYRELPPLTPMCNYLRRDKPENKWDIPVADAFHLHKKGKKFTKKLREFGLVPSDISNFSEEKRFGRIAIPHKQIKSLLETFGFSASLLKLKIKNLNSDESDNLDNLEIKVIAKEVFYHPISQEPLSVTFQRFIEDKPIKIQFPIFYENKLSCKGVRKQNGALRILKNKILCVYKGKEKNLPKFLRINLANLELGRSCNVFDINFPPEVKPVWKYKTPPKFCKVVACTEQKEEEKKEEKEEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI8</accession>
    <name>A0ABV2AMI8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002318</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000796">
        <property type="protein sequence ID" value="MES1920669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="64"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11517" checksum="A7B6FFAA43A0C775" modified="2025-10-08" version="1">MRARAQLNTINQTNPVEAVNYQNSPYFVDQNNRRNQRNHQQPIPNDRYPSGDNQQRNRFENAYSSSNILNENILNPNPPSTNDISASQMSRVNIDGTSGIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR0</accession>
    <name>A0ABV2AMR0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002384</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the centrin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000839">
        <property type="protein sequence ID" value="MES1920744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050230">
        <property type="entry name" value="CALM/Myosin/TropC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048:SF59">
        <property type="entry name" value="EF-HAND SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048">
        <property type="entry name" value="MYOSIN LIGHT CHAIN 1, 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="26"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="62"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="102"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="138"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="20311" checksum="EA33B6F081D7DC65" modified="2025-10-08" version="1">MESLKRIKRSSTKQKKKLDLSKIDPQILDDLREVFDLFDIDGNQSITYHEINRAFIALDDKQSIKKIRKMIKKVDKNKDGELNFEEFVELMHQNLEKYRKISDESEYKAVFGLLDKNGDGEISADELYRVMNSIGISLSYEEVNLAIKETDKDCNGTINYKEFRNMLIHGPKNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS9</accession>
    <name>A0ABV2AMS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Signal peptidase complex catalytic subunit SEC11</fullName>
            <ecNumber evidence="4">3.4.21.89</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Signal peptidase complex catalytic subunit sec11</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="primary">SEC11C</name>
        <name evidence="16" type="ORF">MHBO_002573</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Catalytic component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Specifically cleaves N-terminal signal peptides that contain a hydrophobic alpha-helix (h-region) shorter than 18-20 amino acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins.</text>
            <dbReference type="EC" id="3.4.21.89"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase S26B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.89" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000987">
        <property type="protein sequence ID" value="MES1920971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009003">
        <property type="term" value="F:signal peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.109.10">
        <property type="entry name" value="Umud Fragment, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019758">
        <property type="entry name" value="Pept_S26A_signal_pept_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015927">
        <property type="entry name" value="Peptidase_S24_S26A/B/C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001733">
        <property type="entry name" value="Peptidase_S26B"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02228">
        <property type="entry name" value="sigpep_I_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10806">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10806:SF6">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00717">
        <property type="entry name" value="Peptidase_S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00728">
        <property type="entry name" value="SIGNALPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="LexA/Signal peptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00761">
        <property type="entry name" value="SPASE_I_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9 16" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0645">Protease</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="156"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S24/S26A/S26B/S26C" evidence="15">
        <location>
            <begin position="47"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00021755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00045533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1920971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21019" checksum="5CFFC32D912641A2" modified="2025-10-08" version="1">MDIIDTFIPGFSDQTKSVLRMDLRRQILKILAFAVTFMSAFLFWKFSMALTGSDSPGVVVLTQSMEPGFYRGDILFVVGPKNLRAGDIVVFQTAANDIPIVHRLMEIRETPNGRTYLTKGDNNKVNDRGLYSKDLWFLSEEHLQGKIVGYIPNLGYITIMISSTPTSRALAFALMGVYYIFSREEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX3</accession>
    <name>A0ABV2AMX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-directed RNA polymerase II subunit RPB3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">POLR2C</name>
        <name evidence="5" type="ORF">MHBO_002627</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001030">
        <property type="protein sequence ID" value="MES1921026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.120.12">
        <property type="entry name" value="DNA-directed RNA polymerase, insert domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.10">
        <property type="entry name" value="RNA polymerase, RBP11-like subunit"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00320">
        <property type="entry name" value="RNApol_arch_Rpo3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001514">
        <property type="entry name" value="DNA-dir_RNA_pol_30-40kDasu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011262">
        <property type="entry name" value="DNA-dir_RNA_pol_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011263">
        <property type="entry name" value="DNA-dir_RNA_pol_RpoA/D/Rpb3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036603">
        <property type="entry name" value="RBP11-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022842">
        <property type="entry name" value="RNAP_Rpo3/Rpb3/RPAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036643">
        <property type="entry name" value="RNApol_insert_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050518">
        <property type="entry name" value="Rpo3/RPB3_RNA_Pol_subunit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11800">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11800:SF2">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01000">
        <property type="entry name" value="RNA_pol_A_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01193">
        <property type="entry name" value="RNA_pol_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00662">
        <property type="entry name" value="RPOLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56553">
        <property type="entry name" value="Insert subdomain of RNA polymerase alpha subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55257">
        <property type="entry name" value="RBP11-like subunits of RNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00446">
        <property type="entry name" value="RNA_POL_D_30KD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="DNA-directed RNA polymerase RpoA/D/Rpb3-type" evidence="4">
        <location>
            <begin position="19"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="27193" checksum="DD07C345AD4AE3CF" modified="2025-10-08" version="1">MDTPSKYPKIKILELNSSSIRFKMFETNHSIANGLRRILISEIPCLAFDSAEINENTSFLSDEMIAHRLGLVPLQCDNIEEFNIPEQCSCEGACPKCQVCFKLRVRAQRDKLLVYSGDIKNESKREQPGHSVKIFDADAPKGEGTILAKLGPNQKLEIVLVARRGIGKEHSKWSPAFVKFNYEGGEGNDSGENAPTEFEMEVESMGQMAPEKLVRTALKVLREKIDTAHEKFTSMHDLFDDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN48</accession>
    <name>A0ABV2AN48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002687</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001082">
        <property type="protein sequence ID" value="MES1921101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="18156" checksum="0773F7E563754496" modified="2025-10-08" version="1">MRCENPFFYKLYNNGSRIEHTLKIRFVCRMGIFMQRNSSLSISSIRCRLRSDAILYVAIFVAVPIVSIIIAFAIIKYCRRKNSGRRESFLAEENDPDFSRCSMSFQRRRIDYVRPHSEIFLKPVYNEKNTENRLNLHRSYIKVVISKIESFAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN64</accession>
    <name>A0ABV2AN64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pre-mRNA-processing factor 17</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CDC40</name>
        <name evidence="2" type="ORF">MHBO_002458</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000894">
        <property type="protein sequence ID" value="MES1920828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="114"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="126"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16556" checksum="9CDAD076D6F9EFB3" modified="2025-10-08" version="1" fragment="single">MEEIQTVYNNEEDETIKPKIKLNETTVNLAPDLNIKTQNIENNDNVKENNQISNDSEQFLFPDNTLNGNVKKFAMDDFTFEEKFHTFKNYGYSLDPTNMEKSKFIGDEKQFSDFGGSTVFRENPLKRKKYRRPKREKTGDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN78</accession>
    <name>A0ABV2AN78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002702</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001096">
        <property type="protein sequence ID" value="MES1921120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051973">
        <property type="entry name" value="tRNA_Anticodon_Mtase-Reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14344">
        <property type="entry name" value="WD REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14344:SF3">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="3" id="KW-0853">WD repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="31983" checksum="EEA773AB3D37C006" modified="2025-10-08" version="1">MFFSAGCKESLNCYQILDDENQTKFKHVCSNKKEKRSIFKPFDPQKIIDIRINIIKAFFVSGKIIVITGNSIGFFNAFRFLENKFEFLAKLENDELSPILSISKLKNIQNPTAKTRHFVTGDTNGLISILKFSWNSNLEPNLTQIGSKKFHQRGVNCVKSVKNNLILSAGDDQKICIFKVEPDLSKYLIWQKENCSFSSIKSINFLNENVFTVGMDQIVRKWKVDFPDLNSAKDENLKTKLTLLESRDSSVVFPLGMKLFKNGNHVLAVVYGNGFEIIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN90</accession>
    <name>A0ABV2AN90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002722</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001110">
        <property type="protein sequence ID" value="MES1921146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037721">
        <property type="entry name" value="Ferlin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12546">
        <property type="entry name" value="FER-1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12546:SF33">
        <property type="entry name" value="SPERM VESICLE FUSION PROTEIN FER-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7917" checksum="88A2C5FB00CA8D00" modified="2025-10-08" version="1" fragment="single">ITKRNDLYIKGFLLNEQQTQKTDIHLRTKTTAQFNWRMIFQSKYPIDNERICLQIWDKDFLSPNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANB3</accession>
    <name>A0ABV2ANB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002732</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001117">
        <property type="protein sequence ID" value="MES1921160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="15220" checksum="99781861436A6C95" modified="2025-10-08" version="1">MLKKLCKKLFTRKTKLNPAYLDIVSTWRDYGVTRGDLNHYQDISTSWSAEMLKLERPNEFLRMNQRIVRYDRLYYERLNLRDKQHLVQTKNIENDVMAPYKMLYYKLVNEKNSRGIKKYCPAYIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANL1</accession>
    <name>A0ABV2ANL1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001201">
        <property type="protein sequence ID" value="MES1921261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="107" mass="12684" checksum="16A597ECF5F5681E" modified="2025-10-08" version="1" fragment="single">MSGKDKTEEENLKEIEAKRLFKMIPVTRLLPYFSTTEILNLSQLSKKWKKQASTHFNKVRYLDLSEFWVLLGNIDISLFVPFCEKFESVQILNFSYCNYLTDNDFLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP8</accession>
    <name>A0ABV2ANP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002828</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001210">
        <property type="protein sequence ID" value="MES1921275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10329" checksum="7C30C32949CFEC26" modified="2025-10-08" version="1">MDFAVTESFYKLGIISFSMLIIIILSLSKSVIPQSSVNGFMINSAIGVLYGISTGYVCYFVSMILFSKYTEKMVEYGYNTSAPRVLEFIHNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP43</accession>
    <name>A0ABV2AP43_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glycosyl transferase family 28 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002969</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001349">
        <property type="protein sequence ID" value="MES1921438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052474">
        <property type="entry name" value="UDP-GlcNAc_transferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47043">
        <property type="entry name" value="UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47043:SF1">
        <property type="entry name" value="UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycosyl transferase family 28 C-terminal" evidence="1">
        <location>
            <begin position="6"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="19752" checksum="D082B49F620A4FC6" modified="2025-10-08" version="1">MVEKKTCLITVGTTRFDGLMQILNSRKIAQKFCTFLKNNNFGNLIVQRGNGTVVPLKLKEFSDGIDVTILAFSNELRQIIEMSDLIISHGGAGTIFEVLAMKKDLFVVVNENLMENHQMEIIEKMADFGHLFYSRLKDFAEKITAVDFSALKKYETVRENCIAKDIDRFYNNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP58</accession>
    <name>A0ABV2AP58_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002756</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001137">
        <property type="protein sequence ID" value="MES1921188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="26927" checksum="B452D84BD30800DF" modified="2025-10-08" version="1">MISSAFFAISQTMFYAYFAEYSNQAVQIEITGMAAPNVLFALYSLLIKNQITNFQKRQICYFLFPIVLHFAALFIFFIHSSPKPQKVIILYSNYSLLLEILTNVKRDANVNKPLQKKSLRIFYKAVLNKKWKLILLNASLYYSTFLVYPSIMMNIKPSNAKIGDNWGLVLLFLYGVSELAARIINAADFDFVKKIFSERNNGIDKILICFDTNSNIYGFRRTVLFSVTSSRRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP59</accession>
    <name>A0ABV2AP59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002998</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001377">
        <property type="protein sequence ID" value="MES1921467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9310" checksum="BF1586B1A25A80B6" modified="2025-10-08" version="1">MFLSDLAVSFIKGICYVFSYIEEEKNLRGAIRSVMSTCLNIMRKMPATEDAVVTGIDGIAHIVQCFDIRHKPLSFIFFETTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP68</accession>
    <name>A0ABV2AP68_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADPH--hemoprotein reductase</fullName>
            <ecNumber evidence="5">1.6.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003007</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.2.4" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010001388">
        <property type="protein sequence ID" value="MES1921478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.990.10">
        <property type="entry name" value="NADPH-cytochrome p450 Reductase, Chain A, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="entry name" value="Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003097">
        <property type="entry name" value="CysJ-like_FAD-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023173">
        <property type="entry name" value="NADPH_Cyt_P450_Rdtase_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19384:SF17">
        <property type="entry name" value="NADPH--CYTOCHROME P450 REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19384">
        <property type="entry name" value="NITRIC OXIDE SYNTHASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00667">
        <property type="entry name" value="FAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="Ferredoxin reductase-like, C-terminal NADP-linked domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="Riboflavin synthase domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfite reductase [NADPH] flavoprotein alpha-component-like FAD-binding" evidence="7">
        <location>
            <begin position="11"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Oxidoreductase FAD/NAD(P)-binding" evidence="6">
        <location>
            <begin position="227"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="372" mass="42613" checksum="C329A4DB3F16B22D" modified="2025-10-08" version="1" fragment="single">TNTDRKHISTIVKVVKNVKISRDSTKWHTEFSVEKSKLLQEYETGCTLCVAPRNDFWLVDKICRRFGWNKNLVFSIKSNGGLLDSRFCTKILNLFNEKSEKFLKSVKFSQNLTKDLKAFENPMTIKRALLWYFDLTHFPKMSLIKSLSNFVEDKAEKSIIEKLAKLDKNPEKKIVSVTYSLVGEDEPFGVCTKYLKNLRAEKDSAAVFLKQSSLRLPRKLDGAAIIMVGAGSGLAPFKGFVEHGAAEKERAGIGDWCLFFGCKSKKNDFIYESELLTAEKSGVLKHLFVAFSRDQINKIYVQDRIRENSGIVWKLLCKRRSFIFICGSTGMGLSVKTEIKRIVLDNLKSRKKADQFMEKLRDEKRIVSELWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC5</accession>
    <name>A0ABV2APC5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Micro-fibrillar-associated protein 1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003057</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001450">
        <property type="protein sequence ID" value="MES1921531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033194">
        <property type="entry name" value="MFAP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009730">
        <property type="entry name" value="MFAP1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15327">
        <property type="entry name" value="MICROFIBRIL-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06991">
        <property type="entry name" value="MFAP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Micro-fibrillar-associated protein 1 C-terminal" evidence="2">
        <location>
            <begin position="195"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="255"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="315"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="84"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="142"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="195"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="256"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="319"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="403" mass="47942" checksum="42BD60CE99AE8B2D" modified="2025-10-08" version="1" fragment="single">MPKQTPMLTLNQKLPGEQPIFKKTKQHRQYRTGEVPQWLKEEEYMNVEKSDNKPQILREKISPQKSRANLRRTNGKDRKWKRTDRRDGKVLNREEMEKTDSDTEDELTNFGNLDLDNLKVARLPSSKKKVGDQNSKKSGRAALKEALLKKEKMRKEIISKNEKVQNTKSNKIDEKSSEYEDSDSSSELDEQNELAWRRLEADKPRFISSKRRGGQRTHETTNELALQLRATSAENEEEEKLRRRTESVRLVVALSRAEKEAEKKERDSELAELPDDRDDVDEEAQFELWKLRELKRVKEDVEKRLQFEEEQELVRRRRAMTEEEREKDNRKSGSKRYEKKQEKIQYLQKYHHKGAFYQDDRLITKKLMERNFMDPVGEDKYTNRLLLPDVMQVKNFGLASRTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX0</accession>
    <name>A0ABV2APX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003252</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001679">
        <property type="protein sequence ID" value="MES1921721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7279" checksum="BEB54B97705E6AAB" modified="2025-10-08" version="1">MWTHRTSKNAFAYQMLRNRIVLSTNDQGVRGRLLRKSKFTPDSATDTCRTNERTSNYLTKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APY3</accession>
    <name>A0ABV2APY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001688">
        <property type="protein sequence ID" value="MES1921730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="189"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="30284" checksum="CF05E32F2B8896B6" modified="2025-10-08" version="1" fragment="single">IRGKMDKDPLSKDTSGIINEINCHMALNLEINTKRNSSRDLLSKIEDRLEKVNYIGIANTRERISVDAMFSVVSNEWVAKLAKLREHRVKVENGVRLVDLYKQHENIASSIEKREENFYFKYCCEYEVKNLLDAKRCMFRLKYEKDNNKYFFRKDEKTMETLETQIKPLSKTCLPPLNVIDETVFKDAKAKLAEIKRRTEERYEESSKKLSDLIARELCKERVNIMIGAHSDACQELVQWCSDQRDVIDAIECDDEKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD7</accession>
    <name>A0ABV2AQD7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">peptidylprolyl isomerase</fullName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">FKBP4</name>
        <name evidence="6" type="ORF">MHBO_003409</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001887">
        <property type="protein sequence ID" value="MES1921874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050754">
        <property type="entry name" value="FKBP4/5/8-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46512">
        <property type="entry name" value="PEPTIDYLPROLYL ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54534">
        <property type="entry name" value="FKBP-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0697">Rotamase</keyword>
    <keyword evidence="2" id="KW-0802">TPR repeat</keyword>
    <feature type="domain" description="PPIase FKBP-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="213"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="218"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="365" mass="41146" checksum="5C5B178796D88D53" modified="2025-10-08" version="1">MKIGEKSDLFCTAPYAYGEKGSGASIPPNSTLKFQIELLKADFPSITSDGQIKKEILKKGSGLDSPSSGSTCKIVYSARYGTSSPKQFIAEQSKTIIADEGVSPSGLVTALENMKAGEKSKFFISEGEHHFHPDDLPPSMDRADLLEYTIELKSFEKKKNVYEMSDDEKLSEAKVAREKGNLWFGKNRFANAEKRYEYAISCLEDIEGVFGPDSMEDPLLKSEDGENEKGESKEDEDKSNDEEESKIAEEAKKVILASLNNLAAVKIKKEKWDEVIENGEKALRIDRLNIKTLYRIAEAKAAKGQFDEAVLEIEKCFESAKISEKQRFLMKRKKMEFLRKKKESQRIVDSMYKRMSEGFGERAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD8</accession>
    <name>A0ABV2AQD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001613">
        <property type="protein sequence ID" value="MES1921671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031248">
        <property type="entry name" value="RNF213"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22605:SF16">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22605">
        <property type="entry name" value="RZ-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8259" checksum="7185BBF4E1540C9E" modified="2025-10-08" version="1">MKGVPLGKNIAKNKALVENVFMMAICIELQIPLFLVGKPGSSKSLAKTIISDAMQGMSSHTNVYKTLKKVSIPERI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK3</accession>
    <name>A0ABV2AQK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003441</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001928">
        <property type="protein sequence ID" value="MES1921912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8226" checksum="BC0C82DFA74AECC2" modified="2025-10-08" version="1">MVNVLSKMSSSKKRVFGFRQESDVSSPTKAIATPLENLKVLYRETILPLETAFKVLLLMPFLKSSQNFIRHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL6</accession>
    <name>A0ABV2AQL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003309</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001754">
        <property type="protein sequence ID" value="MES1921779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="207"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="207"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="30711" checksum="8DA718E5CD56E9DC" modified="2025-10-08" version="1" fragment="single">MNIFKFLEEENDYKRKLFVTKFYDNIPWQYFLEIEEDQEIPTIQEMKEKLLSVVDHIKDTLTMHSMLKDNSKMHKFILVSKAHQQFRSGGFPLEHLFNAQIEIYKNTRILTRLLQSTEALNDNFLKADEKGYVDIISLQEQMLPIMKWDMFWYILSYSQHLQIEDTKVRSKNNWRKTVSNVYSLCCAKNNRTTNSRIGHDKIIEKEISEEDTTKEEITEEDMSEEEITEEDMSEEEITEEEITEEEITEEYISKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR5</accession>
    <name>A0ABV2AQR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003532</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002078">
        <property type="protein sequence ID" value="MES1922011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="16755" checksum="2FDB73AB7AAAF680" modified="2025-10-08" version="1">MLTGNDASNVSLKYGVYGTEIDIPFVPFEFGGRAEPNAYGITPTNLLNTGVYGLCMQDHIVADNAGLEVSSNTVAATARRYIRGTKSSASLGLLSYIGMGNADNIPQSPLCVPTFSRADQTKSPAAANYSMMLDRVAPDGLQYYSGFSDGLFMYPNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU3</accession>
    <name>A0ABV2AQU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003389</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001858">
        <property type="protein sequence ID" value="MES1921854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="9025" checksum="08A22B79CA1F7F08" modified="2025-10-08" version="1">MEGEQMKNQLLKERVKDLTQEEHAIPSEVSLKNLAEYQEKEIIKLREALSYQVEENDQLIKDNKCLKEIIKNIAKAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV7</accession>
    <name>A0ABV2AQV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003578</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002156">
        <property type="protein sequence ID" value="MES1922060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="28081" checksum="BEA97C60E1BA2053" modified="2025-10-08" version="1">MLILSKWRTIFRQNKLLQINFKTRLLISSISNNPVLIEKRKSKNKKSVVNENNSIEKITEILENFANCKNLEKKNIKQLLFIKNSLNKLSEKNFAKLLSIIEANFALFSQNSEWVKIITILISNSEYDGFKEFWGELLAKNYNTIFKSKEFLWMNWYLEYIDKAKYPTFYMKIKENEFLLTSKLSETIKFCSEYAICAYNHNDLEFENFVQKNFVEICNNAQSFKIISVFNFSRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX6</accession>
    <name>A0ABV2AQX6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003352</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001809">
        <property type="protein sequence ID" value="MES1921818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021067">
        <property type="entry name" value="Glycosyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34496:SF10">
        <property type="entry name" value="GLCNAC TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34496">
        <property type="entry name" value="GLCNAC TRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11397">
        <property type="entry name" value="GlcNAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20963" checksum="A8D9F65D1F9DF2C0" modified="2025-10-08" version="1">MPRIKNAAQIHNPLADPQMPLMVPMFGGGFSFSKADRVRLVKNDPFLPHIFDGEEINMTTRLWTHGYDFYAPSEDIVFHFYADKKDEKRPSFWKVNFERTQREGKRSSARLRYLFKMAPDNEFPADLRQIGLYSMGTKRSLEQYYHLLGIDPVTKECKNLSQEVYSGRFHARNHRTRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR30</accession>
    <name>A0ABV2AR30_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003454</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001949">
        <property type="protein sequence ID" value="MES1921926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="86"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="97"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="27787" checksum="37D784726920ADEC" modified="2025-10-08" version="1" fragment="single">EFINKINIEKEITTLQRLGIEDGAILVFRIMNTLLKKGAAADLTLSQIARIALRPNRKDPSRLETVVITAMASFYLFQNSFPAPTINRTKTKKSSSGNNSEPQTAKSSSDNNAKRPTSRSVATPGPMKLPENLEGEEEITKNKMANLKSTHFKLKNEGKRARRACSSMDLRYWKNCNNCFATLRALFVPRQREWRMSSEVDIPEKFGERLWLSRCAQLSNDFDFLGRIESLLDLVVKAERKKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR70</accession>
    <name>A0ABV2AR70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquitin-conjugating enzyme E2 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">UBC4</name>
        <name evidence="2" type="ORF">MHBO_003481</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001986">
        <property type="protein sequence ID" value="MES1921956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050113">
        <property type="entry name" value="Ub_conjugating_enzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24067">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBC core" evidence="1">
        <location>
            <begin position="1"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17854" checksum="E633C4BF2401A4C5" modified="2025-10-08" version="1" fragment="single">MSIVRLRKELEKLEKDPPFTCSAGPIDEEKNFFKWRAIIMGPKATPYDGGIFELKLIFPHNYPFKPPSVRFVTPVFHCNIDQSGHICMDILNSKWSPILTVSSLLLSVCTLLTDPNPDNPLGESSNLLVFNKSKYEETAKYWTRKYATMTNILNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR84</accession>
    <name>A0ABV2AR84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003501</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002013">
        <property type="protein sequence ID" value="MES1921974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="65"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="37752" checksum="3EBB9A05A43FB4E8" modified="2025-10-08" version="1" fragment="single">MPLKNIKRNKSKSFTFEDTENTNSDDSKDAQFLSEFVDFRDCSDNDIQEKDFTENDFYAANPVDSSELVSSSSSETIDKNKEDELPLLSSYDTSYKDFGNEGAKPKNIKRREIVQKEPKTEQKSEYLRHRMCKKRNKYLKKIDEYEKSDEDTKTETLDDKIIKKEQKSLTSAREIDKLTDTTGDIDVSDNLDEAMISANPVEKEFVEYSKKMQAFYVTERHPKYTLAASKTKQQYLEKKVKGYPLLEILSINSIFSGIVLDIVLKNLWEHFYEIVQTKNKLINQNIGKNAILVIYRNLGLKIVFVDCEIVETENNDYESMLRQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE6</accession>
    <name>A0ABV2ARE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002457">
        <property type="protein sequence ID" value="MES1922243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="42"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="26885" checksum="42BBA4F6A05AFB0A" modified="2025-10-08" version="1">MSQEESATITETENITKTSPETENVPKETKNEQIEQTDQNKSEPQSENQTSTKNDVQENQQENQTEEQKKDVFEQTPLNSNFPGEPNFFPQMGEMFGEPGAIPEMQQQNIPNYAFAEGNENTSLFPGSFGQNFQGQIPQTDENFSYGVGSPQMGEAGANIDMMAAANPQMYQDMAQVIPRGEFSSVSQPDSKLCPARLSQEELQRELGARGLVYSEDDQVANIARLVNYLVDREYVFDLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ2</accession>
    <name>A0ABV2ARJ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Delta-aminolevulinic acid dehydratase</fullName>
            <ecNumber evidence="8">4.2.1.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003809</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>2 5-aminolevulinate = porphobilinogen + 2 H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58126"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="4.2.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homooctamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the ALAD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.24" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010002549">
        <property type="protein sequence ID" value="MES1922300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001731">
        <property type="entry name" value="ALAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030656">
        <property type="entry name" value="ALAD_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11458">
        <property type="entry name" value="DELTA-AMINOLEVULINIC ACID DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11458:SF0">
        <property type="entry name" value="DELTA-AMINOLEVULINIC ACID DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00490">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00144">
        <property type="entry name" value="DALDHYDRTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01004">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51569">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00169">
        <property type="entry name" value="D_ALA_DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="4 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 8" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18211" checksum="2751E9C1A8BC40EC" modified="2025-10-08" version="1">MMDNRILKIRQTLNQKNLQPIAIMSYSAKFASNLYGPFRSACKSGVAKSISSTKNSEICNKIVLKNRKTYQLPSMATNLALKASKRDELEGADFLIVKPAMFYLDIISAVSKNVLVPVAAYQVSGEYVMLFETEKRFENFEIILESLHSIKRAGGFKFDLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL7</accession>
    <name>A0ABV2ARL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003813</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002557">
        <property type="protein sequence ID" value="MES1922306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21479" checksum="CE7C75D32A9748FC" modified="2025-10-08" version="1" fragment="single">EKLPEVILDKEDDIVIIPIFNIGKNLSEVSKSLSERATELDFEIMLKDKLKSLGLLLYVKDVNKYDLNSLKMDYVGNVSVFGLSLKDTNNLIVFAECDSYKELENVYQQVNRDISLFPEVGTDFEHLLVYDNVIWVVQIKGLDVASNNDSTFSKIWNGDVLTKAHTEGKIFQGYKQVEHTAIQNSVDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV9</accession>
    <name>A0ABV2ARV9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA2/NAM7 helicase helicase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003726</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002402">
        <property type="protein sequence ID" value="MES1922214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045055">
        <property type="entry name" value="DNA2/NAM7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041677">
        <property type="entry name" value="DNA2/NAM7_AAA_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887">
        <property type="entry name" value="DNA2/NAM7 HELICASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887:SF495">
        <property type="entry name" value="HELICASE SENATAXIN ISOFORM X1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13086">
        <property type="entry name" value="AAA_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA2/NAM7 helicase helicase" evidence="1">
        <location>
            <begin position="52"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16785" checksum="E015802060C4FCD5" modified="2025-10-08" version="1">MQNKLRQFSAVASIDHISLKNEILCPSLHDSNFSKKNWKNVSKRLRKKFKRELNLSQYKSIKTAMQTNGISILQGPPGTGKTKTVISLINLLHIAAYSKYYESLLNWIKSEHSDNNKKVKQNFGGITSLQNINLNTFKQFFQNLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW2</accession>
    <name>A0ABV2ARW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003922</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002745">
        <property type="protein sequence ID" value="MES1922410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="6581" checksum="4DAEB96CBB982569" modified="2025-10-08" version="1">MSAVLSTVDSASVSESRWPGAKCGRARAAGVGQADRMQSAVDSAGVSESSWLDVKCGRVRPLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS38</accession>
    <name>A0ABV2AS38_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004007</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002930">
        <property type="protein sequence ID" value="MES1922489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.40">
        <property type="entry name" value="q5lls5 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002124">
        <property type="entry name" value="Cyt_c_oxidase_su5b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10122:SF0">
        <property type="entry name" value="CYTOCHROME C OXIDASE SUBUNIT 5B, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10122">
        <property type="entry name" value="CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01215">
        <property type="entry name" value="COX5B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57802">
        <property type="entry name" value="Rubredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51359">
        <property type="entry name" value="COX5B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="1">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9634" checksum="B0006214A37B5F6F" modified="2025-10-08" version="1">MGGNFGTEEEPVLIPSRMDHRIVGCTGYGERNHDLGYFLLRAGPIHRCPECGQCFALDTAHPGHPDHPDHKYYEEEKEVWDLQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS67</accession>
    <name>A0ABV2AS67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004037</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003012">
        <property type="protein sequence ID" value="MES1922519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="148"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="161"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20489" checksum="D544D46D2BBEA660" modified="2025-10-08" version="1">MGRPISIENVHTKTQKNIQKNSAQSNRLPFYNAKMDFRLQNKMQIANNKTSLSQKFGNSILTGQFEKKTFLPKGQNLNLLQRPNFPISAKNGINNFMSRKSVNLKPTEMFNKENRNLKFNGNLKFRNRQIDEDKTLGQFLQNSFLNSANQKNPRKLPCDISKPDGISKEKKTDLAKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD6</accession>
    <name>A0ABV2ASD6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003867</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002654">
        <property type="protein sequence ID" value="MES1922361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14447" checksum="87FA32C1EA5F69A8" modified="2025-10-08" version="1" fragment="single">MLIKTPCEETNVNLLILPKKQLEKLPNGSFMKEDRKQVFRCAKIAFEIAENKTENFNGSIGVIIEHEKSNWSIVRMLILKQKLISKHLVHDVCEGYEDWKQQNLTETIMCLSLLSTNFLNILRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD9</accession>
    <name>A0ABV2ASD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003904</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002717">
        <property type="protein sequence ID" value="MES1922394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="39"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="157"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="253" mass="29752" checksum="E1866EB81F37E55B" modified="2025-10-08" version="1">MQNLAFPMKQDFAKPKSFSEKLKFFILQKPLSLKLSTELQKLETEIYETEKSVEKLENEINDFGKNENNFKQFVEKIEDVSVAEILIRKTAKIEEQKTESEKINRKNKISSICTFVLSKQCSELEEILLSLNNKNAFLYSNRLSIDKSLQSLEERHFRDLKRKIEENDERMAKLKEKQKKVNEFEEKKEKEKMRAENELRFGKVYQILSSALGAVPLNLDENGFRFKTGQNRFFVEVLENGKIFVSLLNENGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH5</accession>
    <name>A0ABV2ASH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">GTPase IMAP member 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">GIMAP4</name>
        <name evidence="4" type="ORF">MHBO_003835</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002593">
        <property type="protein sequence ID" value="MES1922327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006703">
        <property type="entry name" value="G_AIG1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045058">
        <property type="entry name" value="GIMA/IAN/Toc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10903:SF184">
        <property type="entry name" value="GTP-BINDING PROTEIN A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10903">
        <property type="entry name" value="GTPASE, IMAP FAMILY MEMBER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04548">
        <property type="entry name" value="AIG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51720">
        <property type="entry name" value="G_AIG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIG1-type G" evidence="3">
        <location>
            <begin position="3"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="33118" checksum="CCCD9EE03D46322D" modified="2025-10-08" version="1" fragment="single">SCRRRETHNSNWENRRWKKCNWEYYFGGKGFESKSGEEAVTKKASFLTAERFIHKIVIVDTPGLADTNLTDNEVKAEVLKSFIITSPGPHAILLLVRPSRLSHDEVEILSKYQKFFGENFKKHLIIVFTDKDRLEKDGTTIEEYIGTLKHGSILKTLLNEVDNRYINIGYSQNFNDPDRLSEVKELISLILELKRRCGSLNTELTGKAEEIYDRIVELKIKKQQQKMSETTYTKYKIEEWRDYARGEFLEYFLGVSVDAFVRTFQGNYTEFTYGLLNTIYLCVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI9</accession>
    <name>A0ABV2ASI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">FACT complex subunit ssrp1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SSRP1_2</name>
        <name evidence="5" type="ORF">MHBO_004139</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003258">
        <property type="protein sequence ID" value="MES1922622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.10">
        <property type="entry name" value="High mobility group box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009071">
        <property type="entry name" value="HMG_box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036910">
        <property type="entry name" value="HMG_box_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050342">
        <property type="entry name" value="HMGB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48112">
        <property type="entry name" value="HIGH MOBILITY GROUP PROTEIN DSP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00505">
        <property type="entry name" value="HMG_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00886">
        <property type="entry name" value="HIGHMOBLTY12"/>
    </dbReference>
    <dbReference type="SMART" id="SM00398">
        <property type="entry name" value="HMG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47095">
        <property type="entry name" value="HMG-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50118">
        <property type="entry name" value="HMG_BOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMG box" evidence="4">
        <location>
            <begin position="20"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="HMG box" evidence="2">
        <location>
            <begin position="20"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="80"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="80"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="107"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="122"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="17297" checksum="C7459DD2844923C1" modified="2025-10-08" version="1">MVKKTKKSAIKKFRKDKNAPKKPLTPYFVFMNENRAEFKKNHPDKKVTEIGKLLGEKWRSLSEKEKTVFVEKSKELKKEYQTKLDKYNKSSDKKQYEKEKNDYAEKMKKKMKKKKRRKVETESESEEEEEEEEAGGSDTEDESSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST5</accession>
    <name>A0ABV2AST5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">R3H domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004237</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003494">
        <property type="protein sequence ID" value="MES1922712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02325">
        <property type="entry name" value="R3H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.50">
        <property type="entry name" value="R3H-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001374">
        <property type="entry name" value="R3H_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036867">
        <property type="entry name" value="R3H_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01424">
        <property type="entry name" value="R3H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82708">
        <property type="entry name" value="R3H domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51061">
        <property type="entry name" value="R3H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="R3H" evidence="1">
        <location>
            <begin position="22"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20563" checksum="DE82B1F43476E074" modified="2025-10-08" version="1" fragment="single">WDDHKFVYFSKNVLDCSLNVKLSFLTKLEDKLEKFSLDKNKKTLYLDCQNGMKRIIIHNLAKNYGLKTETLDNFYKSSVQISKETSTFVPVTKLSDAIDDYKENKFILESVGWPIGCTLHGRNNSKSEKTIKLVKEELSENELNIKMKIFKNTSEEMDENKRNLNAKFFSIKFAPAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU5</accession>
    <name>A0ABV2ASU5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Flavodoxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004261</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003548">
        <property type="protein sequence ID" value="MES1922738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001094">
        <property type="entry name" value="Flavdoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034556">
        <property type="entry name" value="tRNA_wybutosine-synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13930">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13930:SF0">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE TYW1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00258">
        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00369">
        <property type="entry name" value="FLAVODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="Flavoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="2">
        <location>
            <begin position="6"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="27486" checksum="59236B2A6506FE3F" modified="2025-10-08" version="1" fragment="single">MALELINVVYCTQNGTSKDISSKFIRHFKNNNEKFAIQQKDILNIDPEEVTNEKIYVFFVSTYENGNPPKSGKYFFDWLKSAKTDFRISKNHFKNTFYSIIGIGDSNYNENYNKAAKTLNKNLRFLGGNKISECCLIDVSTDFQEKLLHNFNAILENLNNINFDFTFNDDQNYEKCSSSDENERKEEIIDDLEEMNSALDEITEKSIGSKNGQKRDMLTPSLRRNLGKQGYKLIGSHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW8</accession>
    <name>A0ABV2ASW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003994</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002911">
        <property type="protein sequence ID" value="MES1922477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007720">
        <property type="entry name" value="PigQ/GPI1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05024">
        <property type="entry name" value="Gpi1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="20796" checksum="0C7048B128A55C4B" modified="2025-10-08" version="1">MMDIIKLALKPLKIIYKKYLKIDSFFKYCICVFRDLFRGRRRNVLSGRFDYLPHQIDQFILGTVFLSLTIFIYPTIFIYKLILGFLYLFSLSINVSMLFLHNILLKIDMFAVIATIFNKNWDFEDCSNFFLTFDFEENYRNSKVYHLELRRSIDYFKILKYLLPSKSDFTNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY8</accession>
    <name>A0ABV2ASY8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003729">
        <property type="protein sequence ID" value="MES1922791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="23249" checksum="85BB363C080ECCDB" modified="2025-10-08" version="1" fragment="single">IESRLQKNTGRQICCAEWRWLSNWTVDHNLSPRNEGWLYSENSKDLATFKTGKSSKDRFRRRRLYRARFLDTPDNFNSEEYVFIAFKEFATDLIIRVARQTDIHDQNTFEERQFALYEAITITRFEKDVYTLFGNKEMRNCEITESQKIIKETETLFGIVLSGGKKKDMIERIQGYLDELTIYRSNANSKNRAVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT94</accession>
    <name>A0ABV2AT94_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004422</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003975">
        <property type="protein sequence ID" value="MES1922891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="24524" checksum="A846577157BC95B4" modified="2025-10-08" version="1" fragment="single">MSKTETYADYKHISDKDVIARILGIKNCPVDKLGTPLVNIRRQRVYKVLPAEYFGVIFTPRLEICDENGLVLKLGKDYRGIDDMTYRTYPEIQRVVPRCYSIFLIFERQTEKLVERHIMHGYYKFGGSSKDEDTNVNTLSILRQAPISETERVVITEKANGKAAVMTMFRFEGQLFMFGGSKGDHYVTPVSAGMEFMQRLNRNLFAFYIFDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA3</accession>
    <name>A0ABV2ATA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004427</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003984">
        <property type="protein sequence ID" value="MES1922896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24715" checksum="60B788D03C4B87EA" modified="2025-10-08" version="1">MDMNMLLKKSGNEFNGWFVSFTTDEADKFDGNAKMFRSNTVDDWYPEEVQRSKMQEHQWETLAKAPAKKSKGAARRARNAAKKAKELADSCRTIVYRPHHWMDAGDNEELATEDVSEQQPKCEEPSGPPEDWDTEAMLEYGFTDAHYQLTFDSDDEEEEEEVVVVKQELSAPVIDWDAGVSHTRRNSEAENWDQNQDDEPLRYDAIAKKWIWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG0</accession>
    <name>A0ABV2ATG0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Bromodomain associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004484</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004135">
        <property type="protein sequence ID" value="MES1922953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00076">
        <property type="entry name" value="HFD_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006565">
        <property type="entry name" value="BTP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07524">
        <property type="entry name" value="Bromo_TP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Bromodomain associated" evidence="5">
        <location>
            <begin position="40"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="14748" checksum="27570CB3F089391F" modified="2025-10-08" version="1">MSENVGKNIENQEYVKKIGTLNLLSLADSTHGKKAKLSSAALFALENLTEAIIKDIGKTASLHANCAGRNEINFLDCFFSLEKLGVDIESFAEQFKVDNSEKIRNETLINDSDFDRIQNLEFDENTFLRKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM9</accession>
    <name>A0ABV2ATM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003534">
        <property type="protein sequence ID" value="MES1922732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="10014" checksum="4C675877F07E023F" modified="2025-10-08" version="1" fragment="single">NSKLKRAIVQERVKAVREKMDEHLKAETNFVDFNENFGKEEILLKNSMDQISMDGGFVEKNDRDLRMFIGGFVATDNEYFYIFKGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU55</accession>
    <name>A0ABV2AU55_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004697</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004909">
        <property type="protein sequence ID" value="MES1923154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="17274" checksum="177F2D56CE6A3263" modified="2025-10-08" version="1">MVQRYGLQMKDIEGRRAQEQAAFAAQAASADEMNRYRQGLMGFDIGQRQRQADFANQLLAQRKQDELNRELWKQGQQQTDYERALALAGLGQSAAGMQSQQDIAKRQAESAQTGALYGGLGTALGGLMGAYDQSGKSGWNFGGASNADGSGVDWLSGLFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU64</accession>
    <name>A0ABV2AU64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004474</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004100">
        <property type="protein sequence ID" value="MES1922943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.31.10">
        <property type="entry name" value="Transcriptional Coactivator Pc4, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009044">
        <property type="entry name" value="ssDNA-bd_transcriptional_reg"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="23901" checksum="608F4DDCD2B852F3" modified="2025-10-08" version="1">MLRSAAKNYFPVSKKLTPSEFAEKSNIGRVFKVSKNLSINQFCPIYARQDNQIAMFRPGYIVFNFMLGAGNNEYHAHPLKINQIVRLATRDSDLFFTSISDSPNRTSKKIQVTKQVDGTMEVVAFYSRATNNDLNHKWNKVAQIHVENHVWTTLKILLRDAIPRINGWRIDEPILFKENFLTNEGEPVFKEVESLEKEPEKKVADQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL9</accession>
    <name>A0ABV2AUL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004668</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004778">
        <property type="protein sequence ID" value="MES1923126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="14211" checksum="EAEF7A12376182D2" modified="2025-10-08" version="1">MISEWSDYIQDFSREKKILLVAAILGYLSQVISLFLGITGYYKYRSFIEYINKAFAIFPIYLFFNYNLTLFAIFYSMRESKSEMKRAIPSFFIFPLSFTVLQSGFVDYLSDRFNQQRLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM4</accession>
    <name>A0ABV2AUM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004937</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005872">
        <property type="protein sequence ID" value="MES1923373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14245" checksum="3430B2362C5BD9F0" modified="2025-10-08" version="1">MFGKTIKAEILSANNDIFKNAFSKRNLKKSDFIDLTQLRKDKLAKRINFTNQRKTEEEMDKRKKRLITKELKKKEKLKKLGIDYSFNGFSPLIWSNFSEFSFFSNKSLPGPSAKTVFEPEGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY3</accession>
    <name>A0ABV2AUY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005047</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006341">
        <property type="protein sequence ID" value="MES1923470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11080" checksum="513F35C25BC1536D" modified="2025-10-08" version="1">MEKSKCQIFWIIVGIISFLFICAFMVGIFVSFVVLGDYRYRNLLTSDEKIIFLSITFGLVLIGFAGLSASKKYYDRYTKIQNGNQETKNLKPEVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV00</accession>
    <name>A0ABV2AV00_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004843</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005479">
        <property type="protein sequence ID" value="MES1923294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6514" checksum="830AC4DAE40A44E9" modified="2025-10-08" version="1">MINKQVLQLFVGLVVGYCHEGIIEVEGNRNSLWKPPCPLDTTTADNEDRTRVTAVRSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF7</accession>
    <name>A0ABV2AVF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005276</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007500">
        <property type="protein sequence ID" value="MES1923658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7371" checksum="DBEDD917F9504D34" modified="2025-10-08" version="1" fragment="single">HTMYLSFYGLSLAIVYHVGVPKIMSLPLLNSSTTNVMIIFTCPALQNTLYPPEYTLLSEGVHFGKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW67</accession>
    <name>A0ABV2AW67_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ferroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005232</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007261">
        <property type="protein sequence ID" value="MES1923624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="Ferritin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="103" mass="11622" checksum="CD27402D77B804F1" modified="2025-10-08" version="1">MYNYINVAIDEVAEAMLINQLTPHASLKDFLATSKIAESPAKHVSSSHVWAEVHQDYSYLRDLCIAIKEKASKEESNSIEQLMDGYIAAFDKDLWMLSQAVDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF17</accession>
    <name>A0ABV2AF17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000276</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000037">
        <property type="protein sequence ID" value="MES1918289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="134"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20569" checksum="528A584F58E65974" modified="2025-10-08" version="1">MYRTENILYDNYLQPHRNIKVICKTPFGSTVKHTDLFCEESGLKISGCNAEAQELDSDIFCNSGCINKSNLNNHNSNDVKNVIDYNNEVTDYGNNEILYHDNDNDEAKDYDKDNDEAKDYDNDETKDHKMKQIYITQIAVITFISILTFAIIVILVYFVLNRTNIFERRRSRLIQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF66</accession>
    <name>A0ABV2AF66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000313</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000044">
        <property type="protein sequence ID" value="MES1918334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="30131" checksum="474904F1CE16782C" modified="2025-10-08" version="1">MCSINVEKNIKYVKTPEKTIINKDTILVYDPFRDDFVPQKSNDTHKFSDSKKEKHSTKIDKKDLDKVDSTKKDYGKIDKKEVKTEKKKTFHFKDFLGQYGSIDGLMTEIINNDKFQEIALFIRQYPFIRNILKLLFDIGLGGMRAGGCSRCSSGSFQGGDSFASRRFEKGKTNLKKEDFEQLLYALDKLKDVVESDPELLNFATRFEKDPWSSIQLVFKPQILQRIFEALELEKYYGKNKYTGMKRTFNDIMREIEID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF71</accession>
    <name>A0ABV2AF71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000307</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000042">
        <property type="protein sequence ID" value="MES1918325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="18907" checksum="2E6C22FCB336390D" modified="2025-10-08" version="1">MVKDVSDSELAERLHREISLTPPPHIFKLRYNGSVLEYVRKLPLFVVLDVIAKSVNHFFDSAIIGSLYYLDTASGIGASAGVLSHDISQVFSLSKVSWRVHSLSFLRVVEEGVCVFLCSRLFSRFAWRHLGLFYSQVHQEHTAVHSVALGRELPILGAVGPSSSYYAQAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH8</accession>
    <name>A0ABV2AFH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Mitochondrial ribosomal protein S9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000383</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000059">
        <property type="protein sequence ID" value="MES1918415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000754">
        <property type="entry name" value="Ribosomal_uS9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020574">
        <property type="entry name" value="Ribosomal_uS9_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21569">
        <property type="entry name" value="RIBOSOMAL PROTEIN S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21569:SF1">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US9M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00380">
        <property type="entry name" value="Ribosomal_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00360">
        <property type="entry name" value="RIBOSOMAL_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="53"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="252"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="264"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="283" mass="32261" checksum="9E8DC33CBA457675" modified="2025-10-08" version="1">MLRTLTRYSLKRTAQKALHIKQSIQMRLRSDDAEEQEKKNIEENIKFMHEKVKANGIYTGDEGEKELESESEDDSEIEDDELREGLEEEEIDPFGKLSGNPHVKFGQERIFVRDRYGNVMTHEDFEKRGDENIRHLQVDYPERPDEASPKSAVGTGKRKKAVASASVRKGAGSILINEQQLHQFFPRLTHRAQIAEPLIMTDLVGKIDIECTVRGGGPSGKSGAVATAVAKAIRSQNPEKWPDWVEGQDRDSLSLLATSDPRRKEKKKIGRKRARKGQRYQRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS3</accession>
    <name>A0ABV2AFS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000484</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000076">
        <property type="protein sequence ID" value="MES1918521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="83"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14565" checksum="F6E8B99CDB20265A" modified="2025-10-08" version="1">MICSINGVVLPSFEFDLQAYVRRCEQRNEPFIRLSQTYYDEMKAIQEGFPKQISTLMEDDISQIKANRQNFAMAFDKFTKAEKKGSEAVKEEAKEKVEKELEKFEKNIEKLMETLSFLIFVCDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG34</accession>
    <name>A0ABV2AG34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000206</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="645"/>
            <end position="662"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="663" mass="74686" checksum="69580421DE030971" modified="2025-10-08" version="1">MTILSESENIAEHSPKKLGSLPDELKRPNEQRSPFEDITVTLFEADRQTPLDFPVALDFEPSNTSYEIELAEVPSEAKFVTFVSKLSEPVPVSHSVNNGSESEVISWDAEPYSFCQAPFELPLHFSAQTENGHTLSVKLEHSAQNEADENAGEENGLAASLEENGRPPDEAFLLGAKKPAIQSLELYLYKNRLDPLRPDSLIREFSAERKVYDVRLSEDDAAANFISLRSEAGKGCEVEFKDSDGHGGVAWKETPQVFNGQFELKQLSADKSKIRSFTVTSSPENGPEDRYTLNLHFASDQNELVDAKAAPPNIGATPKMPALTMLSDNSFLVAGDNVKDYDFTFDPPSDFEFVSRENDDKQTLLKLKHDLNADENGLVSIRVQLKKDPSKEARHVFKKNPDAISSEPKLNAEDVLDSFEKPEIAPSDEDGNQNDAPLAINDLPQIEDLADFAKREAQPPEVIEAPPKPVEDEKELQPRNVVSLDKLLDKFEEIDRNAVAEKKMIGTEMEVQTEQLAPPTDELGEIYKFQEQIYPFTGEQTQRERFAGELNDHPVDAHLQNKSFGNQYNDWKMSEKREAEVMPDFRVNRRNEPIHNPQFYLGNEKADFHRSAPFAVHGALPEFVQEYRLDLGKPKYGLSRMKKNSITMTFCLMAFCLVWSFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF5</accession>
    <name>A0ABV2AGF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000672</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000119">
        <property type="protein sequence ID" value="MES1918761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06089">
        <property type="entry name" value="KOW_RPL26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003256">
        <property type="entry name" value="Ribosomal_uL24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041988">
        <property type="entry name" value="Ribosomal_uL24_KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12903">
        <property type="entry name" value="MITOCHONDRIAL RIBOSOMAL PROTEIN L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="412" mass="47853" checksum="052C90B9A2CD0090" modified="2025-10-08" version="1">MMRISKIRFPATTIKNQTYFFSTKTTTAQNRKNRSLYDDNKSEANKMINKKIDAKLDTLKPHEKPTFPYHFRKRAAQSPTSFDNYQKEILPKKIQNMRRANKIKNKTSHADWTFWLHDEVKVVKGIHKDQEGIVSQYFRELNEVVVKGVNMYIENPSTNDENANSGIYSVEGPMKSDFLKHFGYETATIAFGDKLDQNLVKKAISKRLNLCDFCGEFQVQLIRDKSITFSLRLPEKDCQNTHKGIERLSSLKPSEYLTLDDNSIYIEQVEVHTKPEEILNVKMVSVPQKPFCKNQRVVSMLENHFSKRGTVTETYLNQILVKFDDEEKVSGPFNTFYFAALENGKIVKNTPLLTYNKRVVYKLLSNKVFPFDLISFPAKPKPKTMMQTFYEFPQTENFHLNTSVEDAVSKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK0</accession>
    <name>A0ABV2AGK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000719</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000131">
        <property type="protein sequence ID" value="MES1918816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="51"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22674" checksum="D305594B4DCC2779" modified="2025-10-08" version="1">MGNISCRENNLSRQLNDIIVDISNQLADTKSDVLEKKRHLKKQKATLISFRRKLEKREEDIKKYLSDIETEKEKEEQKLTQKRDELEKESQSIKIAVKKLAQQKEKFEREKDLFEEQKDKFEREKKLFEEQKIKFECEKIGESSVLETNTELDEKKNDILRRSQFTEKMEQPKTFIYKKEDQVNLLEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK2</accession>
    <name>A0ABV2AGK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000127">
        <property type="protein sequence ID" value="MES1918796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="109" mass="12711" checksum="FAB244D735747E74" modified="2025-10-08" version="1">MINPLYYCDFDIFRTNFLQLKTILLDLLVKSSPELKNEYIQFVRDLGVLGSSDLSVVIDRYKNKKEKIFLKHFNQTGNNLCCRILNAEQILINIRSHSDNPPAIPALYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGM4</accession>
    <name>A0ABV2AGM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000567</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000096">
        <property type="protein sequence ID" value="MES1918624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="22348" checksum="FE060540815CCB45" modified="2025-10-08" version="1">MSAYSSQIVMAFIVSFLAGLFTILGALVLFIKPIRKNNIVFVVYGNLFAAGAMIFVSLCEILQVKSVGAMLAHFCPDYSEECHSKHYGKTLGICYSLFFAGCVFCFAVNSLAHALLNRSENLFLRYDPDRNPETDEDIEKQFFVHFQKERNEVVLSDGTVHLRRPSSAQHSRGTGHFCNHLQRYRRRDNSGDSHRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH23</accession>
    <name>A0ABV2AH23_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Endonuclease/exonuclease/phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000842</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000166">
        <property type="protein sequence ID" value="MES1918958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Endonuclease/exonuclease/phosphatase" evidence="2">
        <location>
            <begin position="8"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="341" mass="39025" checksum="02FC2EC0080901D8" modified="2025-10-08" version="1" fragment="single">MPKQIRALTYNIFTGKIKADENRIISQIQEIIKLDCDVICLQEAWDRKVIDLYKEFMAKQYDIITCNSNFNSEEHPTLLLGRGGFCQRVCEMLLPLLAISICIALVLVYFLNGRFKPTLLTLLLFNVVIFLSVIISVFGGSFLAWIWRCCKLPQHGFISGDILGLMILVRNGKNRDGVNVRYVEGSAYAEVFSNQAAKSVWKLFGFVERFFIVKGYLSVDVIVDQIRLGVTNIHLNTGTRNKLRMKQIKELFKKAIPANQPNILCGDTNAEAEQPEIQWISGRMVETYAVKRNTKNRRSSRGDGFTWHDQNPLTRQGFGKFFEKNLILFITKNKNGQILKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH46</accession>
    <name>A0ABV2AH46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000901</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000181">
        <property type="protein sequence ID" value="MES1919023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22852" checksum="9D34E3E03E11CB97" modified="2025-10-08" version="1">MMIGHPYGLEMKISLKGNVILEFGNLFSCDLDSFVGNSGSLVANAENLNIEGILVRGNDDFFWNKSRKCAQIKRYEKGQEIVMKPTTFDHVLQNTIFLKPHGKVVVPYQLDNRKFKEFVYFYVVNPENEKKHFLLQISKDSYEFASFNFAYESKNVPESFLNKKKFVIKYLNINLSLQLFDVTNVYCRYRKNRNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH94</accession>
    <name>A0ABV2AH94_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">2Fe-2S ferredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000929</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the adrenodoxin/putidaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000188">
        <property type="protein sequence ID" value="MES1919055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001055">
        <property type="entry name" value="Adrenodoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018298">
        <property type="entry name" value="Adrenodoxin_Fe-S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23426:SF72">
        <property type="entry name" value="2FE-2S FERREDOXIN-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23426">
        <property type="entry name" value="FERREDOXIN/ADRENODOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00355">
        <property type="entry name" value="ADRENODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="2Fe-2S ferredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00814">
        <property type="entry name" value="ADX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="6" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="10">
        <location>
            <begin position="27"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00034078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="15940" checksum="169608A5CD696027" modified="2025-10-08" version="1">MLYHRSLNRICNNFSQNFFKKTTRYFVSIKWVDSDGIETVTKAKIGDTLLDNAIKNNIELECACEGSLACSTCHVILDENTFESLPAASDKEDDLLDCAFGLTETSRLGCQVIIDKEMKNVLVKIPSATRNMSVDGYKPPRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHB9</accession>
    <name>A0ABV2AHB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000937</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000190">
        <property type="protein sequence ID" value="MES1919066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051270">
        <property type="entry name" value="Tyrosine-tRNA_ligase_regulator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11586">
        <property type="entry name" value="TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11586:SF43">
        <property type="entry name" value="TYROSINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10332" checksum="51CA110ABD6F269F" modified="2025-10-08" version="1">MVLCASSEDKSIIEFIKPPKESKIGERVYLENNSALNRSPDETVNAKKKNSAWALAFPDLKTDSENIACYKNKPFLTSKGKCCSTTLKNCQIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI2</accession>
    <name>A0ABV2AHI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000988</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000204">
        <property type="protein sequence ID" value="MES1919123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14983" checksum="8DE67A6F8576BBDA" modified="2025-10-08" version="1">MFYEPIIIENSKKWNMGENLKEDTHKSLSRHIREMADYFLEGLERINLISSYAERTRLVYAVLIDTLPYRIRFGDDMRVRAVGMPSLAFDSGVRVGHRLLRIDGMEPSRRAIKIAKKKLPIKLIFSEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV2</accession>
    <name>A0ABV2AHV2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="136" mass="16067" checksum="AE510205BF3161EA" modified="2025-10-08" version="1">MALPKLKKLPIMAKKHFSLIKIKNAKQKYLPILLVFVTTIVGSAVKDLLDLTKTIFTFSKEKFVCFELKLLRYLQNKYPNVRREDKDTKNKIAFLKNGDVYLSGAIRTQFFNFIQCRTKHNEFKRNLKMKYTEKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX8</accession>
    <name>A0ABV2AHX8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001073</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000227">
        <property type="protein sequence ID" value="MES1919212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="12670" checksum="64DC01099EE0DE31" modified="2025-10-08" version="1">MFSVSLFLESSCSFSALFESSSFSSWATFSLRNCILVASSTISFTKTRFVTFAALFANESDFFVSSTNALDGVIVTITTVLEFPPKAGCKIRVNFESRKGMCDKFLFCQKIFNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY7</accession>
    <name>A0ABV2AHY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001132</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000243">
        <property type="protein sequence ID" value="MES1919273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7431" checksum="A61DA7B656DF36ED" modified="2025-10-08" version="1">MADPVAASFDSVPGLRVGRRPDVHLGVHFLPRNEEEQNRKRNDKVEDDAEPGNQIESFVSAKLNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI04</accession>
    <name>A0ABV2AI04_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001162</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000252">
        <property type="protein sequence ID" value="MES1919307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="111"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="23417" checksum="75B101D289DE1543" modified="2025-10-08" version="1">MGNLNKTQFHRMFNNVYNKNKYTKSEIYYIKTHKMVKELDNLSNLNIKLAREIIKSIAEQRFEVQKSKDANSRKVLEAISNHDKKLWIDHAFRLCKAKPEKRKVADEKPQMTKSKKYLDNLETKLIEANKKSKEIEEKIAKNPLLTTTDFSFVVEKAEETKIIEKSEKMETNDKKLQNFRLFCDEMAENMGELDDSIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI89</accession>
    <name>A0ABV2AI89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001237</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000277">
        <property type="protein sequence ID" value="MES1919399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="468" mass="55764" checksum="F7C803F14D17BC57" modified="2025-10-08" version="1">MIFETENLRFYKRLCKAILKFWGLIDYKNVHEHILYRKRTSLTDLTKFQFKNQNESEQNRLKSFAFLFLTKLVTAQKNFIFELRPILTSLYSNERTESKIIEKNIFKNFVQKRLKEILKNDPNNLAVYRIFIIFKADNKQKFIKKTLTALNMSKKLSNQKIFSDFIWKNFEIEAISKKRLLINKEKLLLLLLDINDKKFYPNTKNIKSRLNKFLHKFSNFDKMDFSNDNKCDNFLIFILQNLLQSKTENLSVISNLQITDYLERNRVVLLSKSLKLLYQADSKFANGNIGDLAFKLFIAFPSEIATIDLLFEIIKKSNPLKLKMLFSEFSNPRCEKIKFSYLIVVLKLLKANGQQINLVNSARRTFEELLRNPKFRNSSIFWKLYTDFEIKCNRKVIEKMEMKKFKPGIIREIESSSSQSFKIFKRAVYGNPLQEWLWKEGFAYFKKEMSLKEKIGLVMILLQTQLFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ0</accession>
    <name>A0ABV2AIJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Serine/threonine-protein kinase plk1</fullName>
            <ecNumber evidence="9">2.7.11.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">PLK1_1</name>
        <name evidence="9" type="ORF">MHBO_001118</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.21" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000241">
        <property type="protein sequence ID" value="MES1919259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24345:SF0">
        <property type="entry name" value="CELL CYCLE SERINE_THREONINE-PROTEIN KINASE CDC5_MSD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24345">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE PLK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="8">
        <location>
            <begin position="23"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="21157" checksum="E5DF4060A882F4C3" modified="2025-10-08" version="1" fragment="single">MSPNLIKHEYVDPKTKRSKIKKYERGEMLGRGGFAYCYAIESFDTQKKYACKIISKSKLKKKTTRLKLITEIKVHKLVSGHKNIVRFVKWFEDKERVYIVLELCKNKSLLDLVKTRGKLTESEVRYFMAQILSALRHIHSNNVIHRDLKLGNIFVCSNYMLKLGDFGLATKLEWRSQRKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK6</accession>
    <name>A0ABV2AIK6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA mismatch repair protein msh6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MSH6_3</name>
        <name evidence="2" type="ORF">MHBO_001337</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000314">
        <property type="protein sequence ID" value="MES1919521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1170.10">
        <property type="entry name" value="DNA repair protein MutS, domain I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.110">
        <property type="entry name" value="MutS, connector domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007695">
        <property type="entry name" value="DNA_mismatch_repair_MutS-lik_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016151">
        <property type="entry name" value="DNA_mismatch_repair_MutS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036678">
        <property type="entry name" value="MutS_con_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01624">
        <property type="entry name" value="MutS_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55271">
        <property type="entry name" value="DNA repair protein MutS, domain I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair protein MutS-like N-terminal" evidence="1">
        <location>
            <begin position="78"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="248" mass="28781" checksum="832FE633428B129C" modified="2025-10-08" version="1">MRKQKSIFAFFNKNEDLKTQKMPQKMPQKSKKIKNITKKLISRKIGFVEMDWFKNPKFAIEKDTKKLKIPPSAFKKMTPSVKRYFEIKSLFWDFIIFYKVGKFYEMYDNDAIICNRELGLNFMKGEKRSHVGIPEKVYAKNAAILVERGYKVVRVDQVETVREMAIRKKKKIGPTVVKRDITKISTPGASGGLNGNLANLKLDSKDSVYLLSIKEEETENKNSKIGICFVDSETSKVHFGEFEDDCHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIU6</accession>
    <name>A0ABV2AIU6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001408</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000339">
        <property type="protein sequence ID" value="MES1919608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="31020" checksum="FA3E576D525FE623" modified="2025-10-08" version="1">MRKTKDSNNCRNCEQKIIRVLTNSGFSDKTVDLFFSNKNIQRNWSDCKNFVKKIYSKRIPFSKNKCVVKVKCGNTVIEEVHSFHISTSSASFRKMKVKNQVFNELCVFHQNGIRIYLRSLQKIFLERFIPENNSPFHIFRHDFRDDKIKMSVNYPKNLNTIPEVELLCKNNRETLNLSKKEDQKNYILRVYSGNFEMKKHSIIGDTEFDNKSIAFEEIEKLYRRLKDYIDKGFNYSKRKISKVLNYQIEELNFSDFNPEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY9</accession>
    <name>A0ABV2AIY9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Thioredoxin-disulfide reductase activity</fullName>
            <ecNumber evidence="9">1.8.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">TXNRD1</name>
        <name evidence="9" type="ORF">MHBO_001191</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.9" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000260">
        <property type="protein sequence ID" value="MES1919343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046952">
        <property type="entry name" value="GSHR/TRXR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42737">
        <property type="entry name" value="GLUTATHIONE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42737:SF7">
        <property type="entry name" value="THIOREDOXIN-DISULFIDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00411">
        <property type="entry name" value="PNDRDTASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="8">
        <location>
            <begin position="9"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="18980" checksum="F258B4B8A99CED76" modified="2025-10-08" version="1">MNTQLKKTFDVIVIGGGSGGIACARECAKLGANVAIFDFVKPSPFGSKWGLGGTCVNVGCIPKKLMHYSSILGSKMDHARTLGWNINGNDAVVHKWDKMVEAVQCHLKSLNFGYRVDLMKNKVTYLNSFARFKDRKSIEYEENGVKKELMAEKIVLAVGGRPKFPKFLFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ09</accession>
    <name>A0ABV2AJ09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001457</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000360">
        <property type="protein sequence ID" value="MES1919666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20344" checksum="DC030EAEC57F1F3A" modified="2025-10-08" version="1">MTSLSRARWYAFNDFTIRHGTKIPKHFTIKTSADVFTDPKLKKLPLHMKLYYMFPKPFMFEMAYRVENPAQSLDVLKKQILMARLEYWYRKMASVPYVFNAAVIELKYLLGVLRDPLKMNGMHLQWLLALAVHCFGFFLFGEMVGRFKIGGYGVVSTDWFSSEEGFRFSPVVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ30</accession>
    <name>A0ABV2AJ30_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CLASP N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000362">
        <property type="protein sequence ID" value="MES1919676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024395">
        <property type="entry name" value="CLASP_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12348">
        <property type="entry name" value="CLASP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CLASP N-terminal" evidence="1">
        <location>
            <begin position="2"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="47" mass="5199" checksum="D7A9FC03DBF45044" modified="2025-10-08" version="1">MLRDANKSVRRSADSTFTSFAKKWPAQAQSAFDKLAPSDKKLISANL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ62</accession>
    <name>A0ABV2AJ62_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 9">tRNA (guanine(26)-N(2))-dimethyltransferase</fullName>
            <ecNumber evidence="7 9">2.1.1.216</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">TRM1</name>
        <name evidence="10" type="ORF">MHBO_001319</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>guanosine(26) in tRNA + 2 S-adenosyl-L-methionine = N(2)-dimethylguanosine(26) in tRNA + 2 S-adenosyl-L-homocysteine + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:43140"/>
            <dbReference type="Rhea" id="RHEA-COMP:10359"/>
            <dbReference type="Rhea" id="RHEA-COMP:10360"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="ChEBI" id="CHEBI:74513"/>
            <dbReference type="EC" id="2.1.1.216"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.216" evidence="7 9"/>
    <dbReference type="EMBL" id="JBDODL010000309">
        <property type="protein sequence ID" value="MES1919499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047148">
        <property type="term" value="F:methylamine-glutamate N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.56.70">
        <property type="entry name" value="N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002905">
        <property type="entry name" value="Trm1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042296">
        <property type="entry name" value="tRNA_met_Trm1_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00308">
        <property type="entry name" value="TRM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10631">
        <property type="entry name" value="N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10631:SF3">
        <property type="entry name" value="TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02005">
        <property type="entry name" value="TRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51626">
        <property type="entry name" value="SAM_MT_TRM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 9" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 9 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="1 9" id="KW-0820">tRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00039099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00051897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="483" mass="54757" checksum="44D368146EB9955D" modified="2025-10-08" version="1">MDQSQNDKKQKLVIEGKTKIKITENSFYNEAQVLNRDLSVAAIATFIKYIQKKDDIKFRRNFELNGDKINFKKKVVIVDGLSASGIRSIRYANELEPKKHIEIIANDIDPKSVRLIKENCDLNKTSERVQIRNSDLKFSFAQQSKFLLTNEDDLTIIDLDPYGSAAPFIQNSLNSIQDGGLLCVTCTDMRNFAGLNTGSCWSHYNAMTTRGKYCHELALRILLGHISRTASGLKKHIVPLASFSINFYVRVFVRVLKSPSAANSSCRQNGHVFVCSDCDSFKTQRLARINGNGDMKPVLVDPNASKCEVCAGRREMIGPIWCDRLHDELYLEELIGQTKKLDFLERQSEAVSLASLAKAEIEAPFYVNLSALSKKIRCGSISNRMFGRGIVNSGYRISRSHIKPEFLKTDAPFSVIWAVLIKHFENSPPKEENDLMRKIRSTTEALKIEVDFEKKGEELIQKGVFKFSWRGKSWGPKKKIRLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ80</accession>
    <name>A0ABV2AJ80_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">GDP-D-glucose phosphorylase 1</fullName>
            <ecNumber evidence="3">2.7.7.78</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001510</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>GDP-alpha-D-glucose + phosphate = alpha-D-glucose 1-phosphate + GDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:30387"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="ChEBI" id="CHEBI:62230"/>
            <dbReference type="EC" id="2.7.7.78"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.78" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000382">
        <property type="protein sequence ID" value="MES1919730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026506">
        <property type="entry name" value="GDPGP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058865">
        <property type="entry name" value="GDPGP1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20884">
        <property type="entry name" value="GDP-D-GLUCOSE PHOSPHORYLASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20884:SF8">
        <property type="entry name" value="GDP-D-GLUCOSE PHOSPHORYLASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26216">
        <property type="entry name" value="GDPGP1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GDPGP1-like C-terminal" evidence="5">
        <location>
            <begin position="71"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF26216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="22015" checksum="F99C34316AA6DAE5" modified="2025-10-08" version="1">MQKLPINSPFRIAFNSLGGQASVNHLHFHLFSSNLFERTEGEKVVNKELLPIETINFPLKNGFGAVNDPLVHPSRFFVFEMGLKNLVERTIKCIKTLQLKEIPHNLIICPRNNEKKYRVFLIPRKRNNKKSLNAADITIACLEYAGLFCCKRATDFENFGEKEFAEFLLNENIENEEFEHLKSLFEELSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ86</accession>
    <name>A0ABV2AJ86_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PPIase cyclophilin-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000381">
        <property type="protein sequence ID" value="MES1919725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="1">
        <location>
            <begin position="16"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8036" checksum="FD4E59CF4C3F2DA1" modified="2025-10-08" version="1">MDRTFVYEPKTEGKLVLHTSGGDVNIALWPKAAPKACRNFLQLSADVFVSNKGLLRRLAVPSRFAGQTRFPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB2</accession>
    <name>A0ABV2AJB2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001547</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000396">
        <property type="protein sequence ID" value="MES1919776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="400" mass="43837" checksum="BAD1AE9E0D68C299" modified="2025-10-08" version="1" fragment="single">MVHADVRRRADQNLPALPLRQMVHNRRRRHRLPRPRRTLDQTKRLLHRVPQRLLLRLVQLGQPRRAHFGRQVGGDVLRADLVAQEHVVEKARDRVVVVGEAVHGVLHARVGHRLPNEVDVEAEGLRDGRVLAAVELDEDLVFGGDLEHDPVAVPALVHHVPGVVQDDLVSFDDARAPLDVPVQPEVEALPAPEPRGPTDGDALLLLCLARLAVEVGLEGDQRLEDAREGGRVGVAHHDGLDLVFEFLAVEVGERRAVVAVFPELLQLAQLRGGGFQRARHLALGRRLHEPGQEGALLDERDPLRQVPVHLLERVERETGLSAEQDDDGVGFGGDEAEKEDVLATAVEALERGVAEDAVFVQSDAFVFGAHQVIYDVGARGAALVVAEPFFAVLAADDRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC2</accession>
    <name>A0ABV2AJC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Exportin-5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">XPO5</name>
        <name evidence="4" type="ORF">MHBO_001368</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the exportin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000326">
        <property type="protein sequence ID" value="MES1919559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013598">
        <property type="entry name" value="Exportin-1/Importin-b-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045065">
        <property type="entry name" value="XPO1/5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11223">
        <property type="entry name" value="EXPORTIN 1/5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11223:SF3">
        <property type="entry name" value="EXPORTIN-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03810">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08389">
        <property type="entry name" value="Xpo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="2">
        <location>
            <begin position="31"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="Exportin-1/Importin-beta-like" evidence="3">
        <location>
            <begin position="107"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="343" mass="39657" checksum="AFF4E389DF25833A" modified="2025-10-08" version="1">MDSDTAKNIAMIKEAVLIHHNNPNTEAFKNAHLFLQKFRSDPSCINICLQICSIHESDEIRHFGLQTINMTINSHWKSFSPDQLSTIKEMCTKLITQGSKSVLQEKNYLKEKIVEIVCSVAINGWPNKWPNFFKDLLKISDHSESSLELVLKVLQNLRIETEINFKLPLLRRENIKQSLKSYNGEIYGLVEATFQGCVQNLKNVKTDSNNKMESVALSEALINSALDCLNPNIQFPMEYIFRDEMVDLLCLLCKQPAFFKKSMRCLTLICSKKHIVPQNISSKLYRDKVFLVWQTAIEILEAIISQNHKMDDFEQHLELCVDVIKFLIVNHKKITYRKSQNSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF0</accession>
    <name>A0ABV2AJF0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MYND-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001316</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000308">
        <property type="protein sequence ID" value="MES1919493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="6">
        <location>
            <begin position="6"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="53"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="67"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="31890" checksum="A85A449B46871801" modified="2025-10-08" version="1" fragment="single">MGSYRCFNCSKEAFEFILRCCRPPEFGKEVVYCCEKCQIENWPKHKKICERNKKPKKTALPNKPRKQSLNGSPITDSTSKSALKQTILHNETTSEKDDLELEDVLKYAQNENLIKDEFELIKEIEKDKMCLKNAQFDFKPIFEQTDEEKAIETQNKEQFSLIKNNDSSSEEKPIQWHRPQTDNSRKLQVAVMSKENGMKHIILRYIFNKLKNGDFEPIDFNLEHIDSTFEASFDILENYEDFLLISRRNDSINNFAAITFEADFSPISDQIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG3</accession>
    <name>A0ABV2AJG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Unconventional myosin-VI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MYO6</name>
        <name evidence="2" type="ORF">MHBO_001562</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000403">
        <property type="protein sequence ID" value="MES1919798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8659" checksum="3DDCF23067929C81" modified="2025-10-08" version="1">MEWAKGGDLYSLVYNRLQDSKNGKARVTNPEHPHIKSRFEPQWLSESEILRVVLEISEALNSIHSAGYIHRDIKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK8</accession>
    <name>A0ABV2AJK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001363</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000324">
        <property type="protein sequence ID" value="MES1919553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="301" mass="33688" checksum="D21A1FE67CC9ED1E" modified="2025-10-08" version="1">MEDIFRKAFLPVSKISPKTNSILEICLKSLIKNLTKSLKLKEDILINSDFFDKIISEFSNRFEETQSNEQLFKTFLSSVVISNDNNKMLSELENTKMATIHKKYFESCNRAIINFIESGTLETAMSLLLLVTRATPSVGIKIANQKQILQAAVDISHDKSNKIWLSAAEILALGCSNKQIRLTIVDAELYQMFAELLLQNFAEKTVYADKDNIAKAKTTSVALLALSKLTAMSQKVKDFVLNFRLSGNGENANIEPLAIVSAFSVLEKLKNSEEQIVSDIVEAISFLSVHIEIKQIICNNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJX5</accession>
    <name>A0ABV2AJX5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001706</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000462">
        <property type="protein sequence ID" value="MES1919965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008506">
        <property type="entry name" value="SND2/TMEM208"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05620">
        <property type="entry name" value="TMEM208_SND2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="19"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16041" checksum="D45A74004879D564" modified="2025-10-08" version="1">MAKGAYKKQSKLSKDTYRLYLKINLIISLVFFTSSVFKIDKLRYVTPGIVIVLLETFLIKSIASSIKDGYSPTYYQDALFISWFVHLTSIYSVWTWLFFLIIPAYALYKLSSFLCMGYNLRNQMNGSENRSQRRLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK52</accession>
    <name>A0ABV2AK52_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001781</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000496">
        <property type="protein sequence ID" value="MES1920056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045877">
        <property type="entry name" value="ZFP36-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12547">
        <property type="entry name" value="CCCH ZINC FINGER/TIS11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12547:SF18">
        <property type="entry name" value="PROTEIN TIS11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14608">
        <property type="entry name" value="zf-CCCH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="83"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="121"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="5">
        <location>
            <begin position="83"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="5">
        <location>
            <begin position="121"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="20980" checksum="EC02AE234187E26B" modified="2025-10-08" version="1">MNGKLRNKGLNAKAYNSFRITTAQSEKKIFCENIKYENASNLAIKPEETNRKLIESIFRSNGASSLNQSFALNQDVAEIDVTKYKTELCLNWMTLGKCPYGNRCNFGHGVNDLRANRRVRNYKTQMCCDPARQGGHSCAFGAKCNFLHPGEALRKNFSKSYFENEYVSELEAIFGDNETPFGVYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK78</accession>
    <name>A0ABV2AK78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001794</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000502">
        <property type="protein sequence ID" value="MES1920075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="120"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="281"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="362" mass="42284" checksum="4BB92418CF2AA455" modified="2025-10-08" version="1">MAEEEKRSGGALDDEMIFLLESINSDAHSIFQDNNDYLDTFYPPFSNKITKSEQDGTAIYSEKKRGQESESIFSSETANFNLSGIPETQSTFSTESKPDFMFKPDFIYKNVKNEKPDLQIELQKRELRAEKSRKARLRKKLHVEKLEQEVEQLQKMIKESLKRKHDPETTLNYQNRFLNPKKKKSAHFKQQKDKSIVIDVSKIKKVCEKSANSSKERLTKALYYLESVGDCLVPGNQVKFLLWIFTQKEEFYSKRLPESLFKGLDIPTEKIKKALKDRNVMKNDRDKMEFLVERLKKLQEKIKEHLVGASALANKIRSQLSSDQLMRFFRWMKATECKEIMGKISETEIFKNPVQPPLITVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK98</accession>
    <name>A0ABV2AK98_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001822</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000514">
        <property type="protein sequence ID" value="MES1920106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01894">
        <property type="entry name" value="EngA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43834">
        <property type="entry name" value="GTPASE DER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43834:SF6">
        <property type="entry name" value="GTPASE DER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G" evidence="1">
        <location>
            <begin position="36"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="G" evidence="1">
        <location>
            <begin position="248"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="376" mass="42058" checksum="F4FA5BB43C8C8C13" modified="2025-10-08" version="1">MLKAFRRTFSKTSFVKAKPKLVDKNFALKNFIGPLIALVGRPNVGKSSLFNRLAGKEVAIVHKTAGVTRDRKLGQGYLSDLKFIMVDTPGFCELSHKEKQDLKNVRNAMVRQSELALKNAQMALFVVDSSDGLTADDYSFCKWLRSQNLNKNLKNNIILVANKADGKNKNSFADDVYSLEMGEPTYVSAKHNEGMADLYKTLQPKIDKINQSEKIYNIVDAFDLNKFSQMVKEKDPLLKSDKNKSLQFAIIGRPNVGKSTLANAILKNSDISEQRTEFSREDRVVTSPVPGTTRDSISINLVFRNRFFKLIDTAGLVGPGRMSWKSLEREVSASMDDTLKSVQFANVVCLVLNIGENTIAQCFSANIDKILIHFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA6</accession>
    <name>A0ABV2AKA6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001474</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000366">
        <property type="protein sequence ID" value="MES1919687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041661">
        <property type="entry name" value="ZN622/Rei1/Reh1_Znf-C2H2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040025">
        <property type="entry name" value="Znf622/Rei1/Reh1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13182:SF8">
        <property type="entry name" value="CYTOPLASMIC 60S SUBUNIT BIOGENESIS FACTOR ZNF622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13182">
        <property type="entry name" value="ZINC FINGER PROTEIN 622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12756">
        <property type="entry name" value="zf-C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="1">
        <location>
            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="235" mass="28440" checksum="557D3C5F6B3F3898" modified="2025-10-08" version="1">MQKIIEKQISIFCQSCKIEVQREQNGFDHYRTDWHCYNVKLKCSAKPPLTLQQYQTFVLVDTNVKKTFKCNDCNFFRLNFESDFFWILLKQYFAKIKRKNFKSENAFKEHKLTRKHLKKLKSVCGNSGKKRNFVDSEFQCLFCQNGFDKQEKLDLHFNEHGFFIPYKESLKSLKTFLVFLREKIKIGQCIYCDRKFVVKEKFNPAQFHMVWQKLNKDRQKSLQIERSQKSIFCRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD5</accession>
    <name>A0ABV2AKD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000416">
        <property type="protein sequence ID" value="MES1919838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14172" checksum="DA1D286699595F20" modified="2025-10-08" version="1">MDKEEREKYLKFLRMLRDDEMSDFSDLNEADDEDFVLSTEENSGSEDNIYKSPKSAARKKSKFFANQSGKISHLIKKDQISTILEQIKSVCKTFNSKIAHSVIVANLIRLQKYFDRQKQRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG4</accession>
    <name>A0ABV2AKG4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001877</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000539">
        <property type="protein sequence ID" value="MES1920175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="108" mass="12726" checksum="88EDC7FE11BB2456" modified="2025-10-08" version="1">MSSVIIDINIAFMLYAAILMIYILISALRLGKTNQNVDFDGPQENEFELKEIRNSNCSENFDLCKISLENNSEELLRRIRDEERYEEDFETLKTLTFEQLFDKNGEDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN9</accession>
    <name>A0ABV2AKN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">T-complex protein 1 subunit delta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001941</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000570">
        <property type="protein sequence ID" value="MES1920250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="93" mass="10123" checksum="194D9FEF8D3361A1" modified="2025-10-08" version="1">MCAKAFAEAMEAVPFTLAENCGLKPLEIIGELREQHEKGEGRMGIDVRKGKVGDMEKARVLQPALVSLRAVALATECVRMVLKIDGIVQTARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP8</accession>
    <name>A0ABV2AKP8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001753</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000481">
        <property type="protein sequence ID" value="MES1920024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="344"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="344"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="360"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="464" mass="54759" checksum="B131A417D6C8606A" modified="2025-10-08" version="1">MADLYNRKRDKYKNSTSKEVKNILKYMKRMIIAMTNLYHRVKKKHIKKEDLSKNIEKRWKKAFNQKSDITRKEGALNEIEKNFDKKSVSYKNIATIKKPSIEGVAVIDHKVTNKERNILTRFGDNFSYEQSLEEDIKSMIDLYTVKKNELKNIASPNVKFILEYMKSKIDKITDLCNRIKNKRTNFKIANDFDRKMNKRVSKTNEGDFINENNVTKEDKNAITKDIATIVATEEKNYFNKKKMILEKVASIIARLMEGKFGPKKENDILNQKKSMPKVKIIETGNYLELNKMVFHEKGIKGTSFCNAVKEDEDKTIKNNKNELPLNNKVKCFYEVNLNISDNTKSAEKKKSEYEKLNPQNKKKRRRRRHSSHKKKDNTDKQIAVTKAEKSKGTESHQTINKNEMLLKKIEKTDLQKPKRSIEIMKLHLQKTCTKRSDCFTCWRQKNFDNCHRKKFVEENKCKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ4</accession>
    <name>A0ABV2AKQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001942</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000570">
        <property type="protein sequence ID" value="MES1920251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05348">
        <property type="entry name" value="UMP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14446" checksum="3A4DC843BC4209A5" modified="2025-10-08" version="1">MNKSFLSTKDALKQDIKGDLTENLLNKISSLEISDIETAVRQRKLDELEIKKNLLSKIYGDHFFNTIDNELKFFSAASRLPGLKQSYFGLDILLNLDEDIDFDDINEKDIVETSKFDLKEELEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL52</accession>
    <name>A0ABV2AL52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATP adenylyltransferase</fullName>
            <ecNumber evidence="3">2.7.7.53</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">apa2</name>
        <name evidence="3" type="ORF">MHBO_002078</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.53" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000653">
        <property type="protein sequence ID" value="MES1920406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003877">
        <property type="term" value="F:ATP:ADP adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009163">
        <property type="entry name" value="Ap4A_phos1/2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043171">
        <property type="entry name" value="Ap4A_phos1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045759">
        <property type="entry name" value="Ap4A_phos1/2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019200">
        <property type="entry name" value="ATP_adenylylTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38420">
        <property type="entry name" value="AP-4-A PHOSPHORYLASE II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38420:SF1">
        <property type="entry name" value="PUTATIVE (AFU_ORTHOLOGUE AFUA_5G14690)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19327">
        <property type="entry name" value="Ap4A_phos_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09830">
        <property type="entry name" value="ATP_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="HIT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Ap4A phosphorylase 1/2 N-terminal" evidence="2">
        <location>
            <begin position="5"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="ATP adenylyltransferase C-terminal" evidence="1">
        <location>
            <begin position="185"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="292" mass="33443" checksum="E50A4AD61EE5556C" modified="2025-10-08" version="1" fragment="single">MPEISLLNLVKEATKTAINYKTLSPIRTKRHSFYTKKGFEETKSPYYSIYVSSEPEKISLYKKTTNEKPFLPPFEKGLLVMDSDQFANLCEEGKDYRLFLNKYKVLENHLLLTSKNFRAQGDRLSSSDFRATISLLLSVDSFAFYNAGYNSGRSVDHFHLQVMPYSSISGNFFSTVLSKKSKIREFDFAHYFYTFDTNAENLESTLLACYNDAMESARRQLKKDRFDYNLIFDRQRLLLVPRAKPCAEIQIKQNLPGEKGKTRGSLASLQINALGFCGSVYADTKEIADAID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL1</accession>
    <name>A0ABV2ALL1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RPN1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001974</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000588">
        <property type="protein sequence ID" value="MES1920288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040892">
        <property type="entry name" value="RPN1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943:SF1">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17781">
        <property type="entry name" value="RPN1_RPN2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="RPN1 N-terminal" evidence="3">
        <location>
            <begin position="48"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="25"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="467" mass="52410" checksum="E9B07C76E29DF040" modified="2025-10-08" version="1" fragment="single">MANKKIKKKIEQTPQSLKPVQKSKNPKEAQNSEDKKTELEIVALKNKIVATTNKNIEKDIEQLKHKISSAAKSMTSIPKPLKHLNPHFEELRKFFDGYQNPPNFLADIISCLAMVSSEEENLYCLKYKLQSNNDDISLWGDDYIRHLSREIIAESKKRRENIIESSKITSIAKKIVDFYFKNAAEAEAVDLLVEIGRLDILLEKSDKESAPRIASYLFQCLHYIPSEMEDFEKMAKTAFELHARCGNYSEALLIALIANDDELINKALNSCKTDIEKLQLSYMVGLTRNANGYENLSVSEKMVSAAGNEDLGNWFDLLAKELSVMEPKKMEDIYKSHLIDRSTFGKYEKTIQTSSQNLNSARENLATTFANAIVHAGFGNDTLVSPEDSDWVFKNRDRGKASAVASIGLVNMWKLEKGFQAVDRFSESVDEELKAGSLLGFSLVGCGIKSDLDASAALLADHLESES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALP0</accession>
    <name>A0ABV2ALP0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Nucleolar protein 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002238</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NRAP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000749">
        <property type="protein sequence ID" value="MES1920581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005554">
        <property type="entry name" value="NOL6/Upt22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035368">
        <property type="entry name" value="Nrap_D3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035370">
        <property type="entry name" value="Nrap_D5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17972:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17972">
        <property type="entry name" value="NUCLEOLAR RNA-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17404">
        <property type="entry name" value="Nrap_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17406">
        <property type="entry name" value="Nrap_D5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Nrap protein" evidence="2">
        <location>
            <begin position="170"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="Nrap protein" evidence="3">
        <location>
            <begin position="418"/>
            <end position="567"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU364032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="669" mass="78169" checksum="AC60F449B580F269" modified="2025-10-08" version="1">MVLAHLYYSKKIGRISSAFNVFLKLLQFMASNDLSSRDQGLILFPKDGENGRSKVDPADFLEENGIVILSPFSAFNIAATVSASKYREFITRCNDILRFIDSDRDYIARKNIIDGIFKKEPLICQFDQIVKIRFRDYFSRRILNDLINRIYERMWNRTERLSFDLDNFRKILMIGIGLNNLSHVFIEKGPSIEEKAKSRRFRDLWGKHSAVRRYKDGSIVEAVDLRKLDCGGRSIFERIIRFAVSTTKCAVKMPFENFDNLVSEHKSTSLRAKRSFRKLVSHLKSDDNFRDKIHRVDLLHPLRRVDHTYFENHIKNDVWLYEPIPVQLVFMKTKFSDGFETPFAHSENSFILLKAIYLNLVKCLKVTEKSVLRVPEGVDVWTGSAVFRISAIFQSDESEDGQLERCHSFIERHSDGLKSFEKAVAVSKLWISMHGFNLEDTFVELLVLYCYKKSKHKEMQYFSPQRAFFCFLEVLHSHEWRKLPLLIIEDSIIHSIDELKKKVKSTDQDGRFLCFHIADYAGEHFYTQKMNKYDFVRLKSISKASLDFAERFLSKDATKLNLLTLFKSEPSHFDVRFRLNSLDAIKNCSALHDIEHNSSFAFSPLKKIFDLLSNRFAAILQLSLHSKSRFLLLKWNNSSEVGHIKRYVIDEISNELKEFFQSVELGEDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALP3</accession>
    <name>A0ABV2ALP3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002258</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000758">
        <property type="protein sequence ID" value="MES1920606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="233"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="280"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="303"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="316"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="350" mass="39579" checksum="F9AFB3035BCF42CD" modified="2025-10-08" version="1">MIYFAFVTTIILLKECKSDCDTYFKYYANLRMVGCFDEFMRFSKTCHLIADKNYAIAYCESAKFTIQFKTEVTLKCTGSKVDKLVISVISTCKFPYRQHVNNLDTKLCTLLHNNSRFVDYCPLQSTNKDIFFEIGSKKILSAFSALLCNNGQLLKQNLPKIVNKSRIKGCFDHLKQPNHGKFLNGCGKNVLEGICIYICNFPFKSVQGSKEGKSICLERKIIFEPNCYFRQDLIYLAIVIGVVVLTVVVLFGVVFVLEYLGIFIFRTNIRIFNGRSNGDNGKNRNIGNNRDIGDNVDISNDENSGKNKDAGRNGKINDNGSSGDSANWSEEREDNIKSGKTKFGANKFSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM85</accession>
    <name>A0ABV2AM85_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Bromo domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002383</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000838">
        <property type="protein sequence ID" value="MES1920742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027353">
        <property type="entry name" value="NET_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45926">
        <property type="entry name" value="OSJNBA0053K19.4 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17035">
        <property type="entry name" value="BET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00503">
        <property type="entry name" value="BROMODOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bromo" evidence="4">
        <location>
            <begin position="100"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="364"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="381"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="483" mass="56359" checksum="5A2ABC0E239E2BFD" modified="2025-10-08" version="1">MKIQILKEILRFKKAQNRFLQKTKEFEGESSFAPDQKPPPVLQPDLAVAAVKNLATEQAPVRPLIQTPWAFPKAYVFKINEDSSLKPKLEPFTKIVVDLMNHIYAPAFNAPVDWVRLKLPDYPLKIKEPMDLGTIKFKLENDKYSLPEEVIRDIRLVWKNAQTYNPPANQFNRMSKVLSEMFESWLSDNELLNKDETVIVNDLSFNNNFPKKNEYDLDETDYDKVSGQVIELSVYERTELKNCISSLTNPIDLETVIKIVKTDPKYKSKDLSKKLEFDVSSLSKNVMRKLFKFINSIPNLKKIAKKDSKKIDPKYQLKQINTKLSNEFGNNREELINSVLNNKIEIKSEQIKDNTKDQYYSKLLEDSSSSTEDEDDSSDENQNLKNENEFNSQKTKVMWNWNPNAVKKAKISPTEKQKSFENGDKYKILQNGRYNNFKPPTQNFNSLNLPDQKEVARLERERQQSVNFNMQQRGFLSLQKRFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM91</accession>
    <name>A0ABV2AM91_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000661">
        <property type="protein sequence ID" value="MES1920422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19218" checksum="91BA5FE95D2D79FD" modified="2025-10-08" version="1" fragment="single">DNPQRVRRPITRPRRLPHRSRRLKAIGNNKRPAQQSGGGRPLPRALPETQRARSWRHPRKTGASHESTRANAPTRNQRLSATSALDRGQPKDVDTSSRICRCDHNSERDLFCSRKASGCGRRKTVFVHRGQIGDGSRKSVKRIEENSGRSSAQLRRGFWWIREISSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI6</accession>
    <name>A0ABV2AMI6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CCR4-NOT core subunit cdc39</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CDC39</name>
        <name evidence="3" type="ORF">MHBO_002501</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000929">
        <property type="protein sequence ID" value="MES1920884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032191">
        <property type="entry name" value="CNOT1_CAF1_bind"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024557">
        <property type="entry name" value="CNOT1_dom_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040398">
        <property type="entry name" value="Not1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13162">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13162:SF8">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16415">
        <property type="entry name" value="CNOT1_CAF1_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12842">
        <property type="entry name" value="DUF3819"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCR4-NOT transcription complex subunit 1 CAF1-binding" evidence="2">
        <location>
            <begin position="9"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="CCR4-NOT transcription complex subunit 1" evidence="1">
        <location>
            <begin position="177"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="581"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="581" mass="65595" checksum="AB27010951DA53FE" modified="2025-10-08" version="1" fragment="single">MNALTSEHRDAILLSTVVFVSRVLKSCAFSIVFSPPNPWLMGILGLLKEIYSKDDVDINVKFEIEELLKSLRLDVADIKSSFVLLLHNFGKNLKSSSEIFVPSSESSYSPMGKQIDFGADFGSNQTAYLQSYQDGRDRSYYPMRQGSDFAIHYITESIQKGTKIEDVPMSLSNPQTIRLLTHTISHAVSDNFAAVLDRCVGITSRTTMQIVGKDLEFEPNRSVFESMSLCTAESLACNLVLAICKDPLRWEVYNSLKAVLLPILKDGEEAKRIASSLAKANFGICCKAVTEVASIFVKKEVEQMIKPSIELRERYSSSGMQFPGENTAFQRSKFKTNFNEEIYPNSLPFELQPRRGGLSENQISLYNNYAPLFENHLSQTCEWAQTEANFLSMCEEDDLIEKSLLEREQPHKKAFFGIFEEDNTEHLQSDSFATAPMNSGVQQAEWPRNPEKLLFGEHFANEEVERFGLSTNRRLSFDKINTDELSNFELIKRLGSSLIKNRYDDVAKMVNEHPQVVGKRLAELKEDDKTKQAVTEFLGKAAECCASIGDSDRVILLLLADHVYNEMFKFASSLLFVDLSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ4</accession>
    <name>A0ABV2AMJ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">FAD-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002508</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UbiH/COQ6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000934">
        <property type="protein sequence ID" value="MES1920891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018168">
        <property type="entry name" value="Ubi_Hdrlase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010971">
        <property type="entry name" value="UbiH/COQ6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051205">
        <property type="entry name" value="UbiH/COQ6_monooxygenase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01988">
        <property type="entry name" value="Ubi-OHases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43876">
        <property type="entry name" value="UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43876:SF7">
        <property type="entry name" value="UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00420">
        <property type="entry name" value="RNGMNOXGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01304">
        <property type="entry name" value="UBIH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding" evidence="7">
        <location>
            <begin position="210"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding" evidence="7">
        <location>
            <begin position="366"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="414" mass="46147" checksum="DFAEC160DE2EDD45" modified="2025-10-08" version="1" fragment="single">MFAKYKKSGIKVDLKALRKLCSLKTPEANYDVVIVGGGIVGNTLASLLCFYCHSILNICIKFSKITNFAYSIKIPAKSKLTSHLKTLILEKTPNSPKNGGFDVRVYAINHFSRSVFESINAWNFFSGKTPYKKMEIYDCLLKGRLKFIAGELTYNKLDNLGHIVEDKILSNVLSNLNENKTYFLKNDEKTKYLNCEKPNFGQNPPVVKIGNKEINAKLIIGADGANSVVRKAFGFEYNKKEYGKMAVVATVKHEKNKILTCYQRFIDDGPIGILPLNEETSSVVWSTSSQHAQKLLRMADGDFIDELNRFLTVKLSKNAENQPKCISSTFWGELSQVFTNLFPGINDDKSGFPPSMISVVGKRAGFPLSKAICPSTAKKRIVLIGDSAHSIHPLAGQGLNMGIRDAFLLHREIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN45</accession>
    <name>A0ABV2AN45_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">rRNA biogenesis protein RRP36</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">RRP36</name>
        <name evidence="9" type="ORF">MHBO_002497</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Associates with 90S and pre-40S pre-ribosomal particles.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
            <location evidence="1 6">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the RRP36 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000925">
        <property type="protein sequence ID" value="MES1920879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009292">
        <property type="entry name" value="RRP36"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21738">
        <property type="entry name" value="RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21738:SF0">
        <property type="entry name" value="RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06102">
        <property type="entry name" value="RRP36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 6" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4 6" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="RGS" evidence="8">
        <location>
            <begin position="47"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="150"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="151"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="164"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="21496" checksum="5C032BB304B097AB" modified="2025-10-08" version="1">MSNEDRPREISFKKPPKKTIPRVRIKRKIDPRFKKQYGSFNETHFRDNYKFLDELEEEEIENIKSDMRHSKSREEKSRLGKKLIKLNSKLQTRKYNDALREKKSDLLKRERSLTKKGKKMFFPKQSDIKKLVMRDKFEQLKKEGNLERFINKKKKRLNAKHKRNQPEEKGNLIRKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND2</accession>
    <name>A0ABV2AND2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002734</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001118">
        <property type="protein sequence ID" value="MES1921162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="9542" checksum="E9261C0E5FF6C459" modified="2025-10-08" version="1">MAKAKNHLSKFFLFAGKESKISLRFITGESNGGKSDAFSFSCLSRTSFKAADFAQLGVLLKLWSCFGFVGGVDVASFVERFLSKLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR8</accession>
    <name>A0ABV2ANR8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002689</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001086">
        <property type="protein sequence ID" value="MES1921104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21245">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="5"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="104"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="200" mass="22863" checksum="BF8DF419744C21D8" modified="2025-10-08" version="1">MGIKYKVFIGNIPSNIDETGLSQRLEKHGKIKSLKLRKTKSANFAVVLFASRKVNKSFLTYDKTDSDIFFENKSSDIDIRKTTSEKRELDIRKCGYPQRIKKSTRICVQNIPLSATDESLVSALKVFGQIKDCRIVRDVEQKSMGFGFVEFCEKKHNFKALIAKIVLENNLLKLTKVLPICLNDEKSLTSFFCKSKILQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS9</accession>
    <name>A0ABV2ANS9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002849</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001229">
        <property type="protein sequence ID" value="MES1921303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18026">
        <property type="entry name" value="DEXHc_POLQ-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050474">
        <property type="entry name" value="Hel308_SKI2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47961">
        <property type="entry name" value="DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47961:SF6">
        <property type="entry name" value="DNA-DIRECTED DNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="5">
        <location>
            <begin position="44"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="6">
        <location>
            <begin position="254"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="396" mass="44644" checksum="AB88D10787CB3187" modified="2025-10-08" version="1" fragment="single">MKSRDDLRVDKFLSKNNFPLTLIDAYKQKGIRNFYDWQFECLAESDVLTGKNLVYSAPTSGGKTLVAEIAILKRVLSATRKIALFILPFVSIVVEKLRYFQKLLKGSGIDVVGLYSNKGLRSLSADTKIVICTIEKANVLVNRFLKEKAMSNICCVVLDELHMLGDANRGFLLELMLSKIMYWRRKIDVQVIGLSATLPNLEDISKWLDASLFVTNFRPIPLKELFCCENTVFNSKLEKIGKIDFDEQEKPKNNEIRILSKLCDESLKENKSVLVFGSSKKICENTAKWLSMIAKERPRNDLKNGLRRAEILEKLSKTQFGLDEVLNLSVPNGIAFHHSGLTVEERDVIETGFRDGTLSVLVATSTLAVGVNLPANKVIIRSMRIGLDSLDLVMYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW1</accession>
    <name>A0ABV2ANW1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DWNN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002885</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001267">
        <property type="protein sequence ID" value="MES1921350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014891">
        <property type="entry name" value="DWNN_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08783">
        <property type="entry name" value="DWNN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01180">
        <property type="entry name" value="DWNN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DWNN" evidence="2">
        <location>
            <begin position="8"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="166"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="214"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="307"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="167"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="236"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="267"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="330" mass="39063" checksum="F010EED8C841442E" modified="2025-10-08" version="1">MTLQENVVYYKFNSTNTWRHLKQAAIITLKDLENHIASYTKIGDCNHTNKELSCSCQFKLSFFDSAKKSEIKDRNMAIRANSHILVKRYPINKKNIQRIEKQMTLKNEMDAIEAEQLEHHLKVKAENKVLEEKKKENVKARLKQLEDERWEKARLAHEKEVAELKKQFSQKSSGKGENVALDRSVGTKKPIKKRTVFLKDNEPRYKKSTKVVKSLRRFSRNEKNQSKNSVNKKTSKRELNKNLNKNVDKNVNKKTSKSEKNLNKKVGNLKRKKSDSHAIERKRKNIKEFTTRTARKLKLLRKRVDKKQELESKTIHKKSRYSRYRERICN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY5</accession>
    <name>A0ABV2ANY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Eukaryotic translation initiation factor 4E</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002919</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the eukaryotic initiation factor 4E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001300">
        <property type="protein sequence ID" value="MES1921388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.760.10">
        <property type="entry name" value="RNA Cap, Translation Initiation Factor Eif4e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023398">
        <property type="entry name" value="TIF_eIF4e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001040">
        <property type="entry name" value="TIF_eIF_4E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960:SF8">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01652">
        <property type="entry name" value="IF4E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55418">
        <property type="entry name" value="eIF4e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="191" mass="22065" checksum="FF366B6F976188EF" modified="2025-10-08" version="1">MADEKNEHLLSSAWSLWYDSGKPRGKTFGSISQKEWMATLKEVCSFTSVEQFWAIFNNLLPANRMQTGSSYYLFKKGIRPEWEDKANEKGGRWHFVLTKDEKSIAGGVWLYLVLGLIGNETKGGDDIVGGAVSMREREFRVSVWVKNLISVYDQHKIGIHLKKVLKMDRKNLFFRTHESDKKRDNVNQMTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP37</accession>
    <name>A0ABV2AP37_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">5'-3' DNA helicase ZGRF1-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001349">
        <property type="protein sequence ID" value="MES1921439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018838">
        <property type="entry name" value="ZGRF1-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10382">
        <property type="entry name" value="ZGRF1-like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="5'-3' DNA helicase ZGRF1-like N-terminal" evidence="2">
        <location>
            <begin position="5"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="21087" checksum="6FA036E3EFBA4150" modified="2025-10-08" version="1">MSDLRFKCHFTKDLMRKNKRFQDGVLTFSKCPSFKGLLESAEGEKLERFFPKKSFVPQIGEIFESDRHLIEITDKIGNDENTKIETENISKNVDEKATKSGEEKSELIDKHKSSKFSIYENKKKNKIFKSEETTKETKKLKTNQQESFKKTQDANIWQKINHKTGFRSAREILETLEKAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ6</accession>
    <name>A0ABV2APJ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA polymerase II subunit 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002816</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DNA polymerase epsilon subunit B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001201">
        <property type="protein sequence ID" value="MES1921262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007185">
        <property type="entry name" value="DNA_pol_a/d/e_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016266">
        <property type="entry name" value="POLE2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12708:SF0">
        <property type="entry name" value="DNA POLYMERASE EPSILON SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12708">
        <property type="entry name" value="DNA POLYMERASE EPSILON SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04042">
        <property type="entry name" value="DNA_pol_E_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA polymerase alpha/delta/epsilon subunit B" evidence="7">
        <location>
            <begin position="112"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="40370" checksum="9A43C45C88F59C80" modified="2025-10-08" version="1" fragment="single">HQITLIENLSDKNLKETVIFGILNELEHNHCHLEDDSGFVEIDFEENVVCNILTWGSFVALKGFYDTENEIFSVQTILALNRFEDKIGTNSNLTSVISDENRNTKKYENSAVILSEIYLDCPETENRLKRLFQRFEQSAPKIFVLMGNFLYRPQKNSLKKNFEKLGKILEKFDNISAHSDFVFLPGPTDIFSKNILPRPPLGKFSTQPLSKIIKFANKSSPCKLSIDQKQVIFLRENIFSKISRNCCLPPNGPFEKKSVSQTYSELLFSQRFCAPFSHSVQRLSLNNWELMQIEENKQILFIGDQYEQFKNVIAGCGSLVVGIGQFGIDSSYAIWRLNESIDKNCVEFAKTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP7</accession>
    <name>A0ABV2APP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003181</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001588">
        <property type="protein sequence ID" value="MES1921651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="264" mass="31920" checksum="84D220727D5DF552" modified="2025-10-08" version="1">MAFSYCQLHKNFNTIRKYFKENNKKLENYFKDDDKNGPKNDNKENLKIFENKKLLFSAIKPISKLLSKILSFEYYFRSTFAEFTQKIGVEECRSFLNQNFGNEDNEIREQLLAQYKILSVDFNSENFENINFADAKNGILFHFCQNLERFQKRFESAPFSFNFMKMNKNGEKLEKNGEKMNLEKEEMAEKKDLSRRLIEFVEKNWRLPQDDIDFMIEDHIEMIEFHSEVYDCLGFLFCEIYFLSNLILQIYYFVIIDNFQFFVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ8</accession>
    <name>A0ABV2APQ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001437">
        <property type="protein sequence ID" value="MES1921519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14648" checksum="93BAAF6D26536F03" modified="2025-10-08" version="1">MRGDLDPMTLEPFEKAQQICSNAGTPVRAKPKRKVLVEISNKLTDYFEKVSSDNSVTIKMSKTETVEIKKEIKLKTRRRKRNGFQSELSLLEADKENKSAFLRAKRLSTRRNFGGINFKVELLEENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APV2</accession>
    <name>A0ABV2APV2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ApeA N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001650">
        <property type="protein sequence ID" value="MES1921705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="347" mass="40040" checksum="3516728C962659F9" modified="2025-10-08" version="1">MKNNDTVKPLEIVQNNLGTMKFVFNVEKIGVWELETLSETSKILKHPFLSDKVYVFSSETSGDKSVFSHYGHKLNSKAIKLSPSSSFGGTTLNLTLRDEFGNRIFEDRCNKLRMEPNDFINFKTNSIKSGNHSLVCGIFLSGTVSKKHKIQLYTTDIEGNILRFSPFFVYIEAGDLHPEKVSMDLEEHEMAYVDIYLDPRDRYGNKYKKLMSKKISIEETCDASNFTEKTPILNFREVGGYKVRHFLQFPAISCRVRLINLIIADKENGEDIVSKRWQLGKENFAKAYFYRTFIEASLKEELLLVRKSIVLETEIDEETLVEFFIFKKDELSHRKSIAESLGVDWSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ7</accession>
    <name>A0ABV2APZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003066</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001465">
        <property type="protein sequence ID" value="MES1921539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="71"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="13365" checksum="3A4D4ADFAF4CD0AF" modified="2025-10-08" version="1">MHGFTFVTKDGYHIKLIRKPITSFEAMRRRERAIEVYPVKMLETLRRLENIKPKLKKYFEEKEKNERISEEHGGEQKRKQLEKQLEILQKRRLVVLTEIKRTVQSKKSKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ49</accession>
    <name>A0ABV2AQ49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003113</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001506">
        <property type="protein sequence ID" value="MES1921581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13894">
        <property type="entry name" value="zf-C2H2_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="58"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="13568" checksum="DAAECFA30D86C6CE" modified="2025-10-08" version="1">MIKFEYSFSFINKKPLSALLRFYYANCNYSFIKLLRKVFSRNDRNQIFQAERDKLRKFSCPKCDKRFFKKQTMNSHLNSVHYKIRCFQCFLCFKRFSKKYNLKRHQLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ52</accession>
    <name>A0ABV2AQ52_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">Glycylpeptide N-tetradecanoyltransferase</fullName>
            <ecNumber evidence="2 5">2.3.1.97</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">NMT1</name>
        <name evidence="9" type="ORF">MHBO_003197</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>N-terminal glycyl-[protein] + tetradecanoyl-CoA = N-tetradecanoylglycyl-[protein] + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15521"/>
            <dbReference type="Rhea" id="RHEA-COMP:12666"/>
            <dbReference type="Rhea" id="RHEA-COMP:12667"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57385"/>
            <dbReference type="ChEBI" id="CHEBI:64723"/>
            <dbReference type="ChEBI" id="CHEBI:133050"/>
            <dbReference type="EC" id="2.3.1.97"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the NMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.97" evidence="2 5"/>
    <dbReference type="EMBL" id="JBDODL010001611">
        <property type="protein sequence ID" value="MES1921669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004379">
        <property type="term" value="F:glycylpeptide N-tetradecanoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000903">
        <property type="entry name" value="NMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022677">
        <property type="entry name" value="NMT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022678">
        <property type="entry name" value="NMT_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022676">
        <property type="entry name" value="NMT_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11377:SF5">
        <property type="entry name" value="GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11377">
        <property type="entry name" value="N-MYRISTOYL TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01233">
        <property type="entry name" value="NMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02799">
        <property type="entry name" value="NMT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00975">
        <property type="entry name" value="NMT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycylpeptide N-tetradecanoyltransferase N-terminal" evidence="7">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="Glycylpeptide N-tetradecanoyltransferase C-terminal" evidence="8">
        <location>
            <begin position="67"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17553" checksum="A86CC55C2C21B4A5" modified="2025-10-08" version="1" fragment="single">MVEINFLCVHKKLRSKRLAPVLIKEITRRVHLKGIWQAIYTAGIEVTKPFCKNLYYHRQLNPRKLVEIQFAYKNPKLKMELFEKLHRLPAKTSISLEPLKEEDSESAMKLLNDYLQKFKMRFYFSEKEFSHFFVPRENVVSTYVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ97</accession>
    <name>A0ABV2AQ97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA independent RNA polymerase I transcription factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RRN3</name>
        <name evidence="3" type="ORF">MHBO_003393</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RRN3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001862">
        <property type="protein sequence ID" value="MES1921857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007991">
        <property type="entry name" value="RNA_pol_I_trans_ini_fac_RRN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12790:SF0">
        <property type="entry name" value="RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12790">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IA RRN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05327">
        <property type="entry name" value="RRN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="265"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="267"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="287" mass="33958" checksum="20582C580F93DC2F" modified="2025-10-08" version="1" fragment="single">SHSRNIFCHKKSTLFYYKNLKLNFSQFVVFIVTNFHTDYPEKFIRLLIDRIVDKNKTTTTRKNSALYLASYIVRAKFLKPTIIFKSLNVLVELALFYSENTKFCNLPIFYSICESIFHIFIYRHNLLSESGEIEKMSKDLLKIISNEPKILRHCSRNIVIAFSVFSTATNLFDCFSVLLCQFRYFCRNKSNSFRFSDQLKKAGLNQENGPRDFICQNETYFPFDLNKQTFEAKDLKFLFKFEEFYSDDKNLQSDLICVLDQQMNENEGSDDENEAMEESDVMEIHFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI6</accession>
    <name>A0ABV2AQI6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Copper transport protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003427</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001911">
        <property type="protein sequence ID" value="MES1921897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007274">
        <property type="entry name" value="Cop_transporter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04145">
        <property type="entry name" value="Ctr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0186">Copper</keyword>
    <keyword evidence="4" id="KW-0187">Copper transport</keyword>
    <keyword evidence="4" id="KW-0406">Ion transport</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU367022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7782" checksum="4B02F4A547A0A345" modified="2025-10-08" version="1">MKNGGMQMTFNADVNVTILFKVWKTKNWWQLLLSALIIIILGLVKEAISFFRKEKIRKKLVFILKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQR6</accession>
    <name>A0ABV2AQR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Luc7-like protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">LUC7L3</name>
        <name evidence="2" type="ORF">MHBO_003535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Luc7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002082">
        <property type="protein sequence ID" value="MES1922015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004882">
        <property type="entry name" value="Luc7-rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12375">
        <property type="entry name" value="RNA-BINDING PROTEIN LUC7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03194">
        <property type="entry name" value="LUC7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13210" checksum="4CA8E6C748FE85D8" modified="2025-10-08" version="1">MEAQRALLDQLMGADRNLAPEDGKKMRHRWKKRGVCPYFICGFCPYELFVNTKAAIGNCHLAHDYTMQKAFSDEPIEAKKSYLKRFCKFLTSVMDELDERYFCFKRRKKSVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU9</accession>
    <name>A0ABV2AQU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DNA-directed RNA polymerases I, II, and III subunit RPABC2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPII18</name>
        <name evidence="6" type="ORF">MHBO_003570</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the archaeal Rpo6/eukaryotic RPB6 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002149">
        <property type="protein sequence ID" value="MES1922052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020708">
        <property type="entry name" value="DNA-dir_RNA_polK_14-18kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006110">
        <property type="entry name" value="Pol_omega/Rpo6/RPB6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028363">
        <property type="entry name" value="RPB6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036161">
        <property type="entry name" value="RPB6/omega-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006111">
        <property type="entry name" value="Rpo6/Rpb6"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF002208">
        <property type="entry name" value="PRK01099.1-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47227">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE SUBUNIT K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47227:SF5">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01192">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500154">
        <property type="entry name" value="RPB6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000778">
        <property type="entry name" value="RpoK/RPB6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01409">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63562">
        <property type="entry name" value="RPB6/omega subunit-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01111">
        <property type="entry name" value="RNA_POL_K_14KD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12107" checksum="45AC8503BBD875C0" modified="2025-10-08" version="1">MDSENFEKIEILEKSLTKTPFNFKEKITTQYMTKYERARVLGTRALQISMGAPIMVAVMGETDLLEIAAKELREKKIPIVIRRFLPDGSHEDWDIDELIVDHRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR15</accession>
    <name>A0ABV2AR15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003440</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001927">
        <property type="protein sequence ID" value="MES1921911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051350">
        <property type="entry name" value="WD_repeat-ST_regulator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22838">
        <property type="entry name" value="WD REPEAT PROTEIN 26-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22838:SF0">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="245"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="281" mass="31530" checksum="B6EDEA7432D1D176" modified="2025-10-08" version="1">MTSGIFKRRLLSHPYILSVSVTWNEEGASNPFPSRDDDQSLQLLLPHPPNKPLPFPPQTKPLANDPEKLNLRIAFCDSLGRLYFSFHPFLRFALVADFGRLLGHFHLTPEGCLRVHVGSQIKRYDVSGITSALLEESHAFSKLPCGERAAAEKEERALGRDEELEMPRMWHFKEDGDPFAVFNALGPKLDFYRKRGRVRLLQRFSGAKQESHRLRSCEVGGLMICGSEDSLIYVWGGAETAEMTIEGHSAVVNSIFGSPSDKSVFASASDDGTVRLWRILM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR27</accession>
    <name>A0ABV2AR27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">S1 motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003351</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RRP4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001808">
        <property type="protein sequence ID" value="MES1921817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05789">
        <property type="entry name" value="S1_Rrp4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026699">
        <property type="entry name" value="Exosome_RNA_bind1/RRP40/RRP4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048565">
        <property type="entry name" value="S1_RRP4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21321:SF4">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT RRP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21321">
        <property type="entry name" value="PNAS-3 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15985">
        <property type="entry name" value="KH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21266">
        <property type="entry name" value="S1_RRP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110324">
        <property type="entry name" value="Ribosomal L27 protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0271">Exosome</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="S1 motif" evidence="5">
        <location>
            <begin position="56"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="29024" checksum="7CB321846FF46E4D" modified="2025-10-08" version="1" fragment="single">YTQPGEQTVHEEGFIRGHGTSLVNGKLISNISGYIERTNKLVSVRPINSRYIGNVGDVIVGRVLEVNDRGWKIDINGKFNATLLVNSLFVPGSFQDRKTVIDESQIRNIFKEGDLISAEIQKMHQNDSINLQTRSVKYGMLKNGCLVTVPHVQIRKMKSQFINPFDQINIVVGLNGRIWISISDPENGEERSKERFAELFEKVVRLKNCMEVLKTSSMAIFDKSITKVYEKSKQLNLSLNDILNDTNLKNLTDIQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR49</accession>
    <name>A0ABV2AR49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003660</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002276">
        <property type="protein sequence ID" value="MES1922145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="91"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="193"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="200"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="218" mass="25013" checksum="A6418C8EEC66734C" modified="2025-10-08" version="1">MPHKNSINFFANLLLGLNILAWSFFIAYFQELAVVAPYTNNGVLISANVGLYKQDNFEINFNVTQKIDFFEKPELICYTEHCSDNLQTFQIVLYVGFGIIILLGVLNLYLVVANFMSIFNVKISNILNFIIYALAIVLGICVPIYLKFFWRKYYPFPKNTMEFGIFFYIPISFAPIEVVSLLVYLFAIKNDGESEKSETKQQSSYYSSDYSPSSADND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARE5</accession>
    <name>A0ABV2ARE5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Isoprenylcysteine carboxylmethyltransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003752</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002458">
        <property type="protein sequence ID" value="MES1922245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1630">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="70" mass="8343" checksum="4E278433E9D2B2E8" modified="2025-10-08" version="1">MNWAIVYCFTVSTKMINWSIIGFVTYTILFQFSTRLTEEITSSKYEEYEDYRNSTNMFLPTFGKIKSKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF7</accession>
    <name>A0ABV2ARF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002484">
        <property type="protein sequence ID" value="MES1922262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8304" checksum="96A299A5F831408D" modified="2025-10-08" version="1">MGLFFFGNRLMDFFANLMILLLLRVFKIETVISMTSILFFSSFSILAVIVFKGVENSPEDSVEVSQSEIDLSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG1</accession>
    <name>A0ABV2ARG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003774</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002492">
        <property type="protein sequence ID" value="MES1922266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12933" checksum="2AFEAD707B09F1AE" modified="2025-10-08" version="1">MLVSIVLKGRKAIWHSEESEVFAANSLEQLEDEFEVLEDSRDDFKNIVSANWRYWWQPCLSEKCFVNGKYVTRGAKAINKRTGGVMENYEVLPLICGVYGGKDDICQVTTSYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG3</accession>
    <name>A0ABV2ARG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">U4/U6.U5 tri-snRNP-associated protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">USP39</name>
        <name evidence="2" type="ORF">MHBO_003764</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002475">
        <property type="protein sequence ID" value="MES1922258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8159" checksum="4C6143BF9E499994" modified="2025-10-08" version="1" fragment="single">AEKLKSKRYDLICNIVHDGEDSKNGVKRAYVLHKANNKWYETHDLNINESIAQLVSVAESYIQIWELKDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK2</accession>
    <name>A0ABV2ARK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002500">
        <property type="protein sequence ID" value="MES1922272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028598">
        <property type="entry name" value="BOP1/Erb1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17605:SF0">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BOP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17605">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="75" mass="8707" checksum="39DFE74607CE60FA" modified="2025-10-08" version="1">MVSVDGATKKQVIRAESDSSETEGALARIGEVPLEWYKNFNHIGYNVRGKKVERRIEKLDIKKQLKMAKHNKFYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN7</accession>
    <name>A0ABV2ARN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">TFIIS central domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003824</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002575">
        <property type="protein sequence ID" value="MES1922317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.30">
        <property type="entry name" value="Transcription elongation factor S-II, central domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003618">
        <property type="entry name" value="TFIIS_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036575">
        <property type="entry name" value="TFIIS_cen_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11477:SF0">
        <property type="entry name" value="IP08861P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11477">
        <property type="entry name" value="TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07500">
        <property type="entry name" value="TFIIS_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00510">
        <property type="entry name" value="TFS2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46942">
        <property type="entry name" value="Elongation factor TFIIS domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51321">
        <property type="entry name" value="TFIIS_CENTRAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIS central" evidence="5">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="27251" checksum="0E1D834B8F490867" modified="2025-10-08" version="1" fragment="single">IKKNVNEIEKIGRYRKRTKEHFVNILGTEKGEKVENEIYKNFGGKNMKKYTTKSRELIFNLRKNENLVENVQNGNIPIVKLISMTHLEMASPEQNQWREKVQKEMLKEKVRDKTITETYKKNLKMQNKIPLENDFAANEKQPKIVQEFEIDENADQSLNEQKMEIKPKRRAVLTENKLLETKRYFESDLYSEKSNFLYSEKSIWNGFVDSYHKPRTVSLKEFKVSFYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR3</accession>
    <name>A0ABV2ARR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003687</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002333">
        <property type="protein sequence ID" value="MES1922169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="230"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="276" mass="31924" checksum="D3F58CF76828DF4B" modified="2025-10-08" version="1">MAYNLFQDKTAIKFQFSNALLIYKSEHVMEMISNNKEFSSDSIGMFSSKTNGQYVDICNCHHFEAGADKTGTDEHFSKRIKNLTFSKKESISGLYYVRRDKILPSTPRILSDLKTIKQFCDDPIIVTVEVDVDRYHISVSAYQFCTLPSKSDVSDNKIMAIKLVPIATRNAHNEGELYKFGRLESILTRNKKTDRKVMFREIKEAWIDVSKAQQRIKKIENFIDSKGNELKEGDEKYSEIRDEMAELSSKQEEYSNSIKSLRSLFQLYRNVVNAEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR8</accession>
    <name>A0ABV2ARR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002631">
        <property type="protein sequence ID" value="MES1922347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14637" checksum="478C0F77DBE5744D" modified="2025-10-08" version="1" fragment="single">DDPTFSKTFGEHTIELDGKKIVGINIFKGHKNTIELSAFKAVNIYHLLKTFGIDKNKLNLENEFWEKAKIKYEEPKNYYSEKMEKIIQDGILTKKVNFLNLATIFWLRDKNFCFVGNCVVAGKIDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS21</accession>
    <name>A0ABV2AS21_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Growth hormone-inducible transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003852</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002621">
        <property type="protein sequence ID" value="MES1922344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006214">
        <property type="entry name" value="Bax_inhibitor_1-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01027">
        <property type="entry name" value="Bax1-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="115"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="208" mass="22075" checksum="677126369154B121" modified="2025-10-08" version="1" fragment="single">MFRKLFSRKNISPSILQSLKAAQKRRASFLNKTETLSKGEKIFYTGMGTAATFGILSVVSNGLSSSSAHLGAFSNETRRRLQSGYGHVIGGIALTASSAFYLFRNGFAAKMARVNPLMLFGVSFLAVIGTSIATQMTDYHKNPSLKYAFWSLFNISIAATLCPMGVFGGEILFKSAIATAAIVTSMSAIAASAPSDAFLNWGTGLGIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS65</accession>
    <name>A0ABV2AS65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Histone chaperone asf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ASF1</name>
        <name evidence="7" type="ORF">MHBO_004036</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ASF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003011">
        <property type="protein sequence ID" value="MES1922518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1490">
        <property type="entry name" value="Histone chaperone ASF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006818">
        <property type="entry name" value="ASF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036747">
        <property type="entry name" value="ASF1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12040">
        <property type="entry name" value="ANTI-SILENCING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12040:SF0">
        <property type="entry name" value="HISTONE CHAPERONE ASF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04729">
        <property type="entry name" value="ASF1_hist_chap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101546">
        <property type="entry name" value="ASF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="22918" checksum="905818AB8493632E" modified="2025-10-08" version="1" fragment="single">YNIKANFAMIDLKKITLVNENQIKYRDPFLLHLELHCYEPGLPPNSTIIFDISFVSPSNEKEFEQKLGKFEIGSIRTGFNTFDLKVEGPDHSIVPEVDRFDISALIISCSYLDQEFVRVGYFVSFYVAEEMKEQIETMEKISVEDVRRKILENDVRVTRFSIDWNKSKLANSEKLDNAKSFDGKLGENSNLVNNMEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG9</accession>
    <name>A0ABV2ASG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003259">
        <property type="protein sequence ID" value="MES1922623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="223"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="256"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="26711" checksum="B4D4A0BF5908F55F" modified="2025-10-08" version="1">MIGLATGPAYAASGVAPETTFGKVLGTGTQLATGLMGGPFGAAIGALGATPFASAVEDALGLRAAEEEKDVIESATGFFGGRQKVADKLSGTKDVAGTYAGAKSFAEAANKAIDKLGSSAAGTGLTSDERRAYSKQSLKDIGAYQDLAELAESLRGVGSISDTRRDYSFPSSPIAGKTYGTGYGPVSYGTSLTYGGATPMSPRNALDARAMSAYGAAMAHERGQRARSSWGGRGAAGTDASGKSRGMGSESEAKGSRGGFGGTGIGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU9</accession>
    <name>A0ABV2ASU9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004026</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002990">
        <property type="protein sequence ID" value="MES1922511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="160"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="244"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="250"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="272" mass="32234" checksum="4733FA7A3B99ED56" modified="2025-10-08" version="1">MYLSGVKKIDYKLFLEVFDHFHHIPSLAKRSPSYRRYSNSLLLYLSDFYSRRYPLHPTSAILKDIRTEFEDRWRKGDVPGWQKPWPLEVFHQLPAKCSLPLDMRADEKWKIDREDKLKPDGDEKAKVNGIVKNDKERLSVFCESCKKRFKKTVWRSHISGRKHKKNVQRKLREKDTNKKNSNSEADGDPTKTNSNKNVLEGKEKETAYVEFAVRVLKTLLSEVFEGTCSYIEKKLTRSYEEVRKELEEREKEEEEDVEKQDEEDLYSGGSKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW5</accession>
    <name>A0ABV2ASW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MutS-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">MSH2</name>
        <name evidence="1" type="ORF">MHBO_004265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003556">
        <property type="protein sequence ID" value="MES1922742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8786" checksum="CA433ACABB04F7F8" modified="2025-10-08" version="1">MIEKVIDLESVKNHDYRINPKFTESIFNMATEINNLKEEMENEKLIILKKSNLKIKIDKVFPFGFHFVSPKNVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX7</accession>
    <name>A0ABV2ASX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003649">
        <property type="protein sequence ID" value="MES1922771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16938" checksum="692D54E6A31C147F" modified="2025-10-08" version="1" fragment="single">TKIKSISCGAHTVYAISLENILFSSGLDNFGQLGRKNKNFDRKKSFSRCLQKVLSAKTPNLPQKRKPDNTFFANAKKVCGGTHHCIVLTTKVPNLNCVKRINCIRSEETLLVCSASKQIRKKRNLKMSNQKQSLHLFLFRLKKKEKTSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX8</accession>
    <name>A0ABV2ASX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DIX domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004298</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003662">
        <property type="protein sequence ID" value="MES1922774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="180" mass="21111" checksum="957E77E206AD8905" modified="2025-10-08" version="1">MTKKQILRVKRNIECENPLSVIVVKKRKREKESNNNLDNNGVVFRLLSSTKNSGNILPTVQKRKYFQPLKRPNSQKCSKSDSILVETNRKKLKGFHFEVFPKRKKKQAKNGIANKMGFFTIDSPEKRKNENFWCDIYVQDKNKEFDGYLEERKDTNGNSIFRKNRVINLEQIGDVVLMSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT24</accession>
    <name>A0ABV2AT24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">SUMO protein smt3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SMT3</name>
        <name evidence="3" type="ORF">MHBO_004345</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003811">
        <property type="protein sequence ID" value="MES1922819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16116">
        <property type="entry name" value="Ubl_Smt3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022617">
        <property type="entry name" value="Rad60/SUMO-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10562">
        <property type="entry name" value="SMALL UBIQUITIN-RELATED MODIFIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11976">
        <property type="entry name" value="Rad60-SLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="2">
        <location>
            <begin position="52"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="13"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="42"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="14597" checksum="F84DCDC13DFCC08B" modified="2025-10-08" version="1">MENEENKNGEQQPAPEIATETAPETPATESEGKTETTATETGEQKEEKKSTEHINIKVRSQDNNEVFFKVRKSTPMNKVMEAYCSRVGKPVGSVRFLFEGERLMKNSNAEKIGLEEGDTIDAMVEQTGGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT3</accession>
    <name>A0ABV2ATT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004608</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004544">
        <property type="protein sequence ID" value="MES1923071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="51"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="86"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="106"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="136"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="26537" checksum="7D266DB534BA9A92" modified="2025-10-08" version="1" fragment="single">KEGDNRGPGRANTYRDYRQNNDAPIPDYSFYQRKNYHSDHSSRADYRRNQSSNPYDSHSYSSHSYANRPSNYNSDYRSQRQPARYSGRDDYRRSRDSAPGYGPVDSKNRFEDKIDRYRSPPLYGQNYSAHRRNYEDYSSNNNRHLQDSYRSSNNRYHQGNFRGSDTSRNNEDGYSSRYSGDKRYQKDFERGMYQRRKNYENPVKEYSSRREGDFNHYKSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW3</accession>
    <name>A0ABV2ATW3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004626</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004598">
        <property type="protein sequence ID" value="MES1923087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17039">
        <property type="entry name" value="Ubl_ubiquitin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10621">
        <property type="entry name" value="UV EXCISION REPAIR PROTEIN RAD23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10621:SF0">
        <property type="entry name" value="UV EXCISION REPAIR PROTEIN RAD23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16289" checksum="9AB37EF295F9DEE7" modified="2025-10-08" version="1" fragment="single">MKLSIQLPRHRASNNGSDFEISAEPEMFVADLKAIIQAELGIPLSSQTLIYKNVKLQDNKPLSTYSLPENCAITLEDNCLDKNSNFSTKKQNFVENNIGKEKSASQLENKLEAKPEREISINEKSLKETVGNVSRDYFDKLMHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX4</accession>
    <name>A0ABV2ATX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004662</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004747">
        <property type="protein sequence ID" value="MES1923120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="7084" checksum="46883E44FEC13700" modified="2025-10-08" version="1" fragment="single">RYKNKLFSPILDLPFRDTDLVIKAQITRVSGRYKHLLLRIPDKLCQPAIPILHLPFRDTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX6</accession>
    <name>A0ABV2ATX6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004123">
        <property type="protein sequence ID" value="MES1922949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="105"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="25083" checksum="84E13BB600E8FCA0" modified="2025-10-08" version="1">MLGELCSEYTYWSARQELTEDGYFYSTRENIEEKTGLSSYQQREALKKLTESGIIETQKRGTPCKTFYCINESNLAIMLYDKKLKNLTSSSQKISHQEVEKFNANNNITNNSNNNSNKKESVNKTRFTPPSVSEVTDYCKERNNGIDANRFVDYYEARGWELGKGRKMKSWKACVRTWEQNGKENNGKPKRDVEDDARFRNLPAVKRFTDLQKGCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU10</accession>
    <name>A0ABV2AU10_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cyclin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004411</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003957">
        <property type="protein sequence ID" value="MES1922883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043198">
        <property type="entry name" value="Cyclin/Ssn8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10026">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="180" mass="21162" checksum="A9840E69FCCBB77E" modified="2025-10-08" version="1" fragment="single">MAENKEKINKNLLEIDDKDHSISSLSENLRFLGHVSSVNLLRIAGKLLKIPQPAIAKSTILFYKCLKRSPKNKTLKQNEMFLAMACCFLGTKSEESLRQYRDILMVFDRIFNKSLNRDAKVFEFDETTRFLRWKKILFTSEFEALDLLGHILNYEHPYKFLLSYLNALHLDDMPPQFLQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU95</accession>
    <name>A0ABV2AU95_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cyclin C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004323">
        <property type="protein sequence ID" value="MES1923006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="98"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="124"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="148"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="173"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="223" mass="26277" checksum="1EFBFDD0556ED953" modified="2025-10-08" version="1" fragment="single">PVWNYLNDSLFTSECIDFDPETLACSAIYLAALEFGIPLPEKPLCWHEFFDVRYETIKSCCDSILGCYRVDEAALDFSGDFERELKIFRAQQEEQTETESKMGRENSKRVREKDQNQRTRKVGRRAEKMAGSRYSESSHSRRSESAERRRRPSKRHDGRRRYKKRRSRASHRRQSDFDRKSGKSKNGLEIKAKTKSIKKDDEKSPKAIKFYTKRAQRLKSEMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI1</accession>
    <name>A0ABV2AUI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004875</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005612">
        <property type="protein sequence ID" value="MES1923320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="122"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17383" checksum="AD928C925B70D463" modified="2025-10-08" version="1">MTDKDRIIAGKVNIINKLEIVKYVLIVLLSIFGFGYIPVLYYLIKNRGLKCCESNDDPFAKRKDKTECPKKDKNPQADLGENVKVITNPVENPEESNNEIETQNMKDENDASSNNIQQGDNSEGKVYTKSDRTQQKDIDVEACTNLIDTYDNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV48</accession>
    <name>A0ABV2AV48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004818</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005397">
        <property type="protein sequence ID" value="MES1923272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14643" checksum="D4FFA0A99954C0D0" modified="2025-10-08" version="1">MFSGTDRRKGRFPIKENAFSGIRHRFRVVKVDRRQFGLSQRKRGKPGQQSSHFQDDPLHKTAGAERRNGAAFLRTQRKMERLPEILCAVPGNLREKDWGRQYRLFDEQQKERLRKRVFWINF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV54</accession>
    <name>A0ABV2AV54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005124</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006713">
        <property type="protein sequence ID" value="MES1923536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="8094" checksum="81673E3557D45731" modified="2025-10-08" version="1" fragment="single">ENTKVLQEARSSEKYTINEVDRHGLQPQDELDAEDEVTGEIVTENDEEVKWLMGHDFQKTVVEMKEKHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG6</accession>
    <name>A0ABV2AVG6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Chromatin-remodeling ATPase INO80</fullName>
            <ecNumber evidence="5">3.6.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">INO80_4</name>
        <name evidence="7" type="ORF">MHBO_005263</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Component of the INO80 chromatin-remodeling complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">The DBINO region is involved in binding to DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the SNF2/RAD54 helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010007413">
        <property type="protein sequence ID" value="MES1923646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050520">
        <property type="entry name" value="INO80/SWR1_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685:SF2">
        <property type="entry name" value="CHROMATIN-REMODELING ATPASE INO80"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685">
        <property type="entry name" value="HELICASE SRCAP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0347">Helicase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SNF2 N-terminal" evidence="6">
        <location>
            <begin position="3"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU368001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10459" checksum="374ECB142ADE1964" modified="2025-10-08" version="1" fragment="single">SQRWKSLLSIECRNRLLLTGTPIQNSMAELWSLLHYIMPSIFQKHHDFKEWFSRNIEDHAEGKSQKLNSAQLKRLHMILKPFMLRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVQ1</accession>
    <name>A0ABV2AVQ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005063</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006423">
        <property type="protein sequence ID" value="MES1923486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50003">
        <property type="entry name" value="PH_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PH" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="7923" checksum="CA5622FABB5A3A62" modified="2025-10-08" version="1">MKEVEGVESGKTSKALKKAKSAVEENCFTVIAAGGQENSFQLENKGDREIWVNGLRLVLSTVANRRPADMVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE89</accession>
    <name>A0ABV2AE89_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000037</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="8">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 8" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="16"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="292" mass="33408" checksum="826AA7C4F397A7CB" modified="2025-10-08" version="1">MDKHRKLNSDLSLKDFKIEKKIGKGYFSEVTGLKCAIKAVKKDPNKTTYRRLLNERNILKTVNTPYIPELLGAFQDDSRAFIVMNFFEKGDLKSLSKKERLTENGLKPLVLQVVKAIAALHSYNIVHGDIKPDNILISANRRAVLSDFGLAEISTKGFKENTIALMYTAPEVLKNKKCFASDWWSFGVTLFELVTGSLPFRLYVDKKNEVSFSEKCKLNFRILTQTIVSFPSEMSESLKNLIENLLQVDPCKRLRSKEIIEHEFFKPSVQSKMNKHLNFGKIIYSTEKLSSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEE4</accession>
    <name>A0ABV2AEE4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Dynamin-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000085</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08771">
        <property type="entry name" value="DLP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1240">
        <property type="entry name" value="Dynamin, middle domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022812">
        <property type="entry name" value="Dynamin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001401">
        <property type="entry name" value="Dynamin_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045063">
        <property type="entry name" value="Dynamin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000375">
        <property type="entry name" value="Dynamin_stalk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030381">
        <property type="entry name" value="G_DYNAMIN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11566">
        <property type="entry name" value="DYNAMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11566:SF21">
        <property type="entry name" value="DYNAMIN RELATED PROTEIN 1, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01031">
        <property type="entry name" value="Dynamin_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00350">
        <property type="entry name" value="Dynamin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00195">
        <property type="entry name" value="DYNAMIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00053">
        <property type="entry name" value="DYNc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51718">
        <property type="entry name" value="G_DYNAMIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dynamin-type G" evidence="3">
        <location>
            <begin position="30"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="480" mass="53057" checksum="5E255C1BB0613B77" modified="2025-10-08" version="1">MWDVSNCIHLVPVTNKLQDIFSTLHSSPLLLDLPQIVVVGNQSSGKSSVLESFVGRDFLPRNKGICTRRPLILQLVSSKEAVREYGVFLHQEEKRYSDFSKIREEIINLTEKEAGKGKGVNERPIVLKVFSEKFIDLTLVDLPGITKVAVGDQPTDIEEKIRGIVKSYAEKPNTLILAVIPANVDIATSDALKIAKELDPHSKRTVGVLTKVDLMDKGESVRDILGGKVFPLRHGYVAVRNRSQSEIALNVSVAEGLERERRFFADNALYSALAEHTGSARLAERLSRILVAHIRAFLPGLRLHVRRMSAEVEKRLRKFGADPSDGKGAKPATLLAAISKYANKFNDAIEGKEKDAIAKKELYGGARISKIFHQDFAAQVLRIDPFDQLRNEEISTAIRNAKVVTSTSGHQAVSLCARAVLRDPLEKPDRAPEGARAALRRNGLQRAPESVPELLRGGAAALLETEGENCRLRRRRAQGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEK0</accession>
    <name>A0ABV2AEK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000152</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="391" mass="44728" checksum="7A18ADA4C87CE4B0" modified="2025-10-08" version="1">MPKTLMDIQDLLPDVIRAMNDLQTEFTYENMVNLLNKLEKIPDIHLLHQRDILATLRCFTDLLAGDITVEKLEKTLYISDEDLKRALDRLISCINVGTSEAILVKALKSAIYLLKYSILSLLQSDKIIIKIKFGIIPGCPKTIVKCKLRELKKYAQKLPGTCTFELILLLLKQVDSPPVCKTAKEELVTVVESLRDVYPFDKDDGFTKKKLEYAKNHVSDSSIQDSLKDLLDKKFPASAGIAVTSSIWHFLEKSICQLFDSSPVYLKRGIVDNLIDVVVVDTTAFLDKVVRMTKELSNFGYELSSIVERFQLLVSANNNNNLNFILDVLALDYHKRQMKEKKSTKIDYYKDTRYFKRVHSELDGKAFEPLITTAIIIVEKIRIRGAFIMFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEQ3</accession>
    <name>A0ABV2AEQ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Transmembrane 9 superfamily member</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000173</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000022">
        <property type="protein sequence ID" value="MES1918162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004240">
        <property type="entry name" value="EMP70"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10766">
        <property type="entry name" value="TRANSMEMBRANE 9 SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02990">
        <property type="entry name" value="EMP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="230"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="294"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="329"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="363"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="399"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="452"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="485"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="518"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="554"/>
            <end position="583"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="593" mass="68542" checksum="5F59D3FD3BAFF7A4" modified="2025-10-08" version="1">MAYFLPGVAPRLYDPNEEIPLKTLKLTSHHTQMPYDFYYLKFCRPGTILRVSESLGELLNGDIIQNTPYSIKKSEQKKCQTVCRTSLNKEDTQKFAYMIDNDYRVQWLLDNLAAVETFENGQKRYKKGFQIGYKFHDKYYLNNHVDITIRYHPKKSSKEEKFTIVGFEVKPESHSNDKNCTFDQNKKFSFEHNKPTNITFTYSVHFEKSETEWSARWEPYAQIPNQNIHLFSFINSIIPVITLMVVVAYILMRTLKKDFFAYNVLAEDPESRLEEKGWKLVHGDVFRPPKHSTALSIAIGSGFQIGAMLLLMIFLLVTKVVTPIKRGSIVNAFLFLFLLMTYFSGLFSSMMNKMFGKSNYKLIAFYSSLLYPGINFSVFLILEFILWSQGSSGAVSFFVLFKLFFLWICISVPLSIYGAYRGNLATKIKTVTKVNLIPRQIPKNANKISRTVKILCAGILPFLAAFVEIYYLMNSIWLDRFYFMVGGFILIFSILTIISCEITIILCYLQLCKEDYNWWWNAFLSSGSSGICLFFYGIYYGIFNLHISHFAPFVLYIGYMSLISFTLFLLTGTIGVVAAFLFISKIYSSIKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER0</accession>
    <name>A0ABV2AER0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000186</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000024">
        <property type="protein sequence ID" value="MES1918175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11625" checksum="769C4F4B7C5A0373" modified="2025-10-08" version="1">MIDNENAECIEFLDFEKILKFSQKIKNKSANFTEFDKINIEEKKKFNLDFFVVEQKLYELLGIVSFTTSDFNLYKHVLPQKIFTVDEEFTPRLQVFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEV1</accession>
    <name>A0ABV2AEV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000231</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039997">
        <property type="entry name" value="TFE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13097:SF7">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13097">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="15582" checksum="08F99B855D5C1FED" modified="2025-10-08" version="1">MGNLSASKVREALVFPVSHCLVTTTSLKSSQSQSFKTSNFFYRLDPIQFLTAVKFRIMKIQLELDQKVTENTFFCGNKDCEEKDAKIDVMQLLSGKINKKGEFVCESCDQVLVSSAKTSESSNRDLLKKFNLQIEPVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF32</accession>
    <name>A0ABV2AF32_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000287</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="443" mass="51406" checksum="4224FCCE949D6337" modified="2025-10-08" version="1">MSPFRESSRNEIDQQPQSYSKSQNSDIELIFEELGIGKYLPMFLNEEMEPEDMLLLSPEEQIAFIPKMGPRMRLIDYLCRNSPNDPRVANYKQKRQSANPNRSQKFNAKKFLVGNEVEKCQNVKSQNFLKNTKIAKSEKDNLPNFESLLNPRDFNSRQHNNELISNSIRKDFVYRRNVGSKNQNENCSNPKSSFSFLGQNLLQIESNLIEDFDDLQAPATAISSSRLLDFGGSDILRNESSLGDNGIEESQKNANGQENSVLRNSDIVDEFELTNREKTKSDFGENPNLELKIYEAEYKKPEFGDEMEKKIVGIYYSQKNLVKQKFRAKALFYGKVCFYRKKERYGFGTLNPENDRIFIHNSALISDPTELEEGSEIVFNLCPRLGKVPSFKGNFVFEDEMDEFLEFLKSEREFEKRNMQKTISRLMAVNVRVVSENKNRKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB0</accession>
    <name>A0ABV2AFB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000159</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000020">
        <property type="protein sequence ID" value="MES1918149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20372" checksum="6BB69CE8BD3FAFC5" modified="2025-10-08" version="1">MENDLTINIQINRSSLNLVRKMCTEINYVNNGNTDFLRANLYSSAKKIRLIDFEQRNNGEILIKFVFPEKFRSKMAYLKMKIEKKIKNLNGGKSVENIETELGLNNVTMTKLYIRNGEDLIIKSLKKKISILHKIYTFVNLKNDFNKKPFIFTGCTEESDIEQICFINLFSSAKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB3</accession>
    <name>A0ABV2AFB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000342</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000049">
        <property type="protein sequence ID" value="MES1918371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="9499" checksum="4A6997A05A771B7C" modified="2025-10-08" version="1">MFGLASSAALEPDRKCESAFCTNGIRPNFGRLSRCCKARRFRGTEFSWRDFRICARLCCCFASSRTALSDLPLNTNLLLLGKELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF3</accession>
    <name>A0ABV2AFF3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000024">
        <property type="protein sequence ID" value="MES1918179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="19057" checksum="4D6DF6C4D6348E65" modified="2025-10-08" version="1">MDEVVIFDKSHGKNTIPRGSEVIKLQKLKNRNKSFEIISRDNLSDNKSLKTILSNKKKVHIFKEKLAENVADKNKGPKNKMNFKIIGKKIKKLGTKSEMFQKKNKYHITEVSLYNNKSVPLAKKDLGRKLDNEILIEKDWADLENEIRFLDNALNKRNRIVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI0</accession>
    <name>A0ABV2AFI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alcohol dehydrogenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000422</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000064">
        <property type="protein sequence ID" value="MES1918455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050700">
        <property type="entry name" value="YIM1/Zinc_Alcohol_DH_Fams"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11695">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11695:SF294">
        <property type="entry name" value="RETICULON-4-INTERACTING PROTEIN 1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13602">
        <property type="entry name" value="ADH_zinc_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="89" mass="10519" checksum="BCA7EBCF43A7A726" modified="2025-10-08" version="1">MAKCIGESLKKKFYNRFFRKVKYSWMTIRPNSSYLKEVVDMVEQKKLNIRIDSVFPLSKLGDAFQRAESDECKGKVVILNSFKNYKKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK5</accession>
    <name>A0ABV2AFK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000168</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20405" checksum="F1ABD2351541A197" modified="2025-10-08" version="1">MFLRRFSKSDNRFNRESEESQNFSKTNTNSFSDFNGFCVFPSLELFLFFGFFDKVEIAFLTNDFAVLVAVVWIAAVMCPSAQCFVNNKMALFMNSKSSFSFEFLPILAFLTKSSKFATTLARELFSRRCAFFSISIKMVTFSKLSTLSLIVFRKTTKASIVLFLFRKFSAVSKSLFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ3</accession>
    <name>A0ABV2AFQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">U3 snoRNP protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">UTP20</name>
        <name evidence="2" type="ORF">MHBO_000460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000071">
        <property type="protein sequence ID" value="MES1918496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045924635" evidence="1">
        <location>
            <begin position="24"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="8920" checksum="7DCC5A1E3887BC0D" modified="2025-10-08" version="1">MNQNFGENWKILCLSLLSFGAVAKKGIVSKDSSLKNKLLNLWKSVLGLIENPHFWVRNAALKLVSDVLPFFDGKGISVIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG61</accession>
    <name>A0ABV2AG61_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="1">PPIase</shortName>
            <ecNumber evidence="1">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">CYP40</name>
        <name evidence="4" type="ORF">MHBO_000574</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000097">
        <property type="protein sequence ID" value="MES1918632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071:SF561">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="3">
        <location>
            <begin position="7"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="167"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="241"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="174"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="255"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="285" mass="32127" checksum="F4AA3557D2738063" modified="2025-10-08" version="1" fragment="single">MDFKRCFLDVSINGENLGRIVIKLFGNKVPRTAKNFSDICAGDKKSEETGNRLTYENCAVHRVIKNFILQSGDFEKGDGTGGESVYGRNFNDERMDIPFNKAGLVAMANAGPNTNGSQFFITCAPCPHLNGKHVVFGKVVSGMSVVRKIERVKVDSNNSPLKSVRIAKAGFAEKNPEQSEKSSGKPKKQTERPNKQLKETEQTENRKEKSKPLLKPITFIGKSGRILKGRGFTSLRHVGNFGGIGFHSETPSPERRRKEKLRRKVYRRREKPRYKIRRRNISKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG69</accession>
    <name>A0ABV2AG69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ATP-dependent DNA helicase chl1</fullName>
            <ecNumber evidence="5">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CHL1_2</name>
        <name evidence="5" type="ORF">MHBO_000417</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045028">
        <property type="entry name" value="DinG/Rad3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014013">
        <property type="entry name" value="Helic_SF1/SF2_ATP-bd_DinG/Rad3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006554">
        <property type="entry name" value="Helicase-like_DEXD_c2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010614">
        <property type="entry name" value="RAD3-like_helicase_DEAD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472:SF41">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE DDX11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472">
        <property type="entry name" value="DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06733">
        <property type="entry name" value="DEAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00488">
        <property type="entry name" value="DEXDc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51193">
        <property type="entry name" value="HELICASE_ATP_BIND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="4">
        <location>
            <begin position="4"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21758" checksum="E4C5B21058617661" modified="2025-10-08" version="1">MATEALISIFPFEPYRIQNKLMNAIVKTIKNSNIGIFESPTGTGKSLSVLCAVVSWLIDEQHNNDNIEDLPENLPGWVHDFAEPTANFEQIGAINKKRKLYKITPKSEGVKVIYLSRTHSQLNQIVDEIKKLKLEKKINVVSLGSRKNLCVHEKVVKLENIDKINNKCRDLIDSSKKCPFWGKNDDFAFNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGI0</accession>
    <name>A0ABV2AGI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tr-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000331</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000047">
        <property type="protein sequence ID" value="MES1918352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908:SF3">
        <property type="entry name" value="ELONGATION FACTOR-LIKE GTPASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908">
        <property type="entry name" value="TRANSLATION ELONGATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="1">
        <location>
            <begin position="17"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16506" checksum="D7B10EB95E9F84AA" modified="2025-10-08" version="1">MANAHFRCVKECMKQPENIRNVCIVAHVDHGKTSISDFLLASNGIVSPKNAGSFKYLDSRKDEFERRITMKTSAISLLFKYPKTKNDAEKYKNALFLINLFDSPGHLDFSVEVEQATDLSDGALVVIDVVEGICIQVFTFIEDGNRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH62</accession>
    <name>A0ABV2AH62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000175">
        <property type="protein sequence ID" value="MES1919000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8344" checksum="B5B812D653C7ABC6" modified="2025-10-08" version="1">MLSCLKGNSPKNGNNGENEQSSADVESNEEMIRKRNVIFEKFKRIVKKRKEQKAKDYMKKIDIVEIEEKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHE3</accession>
    <name>A0ABV2AHE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000193">
        <property type="protein sequence ID" value="MES1919082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16719" checksum="7133C71402D1E682" modified="2025-10-08" version="1">MAVIRKKANSTKVIKRKRSTTNKSNKANKKIRTKRNKQEKSKIKKIAIKQKNEKENKQQSKKSKNSLDDKIEEMTKTMWGESLKNMAKNKRKEKVNTILGEMEKSFAKASRKKCHSRVIEICLKYTDPEHRKIVLDELMPQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG4</accession>
    <name>A0ABV2AHG4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CFA20 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000921</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000186">
        <property type="protein sequence ID" value="MES1919047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040441">
        <property type="entry name" value="CFA20/CFAP20DC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007714">
        <property type="entry name" value="CFA20_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12458">
        <property type="entry name" value="ORF PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05018">
        <property type="entry name" value="CFA20_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CFA20" evidence="1">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7545" checksum="06DA1F9CB14C9D63" modified="2025-10-08" version="1">MPLRLEEDWNSLRINLASFTKRAYGTNFKEAVRLRICSSCYLRRAYFADVEDSDVPDDFRLVIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV7</accession>
    <name>A0ABV2AHV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Kti12, chromatin associated</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">KTI12</name>
        <name evidence="4" type="ORF">MHBO_001102</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the KTI12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000237">
        <property type="protein sequence ID" value="MES1919243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013641">
        <property type="entry name" value="KTI12/PSTK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12435">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08433">
        <property type="entry name" value="KTI12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21234" checksum="A1425158C8BBE2DC" modified="2025-10-08" version="1">MPLVILCGLPCAGKTYWANVLVEKLKNVSKNPILLINKEKLSLSADELYRSTISEKNHRSRIRANVERNLNAEKIVIADFLCHIKGLRYELYTRSKEANTTNCVLFCDESVEVCRDRNSAENVYSQKIFCDLAKRFEPPETKSRWESPMFVIKGGKPQFCWEELTDYVLSGKRLRPSFSTHKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY1</accession>
    <name>A0ABV2AHY1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Cyclin-dependent kinase 2 homolog</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Cell division control protein 2 homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">cdc2-related kinase 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_000867</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="7">May form a complex composed of at least the catalytic subunit CRK2 and a cyclin.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000172">
        <property type="protein sequence ID" value="MES1918983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050108">
        <property type="entry name" value="CDK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056">
        <property type="entry name" value="CELL DIVISION PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056:SF107">
        <property type="entry name" value="CYCLIN-DEPENDENT KINASE 11A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="68"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00038543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00039612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00041902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00042858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="403" mass="46200" checksum="790A0AE93E4BB5D0" modified="2025-10-08" version="1">MSDGNPNKRKNELEPKKTETKELTNELKKTKISKHSSSPEPPETNVLDTEEETFNPMTNSCRDIHDVYRRVNSIDQGVYGSVHQGEHKKSGKIVALKKVKIKAGHRNGFPITALRETNLLMTLKHPNIVDVKEVVIDKFDNGVFMVMEYMEHDLKHVMQHFMQNAFTVSEVKCLMQQLLKGIAFMHKNWVLHRDLKTSNLLYDNKGHLKICDFGMARKYGEPLHNYSPNVITLWYRAPELLLGDKTYGTSVDMWSAGAIMAELLLKKVLFEGQGELDQIEKIFKVLGTPNTSVWPGLKSLPGNSICASKRFRSSLKNVMSHSGRLIISEMGLTLLRSLLHYNPRRRISAEKALQHPWFKENPVPQSCDLMPTFPSRVEYRKRKKQQTSFGAGIHNRFPYNKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ15</accession>
    <name>A0ABV2AJ15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">G2/mitotic-specific cyclin-B2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CCNB2</name>
        <name evidence="2" type="ORF">MHBO_001453</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000358">
        <property type="protein sequence ID" value="MES1919661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004367">
        <property type="entry name" value="Cyclin_C-dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02984">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01332">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclin C-terminal" evidence="1">
        <location>
            <begin position="2"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17334" checksum="48B9308A89108565" modified="2025-10-08" version="1">MPYTLSFARRFLRVAMASRFERRYCEYLLELSLLDCDAVCLKFSKLAAAAVYLVLRFKDPFIDEKWSNLLEKHTKYERKKLKPIAAKLLDLVHQNSAKSKAVFRKFSRQKYGAIAKLPIKTLMNDRLKMVQNIQSKMKEENFCSEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ79</accession>
    <name>A0ABV2AJ79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">2-oxoglutarate dehydrogenase, mitochondrial</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">2-oxoglutarate dehydrogenase complex component E1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001520</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the alpha-ketoglutarate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000385">
        <property type="protein sequence ID" value="MES1919743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1150">
        <property type="entry name" value="TPP helical domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032106">
        <property type="entry name" value="2-oxogl_dehyd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011603">
        <property type="entry name" value="2oxoglutarate_DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23152:SF4">
        <property type="entry name" value="2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23152">
        <property type="entry name" value="2-OXOGLUTARATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16078">
        <property type="entry name" value="2-oxogl_dehyd_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="2-oxoglutarate dehydrogenase E1 component N-terminal" evidence="9">
        <location>
            <begin position="21"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="Dehydrogenase E1 component" evidence="8">
        <location>
            <begin position="205"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00037426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00040267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00042984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="397" mass="45741" checksum="F515E83C10C6F9C4" modified="2025-10-08" version="1">MLQKFGKRILCCKQKRLFCSTILNGTSRTFIDQQYIKWRKDRTSVQKSWDGYFSEFESSPDYKASQTFGESKSEMDNYLKIDNMVQHFRYFGHKVAKLDPLKLQKDEEIKKLANFDLSKFGLNNVKIPSMLKTRSNSILFNNERIQNTDQLRRHLKLVYCDSVGYETAHIQNEREREWLYRKIESGIFVDFEKNDKIEIFETITRSCKFEKFLSKKWPVQKRFGLEGLESMIPGIKAVIETSSNLGVENFVLGMPHRGRLNVLVNVLEKSPEQIFTEFNGGKAWKRLHRMHSGDVKYHSGHSCDLLTNFGKKVHISLVANPSHLEACNTVVLGKTRAKQEFGGDGDLAKSMGFLIHGDAAFYGQGIVYETLMMSGFKGYETGGVMHIICNNQIGYQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ87</accession>
    <name>A0ABV2AJ87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001509</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000382">
        <property type="protein sequence ID" value="MES1919729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43948">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43948:SF10">
        <property type="entry name" value="MRJ, ISOFORM E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="22"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="159"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="25806" checksum="5DD765901FC9F9AC" modified="2025-10-08" version="1">MKDDHEKCTKNKKLDKILNSDSPFKTLGLPFPILNLRKKPVWTVLQNEIEVAFKKSSLIVHPDKNDNSENSQIAFSKVREAYENLSDFTKRAECIKKYIANNTHPKLGFIPEKLKNASKEEIDKFRHKSRRREKRLKEEHFELYGDTIKKQFFERRKKADRKRSEKQFLEEENNKKEKNYFHNFENRFDDKSDEIDKSTKILEKLKRKRKRRAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB5</accession>
    <name>A0ABV2AJB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001503</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000379">
        <property type="protein sequence ID" value="MES1919722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="439" mass="52016" checksum="DE2BC7AE5E2254D5" modified="2025-10-08" version="1" fragment="single">MHLMSFNESLLDCMKIKIMLIKDENCPIELFDEKISFLPKKIKIKSGILVNNSKNIEEKEIFIKYIYDFNGEKIETFDSLFEEFNGTIIFTTEEKELDREKIIGVGMNVTIGIDKTDFYRQISKLILQIFEDFNNFIKTKNKNSNEINNKNIKNIVKLGQIYLFNNLVKSAKEKFKEAKESLNIKDFDKTIKINELIICTEYLNFEKEGTDKNSEAIDKLEQNLDLAKYTNAKIETRLSLRLKISDLYLKLNDKIGALNAVSKIDFGLIDNKQLKNFMLKIAKICEKIGFYRKKTFYLLKWTNLYKFDEQLGKNYFFYKNFADFYKIDFGSIKKMKPMSYQIERKIIDLLIGVCAEMKNYENLVLYLLYKMQYFHSRLSQEEQNEDKKILIKISQKILPEKRFDMTGLLQIDRISPIYPTESKFRVADKEMQNFELKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJD7</accession>
    <name>A0ABV2AJD7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional glutamate/proline--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">EPRS1</name>
        <name evidence="2" type="ORF">MHBO_001382</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000329">
        <property type="protein sequence ID" value="MES1919574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004831">
        <property type="term" value="F:tyrosine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002316">
        <property type="entry name" value="Pro-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004499">
        <property type="entry name" value="Pro-tRNA-ligase_IIa_arc-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43382:SF2">
        <property type="entry name" value="BIFUNCTIONAL GLUTAMATE_PROLINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43382">
        <property type="entry name" value="PROLYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01046">
        <property type="entry name" value="TRNASYNTHPRO"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="1">
        <location>
            <begin position="20"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19648" checksum="093FE22FADABC96F" modified="2025-10-08" version="1">MVDYYDVSGCYILRPNSCFIWNRIKSFFDEELSTRGVEEAYFPMFVTKTALEAEESHIEGFKPEVAWVTRSGESELSVPLAIRPTSETIMYPSFKNWVRSHRDLPLRINQWSNVVRWEFKNPTVFTIVYCLSSLQCFTDSAQLLILDKHVRFKFNRSNSVTVNISLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF4</accession>
    <name>A0ABV2AJF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulation of actin filament depolymerization</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">VLN2</name>
        <name evidence="2" type="ORF">MHBO_001582</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000410">
        <property type="protein sequence ID" value="MES1919818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.950.10">
        <property type="entry name" value="Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003128">
        <property type="entry name" value="Villin_headpiece"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036886">
        <property type="entry name" value="Villin_headpiece_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02209">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00153">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47050">
        <property type="entry name" value="VHP, Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51089">
        <property type="entry name" value="HP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HP" evidence="1">
        <location>
            <begin position="87"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17893" checksum="5DB960293E053BA8" modified="2025-10-08" version="1">MPKFCYFPPVTTFSIVSTKILFDVKGCSECGIFLNENNLNIKDKKLFCKKHSPEKSTCYKCNNNIRGKFIECLERKYHSDCFENKSCNENEFFDYKDLKDNSKLPNWIDKRKKEKYLSEKDFEKVFGMTKKSFGKLTEWQQKVVKKKLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ1</accession>
    <name>A0ABV2AJJ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Small nuclear ribonucleoprotein Sm D3</fullName>
            <shortName evidence="9">Sm-D3</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">snRNP core protein D3</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">SMD3</name>
        <name evidence="11" type="ORF">MHBO_001604</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
            <location evidence="2">Cytosol</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the snRNP core protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000419">
        <property type="protein sequence ID" value="MES1919848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030731">
        <property type="term" value="F:guanidinoacetate N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01721">
        <property type="entry name" value="Sm_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027141">
        <property type="entry name" value="LSm4/Sm_D1/D3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034099">
        <property type="entry name" value="SmD3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23338">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5 9" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6 9" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9 11" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sm" evidence="10">
        <location>
            <begin position="7"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12996" checksum="289CAE370E2F5853" modified="2025-10-08" version="1">MPVYIGVPIKILHEAEGYIATVEMKTYECYRGQLSNVEDCMNIELINVTYTAHDGQVKKRSKVYIRGSFIKLIIIPDMLKNAPVFKRIENKMTNDSSNFVILQKAIRLEWGEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM2</accession>
    <name>A0ABV2AJM2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001623</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000429">
        <property type="protein sequence ID" value="MES1919871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="23824" checksum="8E6D2EAAF1FCC33A" modified="2025-10-08" version="1" fragment="single">QDRLIIKDSENKKIPIREVVQPGQYSVQGRKYFDLILLDQERLSITTETVQCNENGTWSPSFESLNACSEYVESNPIANLGHSELFDVCMLIYPDRVNLRKDYCWFRHPENSQILAPVFDGKNYFGEGPVIGKCLKGYTLKDSLNDFFILNCKDQVAEEVKCAKKNETSVFVEAYFLDANYATQFAFTFALSGISSSFLYKMIRKIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM6</accession>
    <name>A0ABV2AJM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">26S proteasome subunit rpt4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPT4</name>
        <name evidence="4" type="ORF">MHBO_001637</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000434">
        <property type="protein sequence ID" value="MES1919885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050221">
        <property type="entry name" value="26S_Proteasome_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032501">
        <property type="entry name" value="Prot_ATP_ID_OB_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23073">
        <property type="entry name" value="26S PROTEASOME REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16450">
        <property type="entry name" value="Prot_ATP_ID_OB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasomal ATPase second OB" evidence="3">
        <location>
            <begin position="61"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22089" checksum="C0B5F0553A712256" modified="2025-10-08" version="1">MVNQEHSEMEILIKDYSKIFEQHADLEKRVKKYRMDLNAKSKLNEKIDSDLKALQNVGQLIGEILKKVSDEHYIVKLSSGPHYIVGCKERIPRSKLKIGARVALEISTLTIMSVLPREVDPTIYHMLNEDPGLVNYTDIGGLDKQIRDVRETVELPLTSPGLFKRVGIKAPKVLSDFIHSAFKLRLLFYVIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT1</accession>
    <name>A0ABV2AJT1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001514</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000383">
        <property type="protein sequence ID" value="MES1919734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13357" checksum="332491B416B7A1F4" modified="2025-10-08" version="1">MNVVKIVFDELETISLVPPVRETIDANLATDAKLKIEVGKSRSHCRDHFSPNFVFFVVLKKFDSLFLAAVSSHGTNIYHSGSEFYKCPSLNLKSFGFCTKAHINIIEMCNEFINANVIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU2</accession>
    <name>A0ABV2AJU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">guanylate kinase</fullName>
            <ecNumber evidence="2">2.7.4.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001524</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the guanylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.8" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000388">
        <property type="protein sequence ID" value="MES1919749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00071">
        <property type="entry name" value="GMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.63.10">
        <property type="entry name" value="Guanylate Kinase phosphate binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008145">
        <property type="entry name" value="GK/Ca_channel_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008144">
        <property type="entry name" value="Guanylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017665">
        <property type="entry name" value="Guanylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020590">
        <property type="entry name" value="Guanylate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03263">
        <property type="entry name" value="guanyl_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23117:SF13">
        <property type="entry name" value="GUANYLATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23117">
        <property type="entry name" value="GUANYLATE KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00625">
        <property type="entry name" value="Guanylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00072">
        <property type="entry name" value="GuKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00856">
        <property type="entry name" value="GUANYLATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50052">
        <property type="entry name" value="GUANYLATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Guanylate kinase-like" evidence="7">
        <location>
            <begin position="1"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="22168" checksum="2652604D83CDFA8E" modified="2025-10-08" version="1">MKYVICGPSGVGKGTLIKNFLARSKNFSLSVSHTTRKMRKGEENGVDYFFVDKDNFLNMVRQKQFFEWEEIHGNYYGTSLSCLHNHPKENLILEIDINGALSIKKHFLGKDLTFIFITTDLKELERRIRNRGEDDEKSIMTRIETAKKELAIFESTAEINLFDHVINSKNFEQSYRDFADILSQNKIKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK62</accession>
    <name>A0ABV2AK62_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">P-type ATPase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001788</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000499">
        <property type="protein sequence ID" value="MES1920065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032630">
        <property type="entry name" value="P_typ_ATPase_c"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16212">
        <property type="entry name" value="PhoLip_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase C-terminal" evidence="2">
        <location>
            <begin position="32"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18661" checksum="EA42884AAF223DD0" modified="2025-10-08" version="1">MLTIVTLFFVMLTIATLFFGAVLFGELLFIVTTKFLLYVLKAFIDVLLIYMVTYFVFDVNYNGADGKGLALCYVSYSIFTSMLAVMTIQVIFEIEKFNVGHVLSYMFSMPLWWVLTLSLNELSFVLDNQGCAVYAIRQIPMWIATFLSCLFCCIGQFFYRLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA4</accession>
    <name>A0ABV2AKA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001821</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000514">
        <property type="protein sequence ID" value="MES1920104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22501" checksum="D78FBA7DDB8DCEB7" modified="2025-10-08" version="1">MSLSPNDIEKLQSKLKTLKINNNIDLRNMSKALDDIFNQNLFKNVSRNRESKQNSAKIGIPSEPLIDGIPKSAQINIKKFSQIGKDSEKNKSSQIIKFESSSKIAKDVNKIQSKRIIDQIKKTYKFNKIMLSIQNGRRIKNINESYLNDYIRKQRKTISNKDLFLKKKKNRKIKRKIKAKKYRERKSAKNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD3</accession>
    <name>A0ABV2AKD3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001673</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000446">
        <property type="protein sequence ID" value="MES1919929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF29">
        <property type="entry name" value="PPR CONTAINING PLANT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="44"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="113" mass="12766" checksum="167F4073D04119CD" modified="2025-10-08" version="1">MSVRKLVPNTVVVNSYINVFAVAGDIEKAENCYFGMDRSLFKPDLGTLNSLINASSSSHCFDRAKKWFREIAKSGMKPDTYSYGHIISAASKSDFPKDAFGYFKEVFKFWLKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF3</accession>
    <name>A0ABV2AKF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UTP25 NTP hydrolase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001857</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000529">
        <property type="protein sequence ID" value="MES1920147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010678">
        <property type="entry name" value="UTP25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053940">
        <property type="entry name" value="UTP25_NTPase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12933">
        <property type="entry name" value="ORF PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12933:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 25 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22916">
        <property type="entry name" value="UTP25_NTPase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UTP25 NTP hydrolase-like" evidence="1">
        <location>
            <begin position="12"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="8005" checksum="73B9472A7B9AD7FA" modified="2025-10-08" version="1">METESSDEDSAEDGKVYNIDFLSSIEIVLLYKADLFLMQNWRHVETVLGFLNLSPSKAEHTDFFRVKSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKK3</accession>
    <name>A0ABV2AKK3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cation-independent mannose-6-phosphate receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001889</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000544">
        <property type="protein sequence ID" value="MES1920192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046042982" description="Cation-independent mannose-6-phosphate receptor" evidence="1">
        <location>
            <begin position="24"/>
            <end position="993"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="993" mass="108305" checksum="647F90BF7A95A62A" modified="2025-10-08" version="1">MSFVILSKLWIFCIPLFLPSLLSDCTIKFGSGVQVYTVADKILRDNLDVAYKDDQFLYVCKTPGDYLQDINSNGLSGAFAIVTCDGTTLLYNNEPVRDGVDCGQATQPYCLFSDTPPLTEFVFPYTLGGLNPMTFPYYQIRSAGEGVPFVVRCAGQGSWLTFEATCGTQGWTTNIDPSTECPKAEKGCPLADVTPLFKFPGSEEFYSHQTILFTTCHNPQRTAIELECSEGSYHIRENGELGPQISLLSTALACGMIEELGPSGDCNLDVDASVKALSAPSGVEREPGSALLVGDRLIFLCQANYHILDDVFNDLSKRGYLEVECTANGLESDGRLVKNGLACELSPYHQICLQNELPAKVSLVDTNPLFEVIMLGQIFNATCSGSGAWYTLSVECKGTHWAVFKDAVEITNAVSETCAAAEQSCDAFQYSEMVNFGANPPKKVLDGAEMVADCFEGEGSVNLRCDKTELQIVAVDGSVTPIGFEAVAAVCGLDTATDFQCVLDAGPGVKIYASPSGEDRPPKSHVHRGDRFVYTCETGNHVLENAFDGTDNGQRSSYIEAECTEGGIMSGGNKVLDGVTCALAQYVCLLTALPRELEATLPNENVKTFLDEDQIDAVCSGAGDWYPFRLRCEHGEWKVFLNGFEVEEPLSHLCENVRDSCDLGRLSSIVHLGLNQVPRVMQGEHVTAQCFGNNNVLSFLCHKGAFEIDTSSQTTVPATFEAVSERCGLLLSAGSICILSFGTGVVAYSKPSNEQRSNGTSAHFGDNFIYTCGQEGYVLSDILDDGSILGFARIECLSDGLKTGGRAVQNTTQCQQATGSSFCLARNLPTGANFEAPEDVSTFISGDHFAARCSGMADWLHFEMRCEDGVWEAVRDGEVVTESLEDLCTRARNGCDARKVNFLAVMDDSNVERVLNDVEVTGRCHLSNKNIAFRCVEEDFELTFENFTTVRTYFNAVVEFCGYRSGSKAVTGFYKLDIRSKFYFFKHISKYFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT4</accession>
    <name>A0ABV2AKT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Serine/arginine-rich splicing factor 12</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SRSF12</name>
        <name evidence="3" type="ORF">MHBO_001967</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000584">
        <property type="protein sequence ID" value="MES1920281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050441">
        <property type="entry name" value="RBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48034">
        <property type="entry name" value="TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="2">
        <location>
            <begin position="15"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13874" checksum="535C78A0E3430A66" modified="2025-10-08" version="1">MQKSSKSNGKMAVSKTLFIKNISHKTNMKTIRDIFLPFGTLLDIHVPVHYGTNKPRGFCYVEFCNKKSAIRAKKAVDGLKINGKRLKIVFSKSTRKTSSHYSKDGNFERIVAAIEDFSSDDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKZ7</accession>
    <name>A0ABV2AKZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001998</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000606">
        <property type="protein sequence ID" value="MES1920315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019189">
        <property type="entry name" value="Ribosomal_mL41"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09809">
        <property type="entry name" value="MRP-L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12702" checksum="514CFC41FF690D43" modified="2025-10-08" version="1">MFRNFFSYKKRWIHRSGRLKGPKSYDPFRQRFKKLGRRKNNPLTTKTAPRIFQKGNRDWKMGKRVDKKYVAFDFERQQQILNFNIPDLSKFKLKPYVSVAKLDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL53</accession>
    <name>A0ABV2AL53_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002052</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000638">
        <property type="protein sequence ID" value="MES1920375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="130" mass="14885" checksum="2E9D8BE87EFBF367" modified="2025-10-08" version="1">MTQSLIFRRMARTALRPVIKRRLFYSAATFAATAFFSKTAFTRCFAESAEPEPKSWSVDSNGKRVVLFAYDNSFGSEFAVKWALANFFKNGDLIILVNVVPDLPNDPIGFTFDSFKFLQIKTLLYRLFSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB7</accession>
    <name>A0ABV2ALB7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Calcium-independent phospholipase A2-gamma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PNPLA8</name>
        <name evidence="3" type="ORF">MHBO_002131</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000685">
        <property type="protein sequence ID" value="MES1920466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1090.10">
        <property type="entry name" value="Cytosolic phospholipase A2 catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24185">
        <property type="entry name" value="CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24185:SF1">
        <property type="entry name" value="CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="FabD/lysophospholipase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="18664" checksum="0E0E5AA43F391650" modified="2025-10-08" version="1">MHNWKVFYPPVKINGIGTFVDGALVAANPTEAAVVEASEMWPDNPISLVVSVGTGKKRLLPREHNGRTNAEWAITMIELLLESERVSGRLEWLGRELKRVHQSDKVPDFFRINTPAELDLGNIGLDEKSDRVLKEMVMKTRVWLKTDQVVQAKLSLIADLLCRYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC1</accession>
    <name>A0ABV2ALC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transducin (Beta)-like 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">TBL3</name>
        <name evidence="4" type="ORF">MHBO_001811</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000510">
        <property type="protein sequence ID" value="MES1920092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19854">
        <property type="entry name" value="TRANSDUCIN BETA-LIKE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19854:SF15">
        <property type="entry name" value="TRANSDUCIN BETA-LIKE PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="105"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16313" checksum="65CFEDBF37A285F7" modified="2025-10-08" version="1" fragment="single">MKEHVAKIKSILFACETQNLLSASDDLCIKKWPLAKFLTKNQNPQIENGDSEETNETSSVDTVKIASDSINSVAISDDEKYVAVARTNPAILVLDFDDLKVRGELNGHRKAVWDVKFLQREKILLSCSSDKTVRVWSLRNMSCLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD6</accession>
    <name>A0ABV2ALD6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002167</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000707">
        <property type="protein sequence ID" value="MES1920501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="200"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="27510" checksum="80B021B71DDDCEEB" modified="2025-10-08" version="1">MYIVLSPFKIIRFSLSEFSLLFFLFPNFIFIVETYLERKSSPENATNFYLFFNIIFCCILMWLLPFIFHPISLNTNLIIAVNFALLLICFYVCYKIFSKKVNLDVTNSLFTLFFTLNVICLSYINFSLALVNSIAITPFLSISRTKTSTCKKFVLFVYLFFLSNFFFGVLYSVSNEKSQFGKMWEDLLKGYLDVTTFRNINYFCFFVHFFPSLFLLLFRINFRCKFGKDKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH6</accession>
    <name>A0ABV2ALH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000712">
        <property type="protein sequence ID" value="MES1920509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="224"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="128"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28437" checksum="6CCF27633690697B" modified="2025-10-08" version="1" fragment="single">MNGTNAETQGEPTLDDSEALDLIGSQLLESINAMSFEEDGPSFRNKKIDSRKQSSFNGKTVQNGAAASTSKQNLPKSQNQQIGDVNFEEIYPKLAFFNLSKPKGKSSKQNKISNSAKSVAKQTRKNGKQNISANGSHSNKKTENSVWDKAISSKIKANNMKSKNLNIKKKTRTTEKNYFAEKKKRIKNVKTESVENDRKNGKILKFLPKWKYLKEKTLKNVQNTKTASKDKNFSEKQNFEKIGQKKNFNNFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM96</accession>
    <name>A0ABV2AM96_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3b</fullName>
            <ecNumber evidence="14">2.4.99.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">STT3B</name>
        <name evidence="14" type="ORF">MHBO_002421</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Endomembrane system</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the STT3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.99.18" evidence="14"/>
    <dbReference type="EMBL" id="JBDODL010000863">
        <property type="protein sequence ID" value="MES1920785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004579">
        <property type="term" value="F:dolichyl-diphosphooligosaccharide-protein glycotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003674">
        <property type="entry name" value="Oligo_trans_STT3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13872">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13872:SF1">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 14" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 14" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1920785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13586" checksum="11A161695B547EFE" modified="2025-10-08" version="1" fragment="single">VDYVLVLFGGKIGYNADDLAKAYWIIKITSGYYDEIKEEVNFNIGVDGSSRFKRSLLFKMLYYRFHEVNYGGYDLARNQKLAEEVELKYLEEAYTTKNWLLRIYRVKKPSEVSDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI1</accession>
    <name>A0ABV2AMI1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002480</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000911">
        <property type="protein sequence ID" value="MES1920856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12317">
        <property type="entry name" value="RRM4_RBM19_RRM3_MRD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050374">
        <property type="entry name" value="RRT5_SRSF_SR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23003:SF3">
        <property type="entry name" value="FI21236P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23003">
        <property type="entry name" value="RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="45"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="230"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="342"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="444"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="11"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="490" mass="56263" checksum="73E1604AC4E5A090" modified="2025-10-08" version="1" fragment="single">MRPKTSLKQFVKGEKEQPLSKIDKTSPKNDSENDKNLSLKSTRKKRIFVLNIPYSATEKEIADFFSVYGNIEEVHLPQDMLNRSKGFCFVRFVDTNSVQKILTEQKVIFQGRLLRIKVAANNPNENFDMDDKNYKKTKMRKIRKDYQKAPKNYWNNLFLRSDTIADVVAKEKNISKEDLLKDDDKQSAAVKMALSETKVISETKDYLIKNGVNEDIFSLDSLSKCKRSNRCIIVKNLPFSTKNGEIEEVFTKHGAVDRILVPPSKALAIILFMDFLDAKKAYQLLAYRKFKNVPLYLEWAPENIFSSKSNVQMDKSEKATNNKNKNERISGFSGFSVQSESCTVFVKNISFHTKTEKLRKLFSTVEGFLSATVKTKKIIDEKTKKLKELSLGYGFIEFDNSENAKKAIKTLHNVKLDGHELRLSFSYSSTGLKKDTKNDDDINSKLIIKNLPFEATSNELKQLFGEFGVIKSCRLPKRTQSHRGFAFIEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU1</accession>
    <name>A0ABV2AMU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002559</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000978">
        <property type="protein sequence ID" value="MES1920958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006886">
        <property type="entry name" value="RNA_pol_III_Rpc5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12069:SF0">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12069">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04801">
        <property type="entry name" value="RPC5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="486" mass="56563" checksum="D01A8F532FC9AF57" modified="2025-10-08" version="1">MSEKQTEIDYSLIVKRIPVIINKPVKKSICLLKFHLRNNDRPYLSEKNIFKLESVKIKKKSLKLEICLNTNTEIQHFNPENSFPRDKLILVSRNIPNRPNYALFNVINGKMVLTPVKHIFMMSPDFSYINELAKNEKLEKSAKSNKKSEENLKMITIVQKLRRDNKTSNMAKFVAFKDNLNASQQEKFVTLTETKPNLINQLLEKESFAIQKMVKNSNFVDIIRNESNKKKNIVPKNPNFVRKNLSKFYIQSNALNLENKIIAILKNRGTSTLMEISKILKIEENDEKKVKQLQSLLFKNAFYLHGVWVARSKLIYGDIQKRCRFARDLLIAMFGYSPDGSIYKSNWDLVANLKDDKSLAILSEISKFDSLNKKWTLKNLGGFIDFEFVEQQKYLLSKLYVISKRVLAGKGSENDELDLHFADFLSAEFKSAQNEALNFLKTNFDINGVCSLNMLEKRFEAEIRKLGFLANFYITFQKLEFNFYLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX8</accession>
    <name>A0ABV2AMX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Myosin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002595</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001002">
        <property type="protein sequence ID" value="MES1920990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140:SF706">
        <property type="entry name" value="DILUTE CLASS UNCONVENTIONAL MYOSIN, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140">
        <property type="entry name" value="MYOSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00193">
        <property type="entry name" value="MYOSINHEAVY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0505">Motor protein</keyword>
    <keyword evidence="3 6" id="KW-0518">Myosin</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myosin motor" evidence="7">
        <location>
            <begin position="2"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="95"/>
            <end position="102"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="14979" checksum="EF3DC618F2B21AD8" modified="2025-10-08" version="1" fragment="single">MDGVPDMTTLLYLEEDNVIHNLKVRFEKKSVYTNIGSILLSINPYVWIESLYGDKVMATYRKEPPSTNPHCYQIASRALNNLRATSENQSIIICGESGAGKTESAKCCISHLAKSRKSAASKNFVEQVISVNPLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN03</accession>
    <name>A0ABV2AN03_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Adenylate kinase active site lid domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002506</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the adenylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000933">
        <property type="protein sequence ID" value="MES1920889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007862">
        <property type="entry name" value="Adenylate_kinase_lid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="NUCLEOTIDE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00406">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05191">
        <property type="entry name" value="ADK_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Adenylate kinase active site lid" evidence="5">
        <location>
            <begin position="58"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF05191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="18185" checksum="089A0D7C90AEC666" modified="2025-10-08" version="1">MEIINDRIREKDALNGYILDGVPRTLKQIHLLDKVSQINLVLEINLKEEILIEKALARRACEKCGESYNLYSIDTKEYKMPPLLPKRTGHCDKCDGKLFQRADDNREIIEKRLNLYKDNYGPIKRAYLERGLLQRFDLRLGVDKMWPILKSYFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN79</accession>
    <name>A0ABV2AN79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002703</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001097">
        <property type="protein sequence ID" value="MES1921121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="2">
        <location>
            <begin position="201"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30255" checksum="5297E824E6292B10" modified="2025-10-08" version="1" fragment="single">SFPKHGKSFQFLQNERKQQIMSTLVNRKSLQNNDFSLREDIITIEDESSDDSLKYSQKSDRFKSKIRSKNTNLSINFIDLSKIEETKNIWKSKPKLPNCTKIEKREKRIKKYYKNPSNRPFDRSDLLSCKKCHSVLHSSRFCGEKKAKNFCVQCGKETAKTNARGSCKNCVNEKFLEIRNSDLTNFFPKIFPNLTRKFSNCCNCGKKGHIHKNCSEKKLSPKVIKEGLRAKAHLAKKRKNKIAKSGFRRRMFPIKSKKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANC1</accession>
    <name>A0ABV2ANC1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Geranylgeranyl transferase type-2 subunit beta</fullName>
            <ecNumber evidence="8">2.5.1.60</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">BET2</name>
        <name evidence="10" type="ORF">MHBO_002745</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>geranylgeranyl diphosphate + L-cysteinyl-[protein] = S-geranylgeranyl-L-cysteinyl-[protein] + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21240"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11537"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57533"/>
            <dbReference type="ChEBI" id="CHEBI:86021"/>
            <dbReference type="EC" id="2.5.1.60"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the protein prenyltransferase subunit beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.60" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010001127">
        <property type="protein sequence ID" value="MES1921176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004663">
        <property type="term" value="F:Rab geranylgeranyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02894">
        <property type="entry name" value="GGTase-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045089">
        <property type="entry name" value="PGGT1B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001330">
        <property type="entry name" value="Prenyltrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026873">
        <property type="entry name" value="Ptb1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774">
        <property type="entry name" value="GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774:SF11">
        <property type="entry name" value="GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00432">
        <property type="entry name" value="Prenyltrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 8" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 8 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Prenyltransferase alpha-alpha toroid" evidence="9">
        <location>
            <begin position="3"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="34143" checksum="DCBF9C64EA2F5F41" modified="2025-10-08" version="1">MRLLSEKHIEFVVNLEKSKDQHLEYCLMEYTQLSVIYWSLMSLHILKSVGNLDRNNIISFVLQCQNDDGGFAGYPNHDSHILQTLSAIQILLILGATQKLDVEKTTDYIKNLQNEDGSFKGDKWGEVDSKFSYCAICALDLIGNLDSLDLEKAAEFILSCCNFDAGFGNVPSGESHSGQIFCCVAALSIVGRLDKVDKDALGLWLSHRQVSSGGLNGRPEKKEDVCYSWWVLSSLDVLGKLDWVDEDSISDFILNCQDCDNGGIADKPGNVSDVFHTYFGLAGLALLGKFGLEKVDPVYALPVSVIKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY2</accession>
    <name>A0ABV2ANY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002637</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001043">
        <property type="protein sequence ID" value="MES1921037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="119" mass="14209" checksum="0906ADBB8AA762F7" modified="2025-10-08" version="1">MAYRYILFYNAPWDTDSLALRDRLSSLFLKYNVPIYSINVDFMPDLDKLTKRVNVIPFFVFSKQGHMLFYTKFKDPDIIEEYVMKFVTAPDRADFFPPVIEEPPFHIARHIQNLRNLPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP22</accession>
    <name>A0ABV2AP22_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">SNF1-related protein kinase catalytic subunit alpha kin10</fullName>
            <ecNumber evidence="9">2.7.11.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">KIN10</name>
        <name evidence="9" type="ORF">MHBO_002772</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.11" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010001155">
        <property type="protein sequence ID" value="MES1921209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004691">
        <property type="term" value="F:cAMP-dependent protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24346:SF82">
        <property type="entry name" value="KP78A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24346">
        <property type="entry name" value="MAP/MICROTUBULE AFFINITY-REGULATING KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="UBA" evidence="8">
        <location>
            <begin position="205"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="268"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="278"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="332" mass="37842" checksum="0586FF018F57FC53" modified="2025-10-08" version="1">MEYISGGELYDFIISNEKVLSTKSQLPEDKARHFFQQIISGVSYCHAHMVVHRDLKPENLLLDKNNNVRIADFGLSNMMKDGHFMETSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLSGYLPFDDANIKELFRKIKCAEYSPLQDVSEEVNNLIARMLEVDPLKRISLEEIAEDEWFKKDLPPDMCVITKTAYGRTEEEIDEEVMQLVIDMGYDKDLLTEALKMGPDLLTKPLSEKKQNEQNDSKMQEMRQIAVAYHLLTDQHRKKNMKRSKSTDKKEKTPEKPFVEEQNSAKIETLNEGVSARAFFQRVGHGGLKSVFVLISCIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP52</accession>
    <name>A0ABV2AP52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pumilio-homology domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">puf6</name>
        <name evidence="3" type="ORF">MHBO_002971</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001351">
        <property type="protein sequence ID" value="MES1921440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012959">
        <property type="entry name" value="CPL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040059">
        <property type="entry name" value="PUM3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13389">
        <property type="entry name" value="PUMILIO HOMOLOG 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13389:SF0">
        <property type="entry name" value="PUMILIO HOMOLOG 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08144">
        <property type="entry name" value="CPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="CPL" evidence="2">
        <location>
            <begin position="150"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="341" mass="39748" checksum="647542D609D8D8A0" modified="2025-10-08" version="1">MVTTAFSHFLLFQYAINGEKMKISGLFDKLHHLPLSLGQSKYGCKFASLMYSCLSPKQKKNFIREIKNNITEMVCDEHGWTIVEKCLTNTDDTVLIHKKIMVPIIKELEKENSNLIRNKNFLKTILRLILFTNKNGENMSENKNGENLDQILEDFGKMAFCKKSCSQRRNEILEKFLNPLKIAIKKNFEFLVETFFGCELLIAIIKESLNAKTTFPTLDKTSTKLAKTTAKYLASKGEKLNFKVNFAKRFVLMFDDSEKTNKGTEKLRKIFFESFFANFKKRFYDEKAENAKIDQKNVINWLKSNIVFAVLAIIKMDRFLRDFPVHRDLISAIKNNKKFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP67</accession>
    <name>A0ABV2AP67_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BPL/LPL catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003000</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the biotin--protein ligase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001378">
        <property type="protein sequence ID" value="MES1921469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16442">
        <property type="entry name" value="BPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004408">
        <property type="entry name" value="Biotin_CoA_COase_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00121">
        <property type="entry name" value="birA_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12835">
        <property type="entry name" value="BIOTIN PROTEIN LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12835:SF5">
        <property type="entry name" value="BIOTIN--PROTEIN LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03099">
        <property type="entry name" value="BPL_LplA_LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="3">
        <location>
            <begin position="55"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="301" mass="35274" checksum="CC61832A35401B81" modified="2025-10-08" version="1">MSFEINALFSGECKNIKENKLKFENIKINPFFKMADFLQIIQKRNFDFDYFFTKFSKNKLFRHFLHSDLITSTQTLLANQLSWLPDGSVFIAHKQINGVGRKNNVWESPEGCLMFSFKIIINKNNIHFLQYFVTLMLLNAIKKTDNFKNIYIKWPNDIYFDKKIKIGGVLCNRVPGKHNEYVCGIGLNVYNKSPTTCLSEISTSAKLPKHLAEDILFDFLTIFSSNFEKFEENGFCGYFLKKYYQFWMHSDQKVNVRNRDFVIKGIDEFGYLKVVDDLGEFSTLMPDGNRFDFLNGLIIQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ28</accession>
    <name>A0ABV2AQ28_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ubiquitin-like protease family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003310</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C48 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001754">
        <property type="protein sequence ID" value="MES1921780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.395.10">
        <property type="entry name" value="Adenoviral Proteinase, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003653">
        <property type="entry name" value="Peptidase_C48_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12606">
        <property type="entry name" value="SENTRIN/SUMO-SPECIFIC PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12606:SF1">
        <property type="entry name" value="UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02902">
        <property type="entry name" value="Peptidase_C48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0788">Thiol protease</keyword>
    <feature type="domain" description="Ubiquitin-like protease family profile" evidence="5">
        <location>
            <begin position="2"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="10453" checksum="F4C1D63E1309D388" modified="2025-10-08" version="1">MKSLRRYLEDEHKDKKSQNLRLEFETKMVRNLPRQENGFDCGVFVCKAAEFLSDGMPLVYKQSDMGLLRKRMALEIMMKKTDSEIFEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ37</accession>
    <name>A0ABV2AQ37_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">VPS37 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003332</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VPS37 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001781">
        <property type="protein sequence ID" value="MES1921797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.660">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037202">
        <property type="entry name" value="ESCRT_assembly_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029012">
        <property type="entry name" value="Helix_hairpin_bin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009851">
        <property type="entry name" value="Mod_r"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07200">
        <property type="entry name" value="Mod_r"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140111">
        <property type="entry name" value="Endosomal sorting complex assembly domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0967">Endosome</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="VPS37 C-terminal" evidence="6">
        <location>
            <begin position="28"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19696" checksum="69C4EBF6B97AF74B" modified="2025-10-08" version="1">MNNPNSDQNNLIRVLKNEADNLLQYATERDLVCLYNDPSKLEEFIKNLNGVRDFEAKIEKAHENLIMLAKNLSFKEEYDKNFEKDIELVQSYNKLVTDNKQLHNNNSVSDLLDKFESSLVEISEKTENLESGIKRKDIRLNQFVEDFSNEREKYHRVKALKELLENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ43</accession>
    <name>A0ABV2AQ43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003326</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001772">
        <property type="protein sequence ID" value="MES1921793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="121"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="244"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="417" mass="47175" checksum="CCFBF0C7145AA765" modified="2025-10-08" version="1" fragment="single">LGETNNKCGDLEMGNQQQLAIATRCLNKLNACIVKNNKRGYTKQLNEGDLESTVDQVCDEMTALFKSNSKLRDDISRTNERADASHTATHKKASQLSKFKADNASLLKEKLTLSKQLRVVEDKYEAELGTLKVENHRLNTEIANANVEIGKLKTEIGIRDTSIDQHQSGLETLQIRADMFERQLRDSNARCTSFLESNNALNTKLSEINDSHEKLTSECNRIRMDSADESKVSREELDKANGIVADLHKRLEFASQKVVEAEKKTTDYSQQISCTMQTNRSLNDTNVGLRDKLKKTNEHLKNTEELYETLQSSTNDNIRQLREQLDRGQRDHDSTVSQLHSQLEELINTNELRNSEITRLNAAQVELAKVKRNLEGVNTANAKDLQTRKETVTDLEGRLRRVMEQAGTINDKLTATS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ98</accession>
    <name>A0ABV2AQ98_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TLDc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003043</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001435">
        <property type="protein sequence ID" value="MES1921517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006616">
        <property type="entry name" value="DM9_repeat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31649">
        <property type="entry name" value="AGAP009604-PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31649:SF1">
        <property type="entry name" value="FARNESOIC ACID O-METHYL TRANSFERASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11901">
        <property type="entry name" value="DM9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="329" mass="38054" checksum="0F557EA1E66CEC18" modified="2025-10-08" version="1">MRCDPFNFGLEDALKSKGVLKRMSLVKKEFLDRVNKSEKEKWVSLMEELGFELLKIDSVSATKKELVWINEKIRFGKARSFLFEKFDSEPNKTKKLLLNEQNEEQKLLKVQNYLKLSFNTHFFGSDQVRVYKKGESSFVLDKSVASWRLICAKSGKFPENVFSFSNLPNCENLCENEKKSCNATKIPKKQQISEPTKKFDPKNLVITRSSFKNDFRCGHSNYDKTSESFFCWREFQLITNDFQVLCGNQFKWQSVPNADIPDNAIIVGGGDMNKVTFPARVFKDDRFFVGEVCPGDIGDERENSALKCRFYNGMASFSSEFEVLVFEKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG2</accession>
    <name>A0ABV2AQG2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001938">
        <property type="protein sequence ID" value="MES1921917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11519" checksum="4F2E0154A4977B38" modified="2025-10-08" version="1">MRLSYICFFFKEGNHSGLTISVGDNSGRKCYSGLFPENTGTIFCNRVLKTKILNITFDLEIEVQEVEVYGGKIKSMEMTRSLTRYVHSAPNSNSSSILASILI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ5</accession>
    <name>A0ABV2AQQ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC1 atypical kinase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003514</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002037">
        <property type="protein sequence ID" value="MES1921991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051409">
        <property type="entry name" value="Atypical_kinase_ADCK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851:SF3">
        <property type="entry name" value="COENZYME Q8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC1 atypical kinase-like" evidence="1">
        <location>
            <begin position="2"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15121" checksum="079F3F37F43F0AB0" modified="2025-10-08" version="1">MDNVIDAARIELAREVDYELEARQQLEMKELLKGYEKVNVPKVFKEVSTKHVLAVEFVEGKPVNKVSDISQDERNSIAFRLLDITLLELFQYRFMQTDPNWSNFLLTIIFWHFSFKNLRRLQYIGNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU8</accession>
    <name>A0ABV2AQU8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003563</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002139">
        <property type="protein sequence ID" value="MES1922048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10311" checksum="13082740B054D398" modified="2025-10-08" version="1">MTTSSGKGISHIFPFDFEGPTNPQKTYQGSLSHAEIAIKMGKATNGIKGPWRFTYLGLDFLTSNCIDYMHCVLLGVTKKLIALWLSKVLITIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR24</accession>
    <name>A0ABV2AR24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003643</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002257">
        <property type="protein sequence ID" value="MES1922128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="141"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="225" mass="25311" checksum="DF0B2D344E68AF6B" modified="2025-10-08" version="1">MTTEEDIRDNEITTTSSTKATATAVTKSNKFLSGSSMYIITGLIGLFVLFFGIYVSVSVYKKTIHVRASRKHIVEQIQKVDPNYTALHTRSEIQPHVTHSGQHGNPASNFSPVFDDDIYYEEVDVYNSADESNMLENYQVPSETNNQFNPHTYLSRPTDSYQTPVADEYLTPVADTYLTPVEDAYLTPVEDAYLTPVEDAYLTPVEDAYSTPVANARHEYIDVIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR56</accession>
    <name>A0ABV2AR56_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="6">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003636</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="6">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010002249">
        <property type="protein sequence ID" value="MES1922122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="9">
        <location>
            <begin position="43"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="74"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="43"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="22242" checksum="30864E3CF311ED8D" modified="2025-10-08" version="1">MSLEENEQNDTEAPLGAKLSKDDQIETNWGEISEQLGVPEIVERFEDMEINPKILRGLFTYGFEEPSSIQQRGVIAVNTGRHVIAQAQSGTGKTATFVLGTLNRIDLDLPKCQVLVLAPTRELANQIYDVYNAIGYHLKADGFEVLACVGGTSVDEDQRALRKGVHIVVGTPGRVRHLAENGDLQLKHIRSFVLDEAFPNSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR60</accession>
    <name>A0ABV2AR60_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Translin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003682</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002317">
        <property type="protein sequence ID" value="MES1922165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14820">
        <property type="entry name" value="TRAX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.190">
        <property type="entry name" value="Translin, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002848">
        <property type="entry name" value="Translin_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016068">
        <property type="entry name" value="Translin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036081">
        <property type="entry name" value="Translin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10741">
        <property type="entry name" value="TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01997">
        <property type="entry name" value="Translin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74784">
        <property type="entry name" value="Translin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="158" mass="18469" checksum="B7DF3E71D08E1F90" modified="2025-10-08" version="1">MSENEVIESFAKYKTEINERNDKREEIVVLSRSITKDAKRVIFHLHRIVKSPENKVISEAEKMLAKVRSNICKISDKILGEFYPKDYYLHERLYSFGLQEYIEAESFMFYLKNGALISISEIEDLLENAHENGKRLVLSTNNYILGIADLTFIILEKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR61</accession>
    <name>A0ABV2AR61_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">CAAX farnesyltransferase (FTase) subunit beta</fullName>
            <ecNumber evidence="9">2.5.1.58</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">RAM1</name>
        <name evidence="9" type="ORF">MHBO_003678</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein prenyltransferase subunit beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.58" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010002312">
        <property type="protein sequence ID" value="MES1922161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004660">
        <property type="term" value="F:protein farnesyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045089">
        <property type="entry name" value="PGGT1B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001330">
        <property type="entry name" value="Prenyltrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774">
        <property type="entry name" value="GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774:SF6">
        <property type="entry name" value="PROTEIN FARNESYLTRANSFERASE SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00432">
        <property type="entry name" value="Prenyltrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Prenyltransferase alpha-alpha toroid" evidence="8">
        <location>
            <begin position="40"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="27052" checksum="12985DA0013529A0" modified="2025-10-08" version="1">MSDISSKTMFDRKNCFSKVYKELMQNGETPLDNQKTARAVAAKLSKTKKSMIVESSKPCFLFWGVNSICFLDQLHNHKNLVDKSIEYLESISLSETTKGAFSGGYMQMPDLANTFASVCVVVAINNTETRNRVLNKRKIKEFLMRMKNEDGSFSMHENGESDCRSIYSAVATASMLNILSPELTKNVVDFIEKFHVHFQLSDVRRRFWCSAGHRSAWRILFLRIRNSLHSQKNDKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARH2</accession>
    <name>A0ABV2ARH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003778</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002496">
        <property type="protein sequence ID" value="MES1922270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="31132" checksum="AAF4CF2D29D52CD2" modified="2025-10-08" version="1">MDTTNTDDPGDEIGSEQLPKPQSIFSLDLCSIVTLYNEEKLLINVTDPIIIATVESEETNLGIRIIKRDQVRIIEEEINRLLANSIPFAMAIKTDPKEISGVTFTEVFYSGYNLTSLTMGNINDLKCLRDELLKRRTLCTLPCIDVPESYLPNEILILGSKYISLQEYYDSGKTLSTDDFIQMLYQTLDFVKTLDRLNLCLQKTGLSDFCRNKKGNFFFVPLHLLKRVGNPVENFKNYWEFIVNAFESQKWSKAGWMIINIKKKLMENLNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU6</accession>
    <name>A0ABV2ARU6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AMP-activated serine/threonine-protein kinase regulatory subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">SNF4</name>
        <name evidence="1" type="ORF">MHBO_003903</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002716">
        <property type="protein sequence ID" value="MES1922393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7585" checksum="8C7E9E51DE1C734C" modified="2025-10-08" version="1">MREINLGDLVISGLGNFTNYSTANINDPILQVLSKIRDKKLYCLPLINNEGIYIDSFTSSDVRVFFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV4</accession>
    <name>A0ABV2ARV4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003906</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002719">
        <property type="protein sequence ID" value="MES1922395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="74"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="270" mass="31333" checksum="7C20D8F7760444FA" modified="2025-10-08" version="1" fragment="single">MPNTGISLKGLHNMSLHNMQKNIHRGMQIPNHHLPKMPVAGNNANQALMNSIKKIGYGIPPRQFENRRPNHARMHREREWQSSSPFQDDEIRSPIEDSCRPNCPSAQKINTYKTIYQVKDNERRCNRNKLQKVLQEIVVHRNKRSIRGALESDYLPSKEMLIKPIPKNSEQILKNLLDSVEIMDRGHILEALSLSDIRQAIRMKIILSNKTSLRAIFRYFHAKTEQEDWVYFCSIVVRFAKFVAVLTQILSIAIISPKILQFCKSKIAIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS40</accession>
    <name>A0ABV2AS40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Synaptojanin-1</fullName>
            <ecNumber evidence="2">3.1.3.36</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SYNJ1</name>
        <name evidence="2" type="ORF">MHBO_004008</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.36" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010002939">
        <property type="protein sequence ID" value="MES1922490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004439">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046985">
        <property type="entry name" value="IP5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000300">
        <property type="entry name" value="IPPc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200">
        <property type="entry name" value="INOSITOL 5-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200:SF275">
        <property type="entry name" value="LD06095P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22669">
        <property type="entry name" value="Exo_endo_phos2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inositol polyphosphate-related phosphatase" evidence="1">
        <location>
            <begin position="13"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="19644" checksum="4D898B06A27E9070" modified="2025-10-08" version="1">MKKAPQTLSLDKRVNKWKEFFKKQLGTQFRLIRCKNLLGLCLLIYSHESLNAEIDSKKNVALDNYAKIIVNKGAIAVKMSINSTNLTFITSHFSAGSEHTGKRNNQYLKCAKAFSGYLENSHVFWFGDFNYRLEDISVEEAKSLIEHKNYQELLKHDQVNFGKSKKKLKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS50</accession>
    <name>A0ABV2AS50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002975">
        <property type="protein sequence ID" value="MES1922503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="103"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="26906" checksum="B19555B8A995E33D" modified="2025-10-08" version="1">MIFESEDEDHSKILRKFKLENWEEPYKNPHCQLCKMAREMPCGDFFLSILEGDYDLQHNFNGTDKEFEKVRDFILMSEMEKYSECHRRPETQLEWYKYNKKRFEELGKDVQKTEKNLEKLKKLLFVVNENKNEYIGDGKRKSPKLKFDEEKKIAIEVLEALKSKFDESEFVDDKNELELNDENLAKLDKYIDDETKEIEYNKNEIIELKRSIEEYENLQNIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG5</accession>
    <name>A0ABV2ASG5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Peptidase M16 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003851</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002617">
        <property type="protein sequence ID" value="MES1922343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001431">
        <property type="entry name" value="Pept_M16_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050626">
        <property type="entry name" value="Peptidase_M16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690:SF18">
        <property type="entry name" value="INSULIN-DEGRADING ENZYME-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690">
        <property type="entry name" value="NARDILYSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00143">
        <property type="entry name" value="INSULINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase M16 N-terminal" evidence="7">
        <location>
            <begin position="31"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21712" checksum="DF107C0E08C840AC" modified="2025-10-08" version="1">MVDQTEQTNPTKSPEDERQYRIAVLKNGIKAVLVSDPETEKGAVCMRVGIGSFSDPVDLPGTAHFLEHMLFLGTQKFPKEDFFENFLQENGGMSNAMTDNEDTKYFYDVHHTGLLPSLEKFASFFTCPLLRRESSKREINAIQSEFEMDLPHDSWRFHQLAAHISDPKTVLNRFSIGILPFLIANFGNSHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL3</accession>
    <name>A0ABV2ASL3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004174</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003342">
        <property type="protein sequence ID" value="MES1922656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="103" mass="12062" checksum="551ADA82E858D75D" modified="2025-10-08" version="1">MTNLKSSFNILFIAIIIMIVVFYNIAIDLIRILEFCLKCLCKILMKANCSIHIFLKKRLECFFRINTKVSGAKHKILEEKNDRNKNISNLKSTNKKKLTKLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM2</accession>
    <name>A0ABV2ASM2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004187</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003377">
        <property type="protein sequence ID" value="MES1922669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="64"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="9852" checksum="8335D30A86E6F650" modified="2025-10-08" version="1">MKHRVTFGGGCAYMYDSGLSSRKEINVEHQTLSESKVRRSWGAIRKCKVKESIINMYDSILPSSDQEDFASAPPDSKFSKQISSGTFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM4</accession>
    <name>A0ABV2ASM4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">40S ribosomal protein S18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004084</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003117">
        <property type="protein sequence ID" value="MES1922569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.910.10">
        <property type="entry name" value="30s ribosomal protein s13, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01315">
        <property type="entry name" value="Ribosomal_uS13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027437">
        <property type="entry name" value="Rbsml_uS13_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001892">
        <property type="entry name" value="Ribosomal_uS13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_uS13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018269">
        <property type="entry name" value="Ribosomal_uS13_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003140">
        <property type="entry name" value="PRK04053.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871:SF3">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00416">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002134">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="S13-like H2TH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00646">
        <property type="entry name" value="RIBOSOMAL_S13_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50159">
        <property type="entry name" value="RIBOSOMAL_S13_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="134"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="161" mass="18459" checksum="703BA21F34D1B17E" modified="2025-10-08" version="1">MADEENKNKFQLIIRIQNTNIDGKRKVLYSLSEIKGIGKRFADVVCKKANVDPNKRAGDLTSEEVDNLNAVIVNPLAFNVPVWMLNRRRDMLTGKNLHLVSSKIHANLRENLERMKKIKLHRGMRHHLGFKVRGQHTNSTGRHSKTVGKFNRKKKKVTAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN5</accession>
    <name>A0ABV2ASN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002708">
        <property type="protein sequence ID" value="MES1922387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14876" checksum="953898F6BE6C0D35" modified="2025-10-08" version="1">MLLFSDIDDDFVCNCNEGIKTQLLEKKYSLVVENVPHATPDIELSDIDDSIPPVKEYKRNPRPVVEDNYRVDIIGMMALLDAPQYAGEWPQIGQVVSVDTDSVDVHWYRGSKLSSWKPCKKKFKRFKRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT02</accession>
    <name>A0ABV2AT02_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004328</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003773">
        <property type="protein sequence ID" value="MES1922805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044713">
        <property type="entry name" value="DNJA1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43888">
        <property type="entry name" value="DNAJ-LIKE-2, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="22"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17347" checksum="74C72CBD651E0026" modified="2025-10-08" version="1">MFFDGFDLGSGRREQEKVENEELYNTLGVGKNATNSEIKKAYRQLAKKHHPDKGGDENQFKKIQLAFEVLNDKEKRIIYDKYGEAGLRNEAESSGMTDIFDLFGGRGRNRVRKGKDSAFDLNVTLEDIYNQSTKKLKFSKNAICEKCKGFSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT57</accession>
    <name>A0ABV2AT57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004182</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003362">
        <property type="protein sequence ID" value="MES1922664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6230" checksum="F50A775F1C76452B" modified="2025-10-08" version="1" fragment="single">WLSSTQPDPPLHVMLGHKSRFGGGCFKPKDVNLGTMADPSWAHGSQNGSVQPLMGLKGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT60</accession>
    <name>A0ABV2AT60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004097</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003145">
        <property type="protein sequence ID" value="MES1922583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="67"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12674" checksum="29C4D0EAA01C0442" modified="2025-10-08" version="1">MASIDFDIRIDVSPVDPYSKVSQEISLDRLLERQLITFEEYVDALDDTSSVPKAKLEEILARRELQMQEQQAMEQEAMMQEQATMEQDESMAAQQRIDEAMGQGGTQNAMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT92</accession>
    <name>A0ABV2AT92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004404</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003946">
        <property type="protein sequence ID" value="MES1922875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="21724" checksum="9F0000B4D70CF146" modified="2025-10-08" version="1">MRHILIASSPSKDSWFWLQVLQALDLIAAMRPSAIKAFAVGNERSPKKRMKLISEIIGALKAAEQPLLSQLKSFLTKLCGGETLNPLSLAPQMNMSPGEAESVGLFSARMAARELPVAVALLKPGEEVDRLCVVMDVLTSFSRSFASEDVFVTGFCLSMYFFNVVEVLFNFFAMYFFNVVEVLFNFVCDVLFQCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA8</accession>
    <name>A0ABV2ATA8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">F5/8 type C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003821">
        <property type="protein sequence ID" value="MES1922824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.260">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22633">
        <property type="entry name" value="F5_F8_type_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="107" mass="12908" checksum="B6CA7746062E1212" modified="2025-10-08" version="1">MILHVYTELSYLRRYFFYFILAENLSRKNSTIVSQSSTYLTRYANYSNDGKHGTTENECSHTGIGHKKAWFQVDLKEEYSLKSITITYRDEGKKYSYIYTYRYVYRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC4</accession>
    <name>A0ABV2ATC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MutS protein msh4</fullName>
            <ecNumber evidence="1">6.5.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">MSH4_3</name>
        <name evidence="1" type="ORF">MHBO_004161</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.3" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003311">
        <property type="protein sequence ID" value="MES1922642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003972">
        <property type="term" value="F:RNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.110">
        <property type="entry name" value="MutS, connector domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036678">
        <property type="entry name" value="MutS_con_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13682" checksum="7C1A66532AEA3FD4" modified="2025-10-08" version="1">MNKTKIDRSEVGFAAMNTQSTELAMYQFRDTNSYHRTFSLLFQYDPVEVLNSKEKILVPDLAQNTVLKHKISKNFNFSQVKAIQRKYFGEDAGIRLLKSVCTLQSISRTSLDSSMFTKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI5</accession>
    <name>A0ABV2ATI5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004444</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004027">
        <property type="protein sequence ID" value="MES1922914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8347" checksum="64E53502BDDE9DE6" modified="2025-10-08" version="1" fragment="single">FSGKRLSLGSALINYIAMDSVQTYDYNISYLGLNKELDLMVSGLEFEEVLAEVGKQLSIQGKDVALVLLMANGKPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATJ2</accession>
    <name>A0ABV2ATJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004518</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004252">
        <property type="protein sequence ID" value="MES1922986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="22386" checksum="300829DC61565A95" modified="2025-10-08" version="1" fragment="single">SYYYNGIRKNFPPPPPLNATQFGNHSKINKANLKNSNVAKFDIFNMGKFEKPGAMHTSDFEKPVQKEEIAQFEERVDKIRNSAKEILNLVPGINKEMVEKLENEIYNSNFNRCNFWYDNIDLHKFDPKLESEEIFEKKDEILLNVVIKSNPYTRTINMLLQRLNKFKHFRYQIINQIIPVQKVPNLTYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW5</accession>
    <name>A0ABV2ATW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004642</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004677">
        <property type="protein sequence ID" value="MES1923101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="21476" checksum="94C2FEE887D77B4D" modified="2025-10-08" version="1" fragment="single">DGQTAVNYANSKSPKLQKFLNFCIKNEHGKDEDRNETDNTDHFANNSEDEKAQKTTYNKILSPNKKSESNVDGNGETSQPERTASANNRIFNLEEDDPLVPLELFGDGESILIGNDDNVYKPGEEKLASKREISATDILANAKPREANAEIENPKSNFRSFYSSSIPDESIRQKYVAPKMSANAYGNRGILNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU80</accession>
    <name>A0ABV2AU80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004558</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004399">
        <property type="protein sequence ID" value="MES1923024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="111"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19619" checksum="72D92E32EE5CFDB3" modified="2025-10-08" version="1">MLKSVKRLMMIKGPKTYQEILLDISNDVDWNFNVYPDQSTINELQKYLTNGIVEDSKVPTFLSKRVTDIESKSDTFETEFDASSIKANTLHIEMCEANDRNMVFVKLTEKLMESKALLDAAMENLKEVYQNLQKTDANKSLGDALKNFTESMITYHEKKTPENYLMEYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC0</accession>
    <name>A0ABV2AUC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004805</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005351">
        <property type="protein sequence ID" value="MES1923260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11541" checksum="96DE705880289083" modified="2025-10-08" version="1">MVPPNTTVYVTSTQTSSTEIECTVSLTQQENYTTVSDTLLMKSTEPPGNELTCKFRVQRELHGFRKSEYIYCHHCRISLFSNFDFSGKIWTVQTFVDIVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH2</accession>
    <name>A0ABV2AUH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004887</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005642">
        <property type="protein sequence ID" value="MES1923330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7147" checksum="4FA2FD2D0F76C54E" modified="2025-10-08" version="1" fragment="single">EKVEGKDYWNEEAQEWTTSLLTRKKPYLGWIIKDIDVSPDVFQDGTSIYSDWAAPVDKPNDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ0</accession>
    <name>A0ABV2AUJ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">EGF-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004635</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004646">
        <property type="protein sequence ID" value="MES1923096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00054">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.25.10">
        <property type="entry name" value="Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.300.10">
        <property type="entry name" value="Tie2 ligand-binding domain superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001881">
        <property type="entry name" value="EGF-like_Ca-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000152">
        <property type="entry name" value="EGF-type_Asp/Asn_hydroxyl_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018097">
        <property type="entry name" value="EGF_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049883">
        <property type="entry name" value="NOTCH1_EGF-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07645">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00181">
        <property type="entry name" value="EGF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00179">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57196">
        <property type="entry name" value="EGF/Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00010">
        <property type="entry name" value="ASX_HYDROXYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01186">
        <property type="entry name" value="EGF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50026">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01187">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1 3" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EGF-like" evidence="4">
        <location>
            <begin position="52"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="11895" checksum="EBB57195052C24C0" modified="2025-10-08" version="1">MFLFHLACENGFYGMNCSDECSCSALNTDFCNKVTGLCNCKEGWNETNCTVDVDECSNADACPENSNCINSNGSYACICQVGYVLADDKCIGNMHNISFSSKNVSFVYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL5</accession>
    <name>A0ABV2AUL5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004924</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005816">
        <property type="protein sequence ID" value="MES1923359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="9517" checksum="4A48D9C39AD1D03A" modified="2025-10-08" version="1">MQRETKPIIVYDWQLDNNGEAVLFDDGFEIIQVSDDVPAYTETIATVSHNSTCFQVIDKCPKPARVDTNTDQALSDALSAAVADIGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT8</accession>
    <name>A0ABV2AUT8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004984</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006101">
        <property type="protein sequence ID" value="MES1923417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050361">
        <property type="entry name" value="MPP/UQCRC_Complex"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11851:SF149">
        <property type="entry name" value="GH01077P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11851">
        <property type="entry name" value="METALLOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12090" checksum="E7FDDF286BC1CE7F" modified="2025-10-08" version="1">MRALCELSDNVTDQQVEEVRNKLVTAALSPIDSTDELCEELGRQVLTCGRKMPAAEFVARLNAVDASAVRLAAKRFIYDKDLSLSAVGPIVELPPYPWFRRHTYSLTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU3</accession>
    <name>A0ABV2AUU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005001</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006169">
        <property type="protein sequence ID" value="MES1923430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="17965" checksum="A77BD74E3309D665" modified="2025-10-08" version="1" fragment="single">QPARLAAIAVPERFAEKLYISGLKPSTKYTPEERHQLFQTAVKYDIPVSESGAMKGSDIRKKLGEQVSGIIAEGQARGETINREAVSASLEDLFDTYEKYEALPERGQRAVLSALDEFNRSKGTNIPVAEAQTMKQGVQRKLATKKAYGKMATPLDEAQKHLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW1</accession>
    <name>A0ABV2AUW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004773</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005208">
        <property type="protein sequence ID" value="MES1923231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8640" checksum="3C3B94C5C56A242D" modified="2025-10-08" version="1">MLHYPCVERHCRKAGDELHIPMKNVFPVSNYHDEGSTTPTKNAMALNVLWKIVGLCINHIENHQYKGDVLDGFYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV31</accession>
    <name>A0ABV2AV31_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lysocardiolipin acyltransferase 1</fullName>
            <ecNumber evidence="5">2.3.1.51</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">LCLAT1</name>
        <name evidence="5" type="ORF">MHBO_005109</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.51" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010006647">
        <property type="protein sequence ID" value="MES1923525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003841">
        <property type="term" value="F:1-acylglycerol-3-phosphate O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032098">
        <property type="entry name" value="Acyltransf_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10983">
        <property type="entry name" value="1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10983:SF16">
        <property type="entry name" value="LYSOCARDIOLIPIN ACYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16076">
        <property type="entry name" value="Acyltransf_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Acyltransferase C-terminal" evidence="4">
        <location>
            <begin position="20"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15301" checksum="22315C66F9D4FF7C" modified="2025-10-08" version="1">MYYPYPIPFTQLIFFPASNSPRDVHVLIKKYEIADVPKKEEELRKWTMDRFLEKEKQIEYFKRNRKFLDGNSFSEHQKSKLTSFVVLSFLSIVSLRMTGLISQNFVKFWLLMVFMTIAESAQNFLTKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV53</accession>
    <name>A0ABV2AV53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">G protein subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">STE4_2</name>
        <name evidence="2" type="ORF">MHBO_004876</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005614">
        <property type="protein sequence ID" value="MES1923321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016346">
        <property type="entry name" value="G-protein_beta_1-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19850">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25391">
        <property type="entry name" value="WD40_Gbeta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="36"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="122"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="16812" checksum="E532C3034F5AF13B" modified="2025-10-08" version="1">MSVAIKKSSNIFVTGSCDANSKIFDVRAGKNSVATFAGHESDINSVCFFNDINCIGTGSDDSSCRLYDMRSMQQLNRYVSDNILCGITSVVPSRGGKYLFAGYDDYNVYAWDVLSGEPAMTTTAHENRVSCIDINRDGLALATGSWDTFVKIWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV56</accession>
    <name>A0ABV2AV56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Down syndrome cell adhesion molecule-like protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DSCAML1</name>
        <name evidence="2" type="ORF">MHBO_005145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006866">
        <property type="protein sequence ID" value="MES1923553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007110">
        <property type="entry name" value="Ig-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036179">
        <property type="entry name" value="Ig-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003599">
        <property type="entry name" value="Ig_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003598">
        <property type="entry name" value="Ig_sub2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13895">
        <property type="entry name" value="Ig_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00409">
        <property type="entry name" value="IG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00408">
        <property type="entry name" value="IGc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48726">
        <property type="entry name" value="Immunoglobulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50835">
        <property type="entry name" value="IG_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ig-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11404" checksum="CB6228632690087B" modified="2025-10-08" version="1">MPPEEMVCRGVTVRIQCTGIPVTSQDVRWFKDGVPIPTNSSEKSVLCLEDLELSDGGKYRCEITQSSGAKISSNEVDISIKGWKCHFLNTDNFPPKLFKKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV59</accession>
    <name>A0ABV2AV59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inactive tyrosine-protein kinase transmembrane receptor ror1</fullName>
            <ecNumber evidence="2">2.7.10.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ROR1</name>
        <name evidence="2" type="ORF">MHBO_004819</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.10.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010005398">
        <property type="protein sequence ID" value="MES1923273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007110">
        <property type="entry name" value="Ig-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036179">
        <property type="entry name" value="Ig-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013098">
        <property type="entry name" value="Ig_I-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07679">
        <property type="entry name" value="I-set"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48726">
        <property type="entry name" value="Immunoglobulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50835">
        <property type="entry name" value="IG_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0675">Receptor</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <feature type="domain" description="Ig-like" evidence="1">
        <location>
            <begin position="25"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11270" checksum="56912841F25C2877" modified="2025-10-08" version="1">MDKYQTYVVLIATVATEWPIRNWIWKKDDVIINDRNWKFQENEPSIRERTLTITKLSDEDCGRYSCVAETVAGNGESEQIQLKEGMIFKMAHVLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB1</accession>
    <name>A0ABV2AVB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006003">
        <property type="protein sequence ID" value="MES1923399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="7666" checksum="A716724609943004" modified="2025-10-08" version="1" fragment="single">VVELAAVGGGVDVGLPTARDEVVLEVEDSVVTVVVLGLFVKVAVETLVVDLAALVVETSVVGDVRDLRGVLEPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE1</accession>
    <name>A0ABV2AVE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007389">
        <property type="protein sequence ID" value="MES1923643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18509" checksum="C2B3318676399A0C" modified="2025-10-08" version="1" fragment="single">RTMKQMLVMSNILVHASIYLTDEIDVLRTVNFASSGTAIFNLVQCEYVEQPDSETLEKHCIFLLRSINTVFFGRMTTIVQGMAEKIRHNLLNGSYLFDWLILDPNEDPSSFVFGLNLENDLYIYDNTFQPFVISNTDDREHSVGPINAKFNMKVRIFGKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF5</accession>
    <name>A0ABV2AVF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005273</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007473">
        <property type="protein sequence ID" value="MES1923655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.228.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013035">
        <property type="entry name" value="PEP_carboxykinase_C"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="6347" checksum="B00FFB9F7E040F6A" modified="2025-10-08" version="1">MDYLMSVNKNEWKTEVARYREFYKSFDKGKMPEQLTKHLDDLEKAMKSDDKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE58</accession>
    <name>A0ABV2AE58_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000051</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045767723" evidence="1">
        <location>
            <begin position="19"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6922" checksum="31C8FC23206E382D" modified="2025-10-08" version="1">MFFIFKCLLCVAASDGCGEFKEEGYRILFCDENNPNVCAVGCDEEYYPAGTFLTKRNFAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE69</accession>
    <name>A0ABV2AE69_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mitochondrial import inner membrane translocase subunit TIM50</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000023</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the TIM23 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TIM50 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07521">
        <property type="entry name" value="HAD_FCP1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004274">
        <property type="entry name" value="FCP1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050365">
        <property type="entry name" value="TIM50"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12210">
        <property type="entry name" value="DULLARD PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03031">
        <property type="entry name" value="NIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00577">
        <property type="entry name" value="CPDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50969">
        <property type="entry name" value="FCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="1" id="KW-0811">Translocation</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="FCP1 homology" evidence="2">
        <location>
            <begin position="37"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1917987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="26161" checksum="E3748190D7C79480" modified="2025-10-08" version="1">MATKFTNSVFLLKKIKHKSNKNKEKFLYQVKKNLFVNNFERKILVLDLDNTLVHTSLTENISRKHDFSIYMETLDAPFYVYKRPGLEYFLENLSNKYAIYLFTASLKQYADKVIANLKNKNRFSKRFYREHCSAYDGFLWKDLSRIGCGTANSMIIDDKEQIGNGILIKEWTFDLKNDQSLYKLLVALNIYAESDNLYNLFKGKMVAEKEALKKITVLGEGIVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER1</accession>
    <name>A0ABV2AER1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphatidylinositol transfer protein N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000162</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001666">
        <property type="entry name" value="PI_transfer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055261">
        <property type="entry name" value="PI_transfer_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10658">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL TRANSFER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10658:SF11">
        <property type="entry name" value="VIBRATOR, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02121">
        <property type="entry name" value="IP_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00391">
        <property type="entry name" value="PITRANSFER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phosphatidylinositol transfer protein N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12192" checksum="D7D489806F275878" modified="2025-10-08" version="1">MRTVLFKIPLPMTVDEYNIAQLYMVLKRSERDTIDGEGVKVLKNEPFENEEHGKGQFTEKCIYISKKIPSFAKKLFPSLNSTRTLESSYNCYPYCFTEYKTVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AES5</accession>
    <name>A0ABV2AES5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Small ribosomal subunit protein mS29</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_000003</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the mitochondrion-specific ribosomal protein mS29 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019368">
        <property type="entry name" value="Ribosomal_mS29"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12810">
        <property type="entry name" value="MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12810:SF0">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN MS29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10236">
        <property type="entry name" value="DAP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="246"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="256"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1917964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="483" mass="55264" checksum="A5E90656AB533BBD" modified="2025-10-08" version="1">MFASQKKWNRALNNSLITFNSKSMSAKSLPETRLTNRIFPIANKALIERKNLLGKIGFPKKFLSKNTELIEKLFEDASRLYTYTQNPENKEKLAPILTSEHASTDAGKVFLFNREMISGEFGGKIEKILARNGFPAILLREHMLSLSEKLRSAGNYSKTVFLSGSKGSGKSLSLNYLGMFALEHNWLWINFPFAEKISNYSGQIMRAKEREETFYQVEVARTFFRDILHTQAEKLKTENLKKEYKSNFVPEEKEESESQNKDEEKSETELSPEDYEKMVEQQEKSLKAEISEDKERQKAAEKLKENIKEHLSLDRETGFNGGASNSLYDMASFGAGNSCVNPAELLYDFLEEISQCENLKVLVTIDNVDFWTGMSTFRDPDFKKLEAEQLSVVDAFTPFIYDNSLKNGLTVIANSNRKKDYSPPDSAETFQIPETYSKEEFEKWTEHLQNVGVLQNSDTKTIKRLEVLSNKNPNEVSKLASLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEU3</accession>
    <name>A0ABV2AEU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000209</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000027">
        <property type="protein sequence ID" value="MES1918205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8124" checksum="5FD4A244DE35725B" modified="2025-10-08" version="1">MKPSVGVSDALLSFGYESLKEMCPVVDSTLSETNGVCIKTVKAVRNKRKSKVILGSSLAAASLVIVGVCWALYHYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEY8</accession>
    <name>A0ABV2AEY8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">VLRF1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000227</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="10">The VLRF1 domain mediates binding to the 60S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the ANKZF1/VMS1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047139">
        <property type="entry name" value="ANKZ1/VMS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041175">
        <property type="entry name" value="VLRF1/Vms1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16036">
        <property type="entry name" value="ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16036:SF2">
        <property type="entry name" value="TRNA ENDONUCLEASE ANKZF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18826">
        <property type="entry name" value="bVLRF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52044">
        <property type="entry name" value="VLRF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 10" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 10" id="KW-0540">Nuclease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="VLRF1" evidence="11">
        <location>
            <begin position="57"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS52044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="23570" checksum="1E2EABE4F1BE34FF" modified="2025-10-08" version="1" fragment="single">KNQKCVENCLKSDFRFYGETENDMILINNSKNHKLIIRKEIYKMGTENQIFSIKNLKEKSLLFVICIGGKFAAAIFRNGVAVEHTTLSRYVIRQKQGGRQISIESKHSAGSHMRLYHEKRLGEDIHAIFKKWQNFVLNLDLIYVHAPGKINSGHVFGPDGVLLNLQDGRISKFPLVPQKATFGDILAAEKKTSFVEWVSPKGCCDEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF49</accession>
    <name>A0ABV2AF49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Anaphase-promoting complex subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000298</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the APC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000040">
        <property type="protein sequence ID" value="MES1918311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024990">
        <property type="entry name" value="Apc1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12827:SF3">
        <property type="entry name" value="ANAPHASE-PROMOTING COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12827">
        <property type="entry name" value="MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0498">Mitosis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1597" mass="181924" checksum="95CCE89D8D5833FC" modified="2025-10-08" version="1">MPDIRLKCVKVIGEKGNSNDSFCKILETPFAQGQKTLCENSRIKIFKNGVEIKTIHIKCIEQVLWSTFSTLDKSRVRMLCVLASGFVRIFNIDSNLEYFCPIPFLIKSIFALPDGILVERAVEISGEDRYYSLTHPLGECKKIGQIGTKNLNKEQVIFTSLFKPIVVTMARDYKHRVYFLRRTTREVQRRLSLGKNLLRTPNPNRKTNKSFKKTLKSLKTPKMKSKSDFVYKKRFSGIFTPERRNSKLKSNVSAKNASNPENRIEALFDFKFELPLNFNRKASFSAFEVSANFEAIAQNPIFKFEALSVVPVKSIYSFYDGKQQFQNFREKTLLEDCVEEQFYDDFYCNNDLLCLNLSNEMILHSSKTQIARVLLNKAEREKVCFIEKEASNILVTTSSGRKVSTEFEPIINEKATTICLRTISTVVTKKKFLSFLKKFLAGERAPDQSEFDAFINFCVKEIEGNSERKPKKDWCRILRALHCFYESLKLDLNQKESYKVAELLTNISLQLGQFGYTDIYFRDFASLLKRYIAIRNNKIGGQKIAESAPFDFYKWLSAKIERKPSQILKNAPLLNPNCSFLERLRKICLFVEVVFALLDLKEIESEFSFETSFGKSGSAVKLAKTFKKSKSGHLIFSPLRFYKEEKNRKTAETVSTMLRGITTDDFVGLPDAISLILRDILAKILFSQNTKSADLWKIAGREDIALNIIDSAKNGLAKTSAANNNRNCPSCAKKDDGNDKTTISTICANWRKTRFTKDLRLKEVERCLCSSKPQIVAINCTDEEETVLENWKRKDISVPYKYFQRTCAMPLGRALFLFDENETFSNKCPSHRKLSSDQISTSLRIKGSSKEFEIPVDSRASKIAKSMGEFHSGAAFALSLPENMPFLGRNEILGFPKESLHAHSGFLLGIGAKGYLSSLDSTDLFDYFQSQKEVVSVALLLGFSLRAVGSMDFEITKMVSLHVPNLMPSTLMESEKTVPSLLQSVAILCLGLLYMSSGNTSMNKVILEIITKSKNDGEEEDLGQLHLSSSLAYGLVNLGKGCEENGNCCNVDAMFLQDSNGGTKKVDSNSDSLDFIDDDFEPMDAETEGKYIKTSLTHSGTKIDLFVTAPGSLLALGFIHYKTNNSLIGKLLEIKNSANFIDNYRGEFAFYRLLSRNIVMWNDIQPTVKWLKQNIPPILRKKSRFYRFVKGDKTTIKFEETVGTNRDSFCLYSLLGCCTALAIKFCGSRDARVLGLLMQMYNKALSSRERQNLKVPESCFKSFVVGMATNMAVVMAGSCDLSVFKILRRLRKISNNLNSSENELVSMAIGFLFMGGGRTSLTSSDKGTAGLLISILPLLISRSFLMTDVYPPFFRYLWILAADKRHFETIDSETGQLCNTVIEIDRTDKKGKIKLLTPCLLPERREIKRIKIVDKSFWPQNELLNENNASSIFVKRKFSSEKEKLFEVLTEKSFSPDFGFDERIRNEMKKLLKQIRKYDVSSSKFNELNLLMSYKNSKMENFEKNDELVSAIKIFYGFENKGELKESDCKILCGYVSYYNLPLPVQIRTKNLDKTFWKQLSKSSSELEQLALINYFFRDQSYRDLREIAFILQNIKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF51</accession>
    <name>A0ABV2AF51_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005298</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000041">
        <property type="protein sequence ID" value="MES1918321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13027" checksum="A793C49219590779" modified="2025-10-08" version="1">MATTSKGNDHQHRMQISNNYKTLVLLKKKSSKKFVLQFVYTLFTSIYLIQFSNTLSSDLSFLASFMLQSLVLKIYLKRYSKHLFRFFVLLSVLTIILLFSAFFRVLPKLLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE7</accession>
    <name>A0ABV2AFE7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">RanBP2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000185</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000024">
        <property type="protein sequence ID" value="MES1918174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12885">
        <property type="entry name" value="SPRY_RanBP_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.380">
        <property type="entry name" value="Zn-finger domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001870">
        <property type="entry name" value="B30.2/SPRY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043136">
        <property type="entry name" value="B30.2/SPRY_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044736">
        <property type="entry name" value="Gid1/RanBPM/SPLA_SPRY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003877">
        <property type="entry name" value="SPRY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001876">
        <property type="entry name" value="Znf_RanBP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036443">
        <property type="entry name" value="Znf_RanBP2_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00622">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00449">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00547">
        <property type="entry name" value="ZnF_RBZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90209">
        <property type="entry name" value="Ran binding protein zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50188">
        <property type="entry name" value="B302_SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01358">
        <property type="entry name" value="ZF_RANBP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50199">
        <property type="entry name" value="ZF_RANBP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RanBP2-type" evidence="7">
        <location>
            <begin position="200"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="B30.2/SPRY" evidence="6">
        <location>
            <begin position="324"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="611"/>
            <end position="637"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="673"/>
            <end position="696"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="675"/>
            <end position="689"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="696"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="696" mass="79851" checksum="2E4A611B7E8C804C" modified="2025-10-08" version="1" fragment="single">MEKIGNLSIEKNKTDENHQFHIKSGAVAQKLIFEYIVFVRSMICNNKWKSVIINFLVTKLEQIPKLVDYQKKELKEKVDLTKFRMAMASLAILGGHTNVFRIGCRVENINSKSNNEKGTLLEINRLAGTCKIIFDSNRNRIIENFEIKKLRPFSEIDLNFSENEKFLKTILAILKNLLDSGEDLEQMKISITRGKSQKRKIQKWSCATCTFINEKHSEMCSMCSSMRPKMADFEDKNKNGDVVDENSKSQISENRFLFCRLRSSAIKSICKLLSKMGTEAFLDASKGFLPVFVKTAMHSTKLNEYISLEYLEAIQTRILELIFENENSFGKVEKIDDLIPFSPFKNLQAKLPTHIDAEYSKKCNFEKFSKLRRLSASQKTSENAICYCRANQLIPKSLKHFYFEAKIIQISENRDFGVAIGLYVEGAELKGKPGNEFSYSYCASTNQIVHDNKSIHVGDNDLRAKDIIGCGYDIIKKSIYFTKNGEKLNRTFEGANSRYYPFLWIESSNTHIEVNFGHEKFAFDFESTLSPEYLQTLRSKKKGRSAAEQKRREMAESLVEIMGHFPIELCEMALEKENDDMQHAVTWLLDRGWRELEKMGDALLKRTRPSFAAERKNRSDSEESLEEEIVSSHDDSSFSAGFSAAEMYLRGEEELTVPVGLNEEEIVRTLSVNRRRSERENAGEDKCADDCAEVGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFF9</accession>
    <name>A0ABV2AFF9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Activator of basal transcription 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000391</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039119">
        <property type="entry name" value="ABT1/Esf2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12311">
        <property type="entry name" value="ACTIVATOR OF BASAL TRANSCRIPTION 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12311:SF7">
        <property type="entry name" value="ACTIVATOR OF BASAL TRANSCRIPTION 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="150" mass="17957" checksum="86ADE9337CA194A0" modified="2025-10-08" version="1">MSIRKRKKFENGWIEFADKNVAKNVANSLNKTKMGGSVKNKYREDLWNLKFLPGFKWHHLTEQIQYEQEIKELKMREAAREAEAEEKFYLKRVSQNNFLNKMAEENKEIDKTKNRIVNRTFRQSKSFNKTQKRSSTNVQIGNLRKILMIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK3</accession>
    <name>A0ABV2AFK3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">phosphoinositide phospholipase C</fullName>
            <ecNumber evidence="1">3.1.4.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PLCD4</name>
        <name evidence="7" type="ORF">MHBO_000225</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.11" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000029">
        <property type="protein sequence ID" value="MES1918224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004435">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001192">
        <property type="entry name" value="PI-PLC_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10336:SF36">
        <property type="entry name" value="1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE BETA-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10336">
        <property type="entry name" value="PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="254"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="17"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="28"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="88"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="345" mass="40317" checksum="0A39C397284B21E0" modified="2025-10-08" version="1">MILKDLWNDCCSCYNNKQVSKSTKSKPIKIDKKAESTKSKSKIKIEKKAESTKSKSKIKIEKKAESTKSKSKIKIEKKAENEMIPTQETKKSLKMAKESTPSKRKVGEFKEGVNSPSSSIKTLSSISSFSFFKDSYDEKLQNGLESCLKGDKIEKLNRNLLPQKRVLYLSKKYDILYWGRFKSQSNSNIHITEIKRVYRLYDTKLLKDRKIEGVFSVVTNKRILYFDCLKRSRRNKWVAILQWCIDNIKTKGALDLLLLREEWNVFDENNDGKLVFKEVKKLLESLNVKFDYDEIIGMMKDISNGDFLTFEQFVELKKKLVCRYEFIDLFENYSDSSSKMSIKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX0</accession>
    <name>A0ABV2AFX0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Importin subunit beta-1/Transportin-1-like TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000538</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000090">
        <property type="protein sequence ID" value="MES1918591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058584">
        <property type="entry name" value="IMB1_TNPO1-like_TPR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040122">
        <property type="entry name" value="Importin_beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10527">
        <property type="entry name" value="IMPORTIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13513">
        <property type="entry name" value="HEAT_EZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25574">
        <property type="entry name" value="TPR_IMB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Importin subunit beta-1/Transportin-1-like TPR repeats" evidence="6">
        <location>
            <begin position="362"/>
            <end position="736"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF25574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="769" mass="84618" checksum="F15D9C2222A4479F" modified="2025-10-08" version="1">MLNSKNQTSRSVSALVVSKIASVEMPFDNWPNLVQNLIKMASAPISANNSEQENAISANASEGAFKTIGYLCEEVPDHMEKHANAIFELSVEALRSKLPPFVKSLVLQMIYQALFFSQDVLSNDRGRVVVTNAVFECLRGEDENMSVAAFEFFTRFSEVHYRFLSESISDVLKETARVLRNSSTPQSVVLRALDFWATLSEYETELQAPVEAVFTRKEDSKNYIARSLPGVVPLLLEQMTRQTEENFEEDAVNGASASSACLQLVSRCAKDELAPLLVPFLRSHLRSNDWRQAEAAVCAVGVLMEGPGKETLAPIVSDCYNVILSFCASDNAFLRDTATWTLARICKTFGAQMVNSDRLALLLQTAIKGLKDRPKIAANCCWCLHSIASATAENQPSLGANALTPFFQNLVQALLETSKRPDSGEHQLLFCCYETVNQIVLSAAEQSKNDVLKLAALFTADLKRSLSASVDHAIQISNLQAVLVGSISSVIKVMAEDDVLERVDDIMKVLFVVLNSRDKTIFEEVLLAIGAVITKIKSKMSHFVSELKPFLMSGLGNSLGPDACQVSIGVVGDVFRAMGNALYQNKMADDFVQALIKTLQNPSVERRVKPSVIVCFGDIALSLNENFGRYFSHVMSLLERVAKMQLAGNSYADIEFSNSLRSALFETFSMILHSVRAIEPKQKFFQFIAPIVDLVDKVVNDDEKSPEVVSSALALIGDMADILKETLAPLSANQSVRKLFEIGNSAQNESVKQSLKWALIASNNMSFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGL3</accession>
    <name>A0ABV2AGL3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AP-1 adaptor complex mu subunit Apm1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">apm1</name>
        <name evidence="5" type="ORF">MHBO_000731</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000135">
        <property type="protein sequence ID" value="MES1918831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050431">
        <property type="entry name" value="Adaptor_comp_med_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022775">
        <property type="entry name" value="AP_mu_sigma_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001392">
        <property type="entry name" value="Clathrin_mu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10529">
        <property type="entry name" value="AP COMPLEX SUBUNIT MU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01217">
        <property type="entry name" value="Clat_adaptor_s"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00314">
        <property type="entry name" value="CLATHRINADPT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AP complex mu/sigma subunit" evidence="4">
        <location>
            <begin position="1"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15759" checksum="F6E455D0A307B187" modified="2025-10-08" version="1">MSAIFILDQNGKPIIQRNYKGDVPLSAAKAFEEFLEEADDYLKPPVFSRNGLHYLFISHNNLYLLVISNQDDNVMMLVSFLNETVSVLEDYFNKLTEESLRKNFVLVYEILDEMMDFGYPQTTQAKVLKEFLFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW5</accession>
    <name>A0ABV2AGW5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="3">PPIase</shortName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CYN11</name>
        <name evidence="5" type="ORF">MHBO_000647</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000114">
        <property type="protein sequence ID" value="MES1918729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024936">
        <property type="entry name" value="Cyclophilin-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020892">
        <property type="entry name" value="Cyclophilin-type_PPIase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071:SF561">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001467">
        <property type="entry name" value="Peptidylpro_ismrse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00170">
        <property type="entry name" value="CSA_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="4">
        <location>
            <begin position="19"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="20392" checksum="F5E29AA98485AD96" modified="2025-10-08" version="1">MTILSDRYELTHTENPVVFFDIKIGDHEAGRIVVELFKNSVPKTAENFRQFCVGKMKLHGEPVGYKKTFFHRVIKGFMIQGGDFINNDGTGSLSIYGSNFADESFENKHTNSGLLSMANSGKDSNGCQFFITCDRANWLDNKHVVFGRVVSGMLTVRKIENIPVDSSNRPKIDCVIVECGEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX1</accession>
    <name>A0ABV2AGX1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GB1/RHD3-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000805</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3 GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000154">
        <property type="protein sequence ID" value="MES1918915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030386">
        <property type="entry name" value="G_GB1_RHD3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036543">
        <property type="entry name" value="Guanylate-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015894">
        <property type="entry name" value="Guanylate-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10751">
        <property type="entry name" value="GUANYLATE BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02263">
        <property type="entry name" value="GBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48340">
        <property type="entry name" value="Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51715">
        <property type="entry name" value="G_GB1_RHD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045650251" description="GB1/RHD3-type G domain-containing protein" evidence="6">
        <location>
            <begin position="19"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="635"/>
            <end position="651"/>
        </location>
    </feature>
    <feature type="domain" description="GB1/RHD3-type G" evidence="7">
        <location>
            <begin position="49"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="653" mass="75466" checksum="B03D7454B93F6FD6" modified="2025-10-08" version="1">MDLVFALMICSLVSFGHARSFQIIHQEKNGEIKLNHSGLDEIRLRAAKYDHVKVISVIGPYRTGKSFLLNILRNGINFELNGLKAKEENFQVGSTVQPCTLGVWAQPEIIDGKFFLFLDTTGLFSPATSEQSDARLLAIISLLSSKIIYNHFGVIDASEISRFSFIVRYTKSISGVLSQRKNAETVTELRPDLLWLSRDFYLDLKDDRGRNISATEWLKSVLGRVQFGKELNKLFYKIKAFTLPFPSKNVENLKNLDEDKLSDEFKSNFEKLRNEVILNSKDKIVNGKKLSMAALTNFVEVYSLALNEESAFSTLTTVNSLLSLVKERLLRRALEGIEKAFKQIVLPVPKEHLRKEASKIQKKFSDFVRSESFGETEEHFENRLENILSKRFIDIYVGFSRKNEMATQEYVNSYIDLLVEDYRAHFDPNAFPIRRERLLSESEKRFEVTNKKFVEKIGEKMGSSFDFEDGLDKLESKLKKSEKILIGANQKSVLEKCEKLNTEFLGEHFSEEKIEKFYDMGDFEGKTKKFLQILSEKCFSEKRQKEFIRQFYTSDVTERVKNNIERAEKWHRKVVFACFLMFAASFVMPLVYLKFSCFGIFVVTGALLHTKYPLLTKKYGFWKFFEVVFVEGKNLVISLFSSIFALLKIFASE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH03</accession>
    <name>A0ABV2AH03_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000165">
        <property type="protein sequence ID" value="MES1918956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="9736" checksum="B14929654B2D0609" modified="2025-10-08" version="1">MFHVIETGVQNSPSIPDEHSEMVFFPKERPVFSTVPSKDFYALASGLAKQSKAVGKSSEVRAKTNLFKFNKNAKEFIPRDRRFASK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH95</accession>
    <name>A0ABV2AH95_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">5'-AMP-activated protein kinase subunit beta-2</fullName>
            <ecNumber evidence="3">2.4.1.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PRKAB2</name>
        <name evidence="3" type="ORF">MHBO_000912</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'-AMP-activated protein kinase beta subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.21" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000183">
        <property type="protein sequence ID" value="MES1919035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009011">
        <property type="term" value="F:alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.250.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006828">
        <property type="entry name" value="ASC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037256">
        <property type="entry name" value="ASC_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043554">
        <property type="entry name" value="KINB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46316">
        <property type="entry name" value="SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46316:SF2">
        <property type="entry name" value="SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04739">
        <property type="entry name" value="AMPKBI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01010">
        <property type="entry name" value="AMPKBI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160219">
        <property type="entry name" value="AMPKBI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Association with the SNF1 complex (ASC)" evidence="2">
        <location>
            <begin position="2"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10517" checksum="B3B92A4F6CD8BCA4" modified="2025-10-08" version="1">MKTECEYGQKFPDESLYKKEPPTLPPHLSYVLLNYPPHDILDPSTLPIPQHVTVNHGYTLVDESSGVKILAVTQRVKSKFVTTTFYKPVEADS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHA6</accession>
    <name>A0ABV2AHA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000951</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000194">
        <property type="protein sequence ID" value="MES1919083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050350">
        <property type="entry name" value="Compl-Cell_Adhes-Reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19325">
        <property type="entry name" value="COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19325:SF560">
        <property type="entry name" value="SUSHI, VON WILLEBRAND FACTOR TYPE A, EGF AND PENTRAXIN DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0768">Sushi</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047182914" evidence="2">
        <location>
            <begin position="19"/>
            <end position="989"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="989" mass="111908" checksum="BC8397626C85A88A" modified="2025-10-08" version="1">MLHLLFTFPFLVYINCLGDCEQFECNGASVGTTCSYPCGDSLITETCVFSESGVYELRGDQCTVCAVDMEKNENFVDSGGEACQNKLFLEDGESCEYLCERGYISKNKESEASGKQFDEDSRKGQSTCRNNILNPIPECIPKHCDLPESSPLSNMSENSCDEFLYLGRSCTYTCSSGHYSLSSIEHNTLSVTGKSECIETGSSIHLDIVPLCRKVCITKRIENNSILYKCGSFLSVGHSCDYLCTNKNSISIYSAINNDLSNKGVVRCTDSGLFDHIPSCHDNFCIIEDIYLESERVENTNCRKILTKNSRCSFRCTPQFISGNLKVNDEIVCDTNFLSNALACHKFCDFSDLKISHAKKSSCDNKILIESNQCEFECDDGFVPSLIKNKNFVYFNEKCFDYVFIDPGNGIFVCDGVEQTIYPECKRTCDLTTEKVEYTHTCNSILVEGETCEYECVEGYITKSSLETEDPTRKGIFECSNGINSQPECVAVCDFRNYRLELRNIDSLFCNTHLSPVTENECIYVCKNNFYTLPSIAMQSGETVGQIVCEKRKVEDLVTTHFVEPLCVRFCDLRKISIENVVTNNCNRLIQLNDFCEYSCERGYFPIDFFVDEDMSLFSERTEGKFIGKPKCILHNTDTILHMEPNCMPGCDLTIESEMPKCTSISNILNSCKSLISDQESCEYRCDEGWTIVTDEPIVSIQLNDKIECIYNNKWVATKQFKNSVKICDLRSLGKSSENGIEEGCDNILKEGQVCVFTCNEGHMFEKTETDFVKNGTFTCEFDEKNVYVTPKCTKVCQLNLFEEPSNLNKKTCSNILKIDEKCTYECENNRYPLSSVLNNNLQQKEGVVNCIDSGDTLLKPDITPKCVRVCDLRDVYIPFASHFSDCQKILQEEEVCQYTCEDGYVPNLDKIERMGEKTFDFIKSRDKGSLKCLFNDAKCIKICKITISKPKNIATNNCNGNTMIENTTCTFSCKNGFFSSKIYIFYFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK5</accession>
    <name>A0ABV2AHK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000212">
        <property type="protein sequence ID" value="MES1919156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9178" checksum="58E47F0A836C9197" modified="2025-10-08" version="1" fragment="single">MIDLLFSNYDEKGEITETAILGKILTRKLLKKLKFNGKLVFSENENEIIEFILSWTVFIDVFQILHKDLRSIVLSQFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU6</accession>
    <name>A0ABV2AHU6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001107</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000238">
        <property type="protein sequence ID" value="MES1919247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.10">
        <property type="entry name" value="RNA polymerase, RBP11-like subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00261">
        <property type="entry name" value="RNApol_arch_Rpo11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036603">
        <property type="entry name" value="RBP11-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009025">
        <property type="entry name" value="RBP11-like_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022905">
        <property type="entry name" value="Rpo11-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13946">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I,II,III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13946:SF16">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13656">
        <property type="entry name" value="RNA_pol_L_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55257">
        <property type="entry name" value="RBP11-like subunits of RNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="DNA-directed RNA polymerase RBP11-like dimerisation" evidence="4">
        <location>
            <begin position="2"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11570" checksum="F35D36AA7529B75B" modified="2025-10-08" version="1">MKEGHTFGNLITTELLNEKNVVFVGYKVPHPLKNEILIKIRTKTNFAPEKAFLWALKSIQKKVTSLENSFESELTRMTNELSQMENSNSIKDVAGATPFITE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI28</accession>
    <name>A0ABV2AI28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aminopeptidase 2 mitochondrial</fullName>
            <ecNumber evidence="2">3.4.11.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">APE2_1</name>
        <name evidence="2" type="ORF">MHBO_001188</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.2" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000259">
        <property type="protein sequence ID" value="MES1919339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016285">
        <property type="term" value="F:alanyl aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1730">
        <property type="entry name" value="tricorn interacting facor f3 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045357">
        <property type="entry name" value="Aminopeptidase_N-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042097">
        <property type="entry name" value="Aminopeptidase_N-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050344">
        <property type="entry name" value="Peptidase_M1_aminopeptidases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533">
        <property type="entry name" value="PROTEASE M1 ZINC METALLOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533:SF174">
        <property type="entry name" value="PUROMYCIN-SENSITIVE AMINOPEPTIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17900">
        <property type="entry name" value="Peptidase_M1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63737">
        <property type="entry name" value="Leukotriene A4 hydrolase N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminopeptidase N-like N-terminal" evidence="1">
        <location>
            <begin position="23"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="20966" checksum="92361E6A5E1B04ED" modified="2025-10-08" version="1">MMIKILNKMNKNKRIVLPSTIIPSKYRLSLIPNMTDFTYSGKVIVDLHAKQPVNQIKLHSADLEFKNVEFSQSDHNKKIDVSKISFDSAEETAEIPTTVSQGDGTLKIEFSGLINDQMKGFYRSTFKDATGKSRVVGCTQFEPIDARRAFPCWDEPVHKAKFDVDITVPQKYLVLSNMEGFFNAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI30</accession>
    <name>A0ABV2AI30_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001013</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000210">
        <property type="protein sequence ID" value="MES1919149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="14773" checksum="132C6EA0E595363C" modified="2025-10-08" version="1">MGYLIKKERDTAKANKEEKEENKKERADVYEKLNKIREEDRQTYKEEKVEWQKQLQINKEHMDKQQQHMNRQDDHMERQDSHIEKQDETMKEISNTLVKMQDRQEITDKKVDKILDKKVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB0</accession>
    <name>A0ABV2AIB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001232</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000275">
        <property type="protein sequence ID" value="MES1919393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF155">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE HERC1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00415">
        <property type="entry name" value="RCC1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="19"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="74"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="14142" checksum="ECF58FC67CBE767E" modified="2025-10-08" version="1" fragment="single">IEKISTKYLHSIALPGKADCAFLWGMNKTGQLGLGDNNVRAIPTKLVLGELKLIQADCGAGHSAFLAEDLNGKRRLFLSGNGRDGQLGRGDSIESVAAFRTNPLELVGPFSDCQVQKVSLGSDHSVCLCEVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX8</accession>
    <name>A0ABV2AIX8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001437</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000352">
        <property type="protein sequence ID" value="MES1919641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9547" checksum="14085E0C97D116B4" modified="2025-10-08" version="1">MKMEQNGTGIFELDAKKKKMRFGDNGENTFIRPKGIEIDSNKNGKSSKIEMAMNKNGKASIDFQFGNENFLKIGGDEEKLFVYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ43</accession>
    <name>A0ABV2AJ43_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphatidylinositol N-acetylglucosaminyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001443</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000355">
        <property type="protein sequence ID" value="MES1919647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013234">
        <property type="entry name" value="PIGA_GPI_anchor_biosynthesis"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45871">
        <property type="entry name" value="N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45871:SF1">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08288">
        <property type="entry name" value="PIGA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PIGA GPI anchor biosynthesis" evidence="3">
        <location>
            <begin position="49"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyl transferase family 1" evidence="2">
        <location>
            <begin position="195"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="397" mass="45072" checksum="2B36DF4ED2B376E9" modified="2025-10-08" version="1">MANKKLRICFVSDFFYPQFGGVETHIFCLSQQLIKMGHKVIVITGNIFKRRQGVRYMANGLKVYYLPMKRFYEHRIVGLVAVSGLPYFRDIVLREKIEIVHTHQINSMLGMECILHAKLMGLTVLLTSHSLYSPGALSVICSSYLYNSIYTHLDHIICVSKTCKENFVVNSIFDHTKISVIPNGIDSTRFKPDPSKRPNPKKKINVICIGRFYKRKGIELITGVIPLICAKYKNAHFIIVGDGPKKILVEEMRKKNQLNDRITIKPGIPFDKVRENLIEAHIFLNGSLTESFCMANLEAMSCGLHVVTTNVGGIPEVNPDDQFTMCSPNISSMESALSGVIDNFSVDEEKLHRIVGNRFNWQNVAERTLKTYVCAKSSTTAPFLERIKKFSNRRLFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ70</accession>
    <name>A0ABV2AJ70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001466</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000363">
        <property type="protein sequence ID" value="MES1919677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="24954" checksum="CB58EEC108B91B73" modified="2025-10-08" version="1">MHLQTRKHIENFLAKIEEKLMTNNKYKSLNKLKYFKEEIDNVIKQECIGTKYFAKKINLEQQKNAILARLNDFNVIFSNENGNGIICRIDKGKEEMEYFSRNCLIRNGRNRFSSEEKDIFTNHSNFDKWNVGANGNVIRGIQWVKTKRNEDICENSKMTDSSVEDAKIAKWNIKEENVIVDEEPPIVVLVKRLKKLFTVENLVRFEKFGVIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJH8</accession>
    <name>A0ABV2AJH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Vacuolar protein-sorting-associated protein 36</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">ESCRT-II complex subunit VPS36</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">VPS36</name>
        <name evidence="3" type="ORF">MHBO_001586</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the endosomal sorting complex required for transport II (ESCRT-II).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the VPS36 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000412">
        <property type="protein sequence ID" value="MES1919826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040608">
        <property type="entry name" value="Snf8/Vps36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037855">
        <property type="entry name" value="Vps36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13128">
        <property type="entry name" value="VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13128:SF12">
        <property type="entry name" value="VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04157">
        <property type="entry name" value="EAP30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0967">Endosome</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="5"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="25628" checksum="9EFB6CD5C4CABC12" modified="2025-10-08" version="1">MDKSFEDIKSLLNNAEEMVELAKKLKNSQNEEIDDLFGDLGIVSHISKKNLGSKYYLALAEQMEDFLIRPLETKDGILSLTEIFCIYNKTKVTNFISPGFYQNRKFRHKNQIYKNFQKDDLINALRIVDEKSKKMKLKKFSSGLNAVVLTEIFEKRTLYKKFEKFAKEKEHFTVFEICSIFGLSYGIANDLIMEAESDLILCRDETDFGTMFYENKFLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ2</accession>
    <name>A0ABV2AJJ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001430</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000348">
        <property type="protein sequence ID" value="MES1919634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="4"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30562" checksum="B628D2CAC93645D8" modified="2025-10-08" version="1">MDNYTLIKTISTKGKTAIIKVRRVEDDEIYCIKIQKIQNRKYIEKEITILKQIDHPFIIKMKNAFIENENIYVVLEYCENGNLKNYLNNVKTSQTKLHLKQLMSSIYYLHSKCVVHRDLKPENILVTANNEIKLADFDSSTILSHRNQKITAYAGTSIYMSPEMMNRKLYGIDVDWWGVGMVGYFMATRKHPFLSHLRKSSEEIKYRTNFLTPSFPSHLSEKMIWLLNCFLKKQPENRLSLDRMFSEDDESLPQFLKMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM1</accession>
    <name>A0ABV2AJM1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Zinc finger C2H2 LYAR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001618</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000426">
        <property type="protein sequence ID" value="MES1919865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.490">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039999">
        <property type="entry name" value="LYAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014898">
        <property type="entry name" value="Znf_C2H2_LYAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13100:SF10">
        <property type="entry name" value="CELL GROWTH-REGULATING NUCLEOLAR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13100">
        <property type="entry name" value="CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08790">
        <property type="entry name" value="zf-LYAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51804">
        <property type="entry name" value="ZF_C2HC_LYAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Zinc finger C2H2 LYAR-type" evidence="9">
        <location>
            <begin position="30"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="80"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22458" checksum="01F6081E2D9B4B4F" modified="2025-10-08" version="1">MVSFVCDKCQSTLKKKTATKHMRRCKSKNVSCLDCQKEFNSKNIKTHISCITEDQKFKVTKKTIHEKAEKSYQQKMQIKSKKDDLEKNEKTDKIKNKKIKKIGNEKDLTNEPLKIDGKDNIPDKGPNRITSLQTVMLSELSNHSNGISLKKFLKNYLKRINGENKEKEKVENSKNELWTILLKSSQMIKLRLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJP6</accession>
    <name>A0ABV2AJP6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transcription initiation factor TFIID subunit 1 histone acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001612</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000424">
        <property type="protein sequence ID" value="MES1919857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040240">
        <property type="entry name" value="TAF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022591">
        <property type="entry name" value="TAF1_HAT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13900:SF0">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12157">
        <property type="entry name" value="DUF3591"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription initiation factor TFIID subunit 1 histone acetyltransferase" evidence="3">
        <location>
            <begin position="19"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21428" checksum="81B2F5778C145297" modified="2025-10-08" version="1" fragment="single">KSSEKTVDKNIIFVNYNEFHKECDFQYEPLVKERLRHWASFERGSENLWAFKGNKDVLNRSFVETVSSPDDACVIESMRIAEQRLHDLGITDLYSISFETLKRINNGTNDSLKQIAKFIARELKDTPWHKTSVFNQARMRRCFLQTRNPNGTLINGDFGFKLKRERSRKNNSEKCLKLIFSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJY1</accession>
    <name>A0ABV2AJY1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">hydroxymethylbilane synthase</fullName>
            <ecNumber evidence="4">2.5.1.61</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Hydroxymethylbilane synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">HEM3</name>
        <name evidence="10" type="ORF">MHBO_001551</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>dipyrromethane</name>
            <dbReference type="ChEBI" id="CHEBI:60342"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 2/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the HMBS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.61" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000398">
        <property type="protein sequence ID" value="MES1919779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004418">
        <property type="term" value="F:hydroxymethylbilane synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.10">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.40">
        <property type="entry name" value="Porphobilinogen deaminase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000860">
        <property type="entry name" value="HemC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022419">
        <property type="entry name" value="Porphobilin_deaminase_cofac_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022417">
        <property type="entry name" value="Porphobilin_deaminase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022418">
        <property type="entry name" value="Porphobilinogen_deaminase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036803">
        <property type="entry name" value="Porphobilinogen_deaminase_C_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00212">
        <property type="entry name" value="hemC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11557">
        <property type="entry name" value="PORPHOBILINOGEN DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11557:SF0">
        <property type="entry name" value="PORPHOBILINOGEN DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01379">
        <property type="entry name" value="Porphobil_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03900">
        <property type="entry name" value="Porphobil_deamC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001438">
        <property type="entry name" value="4pyrrol_synth_OHMeBilane_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00151">
        <property type="entry name" value="PORPHBDMNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53850">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54782">
        <property type="entry name" value="Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00533">
        <property type="entry name" value="PORPHOBILINOGEN_DEAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Porphobilinogen deaminase N-terminal" evidence="8">
        <location>
            <begin position="5"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Porphobilinogen deaminase C-terminal" evidence="9">
        <location>
            <begin position="228"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="35736" checksum="F67BB6E9F558AA6D" modified="2025-10-08" version="1" fragment="single">MAENIRIGTRGSKLALWQANKVQTLLKERHPFLTFEIKTFSTEGDLATDAPLYALESQGVFTKELDRALLENRIDMAVHSLKDVETSLPSKIVLACYLKRDSKEDALIVRSSLRATTKSLNQLESENGIIGTSSVRRKAFLARNFPFLKTVDIRGNIDTRIEKMETRDISALILSAAGLERMGWSHLIAEKLDVPHAVSQGVIAVACLESKTKIAGLLETVDDEETRLSCIAERALLSGLKGGCKVPVGVTTSFSRAGMQFNLKLRAAVCSLDGKEFCEESEQIKFENNGEKEVEAAKLGIRVAESLDKKGAQRILRGCRDLVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK08</accession>
    <name>A0ABV2AK08_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cyclin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001742</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000478">
        <property type="protein sequence ID" value="MES1920012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013922">
        <property type="entry name" value="Cyclin_PHO80-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15615">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15615:SF108">
        <property type="entry name" value="PROTEIN CNPPD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08613">
        <property type="entry name" value="Cyclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="222" mass="25846" checksum="74FB7526DAE6283B" modified="2025-10-08" version="1">MDFKRTKGIIPSFACALKRLCSKNDFADVRQMPASRFDSFEAPSVTILDYIIRIYKYSRSSYKSYIYAFIYIDRIINSNLFIVNSYNIHRLVITSLMIASKFIDDRGYNNELHSKMGGVSLEEINSLEVEFLFLLNFNLFVDEKECQCYDQFLQEHAIGKSCSCLDDLYFVEQKLPDYIFARKKVPSGPIIRSAFVSTVAAKSRSVKHKEKHIHGQLRNRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK32</accession>
    <name>A0ABV2AK32_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001412</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000340">
        <property type="protein sequence ID" value="MES1919612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="12820" checksum="1E3E929086F274D8" modified="2025-10-08" version="1">MDPTLRAYKYYLKSCLLRFGNNPQILNQLVFNARNLIVKNIKTTDIEKIKKIRKELIDSADFIRKNVAKIYDKDSKRVFKIDPQHTGVRVLKDGEKEDFCTGACICKPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK91</accession>
    <name>A0ABV2AK91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal RNA-processing protein 7 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001777</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000493">
        <property type="protein sequence ID" value="MES1920052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="235" mass="27773" checksum="B2CEAD582D8ADE7F" modified="2025-10-08" version="1">MAVNILQDFGTSAKINYNGEDKKQNLLFAKISNFVDKIDDQNLCKYLMFLTKGETEKSFLFVNVPTYFNKSNLLQFFSNFGDIHKIQFFDENDINSNWNIKENNKLLCKLNAIVVIYENEPNLNRKINFKFSNDKKFGIEKMVFEYSSKCKPESELREELENLINGNKNLVKHKNLPKHKKIEKDFGEYSKTRINKGLYEQTVSKYKDVSAKNILKKKFEEDKTKLEKKRKKVNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG6</accession>
    <name>A0ABV2AKG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001867</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000534">
        <property type="protein sequence ID" value="MES1920161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="36418" checksum="A260E4BDC4C8837D" modified="2025-10-08" version="1">MLSKPKHVINFATKRFFVIFKSPPRNTSLNFKDKDLKQMVKALPEKYFDKNKHPKGILHNRFSRFLAVKSMANKNGKPAPLFSDIPGQRPGDLVMKHILESKSPQNRNELWRSLSPKKFLVSKRHLSKVLHSLIARQILIVFQQEPKKPFVYTFNTEKKKIWNDYVAKTVKEREVFLQLFAESAKTKKAISELRAEREKRHLSKINSQNDQTIKKDLRRKQVLQGEGRNEKEKMENLEWKNIIWSGSGFVDKRERAEGIGCVYYERKKLVNDLLGITGPHPRKRRRALKFIEKKKEDFKRANEEIGREL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH8</accession>
    <name>A0ABV2AKH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Sulfhydryl oxidase</fullName>
            <ecNumber evidence="6">1.8.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ERV1</name>
        <name evidence="8" type="ORF">MHBO_001648</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + H2O2</text>
            <dbReference type="Rhea" id="RHEA:17357"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:16520"/>
            <dbReference type="ChEBI" id="CHEBI:17412"/>
            <dbReference type="EC" id="1.8.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.3.2" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000438">
        <property type="protein sequence ID" value="MES1919898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016972">
        <property type="term" value="F:thiol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.310">
        <property type="entry name" value="ERV/ALR sulfhydryl oxidase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039799">
        <property type="entry name" value="ALR/ERV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036774">
        <property type="entry name" value="ERV/ALR_sulphydryl_oxid_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017905">
        <property type="entry name" value="ERV/ALR_sulphydryl_oxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12645">
        <property type="entry name" value="ALR/ERV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12645:SF0">
        <property type="entry name" value="FAD-LINKED SULFHYDRYL OXIDASE ALR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04777">
        <property type="entry name" value="Evr1_Alr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69000">
        <property type="entry name" value="FAD-dependent thiol oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51324">
        <property type="entry name" value="ERV_ALR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3 6" id="KW-0274">FAD</keyword>
    <keyword evidence="2 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ERV/ALR sulfhydryl oxidase" evidence="7">
        <location>
            <begin position="84"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU371123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21704" checksum="877BB51B73726688" modified="2025-10-08" version="1">MLSSKTYKLTIFSLTMKDVSDLIKRDLKALKQKSDENECDNPSCEDSVVAGAIESLQPGDLLKSLEKSNVAKKRRTEAYQNSNGPLNRAEIGRATWAFMHTTAAFYPNKPKKVFQKEMKMLMYLLVKHYPCSYCSDMTMTEMAHNPPRTGSRNDFAKWVCEIHNEVNDRLGKPVFPCDIDSLDKRWRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL07</accession>
    <name>A0ABV2AL07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">AN1-type zinc finger protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ZFAND4</name>
        <name evidence="7" type="ORF">MHBO_001797</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000503">
        <property type="protein sequence ID" value="MES1920078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1110.10">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035896">
        <property type="entry name" value="AN1-like_Znf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050652">
        <property type="entry name" value="AN1_A20_ZnFinger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002653">
        <property type="entry name" value="Znf_A20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000058">
        <property type="entry name" value="Znf_AN1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10634">
        <property type="entry name" value="AN1-TYPE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01754">
        <property type="entry name" value="zf-A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01428">
        <property type="entry name" value="zf-AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00259">
        <property type="entry name" value="ZnF_A20"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00154">
        <property type="entry name" value="ZnF_AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118310">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51036">
        <property type="entry name" value="ZF_A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51039">
        <property type="entry name" value="ZF_AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="A20-type" evidence="5">
        <location>
            <begin position="242"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="AN1-type" evidence="6">
        <location>
            <begin position="306"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="371" mass="42843" checksum="09E77E12D069AB34" modified="2025-10-08" version="1">METNKTVPNKIYKQNESKLDDVGVWTADEIAKVVSAQDPKISEKQTSQILKIVESKDPRISNLSKNRISEKQLIGLLMDITDNELSDDKVKNLEAHQKILAIIRAEASTKAQKAIFQQCLKFATKTLNQIAMNRSKHRILQTRNFLVKKYIMDQPQILALFDSIGFKVDGTNRILSISDELAKNLESSSVLSDIEQTLHQLETNQISKTKCRGNCEKLTTAENSGYCPKCNLKRSSQETSITPKMTFCKKNCGFFGSEKTFGMCSRCYRLSKNKKTKRKSIDQKCKSALFRMGLLHWWRHLVQTDQTNMNRCWKCNKKIGFMAIRCQCRYYFCTQHRSTLDHDCPVNYKKRFEKKLLRNNPQITSEKVNKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL26</accession>
    <name>A0ABV2AL26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Origin recognition complex subunit 5 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000621">
        <property type="protein sequence ID" value="MES1920345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020796">
        <property type="entry name" value="ORC5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047088">
        <property type="entry name" value="ORC5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12705">
        <property type="entry name" value="ORIGIN RECOGNITION COMPLEX SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12705:SF0">
        <property type="entry name" value="ORIGIN RECOGNITION COMPLEX SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14630">
        <property type="entry name" value="ORC5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Origin recognition complex subunit 5 C-terminal" evidence="1">
        <location>
            <begin position="275"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="413" mass="48485" checksum="AA9C63FDB27827FF" modified="2025-10-08" version="1">MEEKKIESIKSEYVHRESEIDQIFSALNSPKNFSVRLLLIYGFNNTGKTSILSKIVKLSFSVFAFIDCRLFDDERNFYEEIIYQLNSKHEKLTLVPKYKALKFSDFCEKLNSINKSFCLVFDHFESIQKFGKMSLERLTRITDEIENAKIVFVQTGFDTKCLLGNDHIYKIFFDNLDKKQLSEIISSKLTKHKNIGLNKNDNARFKNLAKRVCDVFSVYTFDLQKLLQICYYLINELNGEFELSEIKKIERKICLNFNNLNFILAGDKNKKTDKLPKTFKYLIIGTFLASFLEKSMDKKIFNVFGDIKKNKKVMYKKISKTPKQTTLLAGPKIFNFARFSKIFNFVLNYCEENISFSDSILHFHLRTLENAKLIKKHGKNFGNKDKKWICKTDLNFNLYLANSVNFPLKEFFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL54</accession>
    <name>A0ABV2AL54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Structural maintenance of chromosomes protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SMC3_2</name>
        <name evidence="2" type="ORF">MHBO_001886</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000542">
        <property type="protein sequence ID" value="MES1920189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43977">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RecF/RecN/SMC N-terminal" evidence="1">
        <location>
            <begin position="98"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="28509" checksum="0A54EC8859787089" modified="2025-10-08" version="1">MADTGCADSSAAERLAKAPLGEIIQKLRATNAELRDLRVNRKALEQHVDFSRRHDELVARKREQDEGQKAIRGLIDHLDRRKGEAINRTFHTIAAHFGRVFEELVPHGEASLGIETGGDGEQIALAAPEQDLRVPTERFRGISLNVRFPGAEAVARLRGLSGGQQTVAALALIFAVQRCDPAPFYFLDEVDANLDAGHRAAVTRLLSELAAQPTQIVSTTFKPETLPAADRCFEVLFENKVSTVRRVSAEAASAVVLAGDGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL72</accession>
    <name>A0ABV2AL72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Deoxycytidyl transferase, variant 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">REV1</name>
        <name evidence="2" type="ORF">MHBO_002082</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000655">
        <property type="protein sequence ID" value="MES1920413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45990">
        <property type="entry name" value="DNA REPAIR PROTEIN REV1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45990:SF1">
        <property type="entry name" value="DNA REPAIR PROTEIN REV1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00292">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="BRCT" evidence="1">
        <location>
            <begin position="53"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="237" mass="27753" checksum="E0BD6223AA053985" modified="2025-10-08" version="1">MPKSNVEFVGSEMAYYKNRFEELDRIGDLPTETFNKRFNKLFQQNENSSKSIGNTDIFRNVKIYVNGYCQPPQSEIHRMVKTHGGNISFYYSRKVTHVVSQNFGTRLKKFRSSVIVKPSWITESVKNNRKLPICEFTFLPKTNILSYFKSVKSPRNCEKRVLGKLSKKSVESKNNVENKNFVNFGEIKDFLFRQKNLNSILKALEHFKTDKKAISDFKEFLQICNENDLLDQINSQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH5</accession>
    <name>A0ABV2ALH5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal protein L23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002014</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000614">
        <property type="protein sequence ID" value="MES1920334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013025">
        <property type="entry name" value="Ribosomal_uL23-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_uL23/eL15/eS24_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00276">
        <property type="entry name" value="Ribosomal_L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="Ribosomal proteins S24e, L23 and L15e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="148" mass="18184" checksum="357C2119F20D8FDA" modified="2025-10-08" version="1">MSKNRRFKTLHNYTVKLVIPQNRGEAELLRRQGVVKFIFPLKFNKPMIKAYLYQLYGIDPIYVATDIRRGKKKLFQIKEYNKTMYYYDKTVKIAYLTMRSGEEWSPYWGFYDHDERYRDWVLDRKHTPLTEEEKNDDERKFDWCGLDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM09</accession>
    <name>A0ABV2AM09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002341</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000812">
        <property type="protein sequence ID" value="MES1920698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11408" checksum="C3813EDF583F5528" modified="2025-10-08" version="1">MSLKSHNKTELKLVDYGDSDNDDENTKDSTNEILDMLENDIASFESMKTTNKVDPNDLKFAGNVFSLEEAKALADSVSSRKVITEAQKIRMIKNNVYFKNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM20</accession>
    <name>A0ABV2AM20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PCI domain-containing protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PCID2</name>
        <name evidence="2" type="ORF">MHBO_002039</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000630">
        <property type="protein sequence ID" value="MES1920362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045114">
        <property type="entry name" value="Csn12-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000717">
        <property type="entry name" value="PCI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12732:SF0">
        <property type="entry name" value="PCI DOMAIN-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12732">
        <property type="entry name" value="UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01399">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCI" evidence="1">
        <location>
            <begin position="222"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="320" mass="37081" checksum="B271E941E95232B4" modified="2025-10-08" version="1">MQNADAEDNIEIVIAKNFCIFTEKSKSEKLKSQEALSCILGKFYEWMNLEPQKRTNWYMFVLLFLLKEYSNLSDEIDLDEKSTKWKFEADSKIKTFFRLVAQNRIDTINHPNFYIYGLVTELFKIYFKAAINLQKALNLTKNEQSKTKILLFLIPIKALSSQFPTLEDFSKISKSEKALSILLKWAMATKNGDLKLFNELTDRLKHVVLNLGLEDLFLKVKSTTLYRNIVKKHSLSWMSSFDKTSPTKTSYAHHVPLHILQKAFDGDESSGKRSFEDIENILSNLIYDGLIKGYIARQRCLVLSKKLPFPPLLKGKILQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT4</accession>
    <name>A0ABV2AMT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphatidylinositol-4-phosphate 5-kinase</fullName>
            <ecNumber evidence="3">2.7.1.68</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">MSS4</name>
        <name evidence="3" type="ORF">MHBO_002587</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.68" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000997">
        <property type="protein sequence ID" value="MES1920981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016308">
        <property type="term" value="F:1-phosphatidylinositol-4-phosphate 5-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00139">
        <property type="entry name" value="PIPKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.810.10">
        <property type="entry name" value="2-Layer Sandwich"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.800.10">
        <property type="entry name" value="Phosphatidylinositol Phosphate Kinase II Beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027483">
        <property type="entry name" value="PInositol-4-P-4/5-kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002498">
        <property type="entry name" value="PInositol-4-P-4/5-kinase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027484">
        <property type="entry name" value="PInositol-4-P-5-kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023610">
        <property type="entry name" value="PInositol-4/5-P-5/4-kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23086:SF8">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 5-PHOSPHATE 4-KINASE, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23086">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01504">
        <property type="entry name" value="PIP5K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00330">
        <property type="entry name" value="PIPKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56104">
        <property type="entry name" value="SAICAR synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51455">
        <property type="entry name" value="PIPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PIPK" evidence="2">
        <location>
            <begin position="1"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="407" mass="47065" checksum="A1F315DB2C3DD988" modified="2025-10-08" version="1" fragment="single">KINFDENVKAKGINLVDKIQHGIKISLIKDKKKNDINGRYYFFLADSDENSFQFQNYAPSYFHKIRSLYGINENKYLDAICNKELLGGEKNNAGKSGQIFWRTQNQEFVIKTVTQKEATFLQSNLKIYIEHLENNPHSLISRFFGLHKIKVDRLRLRFVVMNNVFSTCKIPPQLIYDLKGTTEDRLVKQSSKLKKQPILKDLNFADRFILVSKQMSKSLLFQIKNDVNFFLKVGVMDYSLLLGVCVKNEENSEVLSVDTEIDVFAPLKYNQHFASSHISKASVFESGIKGPLGETYFLGIIDFLQEWTKKKKMANVFKTCAFCDCQQNKIDSVPPVKYAERFQEYLDSKIKNTRSLGSYSMGLDKIQNRILINCNSAYDLFVVDSAFSAFLNYSEKILMSKRQIYKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMZ4</accession>
    <name>A0ABV2AMZ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Structural maintenance of chromosomes flexible hinge</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">SMCHD1</name>
        <name evidence="1" type="ORF">MHBO_002622</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001024">
        <property type="protein sequence ID" value="MES1921021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13914" checksum="635CF074BD31F52C" modified="2025-10-08" version="1" fragment="single">KAYHGFIFPRTPGDVENCILDFSKPSPTLQNLILEEKLKDQFTVVVIRDIFKENGNRFIEREKREDLIKNLASVYHYYLNGVFGKSATPNQKRFSLKNLKPVDIEVSFHDDRRSLNEIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN54</accession>
    <name>A0ABV2AN54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arginyl-tRNA--protein transferase 1</fullName>
            <ecNumber evidence="2">2.3.2.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ATE1</name>
        <name evidence="2" type="ORF">MHBO_002679</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.8" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001075">
        <property type="protein sequence ID" value="MES1921091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004057">
        <property type="term" value="F:arginyl-tRNA--protein transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030700">
        <property type="entry name" value="N-end_Aminoacyl_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007471">
        <property type="entry name" value="N-end_Aminoacyl_Trfase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21367">
        <property type="entry name" value="ARGININE-TRNA-PROTEIN TRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21367:SF1">
        <property type="entry name" value="ARGINYL-TRNA--PROTEIN TRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04376">
        <property type="entry name" value="ATE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-end aminoacyl transferase N-terminal" evidence="1">
        <location>
            <begin position="6"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18463" checksum="DD34F9C4F7E5D70D" modified="2025-10-08" version="1">MFYVTTDSLSPADYQKFADAGFVRSGNLLYLVCPSSSCCPAYPMRLDVRDFKASRSQRKVLNRFGKYTNPTKTSENSHIRKTDFRKLNQILSKENGIYPQIRKFVVAKLEFLNCYEGFEDFVVGDENWDVSNFLTIKIFYKKAKSAQQKIKLYHNKSAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN85</accession>
    <name>A0ABV2AN85_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002709</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001099">
        <property type="protein sequence ID" value="MES1921126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009145">
        <property type="entry name" value="U2AF_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12620">
        <property type="entry name" value="U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01848">
        <property type="entry name" value="U2AUXFACTOR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="40"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="5">
        <location>
            <begin position="40"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8045" checksum="291509772B55198E" modified="2025-10-08" version="1" fragment="single">FGNTYVKFINPDDATKAFEALSGRYYAGRLIQVSHSPITDFSEARCRQFYEGYCARGNYCNFLHLKPVPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG2</accession>
    <name>A0ABV2ANG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002763</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001143">
        <property type="protein sequence ID" value="MES1921197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="3">
        <location>
            <begin position="53"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="174"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="489" mass="57335" checksum="EDC919B07FBFAFC4" modified="2025-10-08" version="1">MDDCETCSGKLEIYCCTEDRFVCKTPPCLEIYHKQCVLSESGENPDYKYPPECAICNKKIDFDSPDFKRVFCCYNHCHISCYHRYSSNQSDMICPQCKKPIPSEDVAFLNSKNGFLPNSENKNLSDKTQIFEKLLKKIAEAISGEKKFLGEKEDFGGPNDIFGDDDDILDQKELEKIKKLANDISEKLAKNEQNEILSKKNENLQNQIKNLSLKCSNSEKEISEQKEKFSDLIRLYEKSKNEAKIASKNESKYKTENEELQNRVDRFSDELKRVTDTSTNLIDQKSKIEKKLISKIKKMETEFRETELKLKKFELERAKMAETKTQIEENLEKERKVFEEKMAAISKKSDETKMDLDKKEIDLKKMEERIKIEKEKSFDFLNIKNELEETNIENEDKIAKINEALNNEKKNRKKLEMENVVLKRKIGEVENEKKKANVKVEKMDEFCRKSEKEIKRFAELRKTADVETDRLKKENKKIILECDGFANFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ5</accession>
    <name>A0ABV2ANJ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">H(+)-exporting diphosphatase</fullName>
            <ecNumber evidence="2">7.1.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002776</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.3.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001159">
        <property type="protein sequence ID" value="MES1921213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004131">
        <property type="entry name" value="PPase-energised_H-pump"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31998">
        <property type="entry name" value="K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03030">
        <property type="entry name" value="H_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="89"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="113"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="297"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="340"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="380"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="421"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="455"/>
            <end position="475"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="519"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="548" mass="58163" checksum="4329F82E958E84E9" modified="2025-10-08" version="1" fragment="single">MALHSNHKILTLIAKIAIPLSGLFGILFAAFSFLVLRKVRISKKGDSFSPLSDSDGDDVESIPSTEYFKIQAIYSKIQQGAYSFIRTEYIHFTPFFLVFAALLVFLIGSTNGYLFACLSGICFILGASTSLICGAVGMAIATYGNARTTISAQSSLEAAFQTSFTTAQIFGFLLPSVGLVSLFACLEAVRAIVGNYETACRILVTYALGASVMGLGCRICGGVYTKASDVGADLVGKTEKNLKEDDPRNPAVIADNVGDNVGDIAGMGADLFGSFAEATCAALIIVSRSKTLGKLEFSILLPLMLIATAVFVAMATTFVATKLWRPKVDSDVEWSLKLQVLIFCVFMIIAAFPICMVFLPSEFNVAKDGAVENISTNVKAFYCVAIGIAGGALVGLITEYYTSHSFRPVRSLSESAETGPATVIITGIALGYQSVLLPMFVLGIIMYIAFNFGEYFGIVMMGQGMLCCVFTFLLIDAMGPVCDNAGGIAEMAGLGEAVRDRTDVLDAAGNTTAAIGKGYGISLASVVGIALLISYNRLKDIQNVNVFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP4</accession>
    <name>A0ABV2ANP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine-protein phosphatase PP1-beta catalytic subunit</fullName>
            <ecNumber evidence="2">3.1.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PPP1CB</name>
        <name evidence="2" type="ORF">MHBO_002841</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001224">
        <property type="protein sequence ID" value="MES1921291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050341">
        <property type="entry name" value="PP1_catalytic_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668:SF496">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="1">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17040" checksum="0D94EBA9E0ED0390" modified="2025-10-08" version="1">MPICAVIDEKIFCTHGGLSPELENMAQIQNIRRPTDIPDMGLLCDLLWADPAKEVEGWGENDRGVSFTFGKDIVDRFTEKHDLDLICRAHQVVEDGYEFFADRKLVTIFSAPNYCDDFDNAAAIMNVDEDLMCSFQILKPQEKKLNPPGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANQ3</accession>
    <name>A0ABV2ANQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002624</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001025">
        <property type="protein sequence ID" value="MES1921023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051625">
        <property type="entry name" value="Signaling_Regulatory_Domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22872">
        <property type="entry name" value="BTK-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22872:SF9">
        <property type="entry name" value="X-LINKED RETINITIS PIGMENTOSA GTPASE REGULATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00415">
        <property type="entry name" value="RCC1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00633">
        <property type="entry name" value="RCCNDNSATION"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00626">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="41"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="93"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="145"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="192"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="26708" checksum="C889E8C30E3F7CD4" modified="2025-10-08" version="1" fragment="single">MFRQSIKNKALFFKSATALGCSFGVQALFLNCAFAEDTKKTRVFSWGASQYFQTGLGRNKGVYSPEPVSFFDDVAIADIQAGGQQTFVLAKDGKVYSFGRGDDGRLGHGGEANEVLPRVVESLLGTKIASLSCGEKHVAAVTEDGDLYTWGRGHSGQLGRDPSDLPRKVPGMANIKAVSCGKFHTVAVDSSGRVFSCGEGRSAALGHGDRDSREQFELVGNLKDVKITDVAAGEDFSLFLSEDGRLFSCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANQ8</accession>
    <name>A0ABV2ANQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">S-adenosylmethionine synthase</fullName>
            <ecNumber evidence="10">2.5.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">MAT2A</name>
        <name evidence="14" type="ORF">MHBO_002562</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the formation of S-adenosylmethionine from methionine and ATP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-methionine + ATP + H2O = S-adenosyl-L-methionine + phosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21080"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.5.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="10">Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Binds 2 magnesium ions per subunit. The magnesium ions interact primarily with the substrate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Amino-acid biosynthesis; S-adenosyl-L-methionine biosynthesis; S-adenosyl-L-methionine from L-methionine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the AdoMet synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000982">
        <property type="protein sequence ID" value="MES1920962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18079">
        <property type="entry name" value="S-AdoMet_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022631">
        <property type="entry name" value="ADOMET_SYNTHASE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022630">
        <property type="entry name" value="S-AdoMet_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022629">
        <property type="entry name" value="S-AdoMet_synt_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01034">
        <property type="entry name" value="metK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="S-ADENOSYLMETHIONINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02773">
        <property type="entry name" value="S-AdoMet_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02772">
        <property type="entry name" value="S-AdoMet_synt_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="S-adenosylmethionine synthetase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00376">
        <property type="entry name" value="ADOMET_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 10" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="9 10" id="KW-0630">Potassium</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-adenosylmethionine synthetase central" evidence="12">
        <location>
            <begin position="41"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="S-adenosylmethionine synthetase C-terminal" evidence="13">
        <location>
            <begin position="164"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1920962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="313" mass="34770" checksum="82BC8611C3905F18" modified="2025-10-08" version="1" fragment="single">KIVKYSTKGLDYKNCRIIFDIEQQSPDIAKSVHGGKQDENIGAGDQGIMFGYATDETKELMPLSHILATKLGLQLTKARKTGQIPWILPDGKTQVTVVYEKKKNGSILPKRVHTVVISTQHVESVDNETIRRDITEKVIKPIIPSEYLTAETKYLLNPSGRFVIGGPSGDAGLTGRKIIVDTYGGWGAHGGGALSGKDCSKVDRSAAYAARWIAKSIVRSKLAKRVLIQLSYAIGICQPVSIFVDSYGTVNKGHSDTDLTNLILENFDLRPGMIIKRLRLNRPIFRKTATYGHFGRDEFDWESPLKLEWLTRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ2</accession>
    <name>A0ABV2ANZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Wiskott-Aldrich syndrome protein member 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">WASF1</name>
        <name evidence="3" type="ORF">MHBO_002922</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001302">
        <property type="protein sequence ID" value="MES1921391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.150">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003124">
        <property type="entry name" value="WH2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02205">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00246">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51082">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WH2" evidence="2">
        <location>
            <begin position="410"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="208"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="235"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="271"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="301"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="376"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="407"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="420"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="471" mass="53208" checksum="0CF942E3CE1FC918" modified="2025-10-08" version="1">MATEKQVLARMADYADTLLQRATNILQNVEAATTQKQSKQRQTQKIFQHLQSISPSITNFSFSPRDSFDSYRSAANLEGDLFTAKTRPAHLRELLERADDMPDLQRMNRYRSDGRCCEKSYSDPSFQRADWIEKEIEKQKEIMARRKARGHKKKKKVQQEVVQAETVKRKVFLADGTVAFVEDENFDRLANQKAPKFEAPKVENVLPPKVPKENLLPPKVPKEKVSSEQNVLNKNVERERALNEIEEEKEKGKEKEMEKEKVLEEGFEPIRTNSAEENNFYSEDRKESANSFGSPPPFFAKKNDDLNEKVDLSEENFEDKKETDEIGNEVVTEKEIDDTPASLKGEEENELVVPKIKEEHGFAPSMEEGEKSGVAHPPPSEFLKPPPLAQVAAPSRNVAGSKVPSEAAKDRSNLLDSIRKGKALRKVKTKRSSGKAPSDDLSSSIFMVLQRRAAIIGSDSEDESSGGEWGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ4</accession>
    <name>A0ABV2ANZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002650</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001052">
        <property type="protein sequence ID" value="MES1921052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="60" mass="6752" checksum="A889FEFB05B0CA18" modified="2025-10-08" version="1">MICVKKGFPVYQVVSLIFVGILFIFALTLKFTSLLRPDAAQSSPESETEDEKKDLLVIDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP40</accession>
    <name>A0ABV2AP40_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cycloeucalenol cycloisomerase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002978</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001357">
        <property type="protein sequence ID" value="MES1921447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020532">
        <property type="entry name" value="Cycloeucalenol_cycloisomerase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35136">
        <property type="entry name" value="CYCLOEUCALENOL CYCLOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35136:SF1">
        <property type="entry name" value="CYCLOEUCALENOL CYCLOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="223"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="255" mass="30433" checksum="5C77CCE03944C044" modified="2025-10-08" version="1">MNKNSKKFKNLIFSENVSKSKGEMFFVVWSVLVLILLSYIIVTKRFLYFEANDYMKTGLFLFIPCVLIPLLCTERHLKWHQKYSTKANCFFFILAWISNYFWTNYFYSVLGVSYTFPAWRFNDVPFCLYLMSHSYFAFYHTIATLSIRTFSKFVSKNKVFSFVVIIPLSLVLAFFEAYSLKNFPYYSFENERKMYTVGTVFYSIYFIVTFPVFYRIDEKVGECWALETVITEALASCMAIFQLLDFWRLFIGKIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP42</accession>
    <name>A0ABV2AP42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002976</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001355">
        <property type="protein sequence ID" value="MES1921445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045414355" evidence="2">
        <location>
            <begin position="16"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17366" checksum="5B4E1CC46FFA0AB3" modified="2025-10-08" version="1" fragment="single">MCFFNFLFLINGVLSICKLPTDSKIYVAHSFKDSGFQNGDFVDFGINCLVPEQPSLNKVFINTPIRMYCNNNKFGIHDKNNSFFSTDDFECSFSVLYFIALFMEIFCGVTTIICLFVLFIFRRHSKREHYAQTEGKYAIKPDVVLDINDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP95</accession>
    <name>A0ABV2AP95_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">ARM repeat superfamily protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003029</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001422">
        <property type="protein sequence ID" value="MES1921501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040122">
        <property type="entry name" value="Importin_beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10527">
        <property type="entry name" value="IMPORTIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="403" mass="45180" checksum="EF927A096A6E313B" modified="2025-10-08" version="1" fragment="single">CKLSTDYFDFALQAWVRLARVLKADYSQYLKKLMPLIFRECNEESAQGRDALESDSGDEYNPSGNVAELESALSALANVPRDVGVGFYPFLGDAVAVLNDKIDYWGEESVRVYAARAYSALFSVVCLALKSNLVKANEALHCLSEFIQKLLSVFKDESDFAVKKSILTTISSLLEESPEMGLAYLSQNDNDKNILNTMFGLIKISAQTSFKIDENLKNEENDAEEISRYEAIRELETENVYKTAEVFSTVLKVMGDQAVPTFSAFLDQIINSLTKEDTEQIVKKAMLLIITDAVLYIPNTMQKYAEFLFKLYINLLETADMDIKQTSIYGLGILAEKCNAVVRGKALNLLKICTNLYTSLKTKEEENASMLRENAASAYGRITFACSKEINLNDSFPAWLKML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP97</accession>
    <name>A0ABV2AP97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">G-box binding factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">GBF1_2</name>
        <name evidence="1" type="ORF">MHBO_003027</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001419">
        <property type="protein sequence ID" value="MES1921499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="385" mass="44298" checksum="C3FB0D918C84E031" modified="2025-10-08" version="1" fragment="single">GETYVKESWNNIIFMTMCLSTLKILPEKTFDSEDFKTANGKTFPSLKKSIHSSNKQKSGFFAFFSSTKSDKIKSSEESFNRKTDKIMENLQLEKILQISFRRTSLSTICKVLTSILLDKSIKDVFSYNICRFLNESECIIFCLDRLSDLAERNRSHFDVLWPVIREDLFKILQNMNNVDYLTERAVVNALRIFIVYASIDVPVPTTNNNIDEKNGGRLVQISNTSEMAKILTNLISIDAKLLSFFYDRFVSFLIVLTNVYDYKPFIPPETEVFFAFLAKLAILDKSKTDLILVVDKILSEKIDSKVVLTSADLVVVLSEKTEKLDFKSVEILKKNLEKLSDKRKFVQKEKRNGFLKQLLKANYALLISDNQQIDSIKFSVLSNFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB3</accession>
    <name>A0ABV2APB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Prefoldin subunit 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PFDN5</name>
        <name evidence="2" type="ORF">MHBO_003049</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prefoldin subunit alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001438">
        <property type="protein sequence ID" value="MES1921522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011599">
        <property type="entry name" value="PFD_alpha_archaea"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009053">
        <property type="entry name" value="Prefoldin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004127">
        <property type="entry name" value="Prefoldin_subunit_alpha"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00293">
        <property type="entry name" value="prefoldin subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12674">
        <property type="entry name" value="PREFOLDIN SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12674:SF2">
        <property type="entry name" value="PREFOLDIN SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02996">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46579">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16655" checksum="19B8030137DC4471" modified="2025-10-08" version="1">MVSESDLKKLESCDAAKLSAIRQNHVNEINRLAEISQSLANYNRQYLRSKVLVDAVKKTSSEETKEKTFIPLTSAVFVRGEYESPSNFIVDVGANYLLERGYEATTDYLERSLQYCRQSLERTNRAIKENNDILKAIEDIAANKEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APD4</accession>
    <name>A0ABV2APD4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Gustatory receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002916</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001297">
        <property type="protein sequence ID" value="MES1921384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="318" mass="36890" checksum="CEC05E59DA620281" modified="2025-10-08" version="1">MDLFSLLDEFYRNVETRKITIYVVLLLISAIWKRLFSIVGNLFYSNNNSTHGSSLFEMLDLFPLFVSAFCLSKSLNNRMAKDDNIKMSRYIILSNVIFSIFFVFKSLSSFIDLMHVTIIDKYAVRDFSKMTNFSDFLVNIMALMAFAQYFQLLWPGQLESRFSDKEINLSCCFYLIFAKLCFPSFNSFVSFVFGKIGTSFGNLEDFFYLLNFALEIVIILGAAISVFEFSSVILIQSIPTDQSKKIYRAIRNVERNENVLECTNIKCWLYRNGNKNLNLSMKMRINQDSNENEMLIFAFSQLKDLTDNVAIEIDKDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API3</accession>
    <name>A0ABV2API3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003117</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001512">
        <property type="protein sequence ID" value="MES1921585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="11"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="353" mass="40900" checksum="6E710A976EDEFA47" modified="2025-10-08" version="1" fragment="single">NGGNIDKNDNKNGGNIDKNDNKNGGNIDKINVGDCPPILECFVELEGKKEELEETREFLDKFRVNVEGHSNISREMFYGQSKTFKQKKNVLIFEPKKRFEKVGKYTFTVEYFENRNQLKRRIESNALEFTVVPGTPKKLKILEKEKFENLSASNFGNCRLIAKEIDLEICDNFNTPIEDLNEFPDILIKVSSENGQNRNLPKLSYSQKNSKIKNLSVLEKSGDFEGDVFLEFLVHPNWSRKNNSSILNRLSSDKIKFYFSNDSKTVSKQKTLESKYAEVKRSIDYILKKLKPFESANNKNIAQFDVDGIESYISFPRNEAESILRNQIKKISNFIEENKRQLKLPFFDDPLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK7</accession>
    <name>A0ABV2APK7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005281</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001256">
        <property type="protein sequence ID" value="MES1921338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357138" description="EF-hand domain-containing protein" evidence="2">
        <location>
            <begin position="21"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="53"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14348" checksum="77F5A3091B189B5A" modified="2025-10-08" version="1">MRKETLVLLFIGLLISCCFSDETELQRKKKFIRIKVKIKIKVKIRLWKRNQPVHSEQLSCSFDAWDKNGDGRLTWEEFYDVTRSYSGSRNLHRIFDQTDEDGNDLLSSEEFAKSEILNRNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM7</accession>
    <name>A0ABV2APM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Chromodomain helicase DNA binding protein</fullName>
            <ecNumber evidence="6">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CHD8_3</name>
        <name evidence="6" type="ORF">MHBO_003159</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010001571">
        <property type="protein sequence ID" value="MES1921632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000953">
        <property type="entry name" value="Chromo/chromo_shadow_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023780">
        <property type="entry name" value="Chromo_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623">
        <property type="entry name" value="CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00385">
        <property type="entry name" value="Chromo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00298">
        <property type="entry name" value="CHROMO"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50013">
        <property type="entry name" value="CHROMO_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chromo" evidence="5">
        <location>
            <begin position="118"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="277" mass="32471" checksum="75607B825D60B1DB" modified="2025-10-08" version="1">MYGRLNDFSIYNQIPKRTQFTAKKKSLPRGPIAIPVYPPNSRKSHSKLIVDKILHQRRLNGTFEYFCTFKDLSKIHSEWLKEDVLKTLGSHAKNKFSRFKEEVNYFWSEGDPLFGEEIEPERILAGRPSRHSLNEERYEYFVKWVGQPFSSCTWDYEEDINNPEIFRRFKQINDQSRKTTLENAINADLGSFDENRKIDKSYRHENRLRDWQISGAKWLIRNWHNKTGCILADEMGLGKTIQAIALIDYIATCFGNGPFLVVCPLSSFLFGNFQPNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN4</accession>
    <name>A0ABV2APN4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">FH2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003171</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001581">
        <property type="protein sequence ID" value="MES1921643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2220">
        <property type="entry name" value="Formin, FH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015425">
        <property type="entry name" value="FH2_Formin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042201">
        <property type="entry name" value="FH2_Formin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010472">
        <property type="entry name" value="FH3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051425">
        <property type="entry name" value="Formin_Homology"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45725:SF1">
        <property type="entry name" value="DISHEVELLED ASSOCIATED ACTIVATOR OF MORPHOGENESIS, ISOFORM D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45725">
        <property type="entry name" value="FORMIN HOMOLOGY 2 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06367">
        <property type="entry name" value="Drf_FH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01139">
        <property type="entry name" value="Drf_FH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101447">
        <property type="entry name" value="Formin homology 2 domain (FH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51444">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FH2" evidence="2">
        <location>
            <begin position="341"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="286"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="286"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="302"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="316"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="410" mass="45604" checksum="16B231EFDEBE00ED" modified="2025-10-08" version="1" fragment="single">LQKSSKEQKLKTAYSLLVKQISEAKDIQLMVSAITLINVMVNSIHHLEERCHQRRFLLDDGILNAISKSTNDQQTNCKNADDLALLLNQFEIFEKEMENDRKESELLNINMNDPESVWNFLLKSSIESGHSAYLIDLMKYFLIIPNVRRLGHFIWQNCHNALQLATAFIINDKEIDEMEENIDRIDENVDFNAIIQKSFTKDARLLKYSEIKKIMEKKVAQSRSKSPEEIDAVENLRKEFNRYKIDKENEIAELKKSAALTAKPDSEKTGETALPVAAESSAELLPPPLAGAETPLPPPPLDTGAPVAPSIAGIGAPPPLGGIGAPPPLGASAPQKAYLPEKSNPSPSVKMKNLHWGILPVNKIEGTVWDGIKDDNVVLDKDEFEEMFKAKATASLKTGKSGGTKKPFKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN5</accession>
    <name>A0ABV2APN5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001584">
        <property type="protein sequence ID" value="MES1921647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="34"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11371" checksum="90DD30688BC367DB" modified="2025-10-08" version="1">MLSSKSLKLLKNSLQQAVDVNKSKEIDKMWKDRKSQKEKQTENVKQNKNCLENKKRKQNMNKLRSLYAEKKLLMNKCRKDILNEKIVFGSKLSTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ0</accession>
    <name>A0ABV2APZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003138</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001546">
        <property type="protein sequence ID" value="MES1921609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03568">
        <property type="entry name" value="Separin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="300" mass="36449" checksum="1EFDEB9F436B756A" modified="2025-10-08" version="1" fragment="single">KFDFSKICDKIAKLIKFETVLIKSLFCRKIKIFAEDFPFVENILEILQKTKYEKTTNVFTKAENCFYRAKYNFQKSKNFEESIKLLKKAIQFCDLSQIHFYTIKSKIFRFLAKIYLAQKEYFSYLFYLNEFFKSSFMLSKDDSIKFSAEMDFEERQVKKLLSNFPKNLVLYFFEYEKCELVFYDSFENNFFLTVTRIDVDLIGSDEYFPLVLEIPIAENTNENEMENVLKRYEQIMKENIDLTKSAPNMKTRDQKQQWWKRRKNLDNLLKQNLLDFEENVLKYSKFLLSNDFTKLFEFFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ54</accession>
    <name>A0ABV2AQ54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001776">
        <property type="protein sequence ID" value="MES1921796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="12327" checksum="F8DB58A0E396C347" modified="2025-10-08" version="1">MQQFMKSTPISSRNCFWFCFPPTLFYFIQEISVFDDIFYSSQRFLNFVKSFRFVIVICNIGISAIPAISLKTVSLFDQNEPKFILQKFFRPRITDFSLKMFWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN3</accession>
    <name>A0ABV2AQN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003502</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002014">
        <property type="protein sequence ID" value="MES1921975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32046">
        <property type="entry name" value="G DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32046:SF11">
        <property type="entry name" value="IMMUNE-ASSOCIATED NUCLEOTIDE-BINDING PROTEIN 10-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13555">
        <property type="entry name" value="AAA_29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="6957" checksum="AA4C2E10BEC12C2A" modified="2025-10-08" version="1">MGISVKEKTIMLIGATGSGKSTLVDGMINYVTGVNFDDPYRFSLLQLEKEEQKTNNQVSLRCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQU1</accession>
    <name>A0ABV2AQU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003552</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002115">
        <property type="protein sequence ID" value="MES1922035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="288" mass="33982" checksum="C4D52FD2F4392ED8" modified="2025-10-08" version="1" fragment="single">MAEKMINLRNFILALKTKIFSDIELIHFRHRHLITSHFLSHNKWTLTHPEDNLKRDFVFESDIRNTLHHILGAYLIVGLEWHCDSGKGDIVLFDGLNTFFVIELKTEKNKIVEKQALKYSRTWQSMYPKSKVLAAFYTGENFQIHFDNEWVELLNNETTKEESCDFEEELDKIINFEKPETTNFGALLKGEEERIWRHKVFSQYFCAKNWLQSPSDVIKRTFLIDSLKKAFPVINEFEFVWAVDLRVLCDGTYNVVDAVFSKNETDFLFVFIKLKNNKTSQPLKIVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV0</accession>
    <name>A0ABV2AQV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LCCL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003439</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001924">
        <property type="protein sequence ID" value="MES1921909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.130.20">
        <property type="entry name" value="LCCL-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004043">
        <property type="entry name" value="LCCL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036609">
        <property type="entry name" value="LCCL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03815">
        <property type="entry name" value="LCCL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00603">
        <property type="entry name" value="LCCL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69848">
        <property type="entry name" value="LCCL domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50820">
        <property type="entry name" value="LCCL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LCCL" evidence="2">
        <location>
            <begin position="8"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="108"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="371" mass="42796" checksum="397E4BC5ED052B5C" modified="2025-10-08" version="1" fragment="single">MSKIKLINEIDITCNIAFLDICTDVTQFYLLCCTGHQYPNYPCFGSTETGYAQHSSICRAALNSGVKCGQQFFAFYVGESCRFDASSNNNSNSFAYEEWSKAFKIKEVKELFSEHSRLKQTVDELNKDKSVNEEKIRNLEFELEGYLMEKETAEALSDQINNKMRTAQNEIKVLKRKNTELGEDLKEAKKYPKEEFEKLKDERKVFLRRLGTAQTEKIELKSENAALKAKLAIFAKKKKIEKEENLLKTKLLNFEKELLTYQVSSGFHDLGQMAEKTIKEFCGEKESQNETGKKDNAISDMKKIFSVLGSLQIDVQNLDLELILDKNRKFYGIKKVMEELKNLVKSPSWECDKVITEEFNNTIKDFESNFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ7</accession>
    <name>A0ABV2AQZ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Sphingomyelin synthase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_003612</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the sphingomyelin synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002207">
        <property type="protein sequence ID" value="MES1922096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045221">
        <property type="entry name" value="Sphingomyelin_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025749">
        <property type="entry name" value="Sphingomyelin_synth-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21290:SF62">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL:CERAMIDE INOSITOLPHOSPHOTRANSFERASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21290">
        <property type="entry name" value="SPHINGOMYELIN SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14360">
        <property type="entry name" value="PAP2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0746">Sphingolipid metabolism</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="37"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="61"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="Sphingomyelin synthase-like" evidence="10">
        <location>
            <begin position="6"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF14360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1922096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="10931" checksum="1735B7CD3724A258" modified="2025-10-08" version="1">MDFFTGCGDLIFSSHTLIVLNIALTVRHYSESKAVKIFVWALVIMLVPLIIAGRHHYTVDVVIASYVVPLVWNFILSFNDPKFPVLSSDNFFLEQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARP0</accession>
    <name>A0ABV2ARP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003848</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002613">
        <property type="protein sequence ID" value="MES1922341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="20095" checksum="7C54289C24E03E0A" modified="2025-10-08" version="1" fragment="single">MVTRKTKIDLNFDTNKNRLTCEEQNIATYRPDEEPDELAKRKLKSFRIWRELLEFPLYNNVVDDRLIRVMITQFDTLNKKMAEVNKDDWERLRKKRIDKLPMFTAMTEDGSFSEFFTSMNGLSSVYAKLVLKSRIVHDPNNEKSKSTYLFNGDFFEDEDISEMDKIIAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART2</accession>
    <name>A0ABV2ART2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="5">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">DDX18</name>
        <name evidence="7" type="ORF">MHBO_003894</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="5">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DEAD box helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010002707">
        <property type="protein sequence ID" value="MES1922386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="6">
        <location>
            <begin position="39"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23526" checksum="6C7B1789076D9239" modified="2025-10-08" version="1" fragment="single">VLLSATQTKKTKDLAKLSFKKTQFYVGVDDKETHSTRLGLEQGFVIVEPEKKFLLLYSFLRRNRRKKTIVFLSTCSSTRFFAELLNYIDIPVLELHGKLKQSKRTSTFFEFCNAKNGCLLATDVAARGLDVPEVDWIIQYDPPDDPKSYIHRVGRTARGLNGRGKALIFLQPTETKFLQMLSENKVPMKEFNFPKNKISDVQSQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART9</accession>
    <name>A0ABV2ART9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Rab GDP dissociation inhibitor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003683</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Rab GDI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002318">
        <property type="protein sequence ID" value="MES1922166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.405.10">
        <property type="entry name" value="Guanine Nucleotide Dissociation Inhibitor, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.519.10">
        <property type="entry name" value="Guanine Nucleotide Dissociation Inhibitor, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018203">
        <property type="entry name" value="GDP_dissociation_inhibitor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787:SF4">
        <property type="entry name" value="CHM, RAB ESCORT PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787">
        <property type="entry name" value="RAB GDP-DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00996">
        <property type="entry name" value="GDI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00891">
        <property type="entry name" value="RABGDIREP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="319" mass="36829" checksum="9405CD1780CDFC56" modified="2025-10-08" version="1" fragment="single">IFKAFSKQIEKMDRTDKLNFDVIIEGTGFVQSLLSAAIAKIGKSVLHIDRNLYYGQDFATFSLKQFLNWINHTENDSSFVNKTIIFCNENFEKTNEKSFNIEISPHLIYSAGKIVNGIKATKIPKYINFCSIEENYILEDDFDKLPMSRSDLFKSRLIDINEKRKLGKILNDLTKKSEKTNSLENYFLSFYGASEEISKYLHKPLINMLENYRLSQKSTDYLAYGCGFLDAKNEKSFAESKFDHLNEKAIKTLPRIKLFLQSTGIFSKGPFIYPRHGSCDLVESFCRSKLLFYSLKIKSSTFYLFLYGYGDASLSKTCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARU3</accession>
    <name>A0ABV2ARU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Large subunit GTPase 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">LSG1</name>
        <name evidence="6" type="ORF">MHBO_003888</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002694">
        <property type="protein sequence ID" value="MES1922381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043358">
        <property type="entry name" value="GNL1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45709:SF2">
        <property type="entry name" value="LARGE SUBUNIT GTPASE 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45709">
        <property type="entry name" value="LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="155"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="156"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="169"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21602" checksum="0D1BD62FDCA5A2AD" modified="2025-10-08" version="1" fragment="single">LCDCPGLVFPSLSNSRAELICSGIISVEHSKNLFESVELITRRVPTHYFLKVYKGLTLPVNEEFVSCQRVLSTLSTQKGWLTACSQPNLSKSARQIIKDYLSGDLLFCFAPPDLGEEELQDFYKIEKKGLKEELGMRKETPLLLEKEKVFDERLGGSKKKHFRRTREFRRKERKEMNSQKRSVKILT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS14</accession>
    <name>A0ABV2AS14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002888">
        <property type="protein sequence ID" value="MES1922465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17172" checksum="DEEED082FC7BA32F" modified="2025-10-08" version="1">MAEKKSCCWNFVGRFYDLYFYSKNKIIKFAGRGKTLKVRSTWIVSQAIGITLAIFSCYKIGYFPKETRGLIAIFIVLIISYILFSLLHLIKISECCVCLGCEVNATNRHHLVAGYTFCLSFLSVGYGFYLGSISFFAWIYFVSMVYCLTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS45</accession>
    <name>A0ABV2AS45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dynein heavy chain 3, axonemal</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DNAH3</name>
        <name evidence="3" type="ORF">MHBO_003779</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002498">
        <property type="protein sequence ID" value="MES1922271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00840">
        <property type="entry name" value="MPP_Mre11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041796">
        <property type="entry name" value="Mre11_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10139">
        <property type="entry name" value="DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10139:SF1">
        <property type="entry name" value="DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calcineurin-like phosphoesterase" evidence="2">
        <location>
            <begin position="9"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="25889" checksum="5319BE304CDA184E" modified="2025-10-08" version="1">MSKNGESTFKIVIATDNHLGCYSNDAIRSDDSFATFEEVLKQSVAEQADFLLLGGDLFHHNRPSQPTVHRCLRLLKKYCLGSREVGFEVVSDQSFNFAEKRANFEDPNLKISLPIFSIHGNHDDPTGIENLSVMDIMSTANFVNYFGKAVDISKINIKPVLMRKGRTKLAVYGLGSIKDERLHRLFLDRKVKFSRPAEDKEDWFNIFVIHQNRFIDLLKQVQAFFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS95</accession>
    <name>A0ABV2AS95_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Para-hydroxybenzoate--polyprenyltransferase, mitochondrial (PHB:polyprenyltransferase)</fullName>
            <ecNumber evidence="9">2.5.1.39</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">COQ2_2</name>
        <name evidence="9" type="ORF">MHBO_003745</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UbiA prenyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.39" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010002445">
        <property type="protein sequence ID" value="MES1922237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008412">
        <property type="term" value="F:4-hydroxybenzoate polyprenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039653">
        <property type="entry name" value="Prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030470">
        <property type="entry name" value="UbiA_prenylTrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11048:SF28">
        <property type="entry name" value="4-HYDROXYBENZOATE POLYPRENYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11048">
        <property type="entry name" value="PRENYLTRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00943">
        <property type="entry name" value="UBIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="101"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13658" checksum="53C1D99466D372DF" modified="2025-10-08" version="1">MLKSRLKNCFLRAKPYLSVVRANNQIGTYLLFFPCAWSTAFGASNGCFPDLKILTLFLSGSFVMRNAGCIVNDLIDVDLDAKVDRTKNRPLSSGLLTKSKAIYFLISQLLIGLMVLAQFNTKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP5</accession>
    <name>A0ABV2ASP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004098</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003148">
        <property type="protein sequence ID" value="MES1922584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13711" checksum="1890671BEE5FE3AF" modified="2025-10-08" version="1">MPRLNAACRSRIGPGPPTCESNMITDSLLKPFHYRYGPRLKFTKRLMSFQISLIGCTVVRMTTRNRTRLQNQSTSYTIAVQILLTIVISKMGKTINSKQFDITIKNKRSTIRADTDSWRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS5</accession>
    <name>A0ABV2ASS5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004254</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003533">
        <property type="protein sequence ID" value="MES1922731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10797" checksum="DB545F847080293F" modified="2025-10-08" version="1">MTNCDKIDAEVKKDVTTLFWSEIVKERVEAARDYVCLPKMNILPTVNYADDDFDATINKNVLSLFNLWYILMRAEAYAVKCTETTYDSELEDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW1</accession>
    <name>A0ABV2ASW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004281</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003608">
        <property type="protein sequence ID" value="MES1922760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="21975" checksum="F3E012664406CE76" modified="2025-10-08" version="1">MFPAPFEDGNEKGSPQLAGFNDSPKLKKTTSKNQLRNLRKKMSKKRREKSAKQNAYSTCSSDELMDAKNLEEKKVYKPITEKHSLNERFKPENFYFSDGENRKTFMSSFKELSKFPEVLIEWSTFSASPVLHLVVRLAFKGKVGQCSIPTPYGCFSNEQVVEAKQKLCHSGLPLKSNDGGHYYARFLIEFGIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASY4</accession>
    <name>A0ABV2ASY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004103</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003155">
        <property type="protein sequence ID" value="MES1922589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10761" checksum="2D0CE6B4C0AB0318" modified="2025-10-08" version="1">MKTIVTIKPLNSRFSNNWALCCSEGSISESLSVLKKGSSSEFLDFSSEMPSCDKLAASHAETMSFGNGRNSGVKKLLFGLEKGPVRNCRCPLAFFYNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT27</accession>
    <name>A0ABV2AT27_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004153</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003286">
        <property type="protein sequence ID" value="MES1922634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20818" checksum="8771CFBB70A01856" modified="2025-10-08" version="1" fragment="single">MAIPEKNKLNVFRIPKHQKNGGKENLIASIKTNGNVLFTEFSQNGDLFCFSDERTFNLVRLNFDSDRIDKIDLILSIDYIKNDDAKWLNFPVVLAKFTFGQKLILLKRNLANNETELLNLANNETELLNLDNMSDFDKKFEQIFDKFGQIENFCVGNVSETICCCRKNGDLDLFEDFDKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT55</accession>
    <name>A0ABV2AT55_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pre-mRNA-processing factor 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PRPF6_2</name>
        <name evidence="2" type="ORF">MHBO_004360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003841">
        <property type="protein sequence ID" value="MES1922832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045075">
        <property type="entry name" value="Syf1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246:SF1">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22132" checksum="C7B6E381B90A7AB4" modified="2025-10-08" version="1" fragment="single">NPKKARAIIARALTFISKSTKLWLRAVRLENSREGKKAVLRKALRLLPASAKIWKTLIELEEEADAKLMLSKAVRCVPQNVDFWLALARLEDYENARRVLNEARSNLPGEPKIWIAAAKLEEAKNNDFAVKIVSKGIKSLKKHGVIIDRDFWIQSAYECEESDSPITSKAIIDHVLEENVEKNGRKMVWKADADS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT56</accession>
    <name>A0ABV2AT56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004133</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003238">
        <property type="protein sequence ID" value="MES1922616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="5936" checksum="D943554B2B7D1B5E" modified="2025-10-08" version="1" fragment="single">SYCGYAVHVVIGLMSSNSPMYEDETGCIRRLYRNLLLQCNNIIINECEEGHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB2</accession>
    <name>A0ABV2ATB2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphatidylserine synthase 2</fullName>
            <ecNumber evidence="2">2.7.8.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PTDSS1</name>
        <name evidence="2" type="ORF">MHBO_004435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.29" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003999">
        <property type="protein sequence ID" value="MES1922906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106245">
        <property type="term" value="F:L-serine-phosphatidylethanolamine phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004277">
        <property type="entry name" value="PSS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03034">
        <property type="entry name" value="PSS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16290" checksum="4605C80AEAF5A7D3" modified="2025-10-08" version="1">MQLSPESWAKTEWHPLATIKRFVVVNLVAFGIFMVEVNVFALKSALKIPHDNILNIYRVVFWFMLGVPATRQCYFYLSDPNVTRFGTVASLAVVTLFVETATAIKFSLADLPAKIPTRSLVLWGVYILLYAVGCVVMFRKIKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC0</accession>
    <name>A0ABV2ATC0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004162</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003313">
        <property type="protein sequence ID" value="MES1922643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PROTON/GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865:SF7">
        <property type="entry name" value="PROTON_GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="199"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="26734" checksum="232C045EAA82F2AE" modified="2025-10-08" version="1" fragment="single">MSRLLNCFIRPYEWMPPFLGILFGFLFGIALKSLGITKNDIILRMFGLFGNVYLNAIKLIIPLFIIVVMIRTSIGLSSMKNSRAIILASMITFFVTSMVASLIPVVLMQFIDVMNGIQVKTDTSLATSSNNDSVSEIVVTIVNEAFPNNFINSLLNSNALASMIYCTALGLFISKFRLKKIYKKVIGLIECFYNTINGMFLPVIYVTPIGVFCIVLSQIAVTNGLEIFGKLEYFVLVFVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE0</accession>
    <name>A0ABV2ATE0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003343">
        <property type="protein sequence ID" value="MES1922657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11775" checksum="EAA97682D3C012D2" modified="2025-10-08" version="1">MSYIDYNLNNYVCIIFVELNLIDLTSEENKWKKEIVKLSNNIELHLVRQGEDILYPWLMICNAKINCNHIDVTESIPDTLPHNELPGMKTFEVIKKIFHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE8</accession>
    <name>A0ABV2ATE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004467</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004085">
        <property type="protein sequence ID" value="MES1922935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="9802" checksum="D556658E6467591E" modified="2025-10-08" version="1">MIKTEKKTGDIDEKDFSGTDITTREGEKCLRDALKPLTDLTVAKDSNEFISVEIAMPVPFLKVYLSLSDCILIPSSFNVYFKSCFNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI9</accession>
    <name>A0ABV2ATI9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004526</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004278">
        <property type="protein sequence ID" value="MES1922993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="65"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="8935" checksum="BF922FF87C7BF2DE" modified="2025-10-08" version="1" fragment="single">KSYFSSGDNDKYYEDNHIRGDNGNLFEDKSYYCSGDNEKSYEATGCISCNDDKDTFQPNNIEQQSLSTKSSSDSTTSLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU19</accession>
    <name>A0ABV2AU19_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004702</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004923">
        <property type="protein sequence ID" value="MES1923158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11450" checksum="E209D48568F1270D" modified="2025-10-08" version="1">MCGAKLQIFGFSEAQFCKVYCRGKKLTDYLTSFDQIDSTPVLYCDYSDGSWKSNRQLNRSCLRNKVRHIVLPNGKSLSERNLKSIDDDSFYKVAIFTFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL0</accession>
    <name>A0ABV2AUL0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004899</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005701">
        <property type="protein sequence ID" value="MES1923338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="15909" checksum="E62EF8A30B68F91D" modified="2025-10-08" version="1" fragment="single">MIFTTNNNPYTRSGVLGITDFKKRIERYTVQSGKLKDSIHDMSISLPKRNRIPMYNIVAFDREKGLDTALVSTPKMIDSTFEAFDMSVRIGVLSKIRIENTDCLQTDLFNEHMLRIDRCNVSIVLNDLIYRLDNESAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN2</accession>
    <name>A0ABV2AUN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004631</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004627">
        <property type="protein sequence ID" value="MES1923092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17710" checksum="AEC2751C5C1DE799" modified="2025-10-08" version="1">MYSKRWLFTLNVFKTRLNYQRKILKMSCLNQSTLSANKNNDLDLSFEDKIKATRLRAIKLKLDRKNTESLKLWQEIIDVLEKRRSTSKIDRKLSKILGEAYCFRAHSKRLPAERAEDFEKAIRITKDIKGAVDLFKKELELKYAYVAYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ3</accession>
    <name>A0ABV2AUZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006387">
        <property type="protein sequence ID" value="MES1923477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16564" checksum="95F1CF308A97FA18" modified="2025-10-08" version="1" fragment="single">MNDPFYETWDKRKISSWREFRHINSQKNSIVLIDNIFDGHMYRHGLEKWWDTLSCLYRRYIKNPKLQNNITAFGNVHLLITAKENAITKASQFMNRDIPVFESGRVISTSRYPLDDSEKNRILDVQLDYALEKKGIQRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV71</accession>
    <name>A0ABV2AV71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005163</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006932">
        <property type="protein sequence ID" value="MES1923569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18879" checksum="B407AB9B1DFD32D3" modified="2025-10-08" version="1">MNNELENLLHLRSILQQNENFEKLKLINIKIAEILKKTNISDNKKMSDYIFEEMENDLLNDDFSIFRDFDKKQTEKQTENKLKLDDLMSNIDLKQILYSDNESNTISDNNKMEISNNNNAKFEPASNLTTLNLNKNNKLKKSKNSKINGCDDKLVEAIKNGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV79</accession>
    <name>A0ABV2AV79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004915</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005772">
        <property type="protein sequence ID" value="MES1923351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12232">
        <property type="entry name" value="RRM3_U2AF65"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003954">
        <property type="entry name" value="RRM_euk-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23139">
        <property type="entry name" value="RNA-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00361">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="91"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="21831" checksum="79AA03ED5523344D" modified="2025-10-08" version="1" fragment="single">YGPVSSFFLPQEPDGTSKGFCFFVYEDLSVTQEAIRGLNGIQIGESTLTVKLHSSPDKEDPAESLRKAQEVLIKTAAMKKDPPSKVICLLNMVTMEQLKDEQEYKENFEDVKSEAENFGRVREVVINRPGENKEGVGKVFVKFKSVSGARTALNCLEGRTFDKRTVYVKFFNEKDFDEGKLDVRKPLKKIGMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC7</accession>
    <name>A0ABV2AVC7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transposase IS4-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005233</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007262">
        <property type="protein sequence ID" value="MES1923625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="129" mass="15353" checksum="DCC5FBAB8021378B" modified="2025-10-08" version="1">MEGLKKNYLAFISNLDEDPEQIYLRYKGRWEIEECFDYLKNSLKVETPYQDSNEKIEAWAFINHISLIIFYNLINQIKEKDLSNKYTPEDIINISKNIYKIVLDDGQEIISETTQKEKDLFNELGLSFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD4</accession>
    <name>A0ABV2AVD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005221</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007210">
        <property type="protein sequence ID" value="MES1923616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8105" checksum="9B8F60077430FD22" modified="2025-10-08" version="1">MNKVKGARRAIRVEFREDSLGVRGQTQQREEMRTPQDHPHRNTKRSTMKILTSSTPTPMTAPNAGNSGRLTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE6</accession>
    <name>A0ABV2AVE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hsp90 chaperone hsp82</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">HSP82</name>
        <name evidence="4" type="ORF">MHBO_005244</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007303">
        <property type="protein sequence ID" value="MES1923631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00183">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17227" checksum="289741DCB794AE07" modified="2025-10-08" version="1" fragment="single">EKKEDKSDEVAVKDVSDAPEPKKEKKKVTEIVEEFTRVNSTKPLWAMKPEDIKKEEYTAFYKSISNDWEEPLAYKHFHVEGQVEFTVILFVPKRMPFDLFNNNKDPSNIKLFVRRVLINEQAKELCPEYLSFIKGVVDSEEMPLNIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVI1</accession>
    <name>A0ABV2AVI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005267</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007437">
        <property type="protein sequence ID" value="MES1923649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="14755" checksum="0DB0E8DF75C31C76" modified="2025-10-08" version="1" fragment="single">MTTLQNTKNEEIGRLKRCVETLKGDVARYKEYETELNSTKRSLRQLEGTLKQSDNSVESWKNKCDRQKTETAKYKHEADDLRKASRNLEKEHRKHLKEERTTNGGGGGKGWCGGGCGGGCGKGCGGGGCGKGCGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ADZ6</accession>
    <name>A0ABV2ADZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15545" checksum="D57C6E9496A05896" modified="2025-10-08" version="1">MNRTIQKTILFISTFGARGCQVGSIWEFLKSLKMLVTPKIKDHFLANLIKSDQVQLFCIKGYKKDAENLSETGVQPKEITDFSIIAKNPGKDVLSHLQEVEKKFVVFFRALVELRFDYLEYKVFKIKRRNVWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEI0</accession>
    <name>A0ABV2AEI0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">60S ribosomal protein L11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RPL11</name>
        <name evidence="7" type="ORF">MHBO_000139</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002132">
        <property type="entry name" value="Ribosomal_uL5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031309">
        <property type="entry name" value="Ribosomal_uL5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022803">
        <property type="entry name" value="Ribosomal_uL5_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057266">
        <property type="entry name" value="Ribosomal_uL5_euk/arc-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031310">
        <property type="entry name" value="Ribosomal_uL5_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003258">
        <property type="entry name" value="PRK04219.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11994">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00281">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00673">
        <property type="entry name" value="Ribosomal_L5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002161">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55282">
        <property type="entry name" value="RL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL5 N-terminal" evidence="5">
        <location>
            <begin position="15"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="Large ribosomal subunit protein uL5 C-terminal" evidence="6">
        <location>
            <begin position="72"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20209" checksum="2F0E1B9FF4E4C033" modified="2025-10-08" version="1">MAAISKDTKLAKKTNPMRDIRIEKIVINICVGKSTDRVTHAGRVLETLTKQQPVFSKARLTIRTFGIRRNQKIATFVTVRGKNAERLLALALKVKEYSLPKGCFNNTGNFGFGLNEHIDLGLQYDPKVGIFGMDFSVALCRAGKRVSKRKRCRSKVGCSQRIAPEDARAFLSEKYDVDFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEN9</accession>
    <name>A0ABV2AEN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">K Homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000176</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000022">
        <property type="protein sequence ID" value="MES1918165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="entry name" value="K Homology domain, type 1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055256">
        <property type="entry name" value="KH_1_KHDC4/BBP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10288">
        <property type="entry name" value="KH DOMAIN CONTAINING RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22675">
        <property type="entry name" value="KH-I_KHDC4-BBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00013">
        <property type="entry name" value="KH_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50084">
        <property type="entry name" value="KH_TYPE_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="260"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="498"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="585"/>
            <end position="665"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="58"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="763" mass="85981" checksum="385C31894D440427" modified="2025-10-08" version="1">MVDNDSNGQKSDNTKKVDIAIVSDKIDPETEKDQNQKEKTIQFQKSTNKRKKPLIDDSIQTNKKLAFESSTPTLSGLKTSEQNSNNESLKIDKSNNNEHKNNNEPDEKNQNKNSIDLTDSNKYVEELESEYRSIQTEQENIPDDVAKISAYLNNENLIEDVNKIQSQNLVQENPVLAQNKSLNFDQNNETMAYQQGPFDQQPYFQNQSNFQSVQNQQNFPQNQLGMQETPNNYQISGNAQNNVFNSMDQFEALIEQCGPDEFKAEMEVPSQIKNEPTLNFVGMMIGPGGYTQKQMEKSSGCSITVRGSGSARHNTPLDSHRPMYVLVKSNHVANVRTGIAIVSELLNDKSKRDALRAQQMAMRNANLNNSAQNYANPAFYMRQVGQMNGPPSFPAMSQQTMSSNRSPFQNAFKVSYLGDGQIVESIIIPAAKAVLLSENNNAICEEVGYYSSVRIEIKDVPGNQTLMELILQGTKEQVSIARTKLQAYMDNDPNELPQDSSDFVMIPNTVVGLLIGKNGETIKKFMSDTSCKIKVVPEYLSNPEKAERKILLEGNTNQVANAKFVINDLVNKHKTSNYTTANTGQTRVEVVSIPCGCIGILIGKGGETIRALGQRTSCRVQVVQYDENQLFPGGVIQNQNLRHVSLRGDETSLKKAKIEIQAIINEHAHRNNYEAPRLENDFGDPHLGLTEDQYQKYLDQMKAHFNMEKDQVHEYYHRVMSEIAREPAEYAAQVRQYMQQTVQQPAPQWGGTQWGQQPYGQQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEX7</accession>
    <name>A0ABV2AEX7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serine/threonine-protein phosphatase</fullName>
            <ecNumber evidence="4">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PPP4C</name>
        <name evidence="6" type="ORF">MHBO_000243</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the PPP phosphatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000032">
        <property type="protein sequence ID" value="MES1918245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07415">
        <property type="entry name" value="MPP_PP2A_PP4_PP6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047129">
        <property type="entry name" value="PPA2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45619">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00125">
        <property type="entry name" value="SER_THR_PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0464">Manganese</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="5">
        <location>
            <begin position="108"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="304" mass="35108" checksum="C64534E427AEB6E1" modified="2025-10-08" version="1">MSDVDKQIEKLRRCEYLTEQEVKLLCQKANEILMEEGNVQKIYSPVTICGDIHGQFYDLIQIFKIGGDVPKTNYLFLGDLVDRGLYSVETFLIILALKVRYPDRVTVIRGNHESRQITTVYGFYDECLRKYGSTNVWTYCTETFDYLTLSVLIDNRIFNVHGGLSPVVYSLDQIRSIDRKVEVPHQGSMCDLLWSDPEDIEGWMLSPRGAGYLFGGSVVDKFNRENGIDLICRAHQLVMEGYKYMFDKKLVTVWSAPNYCYRCGNVASILQIDQNLKQDFKIFEATSDENRKLPLREAVAEYFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF14</accession>
    <name>A0ABV2AF14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11789" checksum="C770C8EEF0413FE0" modified="2025-10-08" version="1">METSRRKADWAQQCETLPINHYRYSNIICLNTILVINPFNGFNTIADWFDFFFRPILNDISRDIEIDKGGVVDWCGFIRSRCLQILKSVKENWWQKPNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF63</accession>
    <name>A0ABV2AF63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Translation initiation factor eIF4E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">EIF4E_1</name>
        <name evidence="3" type="ORF">MHBO_000288</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic initiation factor 4E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.760.10">
        <property type="entry name" value="RNA Cap, Translation Initiation Factor Eif4e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023398">
        <property type="entry name" value="TIF_eIF4e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001040">
        <property type="entry name" value="TIF_eIF_4E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11960">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01652">
        <property type="entry name" value="IF4E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55418">
        <property type="entry name" value="eIF4e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="32"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="24921" checksum="3FBE0F732505E0F3" modified="2025-10-08" version="1">MSDSDSQISLDEELSNEQSKTAEDGENIVLEKNAKTTQDGHSKDAIEKPFWAFWYNSGKTPVVENNHSITEEEWMSALLKVRTFKLYKEYFEIENVFRPASEIARRSSYYFFREGITPTWEDKNNANGGRWFFSIRRENKEDIDKTWRLLIASFFAGAVKHMEDVCGAVVSSKNREYRVSLWVRNNISISDQHELGSSIKKILGVKSEVILKVFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB1</accession>
    <name>A0ABV2AFB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000326</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000046">
        <property type="protein sequence ID" value="MES1918346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="303" mass="35876" checksum="2C43C7FAC2CDE053" modified="2025-10-08" version="1">MSANEINEFIEDDCDKVSKRKPFSFNKTNTHIEYSERDKVTAEKIVEVGKSLPFIFQLGEESYCHKLKCYKRRTNMNLSNVSLQKRKIDFLYPYQRRVLTQIIIMSDFLVHSSIYLTDEIDFDRTVNFDPSGTAIFNLIQCEYVEKPDSETLKKHCTFLLRSINTVFFGKTTFVYMTSIIRSVAERIRNNLLNGSYLFDILVLYPNADPTEFIFGLNVENNFYIYDNTFHSFSINNLEDKEHFVGPINSKCVINVRIFKKNTKPLFDFMNLKDIPFSQKFDDWKFSFVIYNRRNVTEGYYLTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU2</accession>
    <name>A0ABV2AFU2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000513</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000084">
        <property type="protein sequence ID" value="MES1918560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="173"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="388"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="192"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="392"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="405"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="434" mass="48262" checksum="524C57AFECDA5A02" modified="2025-10-08" version="1">MNPLHPNFFKTPKLVSKLRGADLDISGKDSNSEGHGKETNKNSHGEPSLFGSEPNMNKKTRFGNRSEDIFFNEDISAGNAKKSFRKIGADNEPIFPKGFSCQIKERVLPLKNSKPLAEAPRTTNSGATETVVNRPKHRKLQNFGKKAENEKIDGTQKHWKLKKLPFKRKRRVPKYPSIDAGASPRLPQLSRASTDSSAPLSPSDLDKLKLYFGQVRGYFGRLRSEQNAVVARAYEDCPVALKEGVCALSGENSNNFLSLVQSAVARLEESVAAWIERKPKTAEKRLERRAAEDRKSILHLLLNAASGRVEKSRRLLKTEGRALALACVQLACSKFCFGSSRVPGDDQNADGKRDLVETVAKAQESSLLRLHERGARLLQKLVVFETRKKMKKEREEREDEKSGSKAKSQSNSELQSIILGLNPKSDSGSEKVVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ0</accession>
    <name>A0ABV2AFZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000336</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000048">
        <property type="protein sequence ID" value="MES1918359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="25746" checksum="4EA9B456EC0017A2" modified="2025-10-08" version="1">MENLGMYQILENEAKLNVERALWICEMATNGKNLYENENSQFVFQKISNFKQFYEAFLTGKGCADEDVEKILGEIKNIDVPIIFLENDSNNESAEYTLSAPSDWSQAVEQAHANKLFSQYSLKVDPDHHSVSIMGILTTLGVFSSAFIIQQATFGIFMSLGETSLQKWRKVQAFGMVIVYILCMTLALSGYIGQRDQVGQSVFEKMKMRYFTESGEVDYGFIVNESH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG02</accession>
    <name>A0ABV2AG02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="17245" checksum="9CA2A85896448A48" modified="2025-10-08" version="1">MFGKKKRKEEIAICSKGHILKKRPFDYLKEKHKSSANKCHLCGEESLEDQVGGYYFDEGCTIGLCSNCFNAMPIKKADTNAKNKRMLCGMSGADNFVCPSGHPTTFVMGSFSKEKNCCDVCSNSLLSEERRKPHFFCQKCAYKICLKCAVAENV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG21</accession>
    <name>A0ABV2AG21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000098">
        <property type="protein sequence ID" value="MES1918634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10182" checksum="4B5738829CF0B05C" modified="2025-10-08" version="1">MLQKKLFFCKSQKYEKLNSRKTPFFVGVLKDEIYNLGLETGIKDAIVIDLDTEIRIDGYEEKLFCPIVFLLQNSCLRKKLQRGIAKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG26</accession>
    <name>A0ABV2AG26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 9">Ornithine aminotransferase</fullName>
            <ecNumber evidence="4 9">2.6.1.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000588</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a 2-oxocarboxylate + L-ornithine = L-glutamate 5-semialdehyde + an L-alpha-amino acid</text>
            <dbReference type="Rhea" id="RHEA:13877"/>
            <dbReference type="ChEBI" id="CHEBI:35179"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="ChEBI" id="CHEBI:58066"/>
            <dbReference type="ChEBI" id="CHEBI:59869"/>
            <dbReference type="EC" id="2.6.1.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-ornithine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.13" evidence="4 9"/>
    <dbReference type="EMBL" id="JBDODL010000100">
        <property type="protein sequence ID" value="MES1918650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049704">
        <property type="entry name" value="Aminotrans_3_PPA_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050103">
        <property type="entry name" value="Class-III_PLP-dep_AT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010164">
        <property type="entry name" value="Orn_aminotrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01885">
        <property type="entry name" value="Orn_aminotrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11986">
        <property type="entry name" value="AMINOTRANSFERASE CLASS III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11986:SF18">
        <property type="entry name" value="ORNITHINE AMINOTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7 8" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="427" mass="46364" checksum="48DD978A36DC01E9" modified="2025-10-08" version="1">MIGKLAKNNLRMFHKGAPTFKISKKANIVIETENKYGAHNYAPIPVVIKRGSGVHVWDVDGKKYIDCLASYSAVNQGHCHPKIIGSLISQATELTLTSRAFFNDQLSVFEKVITNMFGYDKVLPMNTGVEGCETAVKLCRRWGYEKKGIPENEARVVFAEGNFWGRTLAAVSSSTDPESYKGFGPFMPNFDIVPYDDLTALEEKLRNPNCAGFMVEPIQGEAGVKVPSKGYLKGVRDLCKKHNVLFIADEVQTGLGRTGKMLCCEHEDVKPDVLVLGKALSGGVYPVSAVLANDDVMLVIGRGQHGSTYGGNPLAASIATTALEVLAEENLVENSRKMGLLLKEELKSLGVPFFREVRGKGLMIAVEIDGSNGVDAKSICLELAANGVLAKPTHGDIIRFTPPLCINQEQVVSVVEALDKALQSFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG49</accession>
    <name>A0ABV2AG49_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000103">
        <property type="protein sequence ID" value="MES1918666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040346">
        <property type="entry name" value="GEX1/Brambleberry"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33538">
        <property type="entry name" value="PROTEIN GAMETE EXPRESSED 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33538:SF2">
        <property type="entry name" value="PROTEIN GAMETE EXPRESSED 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18478" checksum="F9F22898637BD3A2" modified="2025-10-08" version="1">MSNFKTSEKSLNTMKKTLENMTEKIQSISLMDNLIVSEIMVVHSVLYFIAFTTFCYFATGLKQTFSVRLKLIMIGISNFVVEKVFRSVYANIDVLKWHKFVFVVRFCALIASLLLLFQSIVHYKDYVKESYILLKNNVVKEKGDSVRRNIIIPFLRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF2</accession>
    <name>A0ABV2AGF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000117">
        <property type="protein sequence ID" value="MES1918745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="20737" checksum="5A0CFEEC4C25358B" modified="2025-10-08" version="1">MFEKMTSNFLRNGKSIKSICNNNNKTHVFKCQNTNLVTNFTIKAYLFGEQISTEDLYNICDLACALNNDFNQKGVKLNQKNEIYCKNNKFVKIGVGVYTNVLILCVNKDFVFISGGKFRIVTNISCLNIGIGNCRHFDSLKGNLHYQCENRNLYFSCDIKFWPADHGWHRKFSSVCNGLNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP4</accession>
    <name>A0ABV2AGP4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">BPL/LPL catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000739</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000137">
        <property type="protein sequence ID" value="MES1918841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053264">
        <property type="entry name" value="Lipoate-ligase_2_inactive"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43506">
        <property type="entry name" value="BIOTIN/LIPOATE A/B PROTEIN LIGASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43506:SF1">
        <property type="entry name" value="BPL_LPL CATALYTIC DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21948">
        <property type="entry name" value="LplA-B_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="1">
        <location>
            <begin position="30"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="30991" checksum="7BE4A048495C3EF5" modified="2025-10-08" version="1">MAIFLLKSVKTNLLNSLRIQEMLMRHSIHNFIIINSGINTKNIVMGLADSKNPEKLISLRNARESGINLYKRFSGGGTVFVDENTFFVTFIFNKSGFLKTKPEICDPSEILHWTFPFYKKVFEFPDFAINGSDYSFGARKFGGSAQMISGRRFVHHTSFLWDFDLVKMDGILKIPKKQPQYRKDRTHKEFLIALKNRFNGKNEILSKIESVALSHDFGEKVDTKIISLDEDRICKSIDDTDDKNLLKIGDFDIFIKKKPKFLSRKIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT9</accession>
    <name>A0ABV2AGT9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000624</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000108">
        <property type="protein sequence ID" value="MES1918699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9351" checksum="F87A9CAC01046435" modified="2025-10-08" version="1">MLATKKPPLTRNRHFFNRGHSIIPNQHKRAFSRTKQSGHNPKIIRIVLLSRKIGIVKISNQDDLDKLLTRFELKPQTKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY4</accession>
    <name>A0ABV2AGY4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000659</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000117">
        <property type="protein sequence ID" value="MES1918744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="170" mass="19289" checksum="318DDF5DA97B7C7C" modified="2025-10-08" version="1">MSRNQLIIAEGNHLAECVEKSKMVAEENYLQKQIWVSCKKGVLGPKDFLCESTENSCDIDILRRVLDTETLKFLQNISKLRDGRNIQLNCADGQKIRMRCSKGEYMYRIDGKSYFFRGEASPCCEKDLKKRNIIIVKSFSVKFVVIIAVLIGAIIAISVSVVLVKKCCRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH34</accession>
    <name>A0ABV2AH34_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phosphatidate cytidylyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000674</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000120">
        <property type="protein sequence ID" value="MES1918764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="79" mass="9265" checksum="1BD305B83224B7A4" modified="2025-10-08" version="1">MVDRKTFHTLKIRVKSSIFLGIGFVLFIQGGHFAMLFLGLLIQIMMYNEIISVGRKKYLKEISFNNLHWFIAKFSILKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH53</accession>
    <name>A0ABV2AH53_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">SURP motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000872</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000173">
        <property type="protein sequence ID" value="MES1918992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.790">
        <property type="entry name" value="Surp module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045146">
        <property type="entry name" value="SF3A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022030">
        <property type="entry name" value="SF3A1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000061">
        <property type="entry name" value="Surp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035967">
        <property type="entry name" value="SWAP/Surp_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15316">
        <property type="entry name" value="SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15316:SF1">
        <property type="entry name" value="SPLICING FACTOR 3A SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12230">
        <property type="entry name" value="PRP21_like_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01805">
        <property type="entry name" value="Surp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00648">
        <property type="entry name" value="SWAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109905">
        <property type="entry name" value="Surp module (SWAP domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50128">
        <property type="entry name" value="SURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="SURP motif" evidence="7">
        <location>
            <begin position="31"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="380" mass="43396" checksum="A18B8D87B345204A" modified="2025-10-08" version="1" fragment="single">MTPKSEFVKEDKTFNFDVKPSPEVVALDVEIIKLTAQFVAANGRSFLATVSNREQKNPQFAFLKPTNASLFLYFSDLVQAYQRILNPSKETLSELKSESKDEKLVFDKLLGLAEFIQRTRKHEDLNRKNKEDEKREMALIDWHSFIILETIDYKDGDDDFLPPPSMTIDEINEHLEAEKRLNENIDKVGAKIIDEGLSDKNTTDKNRTEEDSVALETVPSMRTNFTKTANPPAPISRKQSSVEVQRCVVCNKNIPVSEIEEHIRIELLDPKWREQRLIAQSKKRKSTLAGPGEMSRNLKEFVGVRKRPFARPEERVNEDVIWNGNAKSAETSKIGPDKFGVKASVVEQNRNDESLIDVARENVQRQTIDNNFANQMAMAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI0</accession>
    <name>A0ABV2AHI0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000204">
        <property type="protein sequence ID" value="MES1919120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="316" mass="36470" checksum="08843DE156F50EF7" modified="2025-10-08" version="1">MEMERANKESFLQEIRRFGEFAAGKLPLNNKSLSRRQISEEVRVVCQVSYGFVSVAFRVLFRRNEAANRLTALSNALFDVMMLEKRGIDFIWDPFCGRGTIMATAAEKMAHLDTKNTLEEPVPGTLKSLEDKRKVQINEKSEKKERKDAKIQFFGSDLNIKEAVDRWEQIDEANKVPTKTDFMFLDKDFSIASENVKAEIDKSQHKRCAIVTTFPNFGNGSRLLSSFERFLLKNVEFREVFVLTQNPKFCDSLLEWDVLFSAKVGDRNFSAYRLNRPLSAKIRLHKRNLKKSKSPTEKIGLKKQIADLKETEILIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV5</accession>
    <name>A0ABV2AHV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase M24 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001124</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="entry name" value="Creatinase/methionine aminopeptidase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032416">
        <property type="entry name" value="Peptidase_M24_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050422">
        <property type="entry name" value="X-Pro_aminopeptidase_P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763">
        <property type="entry name" value="XAA-PRO AMINOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763:SF6">
        <property type="entry name" value="XAA-PRO AMINOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16188">
        <property type="entry name" value="Peptidase_M24_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M24 C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="55" mass="6375" checksum="095497EA544E1566" modified="2025-10-08" version="1">MVPIQTKMVDVSLLDDGEKEWLNAYHQKCLAKLRPLLEDDERALRFLESSCALIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ6</accession>
    <name>A0ABV2AHZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000253">
        <property type="protein sequence ID" value="MES1919310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13664" checksum="0D2F5EB8B73C907A" modified="2025-10-08" version="1">MLFAALGETLKLFLRSKNFIFEFIDEAKTFSAPTSPSPHTQFFSPNILFPVVSLLQNLESHKNRFRTTLLVFSRTAKSTEFRNFDRLFSSDNKLPKFGHLLSLHAIAKFPSPSNKSLISP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI39</accession>
    <name>A0ABV2AI39_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000263">
        <property type="protein sequence ID" value="MES1919353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="148" mass="16819" checksum="43D5B760FF45D6F4" modified="2025-10-08" version="1">METDYFNIIVPSAFVTLILVINTTCVCCFIRCTYMIISRKIPNQISTKTSNYRAGFGQQMQQEDQIDGVTSDIEDRVEITKNELEEDPYAEINEVEEHWRSNIVSRVENDNTGIGSATKSKTGTLILSLNFLFIRIFAKKLLIGNILT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB4</accession>
    <name>A0ABV2AIB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001265</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000286">
        <property type="protein sequence ID" value="MES1919428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045234">
        <property type="entry name" value="Unkempt-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493:SF50">
        <property type="entry name" value="RING FINGER PROTEIN UNKEMPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493">
        <property type="entry name" value="UNKEMPT FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="86"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="128"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="165"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="86"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="128"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="165"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="18"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="291" mass="33755" checksum="F6AC8848B4F90FEE" modified="2025-10-08" version="1" fragment="single">MGPENKIPHFSRNTTQDSKVHLSKTDKTRFKSQKSPKQEISDFAGKKYSSNGNEPNDLNYKNGHLPKRFGVLSLNKKERHKSIVNSYHTKVCSDEKSNKCPYDFFKCFDSHEPNYIRRVPFKTINGWNYNFEMCYFSEKGLKCSSGSSCVYSHSNDEKFYHPDVFKKSLCSSFTSNISCPRGNFCFRAHGKDDISSLSDNDFLVSNKNILAKKSTLKIFPKTESKSSQNNDFVKLTVHNATKDPNFYMFEYKTKPCLNVPCNNMRCCTNYHHEQERRRSPRNYKYSAEPCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH3</accession>
    <name>A0ABV2AIH3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000284">
        <property type="protein sequence ID" value="MES1919422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11500">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043153">
        <property type="entry name" value="DENN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051696">
        <property type="entry name" value="DENN_Domain_GEFs"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12296:SF21">
        <property type="entry name" value="DENN DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12296">
        <property type="entry name" value="DENN DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="385" mass="45283" checksum="E26B40634FA7BCA0" modified="2025-10-08" version="1" fragment="single">MCSFSVRNNRDFSISFISVAVPRSLYPFAVLQIEGFLEAPVPFLVCINDEKLFGRRKNAVKIDVDNDKIIFPENYVIPQMPIQALKKLKMALFRKLQDGNRKFSSFNNKLSPKPLLKNLRAKSALKYPILVDRSKYKNDRAFKNDNEKCVDFSGNKKLVVVTNKTEKAGISEKEKFKGKFRNIQESFLMFMGTILFNYSDSFKIEENKIVFDKNKFISSKKEKYKEFYDVLTSTQTWSFFCFAKAEKKNKISNNKVLFEKTGCNNEMDSIDFFDNFLENFRNRKSANLRKFGDTKRKTFLLSFPIFDIKTTRKRNLDFRPFFKLEKNLFGVPHKTKLFLSNLEYKQILAEKNRSKHDISQSHFLTTQILLIQLKSLQNFFLFVKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ4</accession>
    <name>A0ABV2AIJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001056</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000222">
        <property type="protein sequence ID" value="MES1919193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="32314" checksum="4184659CE4EF4E44" modified="2025-10-08" version="1">MGNHEEHQNKIFLEHQRRHSHESYKLRENIDILQDGHRKHKKSKERYEISTINFENIKNANRKKTLSKSLKIEPLFKVPNCKSIAISENGSTVLALYNTTLHIWKSGERIRIKTNSDFSIAAFSPSSDIFATGDVKGVVRIWYTADIFSDNAVKSFSRNFRKQFWRSNKIEKWPYPKETSQRSRLQCEFALARQYSFRPLFSRRRQLPDLGRGRRRVGDVADFNREKGLPSEIGRENKIHFYKSRQQNLCRDFERPFCKNRRHAHKSDNFDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV5</accession>
    <name>A0ABV2AIV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA polymerase alpha subunit B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">POLA2</name>
        <name evidence="9" type="ORF">MHBO_001395</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DNA polymerase alpha subunit B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000334">
        <property type="protein sequence ID" value="MES1919594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007185">
        <property type="entry name" value="DNA_pol_a/d/e_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016722">
        <property type="entry name" value="DNA_pol_alpha_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054300">
        <property type="entry name" value="OB_DPOA2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23061">
        <property type="entry name" value="DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23061:SF12">
        <property type="entry name" value="DNA POLYMERASE ALPHA SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04042">
        <property type="entry name" value="DNA_pol_E_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22062">
        <property type="entry name" value="OB_DPOA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA polymerase alpha subunit B OB" evidence="8">
        <location>
            <begin position="85"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="DNA polymerase alpha/delta/epsilon subunit B" evidence="7">
        <location>
            <begin position="212"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF22062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="477" mass="54493" checksum="BC99DE1E39CF0EBE" modified="2025-10-08" version="1">MADQNYLSEAQSFSIKTTNNRNKEKRQTAKIEQNAKKTKTDQNGLNLNRFEDFIANKNREKLNIDLKNSSNHFRFVEPVLERRHEALQKRIDFIANRFKKLQKIDNFEFTAVSALSESVQNFVIGFVAKDGESRLNKKNIYLQGCQSISNGEKISLNLDAIKKSISLFPGQVLVVKGSVIEEPRRELMATEIFDDFYSKKPENFSIENAFDFVFVSGPYFGPDNVKYEKSFLPKFAEILKEKAPSVLIMTGPFVSEDFPMLPNLNKTFSETFSDLMKSFFEDIETLFQVKSFKVLVIPSTKDVNATPFYPQPSFKNLTINENLHFLTNPASFSINGCKFCVTAADTVFDILQSDLRLANGEKTTKNGERWENLSSHLLRQKWLYPIYPPKNEKIDFENYSKLKIADDSEPNVLIWTSPSTKISNRLANCFVFEDKLSAIVYPGHLANNSGARGNYLEAKMRTGSSIADSFAFRINKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ47</accession>
    <name>A0ABV2AJ47_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001309</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000305">
        <property type="protein sequence ID" value="MES1919484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16454">
        <property type="entry name" value="RING-H2_PA-TM-RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051834">
        <property type="entry name" value="RING_finger_E3_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931:SF3">
        <property type="entry name" value="RING ZINC FINGER-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931">
        <property type="entry name" value="SI:CH211-59O9.10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="151"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="22910" checksum="BA7C21015B8A36E5" modified="2025-10-08" version="1">MSITRLFKSILVFIKQNWRQVSAHDIASFLFVLLIAVYLVSKNHLFFSFFILLSYFILLSIKMFTAYIVFFEHDDYQDEIRSMQNIVRIFGMDPVNLRLTLRGGDFTSEDYESLLELDQNISINKGLSENMKILFPVTKADESVLKMQKVCSVCLENLDLGNELRSLPCSHFFHTECIDKWFELSTKCPVCNKNFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ55</accession>
    <name>A0ABV2AJ55_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Syntaxin-binding protein 1</fullName>
            <ecNumber evidence="2">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">STXBP1</name>
        <name evidence="2" type="ORF">MHBO_001480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the STXBP/unc-18/SEC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000368">
        <property type="protein sequence ID" value="MES1919695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2060">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043154">
        <property type="entry name" value="Sec-1-like_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001619">
        <property type="entry name" value="Sec1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027482">
        <property type="entry name" value="Sec1-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036045">
        <property type="entry name" value="Sec1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11679">
        <property type="entry name" value="VESICLE PROTEIN SORTING-ASSOCIATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00995">
        <property type="entry name" value="Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56815">
        <property type="entry name" value="Sec1/munc18-like (SM) proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30286" checksum="4E3F08588A4585E0" modified="2025-10-08" version="1" fragment="single">MSAGLKETVYDFLRYNMIEPCCGDKKDYVALITDQSTLQMISSVCSVHDINLAGVGVVLNLKFKRDQMPVSAIYFVNPTPKNVRKICNDFTKKRSMYRKVHLFFNGHVSGESMEMIRRNTRLVEKLSTLKEVNIHFFVEEDRVFSLRRASLQTMYPISKKRTAKELKDIAKGLASLCLTMNEFPYVRYMKSSECCENIARYFNDKIDSKIRKLSDWEYREKRAILLILDRNYDKVSPLMHEYTYKAMVADLLTLDKNFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB3</accession>
    <name>A0ABV2AJB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001177</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000257">
        <property type="protein sequence ID" value="MES1919327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="18324" checksum="09FB48CCBC44E4B3" modified="2025-10-08" version="1" fragment="single">MSSDDEQLKFYNPDSDSFESDGYFEENKDSNRIPEQYDQRGSKPLNDNRQDWQMHENRFSLAHPNQHRFPLESENRPKQQSHVVHGTQIPSTKGMNEMRNNERISELNKNEERFLSENVQNKFKENLTEKGRYRGIANNQFQPSVNQMPQQHKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC6</accession>
    <name>A0ABV2AJC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000395">
        <property type="protein sequence ID" value="MES1919772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12793" checksum="691522A4C622E03F" modified="2025-10-08" version="1">MVEKLTENNAVSYYIGLEAGRDASLFKKMALLPKYMPLTAASTIVFFPFVLFRKKNTPQFDPVRILMYSSILSSIAWYTFRYEKKFRDEHNMSFMKMRKKQKKGEEID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ6</accession>
    <name>A0ABV2AJQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribosomal protein L12, L11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rpl12</name>
        <name evidence="7" type="ORF">MHBO_001479</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000368">
        <property type="protein sequence ID" value="MES1919694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00349">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.250">
        <property type="entry name" value="Ribosomal protein L11, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1550.10">
        <property type="entry name" value="Ribosomal protein L11/L12, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00736">
        <property type="entry name" value="Ribosomal_uL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000911">
        <property type="entry name" value="Ribosomal_uL11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020783">
        <property type="entry name" value="Ribosomal_uL11_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036769">
        <property type="entry name" value="Ribosomal_uL11_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020785">
        <property type="entry name" value="Ribosomal_uL11_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020784">
        <property type="entry name" value="Ribosomal_uL11_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036796">
        <property type="entry name" value="Ribosomal_uL11_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11661">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11661:SF2">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00298">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03946">
        <property type="entry name" value="Ribosomal_L11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00649">
        <property type="entry name" value="RL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54747">
        <property type="entry name" value="Ribosomal L11/L12e N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46906">
        <property type="entry name" value="Ribosomal protein L11, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00359">
        <property type="entry name" value="RIBOSOMAL_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL11 N-terminal" evidence="6">
        <location>
            <begin position="9"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="Large ribosomal subunit protein uL11 C-terminal" evidence="5">
        <location>
            <begin position="69"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="17637" checksum="B867DD5233B780C9" modified="2025-10-08" version="1">MSDSPVTFKLRCIGGAKVAPAKIAPRVSPLGMGPNQVIEKITKSTADYKGLPVIVEISILNRQAEIKVIPSASMLILKALDEPLRNRKEEKNIKHDGNITMEQLYEIARVVREKSLAKQFSGTVKEVLGTCLSLGCRVENESPRDITKRIKKGDIVCPEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK04</accession>
    <name>A0ABV2AK04_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CBS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001741</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000477">
        <property type="protein sequence ID" value="MES1920011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02205">
        <property type="entry name" value="CBS_pair_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051257">
        <property type="entry name" value="Diverse_CBS-Domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43080:SF2">
        <property type="entry name" value="CBS DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43080">
        <property type="entry name" value="CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0129">CBS domain</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="106"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18502" checksum="8ED6077E1ADCDF6D" modified="2025-10-08" version="1">MITPLDVIKGLTDIEMNKSQNVTAKRVLEIMKIQPENEETPMNNMFSIDESKPVLDALRLMIRTHANKFIATKDGKFKGLFTTRQYCRKMGLKRKNPENVKVGDVVETAAVFVKPEDTISKCFKLFMENKLVRNLIVSNSKNAEDILGIISSRDCLRCLYTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK39</accession>
    <name>A0ABV2AK39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001769</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000488">
        <property type="protein sequence ID" value="MES1920043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23772" checksum="4EE9BA2DF8A10DEC" modified="2025-10-08" version="1" fragment="single">MNDVVTGVSLSYFDEYLRDLKRAECISTECIEHRFFTQFGENQFPELHITAQSGNLVVTSLRDKYLTLHSIDVRNLRDKNISSLIISENNKSIMMTIVRAKSEQLQQFNEIRLGTEHLHKFYVSYLDWEPQNFVDRGQNVRTFHFPVLPEMFDPEFTTQFGYKIAKFGKNVESFMSRFPMTKFGLNADEASSLHLIPSTSANPPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK93</accession>
    <name>A0ABV2AK93_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001641</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000435">
        <property type="protein sequence ID" value="MES1919889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="342"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="348"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="387" mass="46065" checksum="0257B4EE0BD30359" modified="2025-10-08" version="1">MLVAQKSDVIQSILDYIGEIIAFKSVKHAKMKWNRLEKPILLLNEITKLIFYGLKISDEQKNEEIYEKYFLMLKTLMKNFVVFDYSRFLLREYKETLNSIDYLKTLIELNHFLICLGKMVSDEENDNFAISAFLSTNSSIFQNNQNLAKQTKNSDLNKFLTKIPKFEVISNKNFERKISLFCHINIIWNYMKLLNFKKKNSDKILLNFFLLIADGLNKKAIFYRPLYIQKFQVLLSRKDVVFGEFAKNIIDSLFSDLKKYPFLVVEMLFGINKRKATKIENNDFEETDSEQIANEDEFLFIDQNFPKKDEQIYEDSDQDFNLKFVRKLKKIKNLNEDNKNLNENNKYLNEDNKNLNENNKELDESNGDNEKIFFIEDESEKNEIEFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC3</accession>
    <name>A0ABV2AKC3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphoglycerate mutase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001842</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000521">
        <property type="protein sequence ID" value="MES1920126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003094">
        <property type="entry name" value="6Pfruct_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10606:SF44">
        <property type="entry name" value="6-PHOSPHOFRUCTO 2-KINASE_FRUCTOSE 2,6-BISPHOSPHATASE LONG FORM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10606">
        <property type="entry name" value="6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="91" mass="10546" checksum="A9936F7636AFE8AE" modified="2025-10-08" version="1">MDGVVRAESIVIDLEQTSTPVLIITHVSMMRILYAYFKSIPVDTVTDLNFPQGLVVEFKPRSFQKLNFDSANISKTTKFNFKFIWMARRKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF5</accession>
    <name>A0ABV2AKF5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aminoacyl-tRNA synthetase class Ia domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001859</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000530">
        <property type="protein sequence ID" value="MES1920149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023586">
        <property type="entry name" value="Ile-tRNA-ligase_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42780:SF1">
        <property type="entry name" value="ISOLEUCINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42780">
        <property type="entry name" value="SOLEUCYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-tRNA synthetase class Ia" evidence="6">
        <location>
            <begin position="27"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11537" checksum="6572077A1F816168" modified="2025-10-08" version="1" fragment="single">MSTKTVQKFTFDPIPSTVSFPKIELEILSYWKRINAFKRSLELSKGRKPFSFYDGPPFATGLPHYGHILAGTIKDVVTRYASQTGHHVERRFGWDTHGLPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP3</accession>
    <name>A0ABV2AKP3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">VWFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000563">
        <property type="protein sequence ID" value="MES1920233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="1">
        <location>
            <begin position="9"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21230" checksum="5F489D08BBBA33E3" modified="2025-10-08" version="1">MPVSNCIFNLAICIDSSGDTQIDGIFEFEKYLAVQYNNNVTFTSQEKFIDTMVNGFATYVENYVPYGNYATTEEVNGAIMDASPLKDSAGTQIGGCMHDVYTRSAGNLPIVVFILIDGDPNGDSYNLTEISWLMRENSFMIQAGGFSSVSSDILTDITGDPDLFVYGTKVQELDFLIDYLTNDICELRFWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP4</accession>
    <name>A0ABV2AKP4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001922</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000562">
        <property type="protein sequence ID" value="MES1920230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLH" evidence="1">
        <location>
            <begin position="135"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="22096" checksum="175B30891A89489C" modified="2025-10-08" version="1">MGDGADNDGTPVPTIMTGTYDLHSCYHLGKYRAFELKEPGKESVPVIRKTGISTSNYINVHGRDMIDKNPTSTGCITILRNEFHKILLTVGLESSDFANRKRQGAMVIDRSYISKKCQNYYKALYGEYYKYCFNTPEPVFTDIESHWCERIVISLKEKGIINGYPDGTMRPDQQPTRAEVFAIANNIIKYMEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS9</accession>
    <name>A0ABV2AKS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001969</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000585">
        <property type="protein sequence ID" value="MES1920283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047379177" description="Secreted protein" evidence="1">
        <location>
            <begin position="18"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="106" mass="12502" checksum="FF2332FFAE6E3F19" modified="2025-10-08" version="1">MLLLLSIFLGFCLNCQVNDIHFLQRRRMMAIFLDEPSYPLSFIRAQYRMAADFGETPIMTYFCYPMLIALDPFYEITFAQGFSLCSNSLWEPLPACYRIIRLVVMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKZ3</accession>
    <name>A0ABV2AKZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001786</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000498">
        <property type="protein sequence ID" value="MES1920063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13367" checksum="B2B4611BA0514E0C" modified="2025-10-08" version="1">MNSESKEYIKRCFKKIKIGKNVDDSVLNYLSHVLDKLIQENLAKCSNLCAISGKSEIDANIINYFDEKLNKTDNGLFLEIADEINKRPIESLPRGVGPFLPDFNTANWNYDLVKINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL27</accession>
    <name>A0ABV2AL27_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001721</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000469">
        <property type="protein sequence ID" value="MES1919987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="55"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23158" checksum="1DB1CEDEA084073B" modified="2025-10-08" version="1">MDNFVQTENADSDDKSAKFDTLKARKKVVTEKANANIKETKRGLTNLAPYFSQMIDLLESSGEVLELQLKEMKETEKDIESLMSQRENLIKKLGTIEKEIDSSQNDFMEQIQNYRQRTQDINTLQSKVEEIIEEVKTKLVLPDEILTDCLTTTINDKSTTSTNNEYSTDDSSHVCENCSEKIFSCANNESKKCFQSSSTYTNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL60</accession>
    <name>A0ABV2AL60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000552">
        <property type="protein sequence ID" value="MES1920214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="147"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="27"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="248" mass="29333" checksum="59608BD27BB52D76" modified="2025-10-08" version="1" fragment="single">MTNDNKTDQRIEFSGKKDRSEGETERPQTSQDNSQNSETTNKSFSNSQENSEEQIFRKIIFERKQRKIDFLKFDAQQNYLWNQYNLAVSEKNRQIYETVSNIKHAKEALFENLNFSSDSTIVSKAISWYKNTLLKEISNNSSNLKKIDFLQTEIKEKQESLNFNNKKIDQKTKEIKDLIEKHQKKIEENEVKIKLLNDMKKKSEIDYNAKLQKLQNKINLDMKESEEKIAKAAKEKQSENLLHKRKLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI7</accession>
    <name>A0ABV2ALI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PHD finger protein 20</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PHF20</name>
        <name evidence="2" type="ORF">MHBO_002196</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000723">
        <property type="protein sequence ID" value="MES1920533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd20104">
        <property type="entry name" value="MBT_PHF20L1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001660">
        <property type="entry name" value="SAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00536">
        <property type="entry name" value="SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00454">
        <property type="entry name" value="SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47769">
        <property type="entry name" value="SAM/Pointed domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50105">
        <property type="entry name" value="SAM_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAM" evidence="1">
        <location>
            <begin position="31"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="377" mass="44100" checksum="B2B8539B6C38E7CE" modified="2025-10-08" version="1">MAGKFLKTVGISKLPRKFQPKNEVDLTIRNWPVSTVLKWLAHNDLAKYIPVFQINDIDGYLLLRIDEDVLQNDFDLKKNEHYDKLVKVIQSVQKDNFTRKIGKSERTKESKQALRFSWGETVQIGTKIDCKDCIGNWSKAIVISINSERGEIMVNYLSSHSKWDEWISVFSDRFTPFLEKTEQTPLNSFKEAVARENEEMVATKEILSKLRSNNLSSLTYFSAYTPKSIKHAVSDDELFRLLKCFIKARGTVSAEMLEELGIGRYRAEKCYQDFLAKYVNGETMEPPSIEENIVKQKPPIFVEKKRKRSRRTTAMLTEDWREGNRKGLWKCPKCQVVLTAQKRYTHPCFRDNMLTIEQYNQSLSENQYRSEYLSRFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM8</accession>
    <name>A0ABV2ALM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002237</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000748">
        <property type="protein sequence ID" value="MES1920580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17941" checksum="BD14F5E9CF0164AF" modified="2025-10-08" version="1">MDEYTESELQNIFSEASHYLEVPNHYEDNESVILDNENDDTRFLKKNRDKINEINEVFEEYNQKYWTIEDPKSQEFTGTGSSTTRYQLNNGEMDILQAHSQFEFVPDPNGFQNVNVSGQYNYESLYQEIDNSISGDHEIELSIDNSINVLLYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ0</accession>
    <name>A0ABV2ALQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">YhhN-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000751">
        <property type="protein sequence ID" value="MES1920584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="210" mass="23749" checksum="628DA4BD1081DE1D" modified="2025-10-08" version="1">MRTDGLILAVISLVFALFALLYGIAVHLKEKDESIKEVFIFFIALNLFASFGIWMKKAFSGDLPFEAEPILMFLPIVALTLLYLNWIKTFNFAVNVFVLIAFFGLIVDMILIIVHSDPFFVGMHIIPVICLVYVVARVYYSDRNLKDYLFRFNIALTFQMITYATSCAVKVYVDKGSYKTTNVVSGGIFLATNVPILLSFVAAEVTKIMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR5</accession>
    <name>A0ABV2ALR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002251</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000756">
        <property type="protein sequence ID" value="MES1920599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7170" checksum="DFDCC3C3993C53FE" modified="2025-10-08" version="1">MKSNGIVPFASHFPRPANPDAPDAPALREHLVVPAKAYVALVVQEVLVVSVESQECQDVVVPVGHED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU3</accession>
    <name>A0ABV2ALU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002282</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000777">
        <property type="protein sequence ID" value="MES1920629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="16349" checksum="059D42F124505AF6" modified="2025-10-08" version="1">MAEKDKKDEESDKNRAHTNEQMPKLPKKLNFEEKKKSPSKSLSELFEIYTNSEKSNFAFEDVYVNHILKKVGCICEDKKLRIFIGLIVQQIVCTVLKDCRSFEKHFQTKESFEDSQNLTFKSLQFVIKQNGLDLNKYFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM52</accession>
    <name>A0ABV2AM52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002133</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000687">
        <property type="protein sequence ID" value="MES1920468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12430" checksum="A8F0119F7BF8DEBA" modified="2025-10-08" version="1" fragment="single">RKKILGKNESEEENEDFGEVIDQKIGKGIIDEETGVCYIPNEKKNWFQSNSIEPSCFFRGEGQSLGNVRFSKKMNEKLKFKNVDKKVEKEISNLEKKRRKRKFGKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM74</accession>
    <name>A0ABV2AM74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002411</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the alpha-ketoglutarate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000858">
        <property type="protein sequence ID" value="MES1920773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11610">
        <property type="entry name" value="Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011603">
        <property type="entry name" value="2oxoglutarate_DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042179">
        <property type="entry name" value="KGD_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031717">
        <property type="entry name" value="ODO-1/KGD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23152:SF4">
        <property type="entry name" value="2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23152">
        <property type="entry name" value="2-OXOGLUTARATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16870">
        <property type="entry name" value="OxoGdeHyase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Transketolase-like pyrimidine-binding" evidence="5">
        <location>
            <begin position="7"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="2-oxoglutarate dehydrogenase E1 component/KDG C-terminal" evidence="6">
        <location>
            <begin position="50"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="23371" checksum="A920AED35580E57D" modified="2025-10-08" version="1" fragment="single">IRVQNCNWQIVNCSTPANYFHVLRRQFHRSFRKPLIVFSPKSLLKLRECKSSFQDFKENTKFKWLLEEREELVEDDKVKKLILCSGKVYFDLVKERSRLRIKNVAIVTLEQLCPFPFKEVVSQFKRYKNAKISWVQEEPMNMGAYSFVLQRLHAILKSLKQSNIEIAYAGRPPSASSATGFGMKEHAIEMKSFLKKAFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM82</accession>
    <name>A0ABV2AM82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002413</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000859">
        <property type="protein sequence ID" value="MES1920776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046868533" description="ATP synthase F0 subunit 8" evidence="2">
        <location>
            <begin position="23"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="137" mass="16253" checksum="B715BD957E013FCC" modified="2025-10-08" version="1">MYTFPIWIILSLSLSFFPFVGENYGCTHHALREPVVWFTALFSAIFCCLPRLLLNFFRRYNRPSHLDIAIEIDDIDAEKIDLESSELTINQNITDFEMQITKKDKTKGYDDYYRNSEKNSWRDFVKSRLLEPIVKVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM8</accession>
    <name>A0ABV2AMM8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase</fullName>
            <ecNumber evidence="7">2.7.8.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">PGS1</name>
        <name evidence="8" type="ORF">MHBO_002531</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a CDP-1,2-diacyl-sn-glycerol + sn-glycerol 3-phosphate = a 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycero-3'-phosphate) + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12593"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:60110"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="2.7.8.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Phospholipid metabolism; phosphatidylglycerol biosynthesis; phosphatidylglycerol from CDP-diacylglycerol: step 1/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the CDP-alcohol phosphatidyltransferase class-II family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.5" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000957">
        <property type="protein sequence ID" value="MES1920923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008444">
        <property type="term" value="F:CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.870.10">
        <property type="entry name" value="Endonuclease Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016270">
        <property type="entry name" value="PGS1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12586:SF1">
        <property type="entry name" value="CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12586">
        <property type="entry name" value="CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56024">
        <property type="entry name" value="Phospholipase D/nuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="4 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 7 8" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18459" checksum="5FB54BB79818B7E4" modified="2025-10-08" version="1">MAKFYSNGVRLPVFSVNSKNIRILRSPSDFYRNLLELTKTARSRISLSSLYIGNDMMSKEMVSKAVLNKRENPGLKLNVVLDFYRATRDFKNSSVQTLKPLINMKSVFSHIDICLFLNPKHNILSGYLPERVKEIFGVQHSKIYAFDDNVILSGFFLRFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMP3</accession>
    <name>A0ABV2AMP3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Alkyl transferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002420</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000862">
        <property type="protein sequence ID" value="MES1920784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="entry name" value="Decaprenyl diphosphate synthase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001441">
        <property type="entry name" value="UPP_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291:SF43">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE COMPLEX SUBUNIT DHDDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01255">
        <property type="entry name" value="Prenyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="Undecaprenyl diphosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="150" mass="17221" checksum="A2E2D323EE079879" modified="2025-10-08" version="1" fragment="single">MSQLLLKTFLSLFSDFPDHIAFILDGNRRFALKNGMSKIDGHKKGFNNLINLEIDYLMKMLNDKIDLKGNFIWNDQSLAKNFNNKNAGIRFIGDFSKCPKNLQRKLKMANENCGKTKFDILLNVCFSYCSDDEATFASLKLKNGFFANRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR3</accession>
    <name>A0ABV2AMR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002538</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000964">
        <property type="protein sequence ID" value="MES1920930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044978">
        <property type="entry name" value="GRV2/DNAJC13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36983">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36983:SF2">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="626" mass="72116" checksum="65781DFA8E310870" modified="2025-10-08" version="1">MKLLIFAAMSSESDSENVKLFIQLFEQILNYSNKTTFFRNKGIDFINDQLEKSTKFYTKQYKQNENPEKLKKQNEKTEKLILLLVKIIDSSDAIKNHLRESQTFFALIPLLAVENLKVRKAAFDFFVPLMNSSHHTFPNLASTGFFVFTANHLFRPESDAQTLIPILKFSHRKQREEQILVSNGSALGAMFPEPVVNLIDSSSTEKAVSVFDADSKINRPDVLWTENMKKRLKTTLEKWTDEYFLKLKDDFGLVKSPEKIFAKICENGVTYKECEDNISISGIYLKSFLESENCKIENSEQFLDQILANLAGNGEKLSDKTIFILCVHKIAENYSNLPKIINFEHFKDLKSDFDFNLINKKLQKNCVFVDEKTKVVKCALDLVDFLFSLSEQNRKSDGASDFVNAVVALSRKLLGKNGLNKLENGVLAVLVDFLTVAIKKYDQIAVAIQREENKFLEAVQKHLIKATDKSLKNNENTKKLTNFLIKMSDFLPLRTSQFEKGIPILVLNIIVNETMSDDVSEILSEYFSHFLVESPFIDFGIDNGKTRYNSKEKTIENWRMFQKTIFDIFSDFLSKGILDKIIEGQLFSKIWNKNFVTPFLIWSEEDSQTLKNRIFVGTDNIRFNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI7</accession>
    <name>A0ABV2ANI7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UBC core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002793</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001174">
        <property type="protein sequence ID" value="MES1921235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBC core" evidence="1">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="7908" checksum="F747E87EA69517EE" modified="2025-10-08" version="1">MEDGGKLCDSIINGSWKPTLSIADLIEKIEQILINPPPDAILDEEIGGLYATNRNKFYKNAKKWVKKYAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR5</accession>
    <name>A0ABV2ANR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002838</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001218">
        <property type="protein sequence ID" value="MES1921288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="192"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="197"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24847" checksum="6DB5A6BC9B6C63CF" modified="2025-10-08" version="1">MQIARALEKMTTADFRRIEKATLDFSPYYEAEKNACRRCNDAAKEFRSFKSENLRSSVECAREIRRAKRVLLNARTKSVRARAEVKLEHFQRIEADLNARAQKLFEEERKAKNALDRAHFESFGERKKVYHSEMNVHMIADERFRKLAFVDVGEKRLGERGAERVAVSLGEDGELRYHAFVRGHRYAKVPTAPESAAAHKETRPAEDWRTEFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX5</accession>
    <name>A0ABV2ANX5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mago nashi</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002913</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the mago nashi family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001295">
        <property type="protein sequence ID" value="MES1921381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1560.10">
        <property type="entry name" value="Mago nashi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004023">
        <property type="entry name" value="Mago_nashi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036605">
        <property type="entry name" value="Mago_nashi_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12638:SF0">
        <property type="entry name" value="MAGO HOMOLOG, EXON JUNCTION COMPLEX SUBUNIT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12638">
        <property type="entry name" value="PROTEIN MAGO NASHI HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02792">
        <property type="entry name" value="Mago_nashi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89817">
        <property type="entry name" value="Mago nashi protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="152" mass="17821" checksum="438644EFDB70D932" modified="2025-10-08" version="1">MSATDERFYIRYCIGHKGKFGTEYLEFKIDDSGRLTYINTSDYKREIYIFKELYLSRHLLDEIMNIVRESDIVNQNDENWPKPDFTGKQEIEIVDGQYHISFVTTKIGSLSEIETSRDPDGLKKLHFLVLDLKSIVFDIISLHLRIKPILAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ8</accession>
    <name>A0ABV2ANZ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transcription elongation factor 1 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002934</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the ELOF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001315">
        <property type="protein sequence ID" value="MES1921403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007808">
        <property type="entry name" value="Elf1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038567">
        <property type="entry name" value="T_Elf1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20934">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20934:SF0">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05129">
        <property type="entry name" value="Zn_ribbon_Elf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57783">
        <property type="entry name" value="Zinc beta-ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="5" id="KW-0863">Zinc-finger</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="83"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="83"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="130"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15622" checksum="4CFD11C14AE7DA60" modified="2025-10-08" version="1">MVSRKVRKKPIKKVKQKVPNVFDCPFCGHSNVVECKIDKKKMEGKVSCRVCDAGYTMNTNNLTDPVDVFCEWVDKCHKNSNLKRKEPEPLEFNEKEENDETKNVEGDLGKPDKNSGSSDSESSAVFVNDSSDDSSDSIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC0</accession>
    <name>A0ABV2APC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003054</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001444">
        <property type="protein sequence ID" value="MES1921527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="346" mass="40485" checksum="1005A09503757C82" modified="2025-10-08" version="1">MKSKDAEMSMASAKILVEYVKFSPDIDIVKFYENLLKQNMSIKSALLFLENCLNFLDEKSDLIKSDLITLFWKFNEIDFKANFSAQLYDFVDFVLILIKNCNNDKTLFFKILNCFQFNGNGSTVSETKNYRILLCAIIKLFIVISAKCPNENYSEFYKLFLFQSNKLENKNINFGLFCENSRCEFYNVLYVTAVIKAIFLHKNRRKWLRIAESHLSESFGSQFDIAKILMGDDKMLSTSMREISRITVAEFKGGFRMSPLNPFKIYIRFFELGGIGCFLDLLMEQTLFLEAVLLILRLRKSSNLIEDFSEFKDFDYVCDNLREKLLKVRKGFPYSIEILLERLKST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG9</accession>
    <name>A0ABV2APG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003104</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001496">
        <property type="protein sequence ID" value="MES1921572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12971" checksum="AB705FBFF1FAA409" modified="2025-10-08" version="1">MDKIENLVHKIAAIRNATGEIKFEPISEQKYSDYLSKFSILLNDLDELKKVKAISDFTVVPRVSDFPVNFFYGENGKSCEDLRISNSDFEHDNVEEIIESFNKMVESILGSFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APH7</accession>
    <name>A0ABV2APH7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Guanine nucleotide-binding protein subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">GPA1_2</name>
        <name evidence="5" type="ORF">MHBO_003106</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001498">
        <property type="protein sequence ID" value="MES1921574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF302">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-5 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0807">Transducer</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="7888" checksum="12E4081038F44B4C" modified="2025-10-08" version="1">MFDDYTGPEKDFKSATDFVKKKFIELNNAKGKEIYTHVTCATNNSNIKHVMAAVTDVFIKKKLAKGGLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK0</accession>
    <name>A0ABV2APK0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Histidine kinase/HSP90-like ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003121</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001523">
        <property type="protein sequence ID" value="MES1921590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020575">
        <property type="entry name" value="Hsp90_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13589">
        <property type="entry name" value="HATPase_c_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00775">
        <property type="entry name" value="HEATSHOCK90"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="131" mass="14595" checksum="15BFFEC707165740" modified="2025-10-08" version="1">MVAVNESVKGERYAFSADINNLLGLIINTFYSNNDVFLRELISNSSDAIDKIKFKSLTDSSVLGDETEFKIQIVPNKEAKTLTIRDNGIGMTKDEMVKNLGTIATSGTKAFMDTKQLIFLLKFNTKNLFSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL4</accession>
    <name>A0ABV2APL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003144</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001557">
        <property type="protein sequence ID" value="MES1921617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20519" checksum="029A99C9644B3B9D" modified="2025-10-08" version="1" fragment="single">IIKVADIINEHVNWPLIPKPGIKALLENGVNSLYSLKRFKNWEKLPFSEYRKSEIQKCVLKMGNGRRVDDESPFDFMQKYRKNGLDKSDSRIVDLTFDVKALSDEELLRSFELGYPIRRELDREETFNLMKRRFEKIETISKPHIAKIENEKEKVDEDGFIKRRNILIEDESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN6</accession>
    <name>A0ABV2APN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001580">
        <property type="protein sequence ID" value="MES1921642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045650252" evidence="1">
        <location>
            <begin position="21"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="254" mass="29397" checksum="6AA9479199F0A885" modified="2025-10-08" version="1">MARIASIWLIALAITVNSAASKGHYHDKNYFGRFEDLDRPGKTGKIILSFHSKAVSGVRYFKGRAVILRGSIVENLGLDTYGWLSGDKALLFTDKKFVWDNISPPNRFEVLNFYGFGSSGLATHYPAVFCNYRFELFFRGKIPEPSAKRLFVEEDRRRRDGQQLHSRQVPRELFQPQHQRLDTGLRGLLQTGQRVHRSDDTRQLCADLPSVPTNWLFEHNRAHFEAKLLHVHVLRRERLLHHNGARVRGRHIPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ5</accession>
    <name>A0ABV2APQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA polymerase zeta</fullName>
            <ecNumber evidence="3">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">REV3_1</name>
        <name evidence="3" type="ORF">MHBO_003189</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001598">
        <property type="protein sequence ID" value="MES1921660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.342.10">
        <property type="entry name" value="DNA Polymerase, chain B, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056435">
        <property type="entry name" value="DPOD/Z_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030559">
        <property type="entry name" value="PolZ_Rev3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45812">
        <property type="entry name" value="DNA POLYMERASE ZETA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45812:SF1">
        <property type="entry name" value="DNA POLYMERASE ZETA CATALYTIC SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24055">
        <property type="entry name" value="POL3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA polymerase delta/zeta catalytic subunit N-terminal" evidence="2">
        <location>
            <begin position="6"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00049244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF24055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="245" mass="28516" checksum="D26E69059CFFFD86" modified="2025-10-08" version="1" fragment="single">GEMINDETANDFARNLNKALKTSFSADKELNICKNFINKLTIFRAKSIYGFNKKSDFLKIEFVNTKITKKIEHLYENNNIQENWTLFESHIDFELKFLIDFGLSGFSNISLNNFSFRCPLPKSKNPSTKKWDEGNIKAVERKNGLKKTTFCELEIDTDANLLKRKSFDCKEFSNVINSDQLLVETLKNSHFPNRFTQRKKLTNTQHFEKIKKILAKEYNSLSQISLNGNSKFSGKMANYNDEFIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APQ6</accession>
    <name>A0ABV2APQ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal protein S8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003185</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001591">
        <property type="protein sequence ID" value="MES1921655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000630">
        <property type="entry name" value="Ribosomal_uS8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035987">
        <property type="entry name" value="Ribosomal_uS8_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11758">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S15A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00410">
        <property type="entry name" value="Ribosomal_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56047">
        <property type="entry name" value="Ribosomal protein S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="18971" checksum="F8CFA54747DF619D" modified="2025-10-08" version="1">MFFLLRHSPKTLDCHHIFFKTFSVVAHRPKRYRVKRHHNTPASLSTTLRNAYKRKLALAYFPNSNLACGILDVLINEGYINGFRLQPELKRLTIYLKYSGHSGLAAVQEITTVSKPSNRVFKKAHQIRPFMNGLGIYVVKTIRGVKSCKECWEKNIGGEVMFSVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS3</accession>
    <name>A0ABV2APS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003192</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001605">
        <property type="protein sequence ID" value="MES1921663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="12577" checksum="1F55A13C8859415B" modified="2025-10-08" version="1">MVHKFFNLAVALTTYLFLWLFKLFRVFVLLVVLGLLVLYIYQRRFIYIPENSALEGRQINFNEKLFQKPELWGFSQYEDIYLKSFDGALLHCWHMKFVRRTLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU2</accession>
    <name>A0ABV2APU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA primase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003226</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001643">
        <property type="protein sequence ID" value="MES1921696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.580.10">
        <property type="entry name" value="Zinc finger, CHC2-type domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036977">
        <property type="entry name" value="DNA_primase_Znf_CHC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027032">
        <property type="entry name" value="Twinkle-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12873">
        <property type="entry name" value="T7-LIKE MITOCHONDRIAL DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12873:SF0">
        <property type="entry name" value="TWINKLE MTDNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56731">
        <property type="entry name" value="DNA primase core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57783">
        <property type="entry name" value="Zinc beta-ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="290" mass="34359" checksum="2B2C3D53FD40D10B" modified="2025-10-08" version="1">MLRGIKTLCSIRSARIYRKSRKTKLKALKIRYFTEQIFLEDEIKADLNDEEQFEDFSKTIVDLCLQKKKDFRETPLFYKLKYCPTCPPHNDKNSNLYKLIIWKSSGGFYCHRCNNKGGYMKFRAMMDREPTYTKITRNLLEDEKKKKFAMKSKSEELRPKMLQILEKARLSEKNKNFFEQILEKRGITKETLKKFNSGVIHWSFYTDDGFKRKPAIVFPWYVTNTNYSTKVLQRIKLRGLEEKSDQTIYPSGGSWGFFGLNTIKEKDKSIVITEGEYDAMAVYQVMFVDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ9</accession>
    <name>A0ABV2APZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001723">
        <property type="protein sequence ID" value="MES1921756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7482" checksum="BDA23F28BA93CB9F" modified="2025-10-08" version="1">MEYFEIMNAQFSSKPEDLGQVGDEGFCLKFKFCISDTLGTFYLHIDIAGQIDIPRQNKSLFELKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ33</accession>
    <name>A0ABV2AQ33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003099</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001490">
        <property type="protein sequence ID" value="MES1921566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10286" checksum="E6745C716F516CE1" modified="2025-10-08" version="1" fragment="single">TWFQQQVYFSKRVFFSSTVGSEDYGCDTGAIVRCNLLGSTPSKPCCLWHPLFSSLFLKTHSISISACWDFFNFPLNDTQSTFLIFLLKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ76</accession>
    <name>A0ABV2AQ76_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001807">
        <property type="protein sequence ID" value="MES1921815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="55"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="164"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="261" mass="31360" checksum="55608A4FEABFEDF8" modified="2025-10-08" version="1">MLIRFGQNQKFGYFWTLESIYKKQLEITEDCDIDGSSFPKEISIKAVEKSENKSISDILKLKNDYEEKLEKLMIENILFRDKIRNLDNQNFLSENKEKSNCEKVKSDRPKENFDKNMEILKKENSELKNEIIKLRKEQIADRKNASRMEFDYSQKFKNNIFLSLDQFKEINKEKEETIENLKKKEQSLKELQLKYEEMINKKNDEIRKMASKIEQWNDKNIQTDSNDIDENKIKKSEEEKKIMELIDEKRGPGQFEKTQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF2</accession>
    <name>A0ABV2AQF2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">E3 ubiquitin-protein ligase listerin</fullName>
            <ecNumber evidence="1">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">RING-type E3 ubiquitin transferase listerin</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003305</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">E3 ubiquitin-protein ligase. Component of the ribosome quality control complex (RQC), a ribosome-associated complex that mediates ubiquitination and extraction of incompletely synthesized nascent chains for proteasomal degradation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the ribosome quality control complex (RQC).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the LTN1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001749">
        <property type="protein sequence ID" value="MES1921774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039795">
        <property type="entry name" value="LTN1/Rkr1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024991">
        <property type="entry name" value="RING-H2_APC11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12389:SF0">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE LISTERIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12389">
        <property type="entry name" value="ZINC FINGER PROTEIN 294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12861">
        <property type="entry name" value="zf-ANAPC11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Anaphase-promoting complex subunit 11 RING-H2 finger" evidence="2">
        <location>
            <begin position="19"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="6274" checksum="37D0C5A970D69192" modified="2025-10-08" version="1" fragment="single">CYSIVHGSTREVPRLNCRTCSARFHSACLFKWFARKGEQECPMCRSNFFVKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH9</accession>
    <name>A0ABV2AQH9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Condensin complex subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003338</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001792">
        <property type="protein sequence ID" value="MES1921804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027165">
        <property type="entry name" value="CND3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14418:SF5">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14418">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="358" mass="40961" checksum="A778C67BEEE7B78B" modified="2025-10-08" version="1" fragment="single">FCLKFTKCSNKTPKLRSLELIGVVLNDLPDDFALSETVYNALFKSVYPLLKDPLDTVRLQAIASLSRLQQPQDPNDKITSRLNKMLTGDPSKKVREACLRNIGIINKTLPDVLTRTRDSSELVRRSAYTLMKEKLGIKSLSISQRNNVLRNGLRDRNEDVRKECSDMLLNFWLPSCGSVLEFLSLIDVEENETDATIITEHIAEKHEMDTKSNPPFTGEVDNEKAFLWKIICAQINKQKPINWTKLDSVLINPRDFAKTLEDNISNHFIFKQLLGICKYLDFKDESNRNFIIDKASCKILNLETFLINLNVSNEFVALVTDITRPIFRSESDHAKSIVKIILKLLENFESDSKHVAKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ8</accession>
    <name>A0ABV2AQJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003476</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001980">
        <property type="protein sequence ID" value="MES1921951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="18674" checksum="CABE87F7FFBC008D" modified="2025-10-08" version="1" fragment="single">LQSSAPVPNTSNNNNEPVSDISTSSNAPVLDISTSNDEPVLDISTSSNAPDFDISTSSNEPVPNTSNNSNKPVSYISTSSNAPLLDISTSNNEPVSDTSASSNEPVSDISTSRNELVSDISTNSNAPVSDTSVSSYEPVSDISTKSNTPVSDTSTNSNEPVSDTNTSSNAPVSDISTNSNAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR35</accession>
    <name>A0ABV2AR35_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Prokaryotic-type class I peptide chain release factors domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003645</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002259">
        <property type="protein sequence ID" value="MES1922130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052405">
        <property type="entry name" value="Mito_Transl_Release_Factor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46203:SF1">
        <property type="entry name" value="MITOCHONDRIAL TRANSLATION RELEASE FACTOR IN RESCUE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46203">
        <property type="entry name" value="PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="Release factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Prokaryotic-type class I peptide chain release factors" evidence="6">
        <location>
            <begin position="24"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="109"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14904" checksum="3D69CBC48149525A" modified="2025-10-08" version="1">MISIRMIKNKTIHLNLKRSFGQSFKIYEEEVSEIFQRGSGNGGRKVDSQSNCVILKHNPTGITVRCQKTRLLQKNREIARNKLADLVDFFVNKEKSKIAIAKKRRALKKAAKRRKQIRSGKYPNMTKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD9</accession>
    <name>A0ABV2ARD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Structural constituent of ribosome</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPS0</name>
        <name evidence="4" type="ORF">MHBO_003740</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002436">
        <property type="protein sequence ID" value="MES1922231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01425">
        <property type="entry name" value="RPS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10490">
        <property type="entry name" value="Glucose-6-phosphate isomerase like protein, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001865">
        <property type="entry name" value="Ribosomal_uS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005707">
        <property type="entry name" value="Ribosomal_uS2_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023591">
        <property type="entry name" value="Ribosomal_uS2_flav_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11489">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN SA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00318">
        <property type="entry name" value="Ribosomal_S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00395">
        <property type="entry name" value="RIBOSOMALS2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52313">
        <property type="entry name" value="Ribosomal protein S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14284" checksum="6F7020D44BE06393" modified="2025-10-08" version="1" fragment="single">MSSNPTKEDLSLLLKADCHIGAKTLTKKMAPYIFKKATDGKSHIIDLHKTWQKIHAAALLLVAVKNPKDICLVSSTNWGKRSIFKFSQYAKAHSISGRFTPGTFTNQICKSFREPSVLIVCDPELDNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF6</accession>
    <name>A0ABV2ARF6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003633</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002242">
        <property type="protein sequence ID" value="MES1922119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="66" mass="7493" checksum="BC298E453E52E62D" modified="2025-10-08" version="1">MKVYGIHKGRITGFKKISNKHEEPVSTVSRICNCVGKADSMVLENSIEKKKEKIQIFIADYAPRKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK4</accession>
    <name>A0ABV2ARK4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003814</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002558">
        <property type="protein sequence ID" value="MES1922307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7452" checksum="F23D00B08EF06BFF" modified="2025-10-08" version="1" fragment="single">IRYSNTTAENHGVLPNTLDSKEKLRVMICHEFDSSRTLKTWVRCVNCLLDNATNLDKHSNCMNSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS6</accession>
    <name>A0ABV2ARS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003876</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002675">
        <property type="protein sequence ID" value="MES1922369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="7012" checksum="AEC3CB636105D313" modified="2025-10-08" version="1">MVSPYDLGGKKANFENVFGKNPVCWVLPVKTQFSSGFDYHLLTSSKLKSEVDQSLVQEMESVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART1</accession>
    <name>A0ABV2ART1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003899</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002714">
        <property type="protein sequence ID" value="MES1922390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24007">
        <property type="entry name" value="BRCA1-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24007:SF7">
        <property type="entry name" value="BRCA1-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="2">
        <location>
            <begin position="30"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11588" checksum="55125BEEC67A25B8" modified="2025-10-08" version="1" fragment="single">EGFFELKEEKTEFPVSPFETTFDSNPIVVCPVCLEDLQNESKCVLTLLCGHKMHVGCLSSSSVCCPICRFEISSAKHFSKCDFCGAQGQLWFCLVCGSTNCERF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX9</accession>
    <name>A0ABV2ARX9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002315">
        <property type="protein sequence ID" value="MES1922163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9286" checksum="A445C1D29581C5D9" modified="2025-10-08" version="1">MKGVPYHGLNCSLDDIEHDQPFHEDKDRSIKEHQLSEMEIQSMLTPLSSYSSAVGKICPPHLQKIRSNNKNESHDDPKSSQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS01</accession>
    <name>A0ABV2AS01_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003933</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002766">
        <property type="protein sequence ID" value="MES1922422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12411">
        <property type="entry name" value="RRM_ist3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051847">
        <property type="entry name" value="RNA_proc/Spliceosome_comp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003954">
        <property type="entry name" value="RRM_euk-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045844">
        <property type="entry name" value="RRM_Ist3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45880">
        <property type="entry name" value="RNA-BINDING MOTIF PROTEIN, X-LINKED 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45880:SF1">
        <property type="entry name" value="RNA-BINDING MOTIF PROTEIN, X-LINKED 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00361">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="49"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="133"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="172"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="176"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22537" checksum="B348375A1E848CBA" modified="2025-10-08" version="1" fragment="single">KTLNYKHENGKSQINLKNIIKEIEKINKKELRLNTPESASWHAAYKNSSYVFVSGIDYQFSEGDIICIFSQFGEIVDCNLVKDKEKGNSLGYAFVAFEDQRSTVLAVDNFNGTKINGRILRCDHVKKYRRPTRKFKNEENSSSAQEGQSDEEYESRRKLIWDPSKFTIKENRKKKDKIDKKTKNKQKIDKIDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI1</accession>
    <name>A0ABV2ASI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003295">
        <property type="protein sequence ID" value="MES1922636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="26303" checksum="F7FB0E4861B3F905" modified="2025-10-08" version="1" fragment="single">PLHDTVANSAITISLTVVSETIQNNTITIVSASATTEWTTEKAVACFEFPDGLLLRPGRYFWKLEEFLLFPFYLGNSDQALESGGMVFFDWTKFDRSHPNSVLFPVDSEMGQPMFVFLFDAIPVDDLFEPLETFFRENVDLEGSLGNPNHYIDIDTVVDDVSDSDEEIRIIELDFRDLDRIVEELADELIGEIALDLKERLHNIVDFLRDLCRQICNGNVPAVTVHFRMSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT15</accession>
    <name>A0ABV2AT15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004136</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003248">
        <property type="protein sequence ID" value="MES1922619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18167" checksum="EC9203ADC544B216" modified="2025-10-08" version="1">MNIKYITKYSKKYKDTTSSSKCRLDKYVRKNTKPKTIDPIISSFILVVPKYNMREAAAAEKDEKAKKNAKTLHFIPKSRKTLSITACRNKTINGNSWIDAGTLSGKAMLNTLAALRMPNIFVNNSDSMRTKFFFAGWKKRHFERSNMIIAMYKKAIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE7</accession>
    <name>A0ABV2ATE7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004447</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004034">
        <property type="protein sequence ID" value="MES1922917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="187" mass="21035" checksum="CD5ABC7A9C1461AC" modified="2025-10-08" version="1" fragment="single">METVGLDFAGGLCTSTNIEYSKINDFKCAPNYVLLIRDHFFQSDSGGNAISGSYFRPLEPNDPSPTVCFVGGSSDCVVKVDSIFDYLSPICVNMCRLKIEESLMELRRKYRLAIGEWREFRRKDMNKACCDSAEKLQKVIRKGLHLVCANGYERKNPKRSLGVISHVSGSRDCSIERKVMDRLTVCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF3</accession>
    <name>A0ABV2ATF3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004049">
        <property type="protein sequence ID" value="MES1922922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11396" checksum="80F5FAB1C274FCDB" modified="2025-10-08" version="1" fragment="single">KSSKHKPEFANLDQHDIMAFRRYRRSNSNKNFEKIINDLRKTEQNRLLLSDRYTCPNGDRPSGKLQCKDGLIMDIKNGKLVNPYGDVKMTCVGLFEFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH4</accession>
    <name>A0ABV2ATH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004501</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004193">
        <property type="protein sequence ID" value="MES1922970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="17757" checksum="F7067479103342D2" modified="2025-10-08" version="1" fragment="single">YREFSKKTDYEEFQNEVECRTFQNEVDYEKFQNELYYELCEKQTGCEIFEEEEDYREFSKKTDYEEFQNKIGFRPLRMEVDDQPSTEKVSNEEFQTVECTKSRYKVDYEPSPNEVYNENCQHKDSKISRYEFEKEEKSTEVENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK7</accession>
    <name>A0ABV2ATK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004287</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003626">
        <property type="protein sequence ID" value="MES1922766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17281" checksum="9058A330A6EBBA5B" modified="2025-10-08" version="1">MTSPSALVSVSRLVAFGFGVNFARNKKAKIKQFVEEENFIKLKQLEEMGIDSHSLKGASFHIPKIHDPWYTANEIKTRERRPSYFLNPADEFAYQTKIEREKLAKLYQQKTLIARSLAKEKQSGYHSVELEEVTEVDPKEIDLSVEERY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL9</accession>
    <name>A0ABV2ATL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004549</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004376">
        <property type="protein sequence ID" value="MES1923016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18325" checksum="9FCC94BF802A438C" modified="2025-10-08" version="1" fragment="single">MEATKSLEKIERLIKITRNLTGRLAELNLRPKIDSKKTKTFVKAFIKKHVDAKGKPVSVSKSVGFKASEKDLTQCFGKYQDHYDFAKDLIRFVSIFHNFIIDLAVSTIILMYKINPRFIERLMDMVIGYSKLTIMLSTSGELTSCVFLYIAGYETVNKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ9</accession>
    <name>A0ABV2ATQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004583</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004481">
        <property type="protein sequence ID" value="MES1923050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11884" checksum="415608A0BA3CCCF7" modified="2025-10-08" version="1" fragment="single">MKRTSMNSDLPIDFGKKLYSMLFTYSRKDPIITKTTEWLIKTAHENSNRQKEEKKENENLSIENIIDFILTQLEKYAGAYAQKPLLFIAHFLDKKNILTID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU2</accession>
    <name>A0ABV2ATU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004368</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003858">
        <property type="protein sequence ID" value="MES1922841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="Retrovirus zinc finger-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="123" mass="14321" checksum="A6DB9886D25214B4" modified="2025-10-08" version="1" fragment="single">RGQNILCYICGYEHNPKWCSDIYCSRCLKGGHISEDCNNKINMLEFCLLCFSENHSYDECDGMPEKKFRNLISNERCFACTEIGHLVCSSNNLINKNSYNTQDSKKIRTLVRNKMHKNLQDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU25</accession>
    <name>A0ABV2AU25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Unconventional myosin-XVI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">MYO16_2</name>
        <name evidence="8" type="ORF">MHBO_004711</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004963">
        <property type="protein sequence ID" value="MES1923166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140:SF706">
        <property type="entry name" value="DILUTE CLASS UNCONVENTIONAL MYOSIN, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140">
        <property type="entry name" value="MYOSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00193">
        <property type="entry name" value="MYOSINHEAVY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0505">Motor protein</keyword>
    <keyword evidence="3 6" id="KW-0518">Myosin</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myosin motor" evidence="7">
        <location>
            <begin position="15"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="113"/>
            <end position="120"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="17926" checksum="527F7281C95A6F7D" modified="2025-10-08" version="1">MPEQTEIQENPPELDGCPDMSALIYLEEPNVIHNLKIRFERQTVYTRIAKILISINPYEWLPIYSNDNIKRYEENSLLDVPDSSIDPHCYNMAAIAYNDMNSESKSQSLIVCGESGSGKTESAKALMSFLAKTKTESDSSENLSEAVLAVNPILVCTTFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU41</accession>
    <name>A0ABV2AU41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004477</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004114">
        <property type="protein sequence ID" value="MES1922946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6067" checksum="546A4CFBF95C80E1" modified="2025-10-08" version="1">MPLAKTDASPYAATRAKNIGADTVAPANSARGSSAWTCFLSLEVPTPYSGVGRKIRIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU57</accession>
    <name>A0ABV2AU57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004442</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004023">
        <property type="protein sequence ID" value="MES1922912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23738" checksum="965493A05F74DAF4" modified="2025-10-08" version="1" fragment="single">MIISLLKSNIEPHKISKVAKIQSNRCYFRQKGFDFYHRTLRCSPFKFNFLNLIGNFSEWLSSDSENDLTGNCLSGLDSCFYKNVSGLLKSFDQLVSTYLQIGLNSENIIKVLALMDIFSINMTHENCNLILRENIIEILFENLSNHQKFQFGQNEDFVAKFNVIEKNVKMNQIDSPPSSPDSSKTDSFENEVFYKNSKKLFYKCC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU97</accession>
    <name>A0ABV2AU97_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004573</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004439">
        <property type="protein sequence ID" value="MES1923039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100">
        <property type="entry name" value="IMP2'P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100:SF4">
        <property type="entry name" value="USPA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="23"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18373" checksum="50D26B1CA0C01696" modified="2025-10-08" version="1">MTRKTTENIKINDLEIPKELQNRRRILIAVDNSKHSAKALLFAKEQILRKEDFVMLLTATKKLIAPYLITFEAIKPIEDDELNKETFALYNQLEQIENEKMGFLVQGDDNRETLIEAIEELEPEMVIAGSHGKGTVKRMLLGSTSEYLLHHSKIPVTIVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN9</accession>
    <name>A0ABV2AUN9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004954</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005953">
        <property type="protein sequence ID" value="MES1923388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="5757" checksum="B0718032772515E5" modified="2025-10-08" version="1">MVIAMTTPSSMVCQMVVLKETVKMMVMVMVAMSQMTATSLILLIPSYTRKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR3</accession>
    <name>A0ABV2AUR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004966</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006007">
        <property type="protein sequence ID" value="MES1923400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16146" checksum="A7497ADECA1090E0" modified="2025-10-08" version="1" fragment="single">MGIYSSVISSELNSERPEKTWKYVIGYIKHGILSNNKNDLVSFALLDASKALTREGKYEESVNLLNLMQNLVNDNSDRNELKQTIRELVESHVKNGDFDYLGKIKDLNLKISARNKYLENERKASLARNYFFLDNLDNVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS6</accession>
    <name>A0ABV2AUS6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004681</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004866">
        <property type="protein sequence ID" value="MES1923138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24355">
        <property type="entry name" value="G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24355:SF30">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE 32B ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="62"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="19278" checksum="06D9907BB000B5CE" modified="2025-10-08" version="1" fragment="single">LLKIITKQKEKIRQTISDLYNQHTLRKIQIFYSTEEREEEKIIKELTKSQSSSNSKVNMDDFDKLKVLGRGTFGKVTLVRKKSNSKIYAMKELSKKDVLQKNQFENTMNEREILQLVNHPFLMNLRYAFQTDTKLYLILDFYKGGELFFHQLQKKTFSKKEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW3</accession>
    <name>A0ABV2AUW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005037</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006310">
        <property type="protein sequence ID" value="MES1923463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="58"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="8308" checksum="BDDE9C2013C351DA" modified="2025-10-08" version="1">MPNTIDIHGRKRILHNGLEICNNFNSSPVSVTVTAAHPNTCLTCKSKAHSSLTCPIKSSQTKSSNSSLSGDERNNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW47</accession>
    <name>A0ABV2AW47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">60S ribosomal protein L30</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPL30</name>
        <name evidence="4" type="ORF">MHBO_005131</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006780">
        <property type="protein sequence ID" value="MES1923542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039109">
        <property type="entry name" value="Ribosomal_eL30-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="Ribosomal_eL30-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004038">
        <property type="entry name" value="Ribosomal_eL8/eL30/eS12/Gad45"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11449">
        <property type="entry name" value="RIBOSOMAL PROTEIN L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01248">
        <property type="entry name" value="Ribosomal_L7Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="L30e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal protein eL8/eL30/eS12/Gadd45" evidence="3">
        <location>
            <begin position="11"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="8858" checksum="CFD7B6503ECFBF33" modified="2025-10-08" version="1">MVATKKKSYESVNAKLKLVMKSGTVSLGFNKTLEHLRTGAAKLVIIANNCPPIRKSQIEYYSMLSKTNIHHYQGRFHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEU8</accession>
    <name>A0ABV2AEU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Kinetochore protein NDC80</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_000230</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Component of the NDC80 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Chromosome</location>
            <location evidence="10">Centromere</location>
            <location evidence="10">Kinetochore</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the NDC80/HEC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.30">
        <property type="entry name" value="Ncd80 complex, Ncd80 subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005550">
        <property type="entry name" value="Kinetochore_Ndc80"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055260">
        <property type="entry name" value="Ndc80_CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038273">
        <property type="entry name" value="Ndc80_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10643">
        <property type="entry name" value="KINETOCHORE PROTEIN NDC80"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10643:SF2">
        <property type="entry name" value="KINETOCHORE PROTEIN NDC80 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03801">
        <property type="entry name" value="Ndc80_HEC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 10" id="KW-0132">Cell division</keyword>
    <keyword evidence="9 10" id="KW-0137">Centromere</keyword>
    <keyword evidence="2 10" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6 11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 10" id="KW-0995">Kinetochore</keyword>
    <keyword evidence="4 10" id="KW-0498">Mitosis</keyword>
    <keyword evidence="7 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinetochore protein Ndc80 CH" evidence="13">
        <location>
            <begin position="34"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="175"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="250"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="399"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="177"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU368072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF03801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1918229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="554" mass="64101" checksum="B32F01E21F7069C6" modified="2025-10-08" version="1">MPKYQNQQYTRRSSLAPKGGRPSTIFSQRNVQSEKEENIRVLAEFLVEHKFPDEVSVRTLKSPPTNYVVNIFLFLFNKFNPNLVEFERFQDDVKTLLTLYGFPFSLAKSYLQAPNAPSSWPYILSSIVWLVELYQYGQKPSNRTTSEKGALEALALTAEQYKSFLSGSDMDEVQQGIRERHEERQQEMANETEEQKRAVEELESETAQLRKRPTAAQRKAAKDKLEKDIEKFEKLLDRKKAHIEALAEKTREYQSQDDETRREFAKLSSEEKRLQKEVRGQEIKPEEIDQMRREGKKLQQDLNSLQRAQKEKLKRLENAESQKGVVRNSLDAAADQLNERLRAISVVPAEAKLAYDNNYALAINHDAGFAEGEDISASLRRATSVDLRGSLKPHLQQIHRLLAEEKIKQEAEVAQLEAHLQDLSERERRAEREKEEVAQGLVSMKNMIEAKARQFEEERDRANQRLFSKQMDAFSADSGAVEIFELVGKLNQLTDQEKALEAEEKTREKAKTGEVLRELENFFDEKERRELQFRALDDLADQVSAKFPVLNKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEY3</accession>
    <name>A0ABV2AEY3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Zinc finger PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000253</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000034">
        <property type="protein sequence ID" value="MES1918259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="213"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="502" mass="57419" checksum="911E9B77AE0A66E9" modified="2025-10-08" version="1">MAENPNDKNPELSFSPNLTQKSDIAPNSKASLIKSTSENLPQKTAAEKSSEQRKKIEQNSKIAQKIAPKIAPKIQNLLKQDEMTQNTKNLKIAKFETSENLKIQNNTTPKNNKTENKFIFSPGSHFALTANQNLKQKIFPPNQKIFNVHPLSHGAFQRAAASVGPRLAKSKYFPTMGAHNQENPQNTNFPQNTLNLGHSLKTQFNHNLKNQPDAVHSAARQNPPFAPKSAQQRPPSKLHFQPTPVSGRDFSFGLDAASFLADKVAKSHRGKKALEPEKASALDKVLFYGPDHASKMRAPEKERKWVDLLAAQLSEQQRWREEEWKRHQHQIYLARNRNTLRLQRMHLARASQEAIRNRLKSHFPSQNANFRMRTFFRPSEYGQSRMAGSPLRPPNFGNAPLRRNFLDEQRVFGNLPLRRVCIRCRSSMHQTKLLPCSMCSRAIHSFCVPGGVPSSERRMAWICSQKCKNKANAVRRRDRNNKPRKVLCWIFLLFCCKKEQKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF41</accession>
    <name>A0ABV2AF41_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ZZ-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="50"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="116" mass="13431" checksum="F0AD66B1E9A46C11" modified="2025-10-08" version="1">MSRKGCARGIRKAFQTKGVDRFRCESCDYDMCDWCFMRELGRQRKSLTASFSKTSLSTKTSRRLSGSRKSNASKKRVRRSNARRVCLKEDLSSAIRTMEKIVNSYLELQQKNAQTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFA3</accession>
    <name>A0ABV2AFA3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000338</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000048">
        <property type="protein sequence ID" value="MES1918365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="80"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="99"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12904" checksum="B86C2F568C86E776" modified="2025-10-08" version="1">MSSQICLFFLGFDGNCRWGDECKFQHVPADSLSDEELRYHLEYGTKVLEGHLKKNGLYPSCTKLKRQKAKIMAKRKMRRMLENAGKKQNGRINSNGTFSEDEVTDYSNDESC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ3</accession>
    <name>A0ABV2AFJ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">poly(A)-specific ribonuclease</fullName>
            <ecNumber evidence="5">3.1.13.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">CNOT8</name>
        <name evidence="15" type="ORF">MHBO_000398</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Exonucleolytic cleavage of poly(A) to 5'-AMP.</text>
            <dbReference type="EC" id="3.1.13.4"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the CAF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.13.4" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000061">
        <property type="protein sequence ID" value="MES1918430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039637">
        <property type="entry name" value="CNOT7/CNOT8/Pop2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006941">
        <property type="entry name" value="RNase_CAF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10797">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04857">
        <property type="entry name" value="CAF1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="13" id="KW-0804">Transcription</keyword>
    <keyword evidence="12" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1918430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="33251" checksum="C489A661C120BC22" modified="2025-10-08" version="1">MSSEVVDVWSYNLNQEMTNLSQSVELCSFVAINTEYPGIIIRPIQSYQNFNDYRYSVVRNNVNLLKIIEFSLTLFDENGKELEKAANYKFHFKFDPLKDIAAEDSIQFLRNNVKIDFEKHRVNGIDPEKFSEKLIPSGLLLNVDITWICYHGSYDFAFLLKMVLNKELPKTKETFFSYLKTYFNEFYDVKTITSHIEKLSNVPLLALSDAIKKMAKKQNVVPAESEVERDEQNMSRLTGQIFFDLKKSLISPKMQLELWSSIYGLGPDDAKLYYHRRALSRSIGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL8</accession>
    <name>A0ABV2AFL8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000413</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CLPTM1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008429">
        <property type="entry name" value="CLPTM1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21347">
        <property type="entry name" value="CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21347:SF0">
        <property type="entry name" value="LIPID SCRAMBLASE CLPTM1L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="77"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="85"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16757" checksum="EBB8FBAF6AB7EE2C" modified="2025-10-08" version="1">MMCPQLYINYKLKSVAHLPWRMMTYKALNTVVDDFFAFVIKMPFLHRIACFRDDLVFAVFLYQKWKYRVDYTRTNEFGYTPLNENNKDSLYKGKIDNNKDIDNNNNKDIDNNNNKEIDNNNNKEIDNKIESKKIAKPKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFP6</accession>
    <name>A0ABV2AFP6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000259</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000035">
        <property type="protein sequence ID" value="MES1918269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="15302" checksum="DC1A3667026E95FB" modified="2025-10-08" version="1" fragment="single">MMDRYQNLFEFFETQKKVPNHYLNDISYGRVPSLKDFLQQHEDVEYDLHDSFNDLNYINVNSLPPLMQMKDEKAYFTETKKKMEINVLKRHKMRLKSTQDEKEKNYSCKICSKLFKKISHVKSHMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR6</accession>
    <name>A0ABV2AFR6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000219</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000028">
        <property type="protein sequence ID" value="MES1918218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15492">
        <property type="entry name" value="PHD_BRPF_JADE_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050701">
        <property type="entry name" value="Histone_Mod_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793:SF107">
        <property type="entry name" value="BROMODOMAIN-CONTAINING PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793">
        <property type="entry name" value="PHD FINGER PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13831">
        <property type="entry name" value="PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="6">
        <location>
            <begin position="380"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="212"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="320"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="7"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="220"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="489" mass="56914" checksum="2B1F562ECFF2C77F" modified="2025-10-08" version="1" fragment="single">MEENKNNTKNIGRNSINSDKHENSPQKKLPPPILNPNIETDIKNKLNGKENIQNKIQNVNLNIPSLNINTTSKKNIIFPLQKNPNLNPNFAQNSSRNFKNSSNVPKMAIAYPLSKNNTNWMRQPLNRNSIQNFRQPLILTKYQNFNNRNSSNFIKNRPIYLNYSQKPVYSSNYYLHQRRTYPNVYRHPIYNSNLPRYSNLYQPRTNFRYSGKFFTFPKPQRSKKNQSKTRTRKPKTLKTNRTRRKARKRTNDQKNSSSGRSRTRKLISVKIDLPSEISDEEPFSHDKLIKLETEFFRKEKNIYKAENTSRIDRLTKIVDNNDKNNIGDDNEKSDRFNKNNEQKRLNEQNKIINDKPNSESFKNEGNIIISKMKEIQDENWTPCDICGVFSSAIADLIVYCDGCGVAVHKLCYGIEPIPKGDWFCAPCTAELAREALRDSSFKRASVKEKFAPKGKSVSKILAENEAFFRNDENCDKNGNLKIDNNLDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW6</accession>
    <name>A0ABV2AFW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005301</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000047">
        <property type="protein sequence ID" value="MES1918354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13847" checksum="5F68382A266AC5A5" modified="2025-10-08" version="1">MPNVKNLDIRKSSSCLGTENGLKCVFYCVSPYSPNINEVKCLDGNWSPNFSCVSKKKKSLILILAISIPLGVLFIFGIILLIVFVRKWISNRRSKKEAANETDKKNERYSQISDQIEIIHIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ9</accession>
    <name>A0ABV2AFZ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Inhibitor of growth protein N-terminal histone-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000533</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000088">
        <property type="protein sequence ID" value="MES1918583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1740">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024610">
        <property type="entry name" value="ING_N_histone-binding"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12998">
        <property type="entry name" value="ING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inhibitor of growth protein N-terminal histone-binding" evidence="1">
        <location>
            <begin position="4"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14745" checksum="708308E39143CB7A" modified="2025-10-08" version="1">MATLENLIKDFDNIPYAIKRELELLTKLSYKTQSKQIQLENMYNRTVENLNNVPETPEETNILNGKIRTIRKNQKEIFFLHSEKIASVEKIQKIVNFFYPKKIKSALCRTECCVVQLKDEFKGNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD5</accession>
    <name>A0ABV2AGD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000118">
        <property type="protein sequence ID" value="MES1918750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="143"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="105"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="23497" checksum="769088489D9973C4" modified="2025-10-08" version="1">MYSRYYPFSVLGLHSFDGFSSTNGLYWCKDPFCFYYLCQSANMYFDYGSYWRYRNQMNNYDFNQNNRPEMESSEDNIYRENGRNEDFNNKTEDPKIEEDLYVPPETSTNDEYYQQTESTTNKIQEEHQNGDYIGYENDEMHHYPTERENREEEADSIESLYSTDKLESREQVFGAKIKRRLLREDKSGKRAYQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGL1</accession>
    <name>A0ABV2AGL1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Vacuolar protein sorting-associated protein 53</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">VPS53</name>
        <name evidence="1" type="ORF">MHBO_000691</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000125">
        <property type="protein sequence ID" value="MES1918782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039766">
        <property type="entry name" value="Vps53"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12820:SF0">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 53 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12820">
        <property type="entry name" value="VACUOLAR SORTING PROTEIN 53"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="251" mass="29599" checksum="501670EFE1B7E17A" modified="2025-10-08" version="1" fragment="single">KIEQISEERPLEMLTLILKTTSYIEEIVLQLKKRIFKDCQKINFKTDFDFHKLEEINIKLANNTLNNISDLINEKCEPILRETNKLNLAKLKTLGEPSRFTEALSVIIERKFVILRQNLVTEHYLIFCGRFLAKFYQIFNDFIQNCRMVRKIGAQQLLLDHYTIKSHIQRNILSSDEQTSDNLLKKIILAKSENLEKKLKLLSSEEFSVKKFCQFFPTFGKTELKKILSIKFGDSADTKKYYKDFETLNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY3</accession>
    <name>A0ABV2AGY3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Methyltransferase-like protein 5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000795</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily. PrmA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000152">
        <property type="protein sequence ID" value="MES1918902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051720">
        <property type="entry name" value="rRNA_MeTrfase/Polyamine_Synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007848">
        <property type="entry name" value="Small_mtfrase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23290">
        <property type="entry name" value="RRNA N6-ADENOSINE-METHYLTRANSFERASE METTL5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23290:SF0">
        <property type="entry name" value="RRNA N6-ADENOSINE-METHYLTRANSFERASE METTL5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05175">
        <property type="entry name" value="MTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransferase small" evidence="3">
        <location>
            <begin position="39"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00041374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="21698" checksum="B4CD5C08187F9163" modified="2025-10-08" version="1">MKLKAMESVLQQFEAFKEPQVSLEQYATPPKIASQIVLHLDKTQFKFEDKLIADFGSGTGILSAGAILQGCFAVFCFEKDAAAMLTAKRNFEKFGFAPELILIDVAQIDRQKRLFALFDNVVMNPPFGTRLKGIDLLFVKNALLVTKDSVYSLHKSSTRKVFRNLFSQPSPFFHRKLKNNAFLSNRWLNGAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH26</accession>
    <name>A0ABV2AH26_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">U4/U6 small nuclear ribonucleoprotein Prp3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">PRPF3</name>
        <name evidence="8" type="ORF">MHBO_000863</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000171">
        <property type="protein sequence ID" value="MES1918979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013881">
        <property type="entry name" value="Pre-mRNA_splic_Prp3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027104">
        <property type="entry name" value="Prp3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010541">
        <property type="entry name" value="Prp3_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14212">
        <property type="entry name" value="U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14212:SF0">
        <property type="entry name" value="U4_U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08572">
        <property type="entry name" value="PRP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06544">
        <property type="entry name" value="Prp3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0687">Ribonucleoprotein</keyword>
    <feature type="domain" description="Pre-mRNA-splicing factor 3" evidence="7">
        <location>
            <begin position="138"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="Small nuclear ribonucleoprotein Prp3 C-terminal" evidence="6">
        <location>
            <begin position="400"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="74"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="371"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="371"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="488" mass="55160" checksum="9AE9B985C71D0AB7" modified="2025-10-08" version="1" fragment="single">MAAKIKTKPAKNDKKQSSQSGLKSPVPPRHLKWRSPPSPFLANVYIPSFVKRLKTITARNKAIGAAKPSAFSNLPNAFGEKKPETKKTPHRISKTRMPGSERERFEGPYDPNFGKARETAIFTNEAALSSLSGQTSSSFFDPEVAFHSRKSQVRKRRTLEMVKPGTYEKRAHTMRAKILSKSMAKQEDNVEEAETDEEFKYFEQSENLLKAENSEAELKTQVFGENTKKDGFLEKLKSKAALAVEWWDGELIHQPHYSRGKDNARGEMITNLVQHPPPVKPLLARRNVDPVPLFLTDREKKKARRMRKRAKLEVQAERVRLGLEEPPDARVSLANVMRVLGNSAVQDPSAVERQVKAKVERRRMAHLLQNETRKLTPGERRQKKRRKAMEPTGNGVDAALFAIKSLSDGRSRFKVDVSAAQLNLTGVGAIAPRGCVVLVEGGPSGLRKFKRLMLQRIRWREERVGEGEESTEDEFVEEAKDVVLVWEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH31</accession>
    <name>A0ABV2AH31_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000170">
        <property type="protein sequence ID" value="MES1918976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.620">
        <property type="entry name" value="q2cbj1_9rhob like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="379" mass="44224" checksum="E96FDB39AAF23F05" modified="2025-10-08" version="1">MPLNKIEKSKIKTNSKLILKKNKNLFNKTKIQIGNYLLAPGKNLFPLKNSNDFLKNEDYKNIKEKIDRDGYFYLKNFFDKKTIETARKKIFVFLANSNLAKKLNFGKNIAVLNDENKEGFTVQMISGKETKEKPNFDTEKWKDLCQSKELKKIYDGLSLNGLLKSVFGNIKMLSDQSWLRLIGRNGATQEHADYYYFKNESVFNIFAKEIKKERIGNFGFGKENCFVCRKSTKETEFRKCALCAKLSHLDCLDGERKNSLSKKRFWLYLRTQKFQKCKYHKILPTKANSIAKNVHLRFLALTLVGFVWAKNINRQTAFSESAQNPKIWQTLICHNSENKFRLDSTKILFGKSLLKWKVAILSFSTLRLFMARRSTRLAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD2</accession>
    <name>A0ABV2AHD2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">polynucleotide adenylyltransferase</fullName>
            <ecNumber evidence="5">2.7.7.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">MHBO_000706</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the poly(A) polymerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.19" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000129">
        <property type="protein sequence ID" value="MES1918803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05402">
        <property type="entry name" value="NT_PAP_TUTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="entry name" value="Beta Polymerase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007012">
        <property type="entry name" value="PolA_pol_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048840">
        <property type="entry name" value="PolA_pol_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10682">
        <property type="entry name" value="POLY A POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10682:SF10">
        <property type="entry name" value="POLYNUCLEOTIDE ADENYLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04928">
        <property type="entry name" value="PAP_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20750">
        <property type="entry name" value="PAP_NTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="Nucleotidyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81631">
        <property type="entry name" value="PAP/OAS1 substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Poly(A) polymerase nucleotidyltransferase" evidence="14">
        <location>
            <begin position="16"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="Poly(A) polymerase central" evidence="13">
        <location>
            <begin position="227"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF04928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF20750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1918803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="321" mass="36421" checksum="39775769102DE810" modified="2025-10-08" version="1" fragment="single">MIPSNTIDFEKQKTIGITEPISLDGPNELETKLDELFEKTLSKISPPESEEDKSKQKRILNELSQIFINWLRNATKKRDGNASNAEHNNAISDSSEFAHTAPLVYTYGSFRLGVHERGADIDTLLIGPNNVTHSMFFEDLCATVLEKHEKVTEFSTAPNAFVPIAKFVYDGVSIDLIYAQTSKMVLDESFDIHDDEVMRAVIPQTIRSLNGVRVTDLLLDLVPNKSVFRKAVRFLKIWAKRRGIYGNSIGYLGGVSYSIMAGRICQLYPKANTAMILKQFFEIYDLWHWPTPVCLTHIRMDGPGDHAVWNREVQIYCKIYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF1</accession>
    <name>A0ABV2AHF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000909</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000183">
        <property type="protein sequence ID" value="MES1919032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="150"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="266"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="168"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="185"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="203"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="280"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="36638" checksum="03436AF714C87E8F" modified="2025-10-08" version="1">MTDKKSSDSSEDLSKNLAKLSFDEELFEEDDDSECEFRVEFSNFPADTRPELLPAFFDLNPKLHSVDEAKIKDIVIIKPGNGIITVTDEVSFAILLSGDKMRFRKKTVSISSLEDPDVTSRIKKRVVIPLVESGELPTVDESLADEAVLSETRESNGPKQQKAPPLNRTRNSGSAQSTRRHSRAPSHNSNSARNLNSRDRNRQSHGRGNWRKSSGRRDTIQSTYNNKERPLRRSNQNVPTEKPQSKKVAAFGGKKFDFSFVNADTQSAPKKRSDIFGSGKFRENKKNETKKEDDSNMRKLKLGFQEKKKEIVASKNKYEALEVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ3</accession>
    <name>A0ABV2AHJ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000999</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000207">
        <property type="protein sequence ID" value="MES1919135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="32415" checksum="FD33D57383666CC2" modified="2025-10-08" version="1">MNSDQSQENIQSLYTSDQIIPFTEALSIPYFSQNMSICLGIIQYGSESDYYLYRGKDEDLYTVYVVDEKTNIEGIQSILNEELSFYPCILGFSDENNLTSLWLKFQKGGTLTFHLRNIDFGREKLLKLIVSAIISVEQCCLIGMVFRKVDETNICFNEHGQFCFMDTSFILHVRRHTYDEDLHNKNARKAFKMLRILFEQIFRFYIGSEEKRYFSELIESLGENDYDFYRTKEIDILESIDFDEAENKRLRVLEESDIKLYWEHLTTKYGIKII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL1</accession>
    <name>A0ABV2AHL1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001021</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000212">
        <property type="protein sequence ID" value="MES1919157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="482" mass="56694" checksum="860622A7E4F1313C" modified="2025-10-08" version="1">MLNFVLNLDFFDDTEIPKLVIKNVFDLQKCNLAQISKTSRAIFKTLVQKIDKNKSIFKFIEEKAKFYGTVFAENLLNKQKLIEFDDFAQSIHFSDHKKQLKTLKLSLKSCFSDCQSYFIDYQNNCFDENQKFSQRNLANKSKNYISNLTNLLIWSNENSILLQNLLNFDNFDISVVFAFLHCHQSIFSQNTNAQKEKHFNLRTLTRILEQNRIISDIVVAKTFLRFDDHFKIFHQNLGKPIFFAVFKNFANLAQSKIRQNLVEKCRSDILLISRRFVEVENSAPKILGDLQNDTNRLKILVNVVNACFCTIDGANKDIEYVESGNKDIELVTEKLFETIFKQLKSVFDIDLMAEKLIVLANLLKINFNDQKFIFSRENYIVSKSFKIFSFPQKRRALACLELSDILAKNRTLFVSIMNENGIKEMLKDWVEVEFEYLQKLKIADFLWFEENFEFLRYCFGLLKFLCGFDDFKQNENGFLVNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP1</accession>
    <name>A0ABV2AHP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000879</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000175">
        <property type="protein sequence ID" value="MES1918999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="211"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="56"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="263"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="39017" checksum="7C80CE1EE89369B4" modified="2025-10-08" version="1">MAKSKKKCHLCNSNSDFSEESAKTKSKNNLFKKTRKKFDKRKSFRSKQSVLSFKNKIAETEEIKKLRREIETLKVQSNNSFSEDKRTTDKLFFLEKVKEFERKNVALEALASSEKERNAKLRKQLDDYEKKNRELQKENDSIKTRLQLRDDEVAALKIDLGNLKRKSSETWREARKWIENQRFLMSNRAEKLSEHKENSDDELSLISETEQIRNGDYSRNEQSSAFAETERKRKDRENLSLYRRRESFCHQKNERKKSVAKLIKRLREKLQVSKHDKRFLRKENIELKKQYIDAKSDIHSLAVYCADLKKSNLRHRRKTNHNNHKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU5</accession>
    <name>A0ABV2AHU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001099</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000236">
        <property type="protein sequence ID" value="MES1919240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20604" checksum="B1A1006C0CE1DD84" modified="2025-10-08" version="1">MYKRRLCSDSDLKSYVENGRFGCTNSWAYFNDFKAVLGTTIFSKENNCFTDLNYFGVIPTTLIDNPISENTYLCKNLEGEYDGNDRFYTKIVKGMDEITKVRSLRLKRDMFVKFGQSKNLVKSKKTLVPKIGIFVVILLGNETVRFNCNFVISFSLLLYKLVIIVTSNIYYLYSISGVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX5</accession>
    <name>A0ABV2AHX5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ubiquitin recognition factor in ER-associated degradation protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">UFD1L</name>
        <name evidence="5" type="ORF">MHBO_000956</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UFD1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000196">
        <property type="protein sequence ID" value="MES1919089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.50">
        <property type="entry name" value="Ubiquitin fusion degradation protein UFD1, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004854">
        <property type="entry name" value="Ufd1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042299">
        <property type="entry name" value="Ufd1-like_Nn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055417">
        <property type="entry name" value="UFD1_N1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055418">
        <property type="entry name" value="UFD1_N2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12555">
        <property type="entry name" value="UBIQUITIN FUSION DEGRADATON PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12555:SF13">
        <property type="entry name" value="UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03152">
        <property type="entry name" value="UFD1_N1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24842">
        <property type="entry name" value="UFD1_N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Ubiquitin fusion degradation protein UFD1 N-terminal subdomain 1" evidence="3">
        <location>
            <begin position="8"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin fusion degradation protein UFD1 N-terminal subdomain 2" evidence="4">
        <location>
            <begin position="90"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF24842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28931" checksum="844227451BBE4632" modified="2025-10-08" version="1">MQTGRAGPSIEEGDKIVLPSSSLRDLTARNIQYPMTFELRSVLRPDLRICCGVMEFTAPEGRCLLPKWILETLDLKNGESVSIKNVRLPKGTFVSFKPIDKSFLKLSNPLIVLEKKLRGYTCLTKNSVIVVTHLDIPYRLEIKSLSPADAVNIIETDLFMEFVQTGCSGAKRKHEEIDLSNKDFKEKLVFAKDSKNEKQKKNKILKDSSIRWSEVVGDFRYFYQEDAVTKQKRLLKREKVEKKYFQGQGHKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI22</accession>
    <name>A0ABV2AI22_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001116</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000240">
        <property type="protein sequence ID" value="MES1919257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="219" mass="24838" checksum="DCF4D413CDB710E9" modified="2025-10-08" version="1">MYFETLQNFLEADKDINFYIKSALEYNNGIPKTLKYATTKDLNCKCAGLKPSTCLNEADFKTNKLVMQDVRSANALIMYVSGNINEEKTYLYDENVIISSIMSTVVRQADKSLEQQLIDLTKSFSEPVANLAFKENYWKSASMTYRYIKSLCNQNTAICPNVTGKWGFAYGNPDNMAGAELVFECADGYKEPEKKTICVEDNYQKVVEWNGEIKCTKIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI40</accession>
    <name>A0ABV2AI40_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001203</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000264">
        <property type="protein sequence ID" value="MES1919356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051834">
        <property type="entry name" value="RING_finger_E3_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931:SF3">
        <property type="entry name" value="RING ZINC FINGER-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931">
        <property type="entry name" value="SI:CH211-59O9.10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="126"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20487" checksum="E6C62E255569D22D" modified="2025-10-08" version="1">MFILSVFTRFDIFVKQIYQKSTILEVFVRMLFFIKRVSISSFLFFLSFDFMFNISHAWFLFTDKNLNCTKARFIYELLELALQSFPLLIWSVYVVIGLCKIKNKNSESEKVGISRIISNEEESGHCNICLEDYKKGETLIKLKCFAEHEFHKKCLNEWIVVNRSCPLCRMSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB6</accession>
    <name>A0ABV2AIB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001268</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000288">
        <property type="protein sequence ID" value="MES1919431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047143579" evidence="2">
        <location>
            <begin position="23"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="361"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="391" mass="44408" checksum="DF31EEB1A348BCF9" modified="2025-10-08" version="1">MSFLMNILILEGLLFATITSTGDLEYLPYDGKSDYNNFDHGLENMGFKPLVDRNQAESRIIKCASSEDRFLCNGNIMRDWVYTRNPLNPPDVLYSQIPDLSECDCVNKEKWLSENQHCPLSTPLGNHVAVKGNLYLKKDAFAHEICYHNLTIKTLVECRNGRKVASEGNRCATRRGTRAFCQNKDLPVFVVTQQFPVTYKTVGSSMNARCENGYAEFKLFCQQNGILEPQINGKKVNMTDVCSQICSERERTLFLERSAFTNKVKSEPRSVEPLQSDREAEPVCYVRSGWKFRSINRSSCAEAPKHQFGIKEKELAHCKNARSGEICQFGCVMYMKQIGQFVCFNGIWISTHDPVCTIASYARGVIALILGVLVYVGIYRFTLDRDILIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ5</accession>
    <name>A0ABV2AIQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-dependent RNA helicase ddx39a</fullName>
            <ecNumber evidence="2">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DDX39A</name>
        <name evidence="2" type="ORF">MHBO_001357</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000322">
        <property type="protein sequence ID" value="MES1919545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12198" checksum="0DBA85959E4BC3FA" modified="2025-10-08" version="1">MDQTKRLQTYNDFKSYARRVLVSTDLFGRGVDIERVNVVINYDMAPDDDTYLHRVGRAGRFGTKGLTISFVSSADDMACLDKVKKRFSVDMDTLPETIPKETYMTTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV3</accession>
    <name>A0ABV2AIV3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Zinc-binding domain present in Lin-11, Isl-1, Mec-3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PLIM2a</name>
        <name evidence="7" type="ORF">MHBO_001407</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000339">
        <property type="protein sequence ID" value="MES1919607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24206">
        <property type="entry name" value="OS06G0237300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00132">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0440">LIM domain</keyword>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LIM zinc-binding" evidence="6">
        <location>
            <begin position="41"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="LIM zinc-binding" evidence="6">
        <location>
            <begin position="189"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="LIM zinc-binding" evidence="6">
        <location>
            <begin position="302"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="102"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="394" mass="45004" checksum="FEBDDBB92C967120" modified="2025-10-08" version="1" fragment="single">MDAYKKAIGSKRKIISNASKWIKEKGKQTYKFPGDKTLHNPRCQLCEKLCYPAEKITHNGTPYHKNCLRCIYCGKKKAPADVSPIGETTFVCDQHKHKVLKSKKSKSKVSVQKPAEKKEQHSKNDNETEKETKSRLSRNPKMGVDQKEKTTESSGLTKIEEGVEWRAEGRKQVYNYPEDVKGPKKRIDPRCHKCGKTVYPAEKFTYEMIPYHRNCVRCLECKIKLTPSNATPFGDEDFLCNNHFQKVIGKINLRSRSRAPAANETNKTFKTTEDLSKGIKWSRSGKKQAYKYLEDLKEKPNPRCNFCGKTTYPAETVTYNSIPYHTACFRCLRCGKKLIGGDANPFGEENYLCNNHYNGVLMEIGTETKSKISKTEKTTTIVNVGLMLLKKFIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW9</accession>
    <name>A0ABV2AIW9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">H/ACA ribonucleoprotein complex subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">GAR1</name>
        <name evidence="10" type="ORF">MHBO_001380</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Component of the small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs (H/ACA snoRNPs).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
            <location evidence="1 8">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7 8">Belongs to the GAR1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000329">
        <property type="protein sequence ID" value="MES1919572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.230">
        <property type="entry name" value="Probable tRNA pseudouridine synthase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038664">
        <property type="entry name" value="Gar1/Naf1_Cbf5-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007504">
        <property type="entry name" value="H/ACA_rnp_Gar1/Naf1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23237:SF6">
        <property type="entry name" value="H_ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23237">
        <property type="entry name" value="NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04410">
        <property type="entry name" value="Gar1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 8" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="28"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00038293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="15871" checksum="5361983621F87802" modified="2025-10-08" version="1">MAIYNNNRGYSNRGSGRSARGRGGSNFKRGRGRGSFRGRNNRRNFDENAPKIQLGTVVHDCEGSLVCKLTNEKVPYFNAPVYMDKKSLVGKVDDVFGTTKNCLFSVTLSDGIKSESLMKRENLEIYVPVNKLLPKSIFLSDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY6</accession>
    <name>A0ABV2AIY6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001279</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000292">
        <property type="protein sequence ID" value="MES1919449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1720.10">
        <property type="entry name" value="endopeptidase domain like (from Nostoc punctiforme)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47112">
        <property type="entry name" value="PX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47112:SF1">
        <property type="entry name" value="PX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="15627" checksum="064A6E8B149801A1" modified="2025-10-08" version="1">MISEGMRVDKVADFLNVKGTRLAFRHLNVDRTDEMINGAQNFLKKHSETPYEKSFVQMFKSAYDGIGGTNKKEDLSSLFCSEMMAKIFQDMGLLTPSSKGGLVCNEYAPRDFTSERELPLLKNATLEDEVLLYDVDEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ28</accession>
    <name>A0ABV2AJ28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphatidylinositide phosphatase SAC1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SACM1L</name>
        <name evidence="3" type="ORF">MHBO_001428</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000347">
        <property type="protein sequence ID" value="MES1919632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002013">
        <property type="entry name" value="SAC_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45662">
        <property type="entry name" value="PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45662:SF2">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-3-PHOSPHATASE SAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02383">
        <property type="entry name" value="Syja_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50275">
        <property type="entry name" value="SAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="518"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="546"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="domain" description="SAC" evidence="2">
        <location>
            <begin position="112"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="578" mass="66704" checksum="508146068D5493E3" modified="2025-10-08" version="1">MKYYVEKEHLNVSNEASNDILKISFGSGEVSVVRRSKEELIPVVDFKESLFVFGAITLKTRKLIIMAKSAKEVGHVYGKKVFKIVLFEIVPVKLHNQSKSDEKEDYICYELIEKALKTRELLFCEHFDLSKTTQSIFVEKDQNKRSDFFIPELDKQNYELSDLQFIWNGHILKEFIEKKAFQFVQPVINGYVGNFEDANENLFTIISRRSVRRDGMRLLSRGIDEKGNVSNFVETETILQRDVEPKNDELVTMNFVSFVCCRGSIPLFWKQKQDLSRKPAILLNKDKNKNLKAFRAHIENLKSYGDLVLVNLVDSSGREKVLGEEYLDVVDRYNSELDGKEGFGRKVEYIGFDFHLECDKLGIANAKKLLQQIERRFDEMCFEGKVSIINEKVITETIKTQKCTCRINCMDNLDRTNLVQSLITTNFFKNLNSEKLARIWVNNGDCLSRQYSGTNALKSDWTKTGRRSFIGLLNDGRNSLNRYRKKTFEDAPISDGLNIFLGKFSPSQNRLRVYKQKFNFYVGAFVFAFSFLVLEYLSSLKNGKNGISRIGSVLVSVGISVYVGFKLRISRMMTETDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ84</accession>
    <name>A0ABV2AJ84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">U3 snoRNP protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">MPP10</name>
        <name evidence="8" type="ORF">MHBO_001478</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MPP10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000368">
        <property type="protein sequence ID" value="MES1919692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012173">
        <property type="entry name" value="Mpp10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17039">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17039:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04006">
        <property type="entry name" value="Mpp10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="197"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="197"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="212"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="26275" checksum="BAB72E21C795B2CB" modified="2025-10-08" version="1">MGEVTATNRPQNSLLDKLLEFDVQVAPAPKITADYNKEIESSIKKHILDDDFDDKLSYLARRSAKVPQARENETNVPQTRSERGLADIYEEKFLDAKNSHLKNRTPFGAKSHILSADSEELSPVQMEALKLFASLSRSLEALSNFHYTPKAPKQWNIRKKEVPAIQLEEKLPITEAKQIEPRLNDDTENAVYKEKKERLFLNDEKSREDRKRQKRKRKSAFKNKLQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG2</accession>
    <name>A0ABV2AJG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MIF4G-like type 2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001569</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000406">
        <property type="protein sequence ID" value="MES1919804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015174">
        <property type="entry name" value="MIF4G-like_typ-2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09090">
        <property type="entry name" value="MIF4G_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MIF4G-like type 2" evidence="2">
        <location>
            <begin position="89"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22007" checksum="8987732AB3D07F24" modified="2025-10-08" version="1" fragment="single">MSFVTTLSKTSPKRLFVKELLLTCNTINPLNQILANSPLLSLLPKITKNENIKNNDKKDENDDKKEKSVSETSETILQKATEYFNNSGDNLNVQNVVQRYVTIIKSKEDVKEVLKLDEKTKILDFGLLKEEEKILRVGLLFLSILEIGSEELSSLFCLFDSFKPVLMEMKSGRKEQKAIVEITVLFWSKNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJM3</accession>
    <name>A0ABV2AJM3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001377</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000328">
        <property type="protein sequence ID" value="MES1919568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036020">
        <property type="entry name" value="WW_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00456">
        <property type="entry name" value="WW"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51045">
        <property type="entry name" value="WW domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="24"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="20039" checksum="43122279F55930C9" modified="2025-10-08" version="1">MKRALKTRKVLKKNLERSEQIENTPWFIISDPSAERPYFYNAKKADTFWKLPDEIKKKYKAEILDIYNKLSRNKGKEVVSPENVIKEDESLGEERHPKEANSEANGELPLKKSRQIGSYEWWEIDDPNSKYLYFFNALKSKTYWDVPLEVYRMYQSMELSHVLIQNLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ0</accession>
    <name>A0ABV2AJQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Glutathione-disulfide reductase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001646</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000437">
        <property type="protein sequence ID" value="MES1919895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046952">
        <property type="entry name" value="GSHR/TRXR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004776">
        <property type="entry name" value="PRK06116.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42737">
        <property type="entry name" value="GLUTATHIONE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42737:SF2">
        <property type="entry name" value="GLUTATHIONE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00411">
        <property type="entry name" value="PNDRDTASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="FAD/NAD-linked reductases, dimerisation (C-terminal) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4 8" id="KW-0274">FAD</keyword>
    <keyword evidence="3 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7 8" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="10">
        <location>
            <begin position="4"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Pyridine nucleotide-disulphide oxidoreductase dimerisation" evidence="9">
        <location>
            <begin position="338"/>
            <end position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="438" mass="48540" checksum="A08359EF272AF46D" modified="2025-10-08" version="1">MRKFDLLVIGGGSGGVACSRRAASYGKKVALFEYKRLGGTCVNVGCVPKKVMYNSAEIHNAIKIAPEYGFDVKIPTLNYSVLKRKRDAYVERLNGIYSRLLNNSNVEVISQKATFKENKVVVAGGLEYTAPVIVIAAGGEPNTLNIPGKEYAINSDDFFNKMDKVPKKIAIIGGGYIGNEIACVLNSLGSQVTVIYRGDKILRGFDEMLRNSLIESMTANGIKIKLNTNLSKITKNDHFLDIETTKGDIFKRFDQVLFAVGRHSVADQLGLSNTALKLNNKNEFETDEWEETNVKGVYALGDINGKIQLTPVAISAGRALADRLFDGQKNRKTDYENVPSVVFTHPPIGTVGLTENEAVKRFGRNKIKTYKSTFVNMLYALSEIKPKTNYKVVCLLPEEKVLGVHLFGHGSDEILQGFGSFIHFQLYQIYNNNFCDFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJV3</accession>
    <name>A0ABV2AJV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Photosystem I assembly protein Ycf4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000454">
        <property type="protein sequence ID" value="MES1919948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="187" mass="22248" checksum="F56777F8992E5AAC" modified="2025-10-08" version="1">MLSKNFRLLSKKTRFRLNIRFFTKEKPIAKTPNLEQQKWEKKVELFEHNIRYPFLVLGSFGMYFLLRYNLDVLSGKFMLVFDALVLFMTITTAFVALLPPKRIIKVLLVRPPGIFKSDFQNHILKFEREKKYEFKVKDLKSKITIQRPIHIYNIYGPQNFRITVPLSISENNKEAVEVFKNIKPMNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK20</accession>
    <name>A0ABV2AK20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001398</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000336">
        <property type="protein sequence ID" value="MES1919597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039241">
        <property type="entry name" value="Rrp9-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19865">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19865:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-INTERACTING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="7"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="21739" checksum="7FB575EC0177F269" modified="2025-10-08" version="1">MTYIETLHGHEASITQIAAKNNQNKILSCGEDKTIRVFKIDAGTQLVFKAFSVHSAAIDCCCFLNKSDFIVGSQDGSLSMWTENSKKPIFVEKRAHDGKWITALAIFGGSENKWSDLVATGSSDGFLRFWRILGETGNTQIKQIGKVKLEGYINSLKFNVSRNSLLVGVGREHRFGRWEVIKMAKNQVFEILFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKU4</accession>
    <name>A0ABV2AKU4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CSD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000596">
        <property type="protein sequence ID" value="MES1920301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46565">
        <property type="entry name" value="COLD SHOCK DOMAIN PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46565:SF20">
        <property type="entry name" value="COLD SHOCK DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="2">
        <location>
            <begin position="159"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="132"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="27469" checksum="965B096F7A398979" modified="2025-10-08" version="1">MSLPKKSAKIDENHKSLFEEKFVNKSTNPFLKCSSNVANGQSKKSGQLLENDKKNEIVFEVEKLIGQFIDNNKQLERPSKYNDADNADKNFTKNRKIAKNENFLQKMNDLCITKIQNLKKVEEHFKTQKINEDVNRENGFQKEPKEGESSDSFDETVRKQKGKVIWFCPRKGYGFIRTKGRDLFVHHSGILGLGFKILKYGENVEFEVVTDRDGKKRAINVTGPDGIELDGFTTFIIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC0</accession>
    <name>A0ABV2ALC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ubiquitin-conjugating enzyme E2 D1</fullName>
            <ecNumber evidence="6">2.3.2.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UBE2D1</name>
        <name evidence="6" type="ORF">MHBO_002151</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.23" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000697">
        <property type="protein sequence ID" value="MES1920486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061631">
        <property type="term" value="F:ubiquitin conjugating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24068">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="2 4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="5">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="3">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12010" checksum="38213B4E7475D68D" modified="2025-10-08" version="1" fragment="single">PDSAYAGGVFFLEIDFPKDYPFKAPKVKFKTKIYHCNISHGGEICLDILKDQWSPALTISKVLLSVCSLLTDPNPDDPLVAEAASIFKRDVNQYNKIAREWTTKFAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH1</accession>
    <name>A0ABV2ALH1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001862</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000532">
        <property type="protein sequence ID" value="MES1920152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030616">
        <property type="entry name" value="Aur-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24350">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE IAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="47"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="25774" checksum="B5A90417FB438389" modified="2025-10-08" version="1">MPRFEKKRRNCTSNKSSANPHQFIDADLEMTSAQPALENPPSEGWDLNHITKIRPLPGRRVHLAEIKSSKEKFVLKRLDKIQTNYPPLSSYLIEKDIHLSTSHPNVIHTFGWFETTESVYLMLEYAKKGDLFSYANSGNELRLAEYIRDVARGLLYLHEEGIIHRDLKAENVVIGDNGECKIIDFNLSARLERRAEMLTDLSRAGTLDYLSPERMLGNPYNHCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI5</accession>
    <name>A0ABV2ALI5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DEP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002209</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000729">
        <property type="protein sequence ID" value="MES1920546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000591">
        <property type="entry name" value="DEP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00610">
        <property type="entry name" value="DEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00049">
        <property type="entry name" value="DEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEP" evidence="2">
        <location>
            <begin position="169"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="266"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="371"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="278"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="302"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="372"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="410" mass="47823" checksum="EEFEB1BAD39973F5" modified="2025-10-08" version="1" fragment="single">MSKNFLDNEELSNWTVDYTAKIFEDVLKIYQRTQNDIFKMLRNSYRRFKRSNHFEELQKELSESSPEMTSRGSCIRDDCNCELYADSGNIANCGSCGHFYEEHQNLNVEDEAQPSSVKTSKITNEQRRKLQLMLGKSAVDLEGERFNSTMGNPRKEFLIDSLTAIINHPSDPLKLKKHRFKLKRYKKCFLGIDLSRKLQKRLDISKTDTLNVITEMMGQQMFSPVDKSQQYFINGKFYYFLNDAVYKEVKRRSVFVEYESSDNDSVQKSQDLEEVRRSHEKKSRSRDRKSKKSNRKLSHFKSTVDSKSLESLDKDKSNESSESSRDAAVNLFEMLAFPVRDGEAPEKEIFGKEAKSETKISMEYLKKITSLESKEKNKNMSAEQKHSRCDKKSSTRKNNVINNKTEEDKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL4</accession>
    <name>A0ABV2ALL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphatidylinositol-3,4,5-trisphosphate binding</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ARAP1</name>
        <name evidence="3" type="ORF">MHBO_002207</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000729">
        <property type="protein sequence ID" value="MES1920545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12752:SF9">
        <property type="entry name" value="KRAMER, ISOFORM I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12752">
        <property type="entry name" value="PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00169">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00233">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50003">
        <property type="entry name" value="PH_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PH" evidence="2">
        <location>
            <begin position="27"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="252"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="31284" checksum="2AFD8EEA4D69FDDA" modified="2025-10-08" version="1">MSTARRSIFEQESSISIEITKSDLAKRTFHQSWLVKRGGFKSGIKHWKKRFFVLKEDYLYYFKNLEAEKPLGKFSTKHLSTTLIGEKKESRNFAFVTYERTIYARAYSVQERNKWCDAVKSLQQKILENSRERALSTEKLVVEIKDLKKAIPPSSPTPPEMTSKNNTEMNTLNTILSDEIVLRSSNSLGHKAFQVVPRHGVQPRAARLLAGSARVYPRSGRAREEQFSEGGAETSHRLLDSHLRQIRLRRPGHNRFRPNSRSTSGKICANRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALS2</accession>
    <name>A0ABV2ALS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Syntaxin-2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">STX2</name>
        <name evidence="9" type="ORF">MHBO_002241</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the syntaxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000751">
        <property type="protein sequence ID" value="MES1920585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15848">
        <property type="entry name" value="SNARE_syntaxin1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010989">
        <property type="entry name" value="SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045242">
        <property type="entry name" value="Syntaxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006012">
        <property type="entry name" value="Syntaxin/epimorphin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006011">
        <property type="entry name" value="Syntaxin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957:SF307">
        <property type="entry name" value="PROTEIN SSO1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00804">
        <property type="entry name" value="Syntaxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00397">
        <property type="entry name" value="t_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47661">
        <property type="entry name" value="t-snare proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00914">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="8">
        <location>
            <begin position="198"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="184"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="31650" checksum="C9E3568AA7CB0441" modified="2025-10-08" version="1">MQSRLDELRNIEQKSDSHISSKSEKIKNNDEVRQFMKCFEDFGDNILAIKECSKNIKKLEAQANEERIPYEDIFAELNVTIGESRTEAKTANDKIINGKKILENFEKSKSKEPQNGSTTLLKNILDTNLSEFQSVTRQFNTSSEAFRESLRSKIKRRAKVVHKDLSDQQLENLVNSPDPGSFLRKQLQVVHDDVLQRVEEIEERYENIKKIEEGVLEINRMFNDLAILVELQDEKLQVIEENVLATKERVVHANEELEAAKGLQKKANRCCVLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV1</accession>
    <name>A0ABV2ALV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002288</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000780">
        <property type="protein sequence ID" value="MES1920635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="390" mass="44730" checksum="82AB36E4F0531588" modified="2025-10-08" version="1">MNYPENFISTVDYDNDTTGILKAISSIKNFIKLDEFETDEKTGLPKLLLLASEDLERPTFSYPSKYGLAITTVQPRASPNSLLPLFHDEKGCKKVPKYILFVAPETDKKITPRNAIYLDSQNKRVEDPISVGEAETKDGAKFFVFYPKFRDILNREALEETRKLVAAIAEDLSAETGSQNYTQKLQNITRGIEQSFDDFVSYFKQLRENSAKLREVFRNNMDWDVCISASEATEFSVPFRKEVERLNRIKDESGFELEKNEELLQKLSKLTMTVKTMDDYIENENRCALAKQSIKHSINESENELLYIMDHCLKADKFESADKAWKCLENNSSFFGQMSGRENNYDGRVELRVRFALELKYSVSGRLFGEMAVGGMKKMDVPKALLAMQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY5</accession>
    <name>A0ABV2ALY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002323</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000800">
        <property type="protein sequence ID" value="MES1920676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050117">
        <property type="entry name" value="MAPK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24055">
        <property type="entry name" value="MITOGEN-ACTIVATED PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="4">
        <location>
            <begin position="1"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="223"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="264"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="227"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="272"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="302" mass="35168" checksum="38F5EAFC42E11535" modified="2025-10-08" version="1">MANPEIKFEEKNIKFYMKNLFEALYYLQEKCKVLHRDIKSSNILVGNDDSVKLGDFGLARLLRCDGRKHYTKTVVTLWYRAPELLFGESCYDGAVDIWSAGCVLAEMYLRKPLFPGNTEAEQIDRICSVVGTPSKDSYPEGLNFDVRCSKKYPRDFSRMKIVKDKSPLAFDLLTKILVLDPKKRLTAEKILDHDYFHIGDKAEPLDLFFSFSLRRHILPSHEFESQKRRRERREKTRNKKEKSKNIEPKEDLFDGEELKKLKEERLERENVQIESDSLSEFSSNDENVHSGSEPGEIVVQSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM12</accession>
    <name>A0ABV2AM12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002316</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000795">
        <property type="protein sequence ID" value="MES1920667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10676" checksum="ABB213A007A6A0DC" modified="2025-10-08" version="1">MSLGRKLCRNWLFSRNLKISRLRLSQNRFFCEAKTEKNKDKNINSDKAKEEAKIETKSDKIRKDKIKTIGKFYQALIKKGKFCEYKNRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM21</accession>
    <name>A0ABV2AM21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002356</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000819">
        <property type="protein sequence ID" value="MES1920713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8560" checksum="E76E11983246BD77" modified="2025-10-08" version="1">MKCISHIRISNPRVRDDGSHRCECLRKKITDPKMKEDNLKAIKNFKDHLRAAKLERLSYRKSVYDVADEMAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA7</accession>
    <name>A0ABV2AMA7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein S7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002106</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000671">
        <property type="protein sequence ID" value="MES1920437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="171" mass="20692" checksum="F73E1921B37F2128" modified="2025-10-08" version="1">MNFQTKKELSEKIKTLINKNTITNTNKLTEIFIDYIEQNENFSFLEMENPLKRKEIFLEQTLKLLKAKVVKLSKFFKQKKPTKFFGQNRQNKLFYKKSLEIISEFVHSEYLNHLLKFYKIDFFEIFSLENAPIKRLSKQKKSNKTISKKHKILTKFNRKSKLYSENKKMSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM6</accession>
    <name>A0ABV2AMM6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BRCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002218</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000735">
        <property type="protein sequence ID" value="MES1920557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17731">
        <property type="entry name" value="BRCT_TopBP1_rpt2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd17738">
        <property type="entry name" value="BRCT_TopBP1_rpt7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059215">
        <property type="entry name" value="BRCT2_TopBP1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13561">
        <property type="entry name" value="DNA REPLICATION REGULATOR DPB11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13561:SF20">
        <property type="entry name" value="DNA TOPOISOMERASE 2-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12738">
        <property type="entry name" value="PTCB-BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00292">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="94"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="184"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="421"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="560"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="316"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="322"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="333"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="760" mass="87321" checksum="6B3BE3BA2ED7D51C" modified="2025-10-08" version="1">MPVNTIACFSETLYLKISALFPKIQIVKVPLDVDTIESTFSKNCLFVLNWEFLQYLDLSMLKTDYVVGDKHFLSKTSNLKNCKIFSEIEKMVEERKNLLKNVKIGYFPSFDNSIHMKSFANSLGAILITDFDIKNTKKVDYIISDLSFHYSSKKPKKLTAKVLEKEWIGRCFQSCEIVNTKIYEFKPPFFGQIVSVTGLSEIERNKIKRTIIEKGGKYSGPLNKKCTLLLSKKPEGRKYQFAKSNGIKTMHPNYIDCFLQSKGNLSKKEMKILEIDNFQIVENSPILKIEKNRKRKKEKMKLLCEHIKKQFPENCENENNKKSLSSSKLSKTFPEDEKSENLTDKRKFKKRFVHSQNEIDIIVQKKNAKGSCHRQNQNGQKELDFYSQDVAPLSSNKRENAFNKDEDFFNKNEEKIEFDDENGDYLSSICVFLTGLNDEDFRKSVQIIRASGATRLPLITEELTHIVCGSEEFSNALNKAKLDIDMVDIVSFEWLSQCYRQKREIGTEKYLLKKNVSEKKSDFGEFNKNISTFNNDNSTSKKSKVSEKGFKNKKNVCRKIFVLSGLSQNFKDLLGDKIESLGGTVVEDVYNDEAKEKCSHLICGNVSRSIKVITAIVRGIWILNVNYILFSAKNNKFLDEKEFQCGTTKKCTKFANIVYKAVQKARSLEKPMFSGIKVLYYKEKSGKTFNDLKSVFVAGGVDCFCNKFDGCFLPTHVISESPMFEDEIKNELISKKMNVDKIVFTSPKMIIDVIMKGGFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM9</accession>
    <name>A0ABV2AMM9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Reverse transcriptase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000854">
        <property type="protein sequence ID" value="MES1920769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01650">
        <property type="entry name" value="RT_nLTR_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052560">
        <property type="entry name" value="RdDP_mobile_element"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000477">
        <property type="entry name" value="RT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36688">
        <property type="entry name" value="ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36688:SF1">
        <property type="entry name" value="ENDONUCLEASE_EXONUCLEASE_PHOSPHATASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00078">
        <property type="entry name" value="RVT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50878">
        <property type="entry name" value="RT_POL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Reverse transcriptase" evidence="2">
        <location>
            <begin position="163"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="730" mass="85482" checksum="57E48CC09AB5BD17" modified="2025-10-08" version="1">MKDIREKIRRKNKALRNYRKDRCPENKKILRNLSQEIKKHIKEAKRKYWDKITSKMNSKDVHRLFRHLLGKKKSTKKLEKITEDNIASTFGYTDGERSHNDKHDSGSPRWKSHTTNFIKYENCREIIKSLAKNKAPGIDGINNFMIQFGGEFLCEKITDLYNRMFDARWYPMEWNEAIVVPIPKGNKKITCENLRPISLLPGFAKIFEKLILMKLCKMENFMNVIPKNQYGFIRGLSTREPLQILKSDILSNIHFRKSTFAVFVDLTKAYDSVNRDKLTRKIALKLRESETEQKIFGFIEHFLGRRKLRIRVNGEHGKMFEAKSGVPQGSPLSPLLFNYYSADLLKTDCKSLGYADDIVLYAEGPNKIDCEHAIENSITYFAETCKQLELKISYKKTKAVYFTRSRSKYEKNFNFDGKQIEIVEKFQYLGVELDNKLTMKNHIDTLRSKTRRACSAIYYLGRSLGGLNTRQYLMLFKTHVQPKIDYGSEVVLGSCKTNIDRIRATEHRTLTAVIGVDKGCSKQEALSISECIQTETRWALRASKFFGELLLKHREIFNRIISKKNHGFSRKTQAVKATERILQDFGYVQIANEKLIKKLIKQKMIKSTIERLEKKEYRKLMVRFLQTNQSLYASKNNRFEDVLTTKILLERLPFQKLLKSRNKSSSEMCKTCQKVDTAQHKIFECEQLDENRKLYLGERRLTNIDRQVDLLLKKRKACAKMAWLALETLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMP1</accession>
    <name>A0ABV2AMP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000951">
        <property type="protein sequence ID" value="MES1920913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17825" checksum="F73B2B421A2A66AB" modified="2025-10-08" version="1">MSYFQTIFIISAFSQFKNVCIDKVPIEVDFVGMYEGSDIYECVGDYEMVVDSEAYTYFAPTNPDCKVVDGEIVYADVSCKKHARRMCYTNTIKEGIYFPNKNLIRKYPHGFNTTAYCYRNNETTLFACFDGVWQLQFGEIDEFCNQELQGIYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY7</accession>
    <name>A0ABV2AMY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001014">
        <property type="protein sequence ID" value="MES1921005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="51" mass="5657" checksum="2DC35C1A5A16785A" modified="2025-10-08" version="1">MFEPVKENNQPGSDTSSENETDSEGEPDSIDHVDALQAANGVDNWYVFNKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN76</accession>
    <name>A0ABV2AN76_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 5">Phosphoinositide phospholipase C</fullName>
            <ecNumber evidence="1 5">3.1.4.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PLCD1</name>
        <name evidence="7" type="ORF">MHBO_002681</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-4,5-bisphosphate) + H2O = 1D-myo-inositol 1,4,5-trisphosphate + a 1,2-diacyl-sn-glycerol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:33179"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17815"/>
            <dbReference type="ChEBI" id="CHEBI:58456"/>
            <dbReference type="ChEBI" id="CHEBI:203600"/>
            <dbReference type="EC" id="3.1.4.11"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.11" evidence="1 5"/>
    <dbReference type="EMBL" id="JBDODL010001077">
        <property type="protein sequence ID" value="MES1921095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004435">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd08558">
        <property type="entry name" value="PI-PLCc_eukaryota"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001192">
        <property type="entry name" value="PI-PLC_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000909">
        <property type="entry name" value="PLipase_C_PInositol-sp_X_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10336:SF36">
        <property type="entry name" value="1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE BETA-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10336">
        <property type="entry name" value="PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00388">
        <property type="entry name" value="PI-PLC-X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00390">
        <property type="entry name" value="PHPHLIPASEC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00148">
        <property type="entry name" value="PLCXc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50007">
        <property type="entry name" value="PIPLC_X_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="4 5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phosphatidylinositol-specific phospholipase C X" evidence="6">
        <location>
            <begin position="219"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="334" mass="38824" checksum="B43C12AFB3B3C4AB" modified="2025-10-08" version="1">MRKRVENDPSLGSRLFSIYCSSLRDPICMECKSEEQCDRWVSVLNFCVQITNIKNKSYEWFSLKCEWDASDKSQKGIFATLRKANIGITKREISAIFNKLSLSGRKRELSFDEFFEMRLKISHRKEFQSLFEQYAEPCTQEASVEKMSVAKFKKFLRCEQGESHDTKHVIAMMTQVLLKKSKEEMGKNSDLCFTKHDFVSYLGSEFTHPLDQWNLEQTMDMTRPLCDYFIATSHNTYLENYQYKGKSSAEMYVRALQNGCRCVEIDCWDGPNDHPVVYHGYTLTQKIGFGEVIKAIAEHAFDVSSYPLLISLENHCSAKNQLVLNFIFLTTFLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN84</accession>
    <name>A0ABV2AN84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002707</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001099">
        <property type="protein sequence ID" value="MES1921124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045964280" evidence="1">
        <location>
            <begin position="20"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="27345" checksum="9875CE7BDCFFC810" modified="2025-10-08" version="1">MSLIEKLLLSFIVSNFVQCQTCQHLSSYEKLCSDNSTHCSVFLELDTTPSRWNNCHEYCFSHGLKCKAAFDEMEDNCIGKSDIGCFSSKEDQICVCEQNRCPTYKEHKRITKCRGCDGYVKNLVLKYTGKEANVQIRQFINRERVTIFSGKVQTNQEIKLYGKDHDGSLGHKLFVKVGHCETAQIMTDCRHEISPGTKIGDWEVVRGESQFGGVDHPDCNSGRKGDPGVGSKVYNFFVRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ0</accession>
    <name>A0ABV2ANJ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">RNA helicase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002778</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001161">
        <property type="protein sequence ID" value="MES1921215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17950">
        <property type="entry name" value="DEADc_DDX39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="8">
        <location>
            <begin position="53"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="84"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="53"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="261" mass="29680" checksum="27E0578E7B198772" modified="2025-10-08" version="1">MPRKKATSNGVTNENAYDIDKEPLEDYEEPVEEVQEVNNQIQTKGSYAGKQAAGFRDFLLKPELLRAIGDCGFEHPSEVQQECIPVSAFGTDLICQAKSGMGKTAVFVLSVLQQIDPNAKELDTLVLCHCRELAFQICQEFNRLSKYLPSVKEMAVFGGIPEIKNIEQLSKDRPQIVIGTPGRVLSLVERQALDLSNLKRFILDECDKMLESLDMRYTVQQIFKRTPREKQVLMFSATIKDDVRKVCKKFAREVFTKLRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANL5</accession>
    <name>A0ABV2ANL5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Kringle domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002642</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001046">
        <property type="protein sequence ID" value="MES1921044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.20.10">
        <property type="entry name" value="Plasminogen Kringle 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000001">
        <property type="entry name" value="Kringle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013806">
        <property type="entry name" value="Kringle-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038178">
        <property type="entry name" value="Kringle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00051">
        <property type="entry name" value="Kringle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00130">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57440">
        <property type="entry name" value="Kringle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50070">
        <property type="entry name" value="KRINGLE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0420">Kringle</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kringle" evidence="4">
        <location>
            <begin position="21"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="5">
        <location>
            <begin position="91"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="293"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="312" mass="36113" checksum="725DDD49B144B5ED" modified="2025-10-08" version="1">MLDFLNIDFSRIETTSPPVSEKCTGIGLDYRGNLASSVSGKQCLQWSSFYKNLYKEAGIGEHNYCRNPLFDTNGVFCIVEYNGDQDIVEHCDKKCTSGFLVEKHNFFCDKFEVLLEYGPFTDCQERCLSNPDCKYFIYKDNDNNCLRCLALDSSNEIKGGYNYGGEMYKKYGEESNIYCKLRMKDLESASIDTTFCRSSNRNGLVNVFDCNVKCNQNYVGNVNILCNNSEDYFVVDDQCKRLLFDHKKLCLKLFFFAHLKQKNCYIITNNVALYAINKNCHAILNKRVATSRPRKRKKTTSIWKTAKRRRQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANL7</accession>
    <name>A0ABV2ANL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Centrin, EF-hand protein, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CETN2</name>
        <name evidence="7" type="ORF">MHBO_002684</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the centrin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001081">
        <property type="protein sequence ID" value="MES1921099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050230">
        <property type="entry name" value="CALM/Myosin/TropC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048:SF59">
        <property type="entry name" value="EF-HAND SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048">
        <property type="entry name" value="MYOSIN LIGHT CHAIN 1, 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="27"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="63"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="102"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="134"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19204" checksum="0551397398DB165F" modified="2025-10-08" version="1">MDKNEYDIQISKKRNLNIEEEIVLSKNLSKEYKEIFDIIDFNGDGRISVEELEIAFNAVGIDSSNEEIKALFAKIDENGDDFIDFKEFLSILSLVEDPDPNELRKMFKKFDTDNSGGLNCDELIHGIKSLNIGILDEELKEVVEEIDFDENSEISYDRFVEMMMEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN0</accession>
    <name>A0ABV2ANN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidylprolyl isomerase domain and WD repeat containing protein 1</fullName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PPWD1</name>
        <name evidence="3" type="ORF">MHBO_002539</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000965">
        <property type="protein sequence ID" value="MES1920932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="69"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="46"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="20799" checksum="E04C87C3CBC7BC04" modified="2025-10-08" version="1" fragment="single">MSDELKSDIGPAMPPPNKTKSELQSHNISNNKKPKITSSFQNGDIVKTKNENEKSDLDELPNARHYERSFMHRANVTHVAFSKTDFAVTASADGVVKFWRRKRWQKRRDCLEFVKEFKAHKGALSCLVLSGDGLQLATASQSDCFVRFFDVVNFDMTFFAKIAVRPTCCEWIHAGRRGVSGELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANX0</accession>
    <name>A0ABV2ANX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">60S acidic ribosomal protein P1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">RPA1_2</name>
        <name evidence="8" type="ORF">MHBO_002896</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the replication factor A protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001279">
        <property type="protein sequence ID" value="MES1921362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04476">
        <property type="entry name" value="RPA1_DBD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047192">
        <property type="entry name" value="Euk_RPA1_DBD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013955">
        <property type="entry name" value="Rep_factor-A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031657">
        <property type="entry name" value="REPA_OB_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08646">
        <property type="entry name" value="Rep_fac-A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16900">
        <property type="entry name" value="REPA_OB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Replication protein A OB" evidence="7">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="Replication factor A C-terminal" evidence="6">
        <location>
            <begin position="114"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="278" mass="30306" checksum="E2F1A0928B7EACA0" modified="2025-10-08" version="1" fragment="single">VELTLWSEAAAKFDEEALKDNPVVSIKAARVSHFGGRSLSLSGSSNMVVNPDLQDVYRLKSWYLSEGKNASVPVLSGNSGASVAAITDSDKVIDLCEVSDRQLGSDQNGAGDVFVVKATIMSIRHDFAKPPFYFACSKARDGRTCNKKASKVDSAGSEEFWCEMCNSVTEARARYILNFSLNDHTGSQFVNCFDEVGEKILGVAAGDLSKLAEGPLADEAAFGDVFLKAAFQTKLYKIKAKSENYLDEERIRCTVLAVQDIDFVNQSVKLLEKLNLMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB5</accession>
    <name>A0ABV2APB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="6">PPIase</shortName>
            <ecNumber evidence="6">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">CYP59</name>
        <name evidence="8" type="ORF">MHBO_003039</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010001432">
        <property type="protein sequence ID" value="MES1921513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035542">
        <property type="entry name" value="CRIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024936">
        <property type="entry name" value="Cyclophilin-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45843">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45843:SF1">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001467">
        <property type="entry name" value="Peptidylpro_ismrse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 6" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="7">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15459" checksum="EDCBDA5B7682CF20" modified="2025-10-08" version="1">MAVLFETSVGDFVIDLYTRNSPATSLNFIKLCKAKYYNNNIFHRVIKNLLVQSGDPTGSGEGGRCIFNLIDRTKSRFIKDEIKKKALHKVLKFSFPENFQFGSVCMASAGKNKIASQFFVVTSKKFLTKSTNLQVNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APD3</accession>
    <name>A0ABV2APD3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002817</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001202">
        <property type="protein sequence ID" value="MES1921263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="25876" checksum="50A34B8BD7306B2D" modified="2025-10-08" version="1">MPSSGNFGSTLQNSENIAKNDNTKNYISAPTDFPSLSQTQTFPFNINAKSFDSGNDKTKSLNAKSAFEQNDFGTIPSNSPWSQNVGNSAFGNEGDNKSVLSAFSFGNFRNGDNIFGNFDGNNDKKNEDNNADIFKNFIGSNVNTGEDNSGDKNDDREEGQLIEDKVKDFLIGEIKDDVIGGNNSSSSEEKIEDFEEIDGVKYKKWEIEQFAAENDFDCVPITFPVENVVWKNFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE2</accession>
    <name>A0ABV2APE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003056</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001447">
        <property type="protein sequence ID" value="MES1921530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="8485" checksum="4B11B195B975E401" modified="2025-10-08" version="1">MDVTDPGDVIVHGSDTSEFISADSHSEEEPQYSSEQARNTNCDSSSDGNGTCRARGERVSRPPPRLTYDHIGQPSSYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API5</accession>
    <name>A0ABV2API5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003107</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001498">
        <property type="protein sequence ID" value="MES1921575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.50">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13373" checksum="7F6CBFEDA7EC2B6F" modified="2025-10-08" version="1">MKFNLTVAILRGLENDQVKKFLEMGAKENPKVGNKLANEIVETMNLLIKKKLKKLTEENLSEFFKLLEEAKFYYEKENREQKWFEMVESTADNIENPWISEKIIEWKSIHSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK1</accession>
    <name>A0ABV2APK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Proteasome subunit alpha type-6, variant 2</fullName>
            <ecNumber evidence="2">3.4.25.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PSMA6</name>
        <name evidence="2" type="ORF">MHBO_003135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001542">
        <property type="protein sequence ID" value="MES1921606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14164" checksum="167E1E70FC163EB3" modified="2025-10-08" version="1">MANLAQLCTQHAYMRALGVVLIFGSFAKKDGAEIYRCDPTGIFDGFTACAAGIKEQEAMSTLEQSLKDEPKMTFEKTIEIAVNTIQKVAGADLKADELEIAVVNKNGFKEYSEKDIEERITLIHESKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM6</accession>
    <name>A0ABV2APM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003155</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001566">
        <property type="protein sequence ID" value="MES1921628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046199825" evidence="2">
        <location>
            <begin position="18"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="227"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="265" mass="30206" checksum="70C887A041E8242E" modified="2025-10-08" version="1">MSLLSFFWIIFFIPIRTKTVLQIKVDTIFLTHCASLKNGGLNGVKNAFTRANNYSRETLGFVTEVSQYKVLKKDDKSTVDNTDCEKPSKVDLADFFNTQFIPLPAPKEVSIFGWVTTLDGLKNKPHTFTSDDFIDSDNNKLMMFAMNMNGAIDKFATQSMAKLMLAKDVERVDKNYLMNYLESAANITLTDKTSIMINFFHFLIVEDVFHYSNIKIITVNNEHPDGFFIGLIISAIANALLIVGLFIYGFFKRISRCCCRKKILY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR3</accession>
    <name>A0ABV2APR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003201</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001614">
        <property type="protein sequence ID" value="MES1921672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="entry name" value="TCP-1-like chaperonin intermediate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="GroEL apical domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="313" mass="34633" checksum="3F4667F1529FC0EF" modified="2025-10-08" version="1" fragment="single">EMAKISKNCYLLILNVSLEYEKTEVNSQFYFNNADQRAEMVSAERNKVNSRIDTIVALKQKVCSKDKTASFVVINQKGIDPLSLDRLNKNGIVALRRAKRRNMERLSLAFGGKAMNSTENLSEDCLGFAGSVTEKILGEERFTFVEGAKEPRSVTVLLRGNSKHILVQAKEALRDGLRAVKFAVDDRKVVPGAGSFELACAKHLETEIKNEKYGKSANGVKAFAEALMAIPKVLAQNSGLNMIESVRKLEEASNKTKSAVGLNLEDGEPMSPEDEGVWDNYRAKRQFLQLGAVMAENLMVVDEVIRAGKVDRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ01</accession>
    <name>A0ABV2AQ01_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SMC hinge domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003274</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001706">
        <property type="protein sequence ID" value="MES1921745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1060.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010935">
        <property type="entry name" value="SMC_hinge"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036277">
        <property type="entry name" value="SMC_hinge_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43977">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06470">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75553">
        <property type="entry name" value="Smc hinge domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC hinge" evidence="2">
        <location>
            <begin position="225"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="9"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="138"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="322" mass="37525" checksum="973D8EFD553D7787" modified="2025-10-08" version="1" fragment="single">DLEGHNSKIADLNKKLTEKKAILQNKNSAKQEEKRNLDDNNSSLTAIRQNFTKMQNNWNKNKQKFETFKKNQKKLKDKLSSLQGRKLGFSVESKNGESNEKISFSLAAQLMQNNKKKAEIESAVKNVDFKLKSRIEIKQKKEKESLKYKEEVEKYERNVKNERAKIDSLRDEIEGMREEVKKRENIKKEQLNLKRKMESLEMERDRLQTPFFNYRMKDPNFDDSQVFGFVAALIKLKDNKFLEAIETTAGGKLKNVVITSQKIGKQLLKFGQLEQRVTMIPLDKVRPRLLSAKLVEEAKRKSGCDQVKTALDCIDFDPKFQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ66</accession>
    <name>A0ABV2AQ66_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Anaphase-promoting complex subunit 4-like WD40 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003364</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001821">
        <property type="protein sequence ID" value="MES1921827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024977">
        <property type="entry name" value="Apc4-like_WD40_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033010">
        <property type="entry name" value="Cdc20/Fizzy"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918">
        <property type="entry name" value="CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918:SF1">
        <property type="entry name" value="FIZZY-RELATED PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12894">
        <property type="entry name" value="ANAPC4_WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="Anaphase-promoting complex subunit 4-like WD40" evidence="6">
        <location>
            <begin position="238"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="323"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="73"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="9"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="73"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF12894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="394" mass="43901" checksum="648B0604EB5C0486" modified="2025-10-08" version="1" fragment="single">SHNQERTPNKKPKISNYYKHAKKRSLPGDIYETPPKYGKEGEDVVYDRYIASRATSAVCSPFSKPLAFSKNFSTSDSLSVSSENPLDLGAPTPKSNKPPKPNLKNVKSETENSDQIQSRKIFCSDREKQRKLRKTRIRLEMPAERQLSFHTPKKKPRLPRVAANFETVPLANPRLRRALFPSAGRRIAQRPLRTLDAPGLRDNFYQSLLDWSARGCVAVALGRTVYLYNEHSHEVAALFSQGAGAPEVTALAWDGRGARLAVGLASGRVELWDAAASKLERALEGHRARVGRAAWRAGQLATGSKDRAVAVRDPRAKGGGTWLQQHKQEVCGLRWAPFSERALASGGNDNELLVWDVGEKAVSHTFSEHRAAVKAIDWSPHKVFCRVSFFIFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA5</accession>
    <name>A0ABV2AQA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003385</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001854">
        <property type="protein sequence ID" value="MES1921850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="30021" checksum="2A910F5EC4EED0EE" modified="2025-10-08" version="1">MTISYITSDENNQKTILVHNVQDINKLEIDAKGIEYDVYATEDPNKLAFRFEPHNNEVNKMVSMKYNGSQVKGTPVILRKRLPSIEHNADDNVFTLRDVDEGDKIRVKSSKGLNYNVYSDVNDEKTFHVSYENPGDLQNNVFLKYGDKNINKTAFKIGNVYEHRPGELLLSSRINKLNDDNEVHESDLPLLPSEKDAAKVYNLNKNNEHKLAAFDNVALAANNKLPKRTLYAPVEEKKNNNKLRFYRRHAIAKLQSDGKDVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE9</accession>
    <name>A0ABV2AQE9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003234</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001648">
        <property type="protein sequence ID" value="MES1921704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="88" mass="9574" checksum="AC4CF42B21FB7AD0" modified="2025-10-08" version="1">MHNPIKVAMLQCGIVGVNFTSTLEASSSTTTPSNEATPSCSSVSGCSGSAMCLRRSLVNFRTENFESVDRFSLRFDLRNMFVLAFGRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ1</accession>
    <name>A0ABV2AQQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003523</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002063">
        <property type="protein sequence ID" value="MES1922000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="200"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="305" mass="34018" checksum="C1107DAE63FCE67F" modified="2025-10-08" version="1" fragment="single">MRKFFPCQHSDMEEDCFRRYHSCNICGQTIDCDMADIDTSMINWKEPGRIALINMYLLLAACFGFMIYKAVTSPFYEIKTSLGVLLASLMKDTGSKSNSDEYKAQDSEQAGVCVNEIMFLIKAIAGGVLSSLEDSNPQFKKLIDTLSKLNNKQGSSSVGNFFDIIVKIMLLWEAVACQLLLLVITIVFTFYNEIELETEAIIVSIVLISGGAGSMLEFASTVNTLFALIPFIVLEIQNSTGWMWGIGSYALVFLTVLFRLVDRIAPPIDAKEPLDLDEQIFAADEDERNPLNVNLDLAEETIAKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR39</accession>
    <name>A0ABV2AR39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003652</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002267">
        <property type="protein sequence ID" value="MES1922138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="5972" checksum="9DE5BDE9357FBC03" modified="2025-10-08" version="1">MPVSDVAVRKSTGMTLDSVLRILIPSSKYTEKESAHFMEYLTLVSLKEYVYSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR50</accession>
    <name>A0ABV2AR50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003644</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002259">
        <property type="protein sequence ID" value="MES1922129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="25036" checksum="3109C6BDC2B5A960" modified="2025-10-08" version="1">MSLFLKRHKILCQSNRINSKHFCQKYFSQKSENQIDDKIPKENKQINDEEYSLHYDHDKLINEDEKFIQDIPGPNNDRTESIETQYQNWRIAKKPFEKRLDLIKKARIPSYKMLTDHLEEFAENSRLEDVKFQANHERKYNKEDAEKVLSHKPKPKEFKTRHFKKDFLDKNILSFKENPETYQKATYVSLLKSGIHYGIYSNWKSEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR62</accession>
    <name>A0ABV2AR62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003689</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002337">
        <property type="protein sequence ID" value="MES1922173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21962" checksum="38A7B5BA5BEF550B" modified="2025-10-08" version="1">MSQNRPNRRSLRLPTDNSKNLRKRNVLKSVQKIAIGSIHSQSRKTKRVSIIIKLRTTIGIKDIDEQDIELSLKHGAFEIFKDDNLASDSFFNQNIDEILSQRAITLNHTENKSLILAEENEVDLDMTWSDIWNENFYQKLKTLKNLKKLKRKEVFSKKLNFSSKYILKALETPKMVEIRTLLHYCRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD2</accession>
    <name>A0ABV2ARD2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003744</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002445">
        <property type="protein sequence ID" value="MES1922236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="148" mass="16901" checksum="E5A34C8B68F9B441" modified="2025-10-08" version="1">MAYNNNYKQHHESNSLLSFVEIDFGLPERSPSFSEPLSTSKYLFTDEKRIIDSIHKNDSAKNAPFTSAIAKNNANNLMLHIEGMGVCVLKEMPLSATFWDLYIQLASNYSNLKNRKINFSVGNRFLSNWEVSLDMAGIKEWDVIKIGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR0</accession>
    <name>A0ABV2ARR0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">POLR3B_4</name>
        <name evidence="8" type="ORF">MHBO_003733</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010002424">
        <property type="protein sequence ID" value="MES1922224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1110.10">
        <property type="entry name" value="RNA polymerase Rpb2, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007644">
        <property type="entry name" value="RNA_pol_bsu_protrusion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037034">
        <property type="entry name" value="RNA_pol_Rpb2_2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04563">
        <property type="entry name" value="RNA_pol_Rpb2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase beta subunit protrusion" evidence="7">
        <location>
            <begin position="1"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="29263" checksum="624A771B699278FC" modified="2025-10-08" version="1" fragment="single">YKDIHINQPSFEEEMCVVENVTPHECRLRDTTYSSSIVVDVEYVRNTTIVHKNNIKIGNIPMMLKSDKCILADKTEEELSYLEECPHDPGGYFIVNGTERVILIQEQVFKNRILVERNKDKNISASVTSSTEASKSRTEVYLKNERMFVRANKFTEDIPAVVLLKAMGLESDQEVVHIVGLDYLAVLSQSIEQCRSLGIDTAEQALQYIGNRIRYTKASKSNRTKTEEARFILISVVLSHIPSENFDFYEKGLFTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS02</accession>
    <name>A0ABV2AS02_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aldehyde dehydrogenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003954</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002816">
        <property type="protein sequence ID" value="MES1922440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012394">
        <property type="entry name" value="Aldehyde_DH_NAD(P)"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43570">
        <property type="entry name" value="ALDEHYDE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43570:SF16">
        <property type="entry name" value="ALDEHYDE DEHYDROGENASE TYPE III, ISOFORM Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="ALDH-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="Aldehyde dehydrogenase" evidence="6">
        <location>
            <begin position="2"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="14"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="33261" checksum="B70B04A3D9D39950" modified="2025-10-08" version="1">MTAAAKNLTPVTLELGGKNPVFVCDDADISLAARRIAWGKSMNMGQACVAPDYVLVNKKQTMQLCKRLAENLRKFYGKDERKWSECKDLGRIVNKRHFDRIKDMLQREKGDIVIGGTCCEEKLFIQPTVIVTDLNSPFMEKEIFGPVLVVIQTDSIDQSILIAKRFEKPLALYVFSFDVEKQKKILESVSSGGVAINDTLLQASVMSLPFGGVGHSGFGKNHGKSGFDLFSNKRSVLSNNGSFDWSIRYPPYSKKGIKLAKYCSLKSCYCTRFFNSNMVTMVFLSVLVFFILWVNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS05</accession>
    <name>A0ABV2AS05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003662</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002281">
        <property type="protein sequence ID" value="MES1922147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10705" checksum="3A8A26B55FE32963" modified="2025-10-08" version="1" fragment="single">IKRLIKILDGELDSILQKDMSPMETALLILLYRKHTEEIARNASNSHWKWEEGSLKKEYQKRRENIMTKRSIANTAIQKTTDEFMKEIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS81</accession>
    <name>A0ABV2AS81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003731</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002419">
        <property type="protein sequence ID" value="MES1922222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="17359" checksum="A2334D262AFA7ECC" modified="2025-10-08" version="1">MNIKIEGLKMNFAQRKENEKAIKNEIEAMTESVQKILKGEKIIFQNFENMEELFSADLGKKKLLIEENKNFVDVIFTEKDFENKKHVVTNIYDGTKEKIYKNGHNFLCFRVFKEDMSKNEGKSYEKVFVEGCRDFSSEILTDESSFSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN6</accession>
    <name>A0ABV2ASN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Presequence protease, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PITRM1</name>
        <name evidence="2" type="ORF">MHBO_004185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003372">
        <property type="protein sequence ID" value="MES1922667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055130">
        <property type="entry name" value="PreP_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43016">
        <property type="entry name" value="PRESEQUENCE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43016:SF13">
        <property type="entry name" value="PRESEQUENCE PROTEASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22516">
        <property type="entry name" value="PreP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Presequence protease mitochondrial-type C-terminal" evidence="1">
        <location>
            <begin position="4"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20054" checksum="E6C29D9145942625" modified="2025-10-08" version="1">MNWNYLHNEIRVKGNAYGSGAYQKYDIFGMYSLADPNCAKTLKTFQNCIEWASNDENKTENNKVEQMTENDVKKAILATFSTIDSPVSPSKRGKAFFVNGLSDETRQKIRDRLLKVDKKSILRVARKYLLGNSKFVGQNSKNGEISNASISVAGAVDVTEKKRLEDVLEWTEIQNNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS1</accession>
    <name>A0ABV2ASS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002787">
        <property type="protein sequence ID" value="MES1922432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11105" checksum="F217AD8F1D04C42E" modified="2025-10-08" version="1">MFFPGALLSYFGRVGTSEMNAACIVAFLNLRKYSGTVIRFVKMMFGNCYDSRDLEKFVSMMLMADAEFKEVEKNIKKTIKTSSKYYQRLLLSLLEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ7</accession>
    <name>A0ABV2ASZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">G protein subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">STE4_1</name>
        <name evidence="7" type="ORF">MHBO_004309</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the WD repeat G protein beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003713">
        <property type="protein sequence ID" value="MES1922785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016346">
        <property type="entry name" value="G-protein_beta_1-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001632">
        <property type="entry name" value="WD40_G-protein_beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19850">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00319">
        <property type="entry name" value="GPROTEINB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0807">Transducer</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="49"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="14"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11772" checksum="D10C62EBF720CBFF" modified="2025-10-08" version="1" fragment="single">MADQSKLIKELNDKIEELRGDPNNSPLRDFSSRKARTKPKLTIKNRKVLKGHFAKIYAISWSSTKKLVSASQDGKMIIWDAMSTNKIMAVPLKSSWVMTCSFSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT28</accession>
    <name>A0ABV2AT28_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tyrosine--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Tyrosyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_004068</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>tRNA(Tyr) + L-tyrosine + ATP = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10220"/>
            <dbReference type="Rhea" id="RHEA-COMP:9706"/>
            <dbReference type="Rhea" id="RHEA-COMP:9707"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78536"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003079">
        <property type="protein sequence ID" value="MES1922553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023617">
        <property type="entry name" value="Tyr-tRNA-ligase_arc/euk-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050489">
        <property type="entry name" value="Tyr-tRNA_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46264:SF4">
        <property type="entry name" value="TYROSINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46264">
        <property type="entry name" value="TYROSINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006588">
        <property type="entry name" value="TyrRS_arch_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="287" mass="32894" checksum="8B7D101C29A54941" modified="2025-10-08" version="1">MHIAQGLMKTTNVNKLTSSGIHFTFLVADWFAQLNNKFKGDLSKIRKVGQYFLEIWKACGMNLEHVSFVWSSEEVNKRPDEYWQMVMDIARKNSVARVKRCGQIMGRSGDADSAQNESLLRSIFRSREADAALNEDEFVRKHLPSARSDNQPVAQLLYPLMQCADVFFLRSSICQLGLDQLKVNVLAREYCDQLKGEKKRLRKPIVLSHPMLMGLKQGQAKMSKSNPDSAIFMEDSEAEVERKMKRAYCKPGDVEENPVLDYLDKVVFPWYGCNSDFLFVVTIIFCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT96</accession>
    <name>A0ABV2AT96_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">U3 small nucleolar RNA-associated protein 13 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004406</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003951">
        <property type="protein sequence ID" value="MES1922877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013934">
        <property type="entry name" value="Utp13_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08625">
        <property type="entry name" value="Utp13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="U3 small nucleolar RNA-associated protein 13 C-terminal" evidence="1">
        <location>
            <begin position="81"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23908" checksum="69DC8278C46A870F" modified="2025-10-08" version="1">MIFWDIKTKKLKEEKTINLKQKANCVAVSLNELILGDDEQIQIFEIGKQKSEIEQIDEKMAKGNFDNIIEEKKIDKIEKYENFLRNNNFQNAFEESIEIGSPKLLKKLFLKYKIGQNLPKSPNLTKNGLKNLIKMICEWTTSHRTQNLAQILLNWALITFSEKDFISVTNEKQLSVLAFFSNKKFANAKNLLTDSRFFGVFDVYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG3</accession>
    <name>A0ABV2ATG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004211</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003429">
        <property type="protein sequence ID" value="MES1922688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46655">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46655:SF1">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="30220" checksum="8DBC8C4BAEE5A486" modified="2025-10-08" version="1" fragment="single">YLYLDSRQNQSLNLSFTTIKKSAIAYRGLTRKDIRKKLKTKLENGCKEYQCCLPKITIDNKIESVNQNCHCYKDFVECGDNCFCSKFKQHCTNRPLQQKKQYGKLEKLIPCSLRGIDPFTRRRIYKLMRNDIEKSDKNLFINKVIIKFLQKQCLENKNTNFINCLKIVAKNFKTFVKNAKILQNKNLSPFSESLDIILNEALKNPEHFQSHSKGTCVVVKENCDFSKNELIGEYIGEIYTSWRWFEQEQNLKRVRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATG4</accession>
    <name>A0ABV2ATG4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004136">
        <property type="protein sequence ID" value="MES1922954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18971" checksum="A29EAEC0A31CF163" modified="2025-10-08" version="1">MTDFSKNTKIEETGTEEKLLKLKIDLDKLLGKNPFDDLKSIKYDFSEKLDVEKLLKIAKKYSDFDLFSPAPNFMKFKASPHISYEQIEKSALQQNNIYAKKNVKKTEIINENNNKSVGEDFDFDNNLQKSIFGSNLQTKRKLETEQTFKIGFDSEEYSEDETN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN8</accession>
    <name>A0ABV2ATN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004572</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004435">
        <property type="protein sequence ID" value="MES1923038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18019" checksum="9DB6E0C75F78D5F7" modified="2025-10-08" version="1">MRSLLNDREIKILDDAIEQSVAMADYNRFRKNNSNTQNLRDVREGLRGKKFVDQINQLINSDEFVTAISVAKNIGKFSKKMKVPIFSKFAMMLNSVLKGLGVSSEYFIEKNNAKTMARIIHLLIDDISKGYIIDRSARKVRSIPSFKEFWKPIGTNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU04</accession>
    <name>A0ABV2AU04_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004688</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004882">
        <property type="protein sequence ID" value="MES1923143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24198">
        <property type="entry name" value="ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24198:SF169">
        <property type="entry name" value="NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="5"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="72"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="19936" checksum="ABB4B0656A2EC6B0" modified="2025-10-08" version="1" fragment="single">MTDQRGGNSAHYAAEGGHVEILKYLVEKGIEPQQLTHTKRTVLHIATSNGQHDFCKYILQTYSDILHLVDIHGWNALHFAAAQGHVEIFDTLVEFNLDVKAKSTKGDTVLHIACLKCRQEMCDRIVRAWPDLVKEQNKLNRTPIFSAAEGGDIAILKLLRHNNADAEIIAADNHTLLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU48</accession>
    <name>A0ABV2AU48_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">L-asparaginase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004719</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004991">
        <property type="protein sequence ID" value="MES1923176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1170">
        <property type="entry name" value="L-asparaginase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036152">
        <property type="entry name" value="Asp/glu_Ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006034">
        <property type="entry name" value="Asparaginase/glutaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027474">
        <property type="entry name" value="L-asparaginase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037152">
        <property type="entry name" value="L-asparaginase_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11707:SF28">
        <property type="entry name" value="60 KDA LYSOPHOSPHOLIPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11707">
        <property type="entry name" value="L-ASPARAGINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00710">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001220">
        <property type="entry name" value="L-ASNase_gatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500176">
        <property type="entry name" value="L_ASNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53774">
        <property type="entry name" value="Glutaminase/Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="L-asparaginase N-terminal" evidence="1">
        <location>
            <begin position="8"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7332" checksum="2F9C7179538DBCB4" modified="2025-10-08" version="1">MKDFAIMENKEMPKVDVVEWEESIDSSYITPQHWVKLVKQIEENYLKYDGFVILHGYLLQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU53</accession>
    <name>A0ABV2AU53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004493</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004173">
        <property type="protein sequence ID" value="MES1922961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="20533" checksum="E52FC30ECB56064B" modified="2025-10-08" version="1" fragment="single">TVKKAFDIIKPIKIIKNLDFNPFDIRRFFKIGENKETKKLFLLYLKLINLFKLLHPHSYFLAKLCSEIRTDLKKQKDLAKIVFEDFSEHIENLKSFNRKSLPNKESAECLSVECSEEDLEFEGEEDEEWNPDFEVEEEFGTLSRFPDSYRGTVVGRHFKDKLYLVVDVVGSTRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUD3</accession>
    <name>A0ABV2AUD3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">pyruvate kinase</fullName>
            <ecNumber evidence="4">2.7.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_004817</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the pyruvate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010005393">
        <property type="protein sequence ID" value="MES1923271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="entry name" value="Phosphoenolpyruvate-binding domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.33.10">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001697">
        <property type="entry name" value="Pyr_Knase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015793">
        <property type="entry name" value="Pyrv_Knase_brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015806">
        <property type="entry name" value="Pyrv_Knase_insert_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11817">
        <property type="entry name" value="PYRUVATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00224">
        <property type="entry name" value="PK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="Phosphoenolpyruvate/pyruvate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate kinase barrel" evidence="13">
        <location>
            <begin position="45"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1923271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="17901" checksum="830707AE337D01F5" modified="2025-10-08" version="1" fragment="single">MAQTLNRKSQTPIFRSVLPVLSEFNVNKVLNDNYLLKKDSGSKITKTKIVCTLGPSSNTERSIEDLLENGMKIARINLSHGSTVQNSRIINMVKKLSEQRGEFCSVMVETNGNAVRMAPTKNGEKILLKKDLFVNVKNGDIRNFYSDSNVIYVDYIDLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE8</accession>
    <name>A0ABV2AUE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005425">
        <property type="protein sequence ID" value="MES1923281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7546" checksum="7D35A51E8010531E" modified="2025-10-08" version="1">MNHHLLIGIPVDICMLTYSEKFKPRKPNADYKPKDYADKQYNESSIRSQVPVDRECTITMVSISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT0</accession>
    <name>A0ABV2AUT0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004900">
        <property type="protein sequence ID" value="MES1923152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6156" checksum="91EC6A57866DBDCC" modified="2025-10-08" version="1">MNRDIIDKYRASDSPSASRDRVAQNHDAVNIGYQELRDLRPSSPYDSIHLRIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW9</accession>
    <name>A0ABV2AUW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cleavage and polyadenylation specificity factor subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">CPSF1_5</name>
        <name evidence="1" type="ORF">MHBO_005019</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006242">
        <property type="protein sequence ID" value="MES1923447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="20816" checksum="40C9C733823F1C16" modified="2025-10-08" version="1" fragment="single">RHAVSEFACEVVDISFNLKQKSYSVFKRINHLPLDCQSVFTSKSFIDGALIFSPSLVLRITKEVDFAISLNDFAKLYKNHDAPIENFGEVQNFDNCKFAQISENVVLISKVDGKCFLLRFFDKKMILEKCSFELGTLPSQITLLNNSKLIFVASYNGDSLLIQIDKTETIENGKKLCVENGNNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV01</accession>
    <name>A0ABV2AV01_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006443">
        <property type="protein sequence ID" value="MES1923494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="19967" checksum="536678533DDF41CD" modified="2025-10-08" version="1" fragment="single">LIELAGEDAQEKLVSYLEAREKVAQVDLVDDQESNQLPATSEMSDELEAASGQIVAETATVAEFPIIEPYAVRIAIAKNNESFIYSMVLVNRSSNGCLVGQMDVFNSKQFSSVENAVVYGLAMAIDACNAHLPDFIGENKAETCVNILSNYAKDAEGNFIERYIRDLDLSGATFMANSKKDKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV61</accession>
    <name>A0ABV2AV61_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006667">
        <property type="protein sequence ID" value="MES1923529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="16926" checksum="23AAC89F49C7334F" modified="2025-10-08" version="1" fragment="single">FAEGDILILTTATDPEQRSWVNNGGNASTAADFEQLSSAYDSTEIKNLFSAGTGLAYSDGAYSITNGGVDTTQLADDSVTAGKIDATVAGDGLAQNVDGSLEVNVDDSTIEITTDAINVKDGGITEAKLSTAVQNKLANSYAETVGDGTATSFSITHSLDSNDIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV81</accession>
    <name>A0ABV2AV81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Translation initiation factor eIF-2 beta subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SUI3</name>
        <name evidence="5" type="ORF">MHBO_005148</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-2-beta/eIF-5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006878">
        <property type="protein sequence ID" value="MES1923556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045196">
        <property type="entry name" value="IF2/IF5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002735">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016189">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016190">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_Zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23001">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23001:SF3">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01873">
        <property type="entry name" value="eIF-5_eIF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00653">
        <property type="entry name" value="eIF2B_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100966">
        <property type="entry name" value="Translation initiation factor 2 beta, aIF2beta, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75689">
        <property type="entry name" value="Zinc-binding domain of translation initiation factor 2 beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Translation initiation factor IF2/IF5" evidence="4">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11678" checksum="9371D6567D52B2FA" modified="2025-10-08" version="1">MTFFATEMGTHTSIDKKGRMIIKGRLQPHNIERPLNSYINQYVKCHMCRKYTTHFKKDPNTRLLFLECDLCGSSRSVNQIRSLYHATSRADRIQAKKAAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV84</accession>
    <name>A0ABV2AV84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006998">
        <property type="protein sequence ID" value="MES1923584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13415" checksum="5CF2CDD0D0C70935" modified="2025-10-08" version="1">MHTVLGSLSGKSIIGLLELLSKLFMFYAWPKMALQEYHPFGVNTEQINLYNLSRRNIDVGERMFSWSLTRFLTPLPTYEEAQNGSPASALKAERQATQDAENDDNRSENRNGVFLTNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF0</accession>
    <name>A0ABV2AVF0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">MIF4G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004978</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic initiation factor 4G family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006062">
        <property type="protein sequence ID" value="MES1923411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23253">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23253:SF9">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="80"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="80"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="159" mass="18375" checksum="7A87D73C94BBC28A" modified="2025-10-08" version="1" fragment="single">MIRCIQKVTENPMPSEKDLDVLCKLLNTVGEKLDKEKSEDIIEMVKSIYARIDELLEKIPSGRNKFLLMDVIDIRKNGWKGLDVDPEKKPREAKKSQNTLKPTKRELKKTTKKSIKTLTEPINKNRINEWEKAGLLNVLSNNKNGSETKKYSKRKPRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF2</accession>
    <name>A0ABV2AVF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004941</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005894">
        <property type="protein sequence ID" value="MES1923377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="6963" checksum="B3D3E3FB04877F2E" modified="2025-10-08" version="1">MLAAVALGGELEGWNVDMLAAVALDRELEGWKVDILVAVALDRELEGWKIDMLVAVALDRELEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWE9</accession>
    <name>A0ABV2AWE9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005183</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007007">
        <property type="protein sequence ID" value="MES1923587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14173" checksum="74F67BAA3EDF5316" modified="2025-10-08" version="1" fragment="single">LAAWVDGLSEFMADISLLSDVETFSYEMQRGAKGPTKAAGEWRHKLKEGWKQAHSKAVETHLENDEQADFVQVIGSMIAKTSDVVPEDAIIVNDLREFPSLLGKEDSPRGYALPAGVAARWVFKERAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ADY5</accession>
    <name>A0ABV2ADY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000011</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17416" checksum="F06313C536E651C5" modified="2025-10-08" version="1">MAEKKFPKLRKILLENNNFMSEAKIKPLLFKKLKSTEWTRLRNFLIDRKVIKPCVVKSSSKRRQPGIILIDNKNKIQFSCEKKTENRVKEFDRLSKITDFRDGIGFYAFVNIVVFEAGSEGISYSALSKKLNLPEKTSAKEIAVSKVQTTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE92</accession>
    <name>A0ABV2AE92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000071</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000009">
        <property type="protein sequence ID" value="MES1918045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="18229" checksum="96F7642507C0CC09" modified="2025-10-08" version="1">MFPSIKRDFSKISFDLLNSLNRFKDPFVNLTDSEPSISIDSLVSASQGSKEIVYKIQNLNVKLNEKMIKLSIEALKTIGFFKWQKILEFLNSKNENIVINDESLKYCKILALLVINEICKKAFNSGDFDLSSKLAFILRTETNKVFCQILEIAVVEYCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEB9</accession>
    <name>A0ABV2AEB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000084</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="56"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24915" checksum="23E7CFEB4B516FDE" modified="2025-10-08" version="1">MLKKAKQLFQSLKPINWTPKLEKKLLKLYGKYDGNLTFENYREHTKTIQNEIRENMMNSKEDNAAIRDLRETLEDRYLMLDKVLQRQPNLAKSSDLEKLQSSLRKLNYNYKETKKIMEAFGVEKGLFKFNKWYKTQPNPAFKTFSKLQETYALMMLADYVKEYVSKQNFKMSEKWQKKTNGMPPYELMAFDDEYVNSVIKQNILSKIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AET3</accession>
    <name>A0ABV2AET3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Pre-rRNA-processing protein pno1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">PNO1</name>
        <name evidence="4" type="ORF">MHBO_000178</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd22392">
        <property type="entry name" value="KH-I_PNO1_rpt2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="entry name" value="K Homology domain, type 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055211">
        <property type="entry name" value="KH_PNO1_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12826">
        <property type="entry name" value="RIBONUCLEASE Y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12826:SF13">
        <property type="entry name" value="RNA-BINDING PROTEIN PNO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22891">
        <property type="entry name" value="KH_PNO1_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="K Homology" evidence="3">
        <location>
            <begin position="104"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="204" mass="23408" checksum="00A5A70F80D9648B" modified="2025-10-08" version="1">MSVELEEQRPKIKPIKKRKSDDTKSDFRFVRVPSNRKSILKKNWKDICDPIINQLKLQIRMNLAKGQIEIRKSPDTEIETALQKAYEFLKAFLSGFEVKDALAILRVDDIFIDSFMVTDVRKLPRGHLSRAIGRIVGKKGKTKFTIENATQTRIVVADQHIHLLGSFKNIRVAKATIVRLIVGSQPGKVYSQMQMVAARNKCRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF35</accession>
    <name>A0ABV2AF35_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000293</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="17"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24747" checksum="0252EC7F69EE90EB" modified="2025-10-08" version="1">MLKCVFPFIRNKRKSILQNSKSKKSKSVSIENSSENDSVEKTNQQTETNKLKNKNLNGFKCALDNKKDHHNKDDYNRKDECPLGHPAIVIKAEEGIYRCKNCQKFSEDSEDFLYCEECKFYRCRRCSSAIRNMENRSSYSVKSVKPGERLLVEVESEKSCSLHKSSLWASKSGNYKVSRKKGLFGKMLKQIKGKISKKVFTNFRDNLNVEERF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF94</accession>
    <name>A0ABV2AF94_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7147" checksum="7356B31A32365774" modified="2025-10-08" version="1">MATFSFWGVDINPKTKVQVFVPEDNVLNVCTAALIPENGDPTSGEKSTESASISILTAGKSLFSTKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE1</accession>
    <name>A0ABV2AFE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000379</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000058">
        <property type="protein sequence ID" value="MES1918411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="103"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="13815" checksum="0424DDF79B4059ED" modified="2025-10-08" version="1">MGIGKNEENESARKESGNQSDIRDATYETMLNASSNQSTNTENEKSESGIGSTRSEKKSRVSISVEMANGSYENVSNSDSERNNMETNESRSTTKLDGETSEYKLQSTGSESRASLESTDKSLYQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ6</accession>
    <name>A0ABV2AFZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000346</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000049">
        <property type="protein sequence ID" value="MES1918374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="7211" checksum="F72B446694D92CE8" modified="2025-10-08" version="1" fragment="single">IYKKKKTILIVIFWFIVFVLTCIFGYLFFVFFLKKIFCDKKKNEDEKVEADGYEILSDGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGE6</accession>
    <name>A0ABV2AGE6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribosomal protein S13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000504</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000082">
        <property type="protein sequence ID" value="MES1918549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.910.10">
        <property type="entry name" value="30s ribosomal protein s13, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027437">
        <property type="entry name" value="Rbsml_uS13_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001892">
        <property type="entry name" value="Ribosomal_uS13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_uS13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018269">
        <property type="entry name" value="Ribosomal_uS13_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871:SF1">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US13M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00416">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="S13-like H2TH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00646">
        <property type="entry name" value="RIBOSOMAL_S13_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50159">
        <property type="entry name" value="RIBOSOMAL_S13_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="111"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="146" mass="16967" checksum="F25B96EA78B3A92F" modified="2025-10-08" version="1">MSGAVKQKVLPELFQKAKPSTKLLYRIANIKGVGKTTARKITALVGYHDNTKFADVPISHLEYIQRYIKLTRKTFEDLKDFERENVERLIRIGSYRGLRHKLGLPCHGQRTKNNAKNARNNPYRKGISDFTWSKFRQRSESEDSNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS0</accession>
    <name>A0ABV2AGS0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Sm domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000740</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the snRNP Sm proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000137">
        <property type="protein sequence ID" value="MES1918842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01730">
        <property type="entry name" value="LSm3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034105">
        <property type="entry name" value="Lsm3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040002">
        <property type="entry name" value="Sm-like_LSM3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13110">
        <property type="entry name" value="U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Sm" evidence="9">
        <location>
            <begin position="26"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12602" checksum="56F0CC1CE0BAF198" modified="2025-10-08" version="1">MSNTVIAPSNLVPSKNANALAGAKSDPFELILMSLDEVIYVKCRNDVELKGKLHSYDEHLNIILEDVVETKAKKEFDVSVGEAILRKDIRRMDMLFVRGDAVMMISPPRRTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY7</accession>
    <name>A0ABV2AGY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000816</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000157">
        <property type="protein sequence ID" value="MES1918930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026971">
        <property type="entry name" value="CND1/NCAPD3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222">
        <property type="entry name" value="CONDENSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222:SF2">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="460"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="460" mass="53206" checksum="AE0BE503EADBF903" modified="2025-10-08" version="1" fragment="single">MEEEFNISLKYLDPKFYAKEAKTGFLAQCKHSRRLENLSVQNDVLSSIKNSVTNNSQFNPHSLWNHDTFDPLYQLCSKFPSLEPSIKRSVLEILCDAIENLVATIDFLKNVESDEKTALRNAAKIVSFLGCMAINTSEKFDQSDKNKWNWHFEKERIFGAIKSVINCKNIKRLWNLNTPEEGFYLILIKSAICFIFRSRFCYFLFFKEYGNMFFKTATTIFEAKHSTNSLSSTVFKMFGLNIENNSYLQLTLSATFTHMLLNREKFAPKIAKLYIFLVEKYKFEDIIGNIIREIGRLDDKNLSKNIKGAENIGIFLSEIAVNAPKIVYKNVDVLLPFLSGSSYKMRNGVIEIFGELIINLEILFEENLEDSVVSENKENNKKAKLVNSKELVTDEDEEVKNDNKENLDKDRNLDKNLTDKEKIENVLEKVGKLLDRIEERTLDVVSYTRNKALQVLKKLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH43</accession>
    <name>A0ABV2AH43_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GYF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000874</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000174">
        <property type="protein sequence ID" value="MES1918994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039905">
        <property type="entry name" value="CD2BP2/Lin1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003169">
        <property type="entry name" value="GYF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13138:SF3">
        <property type="entry name" value="CD2 ANTIGEN CYTOPLASMIC TAIL-BINDING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13138">
        <property type="entry name" value="PROTEIN LIN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00444">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55277">
        <property type="entry name" value="GYF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50829">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GYF" evidence="2">
        <location>
            <begin position="175"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="127"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="127"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="28151" checksum="C41D299BDB23CBCC" modified="2025-10-08" version="1">MSSFSEENDFEPFNLNEEREDSESDPWLDELSEMGSKAVHNRSKDIPIKEVKERPLTNSEVATIREKIASKMEEYERVNSYLARLSKFGSKTQLEDLMSDLDTVSIKYGDLEVYNRTREEMLEKAIKEKELDKKEKKPNQPKENSNKQIEIANEMPETPNSKYLEKIASELSLDDKVWEFEWIGDFSSTVEGPFSMKQLEEWNSKGSFSVKPIRIRRKNRKEWLHSENINRLVEICREK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH75</accession>
    <name>A0ABV2AH75_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000927</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000187">
        <property type="protein sequence ID" value="MES1919053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036543">
        <property type="entry name" value="Guanylate-bd_C_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48340">
        <property type="entry name" value="Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="74"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14597" checksum="CE20D71314155822" modified="2025-10-08" version="1">MDRSKTKTFSEEINEFCNGIDLSMRKLSSLVVEQSISKDPQKLKQIEQIVVQENAIEYYNKKLKSLFTIPPTTIDLLKQKHEKEVQQIEDLLKKEKDSLDVYQKRNILLKKAKMIAFYGEKVKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH81</accession>
    <name>A0ABV2AH81_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GYF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000712</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000130">
        <property type="protein sequence ID" value="MES1918809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003169">
        <property type="entry name" value="GYF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02213">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55277">
        <property type="entry name" value="GYF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50829">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GYF" evidence="2">
        <location>
            <begin position="73"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="139"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="22456" checksum="2A8CCAAC7D3EFB6C" modified="2025-10-08" version="1">MGESAYAPIQSRRDCDFAGQTNFVNNPNFPSTNIINAINNRKGPETNSRNSKIPDVHIDNIKRPDLQSPDYEEPKWFYVGQNGSEFGPFSSDQMRKWWFANKLSGDLIVRKERESLDMAKPIKERKCCFKHEQSYFDRLKSESSKNESEKPSEKPSRLSGRKLETRRKVVENISKLSAALDNIDSRNFNKNDNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC2</accession>
    <name>A0ABV2AHC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000749</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000140">
        <property type="protein sequence ID" value="MES1918854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="5876" checksum="D7EF26F6C76341B8" modified="2025-10-08" version="1">MLATGEAIRSAEFEHFDLSKVGRIIEDAQINQLFHVYSSEAIEGLVFERGSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI1</accession>
    <name>A0ABV2AHI1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Myosin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001009</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000209">
        <property type="protein sequence ID" value="MES1919145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140:SF706">
        <property type="entry name" value="DILUTE CLASS UNCONVENTIONAL MYOSIN, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140">
        <property type="entry name" value="MYOSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0505">Motor protein</keyword>
    <keyword evidence="3 6" id="KW-0518">Myosin</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myosin motor" evidence="7">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="region of interest" description="Actin-binding" evidence="6">
        <location>
            <begin position="16"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="9971" checksum="FAD07EC77F6FDA3C" modified="2025-10-08" version="1">MYKRKGSLATDFRNQLNKLLLKIRKTEPHFVRCLKPNIGNHPNTFDSALVMNQMKNAGLRVAIKVRSTGFVNIRQVTRTESRLKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK8</accession>
    <name>A0ABV2AHK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">PH-response regulator protein palA/rim20</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">RIM20</name>
        <name evidence="7" type="ORF">MHBO_000773</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endosome</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000147">
        <property type="protein sequence ID" value="MES1918878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.50">
        <property type="entry name" value="alix/aip1 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.280">
        <property type="entry name" value="alix/aip1 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025304">
        <property type="entry name" value="ALIX_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004328">
        <property type="entry name" value="BRO1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038499">
        <property type="entry name" value="BRO1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23030">
        <property type="entry name" value="PCD6 INTERACTING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23030:SF30">
        <property type="entry name" value="TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13949">
        <property type="entry name" value="ALIX_LYPXL_bnd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03097">
        <property type="entry name" value="BRO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51180">
        <property type="entry name" value="BRO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0967">Endosome</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BRO1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="364"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="436" mass="49970" checksum="DF0268B131B21A9A" modified="2025-10-08" version="1" fragment="single">MLKAASIYAFLVNETAEIPLKQRSMDMRQTALCFAALVAQAQAQTCFFEKAQADKFSIELISKLAMSVADLYKKAENNLEKDSALKEWIKKSDYPFHRHIESQKFLFQATACFWASKAALYSKKYGEEISWLKLSEENIDKAENIKKKGLHKNIERSRGELSELIAKELDRATDDNNSIYHYRVPNKKELVMPEPKLLAIMKKFRLEDLIKPEDRAHLDKLVPVSVAKVCKEVRNTLLSELELLASESNAQNERHSLVLGDFSAFFNSANGRKEMSDRFPNLLNDINSMKRHGGSRSIKMALENLGKSHLALKEKYGQIMLLLKSAKERHEFNVAKFGGYWNLPSPEQLAKNYFGEAETINKYLDDAYSSNQKMEKRYKDLEESLNFIESQSEEAILKTLPNIKSEFGDLPVIGEIRELCSVLEKCVNDKNEFIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV0</accession>
    <name>A0ABV2AHV0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000837</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000163">
        <property type="protein sequence ID" value="MES1918953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="449" mass="52886" checksum="22B446589FAB3F02" modified="2025-10-08" version="1" fragment="single">MTTLFKTSQNLIDLAFFDPKFIENKAFLLIKFCKLCDKIKSKQQINLFFAIFKHTKNIKNNEDYLINFATKILRTTKNQRLLHYFAQKFSIEKLDFVSFIDKISENVKNLEIIAKRSFLILLKNMAKNNLIDQCFPIIKIFILSIKSTQLKNICYSQLLFLSSFFECTDTKNLLSTFGDKIFILIFFEYYRDEENFHEITGILFNQSLNEFLKMNQKSIFPQTVINCDLEALKFLTERLKNDQKISKNFSKSIKLALNLQNFGKSIQFLQNLYKENFEDLLQKCVPKYIFNLACNSFSKTEFSENSKILLKLLKIDFGTDGETAKSSKFSNFIEKHFYCLIEKFAKGIQKNPGKNLKILRKILKIVNNEMIFAFAPRILTILMSTKNNSNFKKRIEKILVEMIPKLDKNIDKFMLPLIVVAEKHFIFSKKIEQILFKNEKIKDKNSRII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW0</accession>
    <name>A0ABV2AHW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001114</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000240">
        <property type="protein sequence ID" value="MES1919255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sushi" evidence="2">
        <location>
            <begin position="104"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="26948" checksum="9DC4830F1948B2E6" modified="2025-10-08" version="1">MENFCPPLSNGDWGTVDVGDASLGTILKIDCKKNFSHVKESAECAIIEGKGQWANGAVQCYRKPNYEINSVLIFDCIEHFVPPSKETVCVFNEVKQKLEWNGETNCTAINEYCPSIPEGDWGSVDVGDRSIGTNLKYSCCEGYNKPFNQPVTCREDVNGGSWYPSNGTECQMIKGCKNFEKRALFGHSYANNAIVGDQVYIKCAYGFDLPDKIAVCVKMNDLFEYWSGENECIAIEMYNGGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ4</accession>
    <name>A0ABV2AHZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000772</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000146">
        <property type="protein sequence ID" value="MES1918877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="108" mass="13165" checksum="EA24679A70DA9F40" modified="2025-10-08" version="1">MPILWMSNKIFNLNHVLKFGDKDCVERRVELTVYNKETMEIQFFKEIQLNLTKLSERDEFINTTSILKTYRSSFDSEKCRYFKQNQFGEWFLHRYFATLNSKGVYNRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI42</accession>
    <name>A0ABV2AI42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001028</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000214">
        <property type="protein sequence ID" value="MES1919164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="251" mass="28869" checksum="2B66E4E37FDB3C6B" modified="2025-10-08" version="1">MNCCSEANILRNQNPQWSENEQEDFVSKIKMCECIRSSLTKLVNKQKNIRSVMAELSKYTDNLVVQAERLNNAHENFRSIIAFLKVSRFLKKEMSVLKLGLAEILRSKLFQPLKNALEIHLNNVHDLKNVFVSKKKQDYVNSTLLKKEEEKSQMRSEVLEDLRLKVKHSGIDVETARSNLEKAVVEALTHMESEMSEMIMSSIELMRETFENMAKIEEPSGEMPTSQNYDIVKISQSVVANQQEEIKSEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI98</accession>
    <name>A0ABV2AI98_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001250</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000281">
        <property type="protein sequence ID" value="MES1919413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12247">
        <property type="entry name" value="RRM2_U1A_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10501">
        <property type="entry name" value="U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="41"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="12925" checksum="0C73A6B3CBA0B8B1" modified="2025-10-08" version="1" fragment="single">KVAYAKVDSDIITGKKSKLAEKREIQRKTDSAPAVSESPNNVLFLQNLPKEINAQTLISLFGKYQGFRQVRMIESKPGIAFVDFHTSFHAGVALSQLQDYPITEKHLMNVSYAKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF8</accession>
    <name>A0ABV2AIF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001272</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000290">
        <property type="protein sequence ID" value="MES1919438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045256602" evidence="2">
        <location>
            <begin position="22"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13401" checksum="01F42CEF9238C4EE" modified="2025-10-08" version="1">MAKKLFFYILSFLFIFAKSNEYTFCSAPKIPFGYIDQSCGKVLSPREKCKFFCNPLFKSSLKEIKCNEEGEIEHLPNCVFDVYWFVLSSNFAFLAFIFFISVIGVIFSYKKTKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG1</accession>
    <name>A0ABV2AIG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-hydroxy-3-methylglutaryl coenzyme A synthase</fullName>
            <ecNumber evidence="3">2.3.3.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ERG13</name>
        <name evidence="3" type="ORF">MHBO_001302</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.10" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000301">
        <property type="protein sequence ID" value="MES1919476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004421">
        <property type="term" value="F:hydroxymethylglutaryl-CoA synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00827">
        <property type="entry name" value="init_cond_enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013528">
        <property type="entry name" value="HMG_CoA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43323">
        <property type="entry name" value="3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43323:SF2">
        <property type="entry name" value="HYDROXYMETHYLGLUTARYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01154">
        <property type="entry name" value="HMG_CoA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Hydroxymethylglutaryl-coenzyme A synthase N-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13522" checksum="55548E2925CB07AE" modified="2025-10-08" version="1">MASYKIDYKNVGRLEVATETIQDHSKSIKTFLMQLFRESGNFNVEGIDSTNACYAATNAFFNSVAWIESSDWNGKYAIVVSVDIAEYENGPARPTGGWSSCVSRWAAIEHCFRKTFKIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG9</accession>
    <name>A0ABV2AIG9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Choline transporter-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001301</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Choline transporter.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the CTL (choline transporter-like) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000301">
        <property type="protein sequence ID" value="MES1919475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007603">
        <property type="entry name" value="Choline_transptr-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12385">
        <property type="entry name" value="CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12385:SF88">
        <property type="entry name" value="CHOLINE TRANSPORTER-LIKE PROTEIN CTL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04515">
        <property type="entry name" value="Choline_transpo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="76"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="119"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="150"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="209"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="292"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="329"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="351" mass="39537" checksum="E72ABC42D0921FBC" modified="2025-10-08" version="1">MSPNLNPNLLSKNVSKFKSKFKVGVILLSYIVGIALIFIFKHKPLCSLYCILVVYAASIVASFILIFVFYTRRTSFLILSAIVSLIFIVFVFLAVCRQIELTALYLKLASLIITKHIEIVYLSLFFNSILIIVTILTISSYYYFIRINKARLYVLYLILISFTSIWTYRTVFYLQFTICSEFAASIFLEKMARKKKKLADSATKILSGSLGTISLVTLIITLVEILVAVLKQLFYEVNTYLGCICGAILDFLEAIVKLLSELLLVHVAIDRNNFAKSYKATKKTMKNPNGSIITYVTTKILINACAFSGALIVFFVCKVVFERVGIADNVFYCLIAAMVFICDKSSIFLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK4</accession>
    <name>A0ABV2AIK4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Deoxyhypusine monooxygenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001324</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000310">
        <property type="protein sequence ID" value="MES1919504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004155">
        <property type="entry name" value="PBS_lyase_HEAT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12697:SF5">
        <property type="entry name" value="DEOXYHYPUSINE HYDROXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12697">
        <property type="entry name" value="PBS LYASE HEAT-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13646">
        <property type="entry name" value="HEAT_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00567">
        <property type="entry name" value="EZ_HEAT"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="242" mass="27102" checksum="33B3CE9E0A1D9FA7" modified="2025-10-08" version="1">MDLNTATSVLINESKPIAERMNAVFALKSLNNEKAIESLNSGFSSTSNLLTHEIAYVMGQMQNKYAIPFLNNILRNTENDSITRHEAGEALAAIGDPASILILSKFVNDEKVNVSETCILGMDTLKFKESNQWKQSTRFDSMDPAPPNGCSNVEKLSADLLNKKLSLFDRYSALFQLREIGTRRAVSGITKGFCDESSLFKHEIAYVLGQLQDESALESLEKVLRDENEHSMVRHEVFLRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV8</accession>
    <name>A0ABV2AIV8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Small subunit processome component, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">UTP23</name>
        <name evidence="4" type="ORF">MHBO_001409</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000340">
        <property type="protein sequence ID" value="MES1919610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1010">
        <property type="entry name" value="5'-nuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006984">
        <property type="entry name" value="Fcf1/UTP23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057776">
        <property type="entry name" value="UTP23_sensor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12416">
        <property type="entry name" value="RRNA-PROCESSING PROTEIN UTP23 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04900">
        <property type="entry name" value="Fcf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24779">
        <property type="entry name" value="UTP23_sensor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UTP23 sensor motif region" evidence="3">
        <location>
            <begin position="177"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="175"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="175"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="203"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF24779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="25582" checksum="B736B0EEF3922B5F" modified="2025-10-08" version="1">MGLKVNRTKKIKKALNFYRVNFGIKPPFKVIVEEHFVQQALESQIFIKDQIPKMLQSETVIYVTSCTLKMLQRMGSHYKGALLICKTFKELVCKHEDCNKNAINSLKCISEHLKQKNYVIAAQTLKLRKMVRSKLSNGKPVPLIFISGRVPNLEKPTERDLDFALKKERLKFGQKNKKVVKKIKNPNPLSCKKPTTKIDKNRSKNKRKRSRSKKKPFGLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE0</accession>
    <name>A0ABV2AJE0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001568</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000405">
        <property type="protein sequence ID" value="MES1919803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1085" mass="121544" checksum="A0BFA3B3FA0A969D" modified="2025-10-08" version="1">MAKSKSARAGATAFVRKFARKSEGVKIMNQLGFIPLVCSFISENIKNSPMVIESFDALIAAADHVVSISDNNLVLMADTALLALKDDPENIAVCKKALELLQKLADNSELIRSKLSEYERSSALSKFKNETDDLELKQLVDALKASLKGAKVAIDAEEILKKIEENSSKIEEKQTNEAILGETFNLSEQLVAASAEEKTLEKLRRLGAVGILGASIARIEKAAHSEMRDDVQRNLLSVLNALNADGAQCPKLLEAKFYDSLARMFSAQKASEGLKAEIRKSFAAFSAHRSEQFAAINVANSSNSSAQTLVPLIDNAAVLTQVLLQAPRDSHDGFKAVHGEIDVVVAIIKKHAGNPEVMLAATRLLDLLVSVDGDNRGYFTSTYVESLCRLTKENADNEEFCAAMLGLLNKYENDEGVATLISDLKNWYFNRSLETNLEVLKLHLLGEIYDRMDDEEKYNEVQRLLQRLMHCYDPKNELVDLAAEATKADQEVVKLVPFLLKQQTSEQVKMQVVALIWQMVASGKVERVFYDSGALALMIKGMKEAKSREERIVYIKALSPFLQSKDSAIRGLVQGEINNLLLSSIDMDENARMLLLEDVINGARDDQNNILLSSACLESLLALFEKQTTAEGKARVLHLIANMAGVSEECANTLVTESGLAITLNALEHNMESQGYVAEMTHFTVNLATHHDCVNGLFDAEVDSIMKGVMFQYTGEKDIFHNAQRTIDLMNLSRLDLTPEQHKKWMQRSRVKHFMTELCRALGIMISTVLTKGEREVRTGDTHYDISRECMRILNEFGPSFDEMIETDSSTVLLTLLGKAWLLRSVLMAYTFLVEKDVSARSIFNAPKEIKDTLVAKCGYTAMWDFENKEFESSLCAVRGGITHQSTRVFLDASVEPQTCQELDVVTKEPIGREYTLEDLISWVKLDTEEKDTLRCFNLVLIWVVNNWHLVTITASMLGNKPKDKPFNFKLIELDGEFLATRCGLTWNWPRILDETNGYLLNSDIKEKYPLVEQIKKDEKKGGVHIKVKISGEELRQKRREIKDTLEFSHSNVLTGDEKDSLDFFIDISNKVFTRLISTNHLKIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK9</accession>
    <name>A0ABV2AJK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000419">
        <property type="protein sequence ID" value="MES1919849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045414353" evidence="1">
        <location>
            <begin position="20"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13019" checksum="B2F6FE76F0565E35" modified="2025-10-08" version="1">MRGTEIIIVIFLFVLTIESENSVQNLNTPININILGSRNLSQCVDNISFVLGRKVDLKKDERVFLDCCENACTEEKEYLHIDFELTHVFYVPRFGFDNDEIDKYWVECFCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJP9</accession>
    <name>A0ABV2AJP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001399</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000336">
        <property type="protein sequence ID" value="MES1919598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="371" mass="43811" checksum="EB5254D7D7C7C699" modified="2025-10-08" version="1">MSYFEKRLESQLLRKGNYLSMKKHPSKNYSDAQRNFDLLFNKLKKHKDDPQIVSKSLKKIDDLYQNNRSAIDTTRPNIAILTQTLILNKNLQTIKTTEKLLFEIIGLNKDRLHFIDCLIIIFSVIPSYFENQKSFSVLAKIILAVEKIMRRKKAEHGVLSCSDMSKLLLNSTSYPRNNDIHITLINILDEHYSYLYFSKREIEVVSAYFEFLVESCNELVAMMIYYRVRKYLKDGMWRYESEDFMENMLERFAKKTRCYARPCLGMVREMIFMGRHVSVEYVKRITELVFQDFDIVETIEKDKFHVRAVFSFLAKAAQKVFFMFKIGIFCSESIKRVSANSFGSLREKISEEESESFVRIFGQLFKSGKEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR2</accession>
    <name>A0ABV2AJR2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001660</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000442">
        <property type="protein sequence ID" value="MES1919916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12398">
        <property type="entry name" value="RRM_CSTF2_RNA15_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.630">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.70">
        <property type="entry name" value="Transcription termination and cleavage factor, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025742">
        <property type="entry name" value="CSTF2_hinge"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038192">
        <property type="entry name" value="CSTF_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45735">
        <property type="entry name" value="CLEAVAGE STIMULATION FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45735:SF2">
        <property type="entry name" value="CLEAVAGE STIMULATION FACTOR SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14327">
        <property type="entry name" value="CSTF2_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="13"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="32753" checksum="934430F70EB55E95" modified="2025-10-08" version="1">MSHYQKPKNETSRCVFVGNIPYDSSEQELIQLFKNIGNVLSFRTVTDRDTGKPKGYGFCEFSDHQTAVRAIRTLNNIEFYGRALRVDYATVETNSSGDVDHISENQKSVYKTIPVQIEKPTLSEEIVNTIKTFSYNEKTEILENMKALIDQNRQGADLLLQTNPQLGQALLAILMTFNLVTSEEVKNLQEDDVRKRQIMMENNDLGGNDKDIELPMKSRQIDNNSNNKEQQKSDNKNKIMEQLPDGQREMLGKLLKLSDEQISKMPEQIQKKVYALKQKVAQNSNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK24</accession>
    <name>A0ABV2AK24_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000482">
        <property type="protein sequence ID" value="MES1920026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="64"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="301" mass="34820" checksum="5E522F276C9D26A4" modified="2025-10-08" version="1">MLMRRDRYNKNDCCEEPRYFNVRIPLPPHAKPGIPGCPGAPGAPGKPGRSIAGPVGPRGPSGAPGKPGMSGRPGSSGPRGMVGARGPAGACGAPGRNGTPGKPGMPGQAGCPGAPGLPGVSFGNNDEPEIPRERIAERLEERFSEDDEHRSKHYDEESLIERLLERLEKRHGKDDHHRHHYHHEESFLEKLLKRIEEWLEEREEHYHHHGHHHHKHGWKWLKKLVMELFEMEHHHGHHYYDESLLERFLKRLEEWLEELDEHHHHGHHHHKESLRELIAEFFEHEKDHEKYEERRYVRQIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS5</accession>
    <name>A0ABV2AKS5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Copine C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001787</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000498">
        <property type="protein sequence ID" value="MES1920064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010734">
        <property type="entry name" value="Copine_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07002">
        <property type="entry name" value="Copine"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Copine C-terminal" evidence="2">
        <location>
            <begin position="2"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="170"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="170"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23289" checksum="58EEC2AE250C63F3" modified="2025-10-08" version="1">MSFDNNKKTQSTYEEIWATYSKARDRVGFGASKTLSEVLKTAQLLVSSNCGNIEKYYVLFVLMTNGDFEDYKQQWCAFNELSNFPITVLILGIGPGSFAKHQDFIATLKIERKNVLFMDYSGLLRRQPNDDLLVENINTLLKRQICDYYSSKRTTPGDIAMNLQMRKQPSLQTNHQGFSQPNSNLMAQENYPNLSDPMMNPRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKZ1</accession>
    <name>A0ABV2AKZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002033</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000627">
        <property type="protein sequence ID" value="MES1920355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10667" checksum="FD07638E5871369D" modified="2025-10-08" version="1">MFQALVEAWIPILQALVEALLPMFQALVEAWLPMVQALVEAWIPMVQALVEALLPMFQALVEAWISMLQALVDLIKIQKTRMICQVKYLLYIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC8</accession>
    <name>A0ABV2ALC8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002129</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000685">
        <property type="protein sequence ID" value="MES1920464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="21243" checksum="CA3051C39E3463BE" modified="2025-10-08" version="1">MQIFRCLKQLRLFSSTCKNRRTMSTSTSKLSPTLFFTNEKHIALFTMLHCKFKITDDQKVGLPIETGSIHLDLRDKNGQIFLSKYVLNCTNCLSFLIDGNKTNLVQEHKTTDTAIELDISRKNGKVNFALKTFINDKQNYEKSSRFFLNEQETKILDIFLKDAVPKMNFSKQENTLWWLKDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALL8</accession>
    <name>A0ABV2ALL8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Reverse transcriptase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002233</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000744">
        <property type="protein sequence ID" value="MES1920576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="98" mass="11115" checksum="0673E67CED59456A" modified="2025-10-08" version="1">MLCGSLENLRLNQFNKDKLKKMINAFKIESYIKKYLCSFITNRSCGIKIRGNNSKKLNCPKGLLQSSIYSSSLFGVYNSVTGYADDFSYSFEHSTCAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALP2</accession>
    <name>A0ABV2ALP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002216</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000734">
        <property type="protein sequence ID" value="MES1920555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046592992" evidence="2">
        <location>
            <begin position="19"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="216"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="28652" checksum="B7AD85DA333113B6" modified="2025-10-08" version="1">MSEAFMISFCFLLQMISSDRLDFITFTSFVSPKTVSIEFEPLSPRFVECVATLKFSKENVVVTTRFDLCQTNSTPLSRLQFFEGYVTRPRYRYVIEIIKATDIPVYIGKSRFNLTDFAVFENFVEDVDGFKVHSKSNFSSEIFGFSIKFKKIEENIVKWEKWRKNNIGNVVKNNGKMSKNDFKNFPIKYFNFNNVIFENKIALGRKINGDREQFCFVGIFLLCAIFAILILIPVDILLLCKILKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM01</accession>
    <name>A0ABV2AM01_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ubiquitin-like protease family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002344</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000814">
        <property type="protein sequence ID" value="MES1920701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="70" mass="8271" checksum="41366FC91B91ACC5" modified="2025-10-08" version="1">MPGSDMILSKQVNSVDCGVYLLEYIERFCKAPFVDTTTRESLGKYFFTPQYIIEKRNKILDLIFKLKREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA1</accession>
    <name>A0ABV2AMA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002442</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000876">
        <property type="protein sequence ID" value="MES1920807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20745" checksum="1C5A37DA95B7F98C" modified="2025-10-08" version="1">MEEEISDYHNTLFHKVDDNNVKALIKAKNIISNCHQNSSRLQHLLEIAIRSENLNDENSRRLKIEEISDKFSTSNIDKKSTSIKKKYAKKQLILKWTANRLKTAHKTLLKFSENSKCLVIALEKLGKHFTITKNANLINLKDRNGVEINLEHKKSTIFEVKKIEKQINFRNFLIFRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA4</accession>
    <name>A0ABV2AMA4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">RPB1_2</name>
        <name evidence="14" type="ORF">MHBO_002429</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000868">
        <property type="protein sequence ID" value="MES1920794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045867">
        <property type="entry name" value="DNA-dir_RpoC_beta_prime"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000684">
        <property type="entry name" value="RNA_pol_II_repeat_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376:SF37">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05001">
        <property type="entry name" value="RNA_pol_Rpb1_R"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00115">
        <property type="entry name" value="RNA_POL_II_REPEAT"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 14" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 14" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="12" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="11" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 14" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="131"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="150"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="246"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="295"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1920794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="304" mass="32095" checksum="DAE48BD27545DA02" modified="2025-10-08" version="1">MTYRGHIMSITRSGINKMDTGPLMRCSFEETSEVLNDAAMFAEKDDLKGVSEQIMFGKLARVGTGAFDLLLDEKKLKQAVAVEDENDLEFDLFGAGEASPSLSTPSYGMTSPSGSPVTGLFSPIKGKFSPGATSPAAVSPNAMSPTDAKFSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNFSPTSPNYSPTSPFASKSSFSPNYSPSSPKYSPTSPTYSASTERKTESSSMSSPSSSFSEDSSSSPSLNSDDDKKMYSPSSPAYTPLSPRYEPSVGGEKDRDGKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG6</accession>
    <name>A0ABV2AMG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002467</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000903">
        <property type="protein sequence ID" value="MES1920841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="427" mass="50574" checksum="803C57E88C413A98" modified="2025-10-08" version="1" fragment="single">MGFFKSLKEAVKPNEETKFNRKIRNYFEKEFIDKLNKNENRIEKTANFLEKSLKFNQKRFYPVFTTFCLFEDLFTEINCNLIEELFKILEKHKSLIKSLIGKNEKSNLKLQKICKLINQRLLPSFEADLKNRISIFSQNIFTKNKFSQNITKKNFKINLKNKSDFAKNFNNLQNYMENPYDLLNSKSIDNFSQNVEYFLLNKNLLFGKDKNDFLNSQISSELSFSQLLNSYDVFETVFEDSRQSCIFLTQILIFLQFLNEKFKLRFGKSSKDKIKNLNLRLIKLLEQKFPNKIIMIKMIIDRNKNWLNFKTVKIPSFGNKKENLSEKQKPKLKTILKKDPNDYLFKVWPSQSIEEPILMGNLVLENIWKTNVTSSNPTIINSENFEEKFKRSKKYFCGKSDLSKFGKIGIPSVEKEKQKLQSLVKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI9</accession>
    <name>A0ABV2AMI9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA pseudouridine synthase</fullName>
            <ecNumber evidence="4">5.4.99.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">PUS1</name>
        <name evidence="6" type="ORF">MHBO_002493</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>uridine(38/39/40) in tRNA = pseudouridine(38/39/40) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:22376"/>
            <dbReference type="Rhea" id="RHEA-COMP:10085"/>
            <dbReference type="Rhea" id="RHEA-COMP:10087"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="EC" id="5.4.99.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the tRNA pseudouridine synthase TruA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.12" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000923">
        <property type="protein sequence ID" value="MES1920875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0160147">
        <property type="term" value="F:tRNA pseudouridine(38-40) synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.660">
        <property type="entry name" value="Pseudouridine synthase I, catalytic domain, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001406">
        <property type="entry name" value="PsdUridine_synth_TruA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020097">
        <property type="entry name" value="PsdUridine_synth_TruA_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020095">
        <property type="entry name" value="PsdUridine_synth_TruA_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11142">
        <property type="entry name" value="PSEUDOURIDYLATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11142:SF4">
        <property type="entry name" value="PSEUDOURIDYLATE SYNTHASE 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01416">
        <property type="entry name" value="PseudoU_synth_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Pseudouridine synthase I TruA alpha/beta" evidence="5">
        <location>
            <begin position="48"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="24784" checksum="2DB54402A8769AD7" modified="2025-10-08" version="1">MTIFPRKFDCHRNCSSRKYWYVFPSSIMPQNYFEGRLECLVRLNYILSLFEGAHFFHNFSRMKEASQKGFHTFQRYVNHFKVRTVFGYKGEEFIILEVEGQSFIYHQIRKMVAFAIRAIRKDDFSKSELERCFHRNCDQQIPLAPSVGLFLRSVGMSYIKSESALALVDSLLNSPKSESFIDEMILPEICEKALDEGEFEDWICSIEDEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AML8</accession>
    <name>A0ABV2AML8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002519</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PIGX family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000946">
        <property type="protein sequence ID" value="MES1920905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013233">
        <property type="entry name" value="PIG-X/PBN1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040039">
        <property type="entry name" value="PIGX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28650">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28650:SF1">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08320">
        <property type="entry name" value="PIG-X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0337">GPI-anchor biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0732">Signal</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045493151" description="Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" evidence="11">
        <location>
            <begin position="17"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="187"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="210" mass="23986" checksum="AA893E9C3CC028DF" modified="2025-10-08" version="1">MMTLFCFIVCLSGIDSLKIERKLKGSGFHRIMAIEISLSEFSKENNFGNDFEIKIKQNISKELIFDLFAFKKMAKNGKKCANFDVKIERFGAKDIEAPSFLITENSVEFSTKISRKMVRFVHSDFAKKSLKLDFPISFRYLSPSNLSFVAVKIPNPEIFVKKAKPNFQNFQVLEVLVPTGKVIDRLFVIWATFSIVILSTLIVICAIFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU5</accession>
    <name>A0ABV2AMU5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">LicD/FKTN/FKRP nucleotidyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000779">
        <property type="protein sequence ID" value="MES1920632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007074">
        <property type="entry name" value="LicD/FKTN/FKRP_NTP_transf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052942">
        <property type="entry name" value="LPS_cholinephosphotransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43404">
        <property type="entry name" value="LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43404:SF1">
        <property type="entry name" value="MNN4P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04991">
        <property type="entry name" value="LicD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LicD/FKTN/FKRP nucleotidyltransferase" evidence="1">
        <location>
            <begin position="97"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="300" mass="35484" checksum="99A17A979DBC2457" modified="2025-10-08" version="1">MLFLHNAKLFSFKSNFIHPIKIETIEKPIYYIDNSTKTKIPLAHSFTLTAFPEKPQTTFYESKDILDERLLPFKRRMSKQEFEKGVRLLQALSKAFKQNNVTWWLSHGTLLGQQYFQSVIPWDDDIDIKVVGAQLSIFRILSDFCRNNPTFKVSTFNSKNRMKIIKFYFRNGDEISGFTHKFPFVDIFPVQIGEKRVKHVTNALSREENLEDLFPLKNGLFGSFLFPIPRKPLKILTQNYFRGYGYWKYCINGYDHRRERATKRSKILAKYLFERYGFFDHEIKTFKKPGGDFAYALTDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV5</accession>
    <name>A0ABV2AMV5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002578</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000992">
        <property type="protein sequence ID" value="MES1920975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15297" checksum="6D7753C846FF6FFC" modified="2025-10-08" version="1" fragment="single">NVQDYEICFGHPYMAPNVDMNSVLNCFDAIKNSICYILCQKNFHIIGNNPTCVIQSLTGIYRWTSDYSCQINEPIEKDANHRIYMIYVMCGLAGSTGVIASIVRLIKSNTDWFYEEDDSFYNFSKENLISSFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN33</accession>
    <name>A0ABV2AN33_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002528</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000956">
        <property type="protein sequence ID" value="MES1920919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="104" mass="12438" checksum="9E39F77B753B981B" modified="2025-10-08" version="1" fragment="single">MFLFVARQIMSDYRNNLFIIFLRFHKFQGLRKSDFLARYIFVGMADDLFSNDYPFYKHSNLPGTTNPPNSDFFVSKRRFCQIKKELAKNQNTIIQLPFVRLITD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN81</accession>
    <name>A0ABV2AN81_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002564</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000983">
        <property type="protein sequence ID" value="MES1920964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21713" checksum="19AD9CD5D409C684" modified="2025-10-08" version="1">MMALGLDYLHKEQKYIHYDFKLENILLASDEKIRICDFGLSRRAGPNRSVDYKDVRTLRNIYTAQCAKPPELLYGSVLLYSFDTWGLGMVILSMCCGNIPDVMTSYTQYIDDIDHYLLEYFRRNASNENMSALYPLLIKLFEMNPVKRLCGQISNHLTQDPLIKKWIAKIKSGKDLNEKETFMLEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANF4</accession>
    <name>A0ABV2ANF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GTPase activator activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">RIN3</name>
        <name evidence="1" type="ORF">MHBO_002765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001146">
        <property type="protein sequence ID" value="MES1921199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="21694" checksum="CBEE2351DED0A453" modified="2025-10-08" version="1" fragment="single">MVYKFDWFSAIVPFGIAEIFDIFSLIMNFSIDYSLLVSTEENPLILSAFVQNKNDSVLWERWRKEENNSFTIIEPRIENQRLYFSKWSKPFLPRDPSHFTDLTKRVPWKNNNLEENWEWVEEWHPKVIPNLTDSDGWAYGRSFIGWSRKKPRKSFFDSTRSRFLVRKRVSDFRSDIVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH7</accession>
    <name>A0ABV2ANH7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002777</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001160">
        <property type="protein sequence ID" value="MES1921214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14187">
        <property type="entry name" value="ALPHA KINASE/ELONGATION FACTOR 2 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14187:SF5">
        <property type="entry name" value="HEAT SHOCK 70 KDA PROTEIN 12A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11431" checksum="180E49BD79A5A14D" modified="2025-10-08" version="1">MAGNSWILVAAIDFGTTYSGYAFSFKDKPMDLQSPQTWYAGTTQLASLKTPTCLLLNADQTFQSFGYEAQNKYATLAGDDAHHDVYFFERFKMFLHHSKVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANI8</accession>
    <name>A0ABV2ANI8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002618</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001019">
        <property type="protein sequence ID" value="MES1921014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20219" checksum="038575171912E804" modified="2025-10-08" version="1">MSSAEDVLAKTNLILTRTDDAKYKLSYNVLLENFRNLNGNGTFNYNFEPSLEDAKFFEKDSMQETTTVGENKLYILRINIKNTLFVKVFNFGTIQDSTIDLDPTKNGGGRLEKKIEYANEFLSVDDAGSLVLRDRTQKIKFICSRTTVLELEPNTDCLKIDFSVNADDEDGKGFKIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK0</accession>
    <name>A0ABV2ANK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002805</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001190">
        <property type="protein sequence ID" value="MES1921250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044712">
        <property type="entry name" value="SLC25A32-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45683">
        <property type="entry name" value="MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 8 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="20"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="12946" checksum="DCE696E35C021617" modified="2025-10-08" version="1">MYFYENARRLAVAVYGKNKLPLHATLPMGALTKSAAACITYPLLLIKARLYQPVEAGAVGGNKNKYKNFSHVATSVIRREGAAGFYKGLTAHLAKTAPGSAITFATYEYLIFLMNARW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANK7</accession>
    <name>A0ABV2ANK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002799</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001181">
        <property type="protein sequence ID" value="MES1921242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6803" checksum="550D554DA14BE1A8" modified="2025-10-08" version="1">MGKVSLYLDVFTGANRNIDRHFLSRREKRAVRFDKKVVLNRSLMKQHLLIDWSPTSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANL0</accession>
    <name>A0ABV2ANL0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phosphatidylinositol transfer protein N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002807</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001191">
        <property type="protein sequence ID" value="MES1921252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001666">
        <property type="entry name" value="PI_transfer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055261">
        <property type="entry name" value="PI_transfer_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10658">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL TRANSFER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10658:SF11">
        <property type="entry name" value="VIBRATOR, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02121">
        <property type="entry name" value="IP_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047418571" description="Phosphatidylinositol transfer protein N-terminal domain-containing protein" evidence="1">
        <location>
            <begin position="17"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphatidylinositol transfer protein N-terminal" evidence="2">
        <location>
            <begin position="11"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="22516" checksum="4851A5A2A57061DF" modified="2025-10-08" version="1">MKLLLLFSISNYSVVPLPMTIEEFQRGQIFSRAKRDEADCLNGEFSFTVKNEFRSHEKLGNVLFTERINYISKKLPNALKSIFTSLKEAKAIEKTFDNFPFVIDEYENQPFADSLKVSAQTFHKDDRGNSDPKTMFNLSSEEMKILQIINLNISKVNKKKKLKSFRPIFEGWIVFHNQIKITVDLANQLLKITI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN9</accession>
    <name>A0ABV2ANN9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002614</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001016">
        <property type="protein sequence ID" value="MES1921008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="358" mass="42189" checksum="D60C3833E9377E73" modified="2025-10-08" version="1" fragment="single">NSQLRNRKAKMSVNLKHFNFTLSHSSAENEKQRKNKIASERNKEFLKDQIDLNSPKISEFQKMRLVIQHFDNVKQFKPGYIGKERKKKLEQLINAATQFSDDYNFQYRFLIIALRLSMLENNLADLNILKLAVKAFKKFSHEEIIFSTAIELLHSQSKILNLRENCEDYFFNCVLDSVTKYPRIDQHLLLKCYEILIVLFDRKCLDLPVDSKWLVENGTNCLILSRNWAKSTNQTNTYHFIHFLLILSRHKQFLPFLSSKLKLLLDGFGDFLLEILNLFENMLNVSDPGVFPENSDEFLKAMTHILLCNASRAEIFIKTITLFLRCYPIFNEKLTEENFIKRLISIVKLHFDRKLILP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS3</accession>
    <name>A0ABV2ANS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002731</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001115">
        <property type="protein sequence ID" value="MES1921159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="25061" checksum="3B174813E1A58401" modified="2025-10-08" version="1">MSNIVCGSNKHRNGNNNNPKNDDNNKNGDKDNNSYKNLSEKDFPIKQYPVLHSFAAQNLDCDNEEDRKNDRLYNQLDNNEKVQSLKKNLNDTENNESVLFRKNNFVENKNILETTKPKISRDNKLLVTKINETERVPHKNCNDEKDIEYRKWSFKNDFKSGKNMRKLVLQRTGMKDKRIGGNRLIEKRYKKTIKKLIFDAEKMIEILRLLIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ7</accession>
    <name>A0ABV2ANZ7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PSP proline-rich domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002921</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001301">
        <property type="protein sequence ID" value="MES1921390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007180">
        <property type="entry name" value="DUF382"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006568">
        <property type="entry name" value="PSP_pro-rich"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052584">
        <property type="entry name" value="U2_snRNP_Complex_Component"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12785">
        <property type="entry name" value="SPLICING FACTOR 3B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12785:SF6">
        <property type="entry name" value="SPLICING FACTOR 3B SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04037">
        <property type="entry name" value="DUF382"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04046">
        <property type="entry name" value="PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00581">
        <property type="entry name" value="PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PSP proline-rich" evidence="2">
        <location>
            <begin position="265"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="358"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="101"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="358"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="374"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="394"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="424" mass="49263" checksum="98219D21E935EA2C" modified="2025-10-08" version="1">MANKRAAKRKRAKERKRILRKQQNAIKEKLQKQGQNSEPDDADLDYVVEMPSAMKDNETYKQIFEKLDPTKQNRSSEDDKNYPVETVAEGAAERLKAQAELSEEDSDSEDEEEKARLSNKKRKLRDRLTIAQLKQVVDRPDLVELHDPNSPDPTLLVLLKSARNSVPVPAHWCDKRRYLAGKRGVQKVVFQLPKAILDTGISDLRNPGKLATLKQKQRQRMNPKIGRLDVDYQKLHAAFFRNMVKPRMTSHGDIYYLGKENEVRYRKHRPGALSKRLRNALHMMENAPPPYLINMQRFGPPPSYPQLRIPGLNAPIPPGCKYGYGDCQWGKPPVNEVFFLILERLPAVRRPLRREFDVRAGGGEHDGGVSVGRSRRERELRGRIRRRGGEPIRRGGRRARRKRRGRTRRRRGREQRKRRLPENR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP83</accession>
    <name>A0ABV2AP83_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">RNA binding</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">exc-7_1</name>
        <name evidence="11" type="ORF">MHBO_003020</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001413">
        <property type="protein sequence ID" value="MES1921490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002343">
        <property type="entry name" value="Hud_Sxl_RNA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00961">
        <property type="entry name" value="HUDSXLRNA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 7" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RRM" evidence="9">
        <location>
            <begin position="22"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="9">
        <location>
            <begin position="108"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="9">
        <location>
            <begin position="202"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="10">
        <location>
            <begin position="294"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="7">
        <location>
            <begin position="294"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="354" mass="40389" checksum="DBF2A2A8520C422F" modified="2025-10-08" version="1">MINDEMQTTANNPQRKPNEKPEKLFIKNIPAESTKEQITLFCANFGEVLDCELRPSRKDNRFATAKVVYATADNVKFAMTQINSMKNEDINLEASIFIEPQSENLSENIVEISNMPENMSFNDVIRLFSTYGEIRGMNINNDNPSFRIGYVNYKNPESAKSAVSELKDFKTEDMTTPLQIRFARKKNFSPSTKTNFTNLNSRNILLTNIPMEWDEPMLSKLLSDCGTVIWAKMDLNLKLRKKAATATFEDPETARNAVQRLNGLSVDNKDRKLSARIVSETRAQDGRTVETGDSCKYFDRGYCYRGSNCWFAHENRENFDGKSAPRYRTRYLGGGVTEEVSSKGHAFFTTKNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APA7</accession>
    <name>A0ABV2APA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002741</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001124">
        <property type="protein sequence ID" value="MES1921172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="19206" checksum="7AA313F09DC13EB8" modified="2025-10-08" version="1">MSKNAFDIVSEGVFGDPVDILSILKSLFSPFDFEIDETTTEQILLFGGFERFSKNLIDTTYFEERAKDLLSAKGELWCTEIWKRNLKSTRKVWENIVIEYFQPFYESKKMSLLLFTFVLPDHHSVEDKLKLKLFYAVIILWLMGKNETWDSKYYFYSQIGLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB1</accession>
    <name>A0ABV2APB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003028</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001421">
        <property type="protein sequence ID" value="MES1921500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12490" checksum="31ADCCCCF5900AED" modified="2025-10-08" version="1">MWYDGKSSWKSFLRKIVRLARSQQLPEFDQRDHFFSLEGAASNDYMLLERDDNLSLSGILRCFEKSCESSVLDFTHRMNFQSASQNMGESLHHCVEWVLTLAIHAFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB2</accession>
    <name>A0ABV2APB2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">UMP-CMP kinase 3</fullName>
            <ecNumber evidence="5">2.7.4.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">UMK3</name>
        <name evidence="5" type="ORF">MHBO_003040</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the adenylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.14" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010001432">
        <property type="protein sequence ID" value="MES1921514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="NUCLEOTIDE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00406">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4 5" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10625" checksum="4C2601D44CABC861" modified="2025-10-08" version="1" fragment="single">MSIKLKKKAKIIFALGGPGTGKGTHCINISKKYGFVHLSAGDLLRKEIKENSENSRMINRIISEGKIVPVEVTVDLLLKQILKHQKNNKNLFLID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API0</accession>
    <name>A0ABV2API0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Exonuclease domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002908</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the REXO1/REXO3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001291">
        <property type="protein sequence ID" value="MES1921374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06145">
        <property type="entry name" value="REX1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034922">
        <property type="entry name" value="REX1-like_exo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047021">
        <property type="entry name" value="REXO1/3/4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Ribonucl_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12801:SF115">
        <property type="entry name" value="FI18136P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12801">
        <property type="entry name" value="RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="7">
        <location>
            <begin position="14"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="328" mass="36627" checksum="0EB8134FB51BFE07" modified="2025-10-08" version="1" fragment="single">LICRKLVKTAPGTHIVAMDCEMVLTNNGSELARCTVVDFEGNVVYDEFCKPDAPIVDYCTAFSGIDKKIMDKTSKRLGNVQNELAKVLTPATIICGHSLENDLLALRLVHEKVIDTSLLFAHPNGPPWKLALRVLAKKYLRRDIQQNELGHDSVEDARAVVDLIKLKFDKGYKFGNNPIDFESIFSLANRHGRDCSLVAGPMACKLFSNSLKQLSVYVCEDIENAVTSTEKILTKKEGFCWVSIDSFGKKDNRPASEMDEAIARIYEACKEHTLLIVLSGDLMNSGLKKMSKARAEWKSNNSSQWEKEETFENALKSAKQGIFLATMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ2</accession>
    <name>A0ABV2APJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002867</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001246">
        <property type="protein sequence ID" value="MES1921323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8714" checksum="E71BF8547AB6C1B2" modified="2025-10-08" version="1" fragment="single">DQYELRTNKISRVLCLLLSNDIRLNSEPTVTYKCIAKENNTTSEKKLNGYDDSQWICDDITETVAYDMFMVDVLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL7</accession>
    <name>A0ABV2APL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003152</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001564">
        <property type="protein sequence ID" value="MES1921625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19526" checksum="37BA9E194D9AAB37" modified="2025-10-08" version="1" fragment="single">IVRDIKNNKNFIVQPYENPNVAVSREFIKCSNSTITVLDENIHGMIFDDCEKIKIDCEKDYRVLTVEDCNDCEFTGGDRCLIGQFENGKNLKIRINGKHNSVFFTKNATNVTLIVEGTDIVYNLNENEPYRENENHSKKLVHHMVVFNSLKQTFQTFIFRVEVQSETR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM8</accession>
    <name>A0ABV2APM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003147</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001560">
        <property type="protein sequence ID" value="MES1921620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16912" checksum="403785B304397AA9" modified="2025-10-08" version="1">MQNFKSIEKTDLIRSIVTTCFFEKHSKPNILEKSAKVLESLKRIYFNRFTNKSIRNLVVQFSFCLFSSVLSNQNLVDIFEDALSEQNNPQFLFSFLKGLNSVFSVDETAIDFDNENEELNDCLRIETMEDQTFNFLSHFCKVFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN7</accession>
    <name>A0ABV2APN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rapamycin-insensitive companion of mTOR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002902</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001284">
        <property type="protein sequence ID" value="MES1921368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028268">
        <property type="entry name" value="Pianissimo_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029452">
        <property type="entry name" value="RICTOR_V"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13298">
        <property type="entry name" value="CYTOSOLIC REGULATOR PIANISSIMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13298:SF11">
        <property type="entry name" value="RAPAMYCIN-INSENSITIVE COMPANION OF MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14668">
        <property type="entry name" value="RICTOR_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01310">
        <property type="entry name" value="RICTOR_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rapamycin-insensitive companion of mTOR" evidence="1">
        <location>
            <begin position="127"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="326" mass="38134" checksum="DA26406378AA8AAC" modified="2025-10-08" version="1">MLDQISPKKNFIETPEAIFIFEIFSKESIHHKEQTLKMEKIYLSTIFFKIKLPDSHISIDKKSLPIPPHLYYSLCRTPLGFRFLVNKGEIERFSETVKKFCLLENNVKNEEDNKNGKFDFYFYREKILKIVSDLWTIGNICRTEEGFAEFKKNGILEQISRLAKNSQELSIKSCCVSVLGMIASADKMYFGKLGWSFPFNDKIQVVIPANIEEFFDLKNTEKTFKNGEKIENLSKSLNDLISELNKEETKIFFQISKFSSTNNTLKVLTNFKQYHSKNKDIFKSVKLFAAVTKLLNLNKFDLILRRSILFDFFKEVSLNSDFFKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP3</accession>
    <name>A0ABV2APP3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003160</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001571">
        <property type="protein sequence ID" value="MES1921633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12241">
        <property type="entry name" value="RRM_SF3B14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051847">
        <property type="entry name" value="RNA_proc/Spliceosome_comp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034150">
        <property type="entry name" value="SF3B6_RRM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45880">
        <property type="entry name" value="RNA-BINDING MOTIF PROTEIN, X-LINKED 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45880:SF1">
        <property type="entry name" value="RNA-BINDING MOTIF PROTEIN, X-LINKED 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="4" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="8">
        <location>
            <begin position="9"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="86"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13444" checksum="4908525BEA5E7F61" modified="2025-10-08" version="1">MKIPPEVNRILYAKNLPFKVTGQELYSIFGKYGAIRQIRMGSTNESRGTAYVVYEDLFDAKSALEALQGYSIQGRYLVLVYFKKERLEKSEALKKQREAINELKRQYGLKEGKGSEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ25</accession>
    <name>A0ABV2AQ25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003299</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001743">
        <property type="protein sequence ID" value="MES1921768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15902" checksum="B9822D8DF20D891D" modified="2025-10-08" version="1">MYNHWYGKNEYVFPRFGHLNDDRTRRNLLRNIFYGGAVAAIVSFVYKSPPSRILKSTAVFGMLNAMYSTRGLYCSRKWLTDEKMGNDREIIDYLLEEAKHSKSPIIDKKRVWFKRIMDNDRKSPVEIRKEKSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ34</accession>
    <name>A0ABV2AQ34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA excision repair protein ERCC-6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ERCC6_1</name>
        <name evidence="4" type="ORF">MHBO_003300</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001745">
        <property type="protein sequence ID" value="MES1921769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050496">
        <property type="entry name" value="SNF2_RAD54_helicase_repair"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629:SF7">
        <property type="entry name" value="DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45629">
        <property type="entry name" value="SNF2/RAD54 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="103"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="279"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="288"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="350" mass="41468" checksum="06730BD27070E205" modified="2025-10-08" version="1" fragment="single">NAFELAVHLKELINPYILRRHKNEVKRQFKLKNKKEKVLLCELTKYQKQNYIFVLKEFPIFRMKRRRGLMYKAIDKLRKICNHVDLYLHDNSVSKNSKSCKLNIMNKIISIWKEENHRVLIFSQTIQMLNIIEEELKTFSYFRLDGSTPICARQKMINRFNEDESIFCFLLTTRTGGLGLNLIGADRVLLFDPDWNPSIDNQAVERSFRIGQKKEVVVYRLITKGTIEEKVYHRQIYKQLLSNRILEDARQNGKQLFSKHNLANLFDFCDDDEDLNNHKLPNFLDNNKNGDKNLSKNEKNYDKNGDKNLSKNEKNYDKNGDKNLSKNEKNYDKNGDKNLSKNEKNYDKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ45</accession>
    <name>A0ABV2AQ45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003059</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001452">
        <property type="protein sequence ID" value="MES1921533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002259">
        <property type="entry name" value="Eqnu_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOSIDE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332:SF10">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="75"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="104"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="228"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="262"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="298"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="335"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="368"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="396" mass="45261" checksum="30610398701A06C0" modified="2025-10-08" version="1">MASKKAKVDPYIKFCIAFTGFQIITTYTIAMSVADVWIELFSVDMYTTFNYVGSIPMLALALFIPYVLKFFSVSTIFYSNVIIQIVSDAFFISVPTIVKYNKNVGLAVTFIFLLIASSCFAVTQTAIYSFAAEFSNQTVQFYVTGLAFPNMIFGLYFLPFPYYVKNLQFRMLCYCALPLVVHIASAFIFHATTKRIPKKEEMNEIEVEYTEEKLSFRESFLSVVRKKWVFLLLNFMIYFLGLLVYPSFMLQAKSSNPSLRDFWPKILIFLFGISEVTARIINTMKIKFIANAITEKNLWIFCFVPYTSSVLLFLSFLALRNVFYWPPLLIDIINGVFYSLLSFSVGIVNNNIAVFVHSRLKTRREVQAAGSLFNLANIVAIVLGLLVSHFISKSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ63</accession>
    <name>A0ABV2AQ63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003339</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001795">
        <property type="protein sequence ID" value="MES1921805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6130" checksum="C253CCD471BA0F65" modified="2025-10-08" version="1">MVLDLMCEDLVRGRIDSISRTLQMAWIKPIVGGNSELTRLRSGIEKWAIKSTIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQC4</accession>
    <name>A0ABV2AQC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003186</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001592">
        <property type="protein sequence ID" value="MES1921656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55277">
        <property type="entry name" value="GYF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="245"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="405"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="405" mass="48561" checksum="CD225B8099D8E8B7" modified="2025-10-08" version="1" fragment="single">MDDSENTNQEQIKRHFYSSKELLQLFKSRTSENDFKITSECEILTDHINEPIHLYFENLNKPFEKELFVIPFRIKKHFRGQSRYERRSGRLKHYQIRKWWYVDSDGKEEGPHSSEAMKLLYKQLVFDSSVKVKNYSKMYFVELRKMVENKWSTFLGQQITLKDLNEHDKNFKKYRKFKNPKEKSVETENFNKFENLAKTQKSPEISIETEEISDISINSIDKNEKSETDEKRTVFEENIDGRQEFANKEETNKVENENLDQKTENLNENYEKLNLENKNNLDSKNTAEGYHNDQNYLLSPNFYINSEIAKIYTENQQNLRTLQNAQNQQNYQQNFQTMQNMENYQQNINDPMGYSTFYASLQQENFPNNEISKNKNNVKKDKKIKLPKNMQKWCNITVKEITGKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG5</accession>
    <name>A0ABV2AQG5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003321</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001764">
        <property type="protein sequence ID" value="MES1921789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="261" mass="29941" checksum="B738548A0EEB22EB" modified="2025-10-08" version="1" fragment="single">RNRWGFKCFIKGVSIHSTPFLIDLSISLSSISKNISKSLIKTPNLLNEEIFLKPWFQTLLSCGLTTKISNFDNFSADFIAGKHTALPLLTIFDQVEHKWLLGTGRDRVKRSRLWVCSIRAMVLAMLKHVGSLKAALKICNPAVAAKNVRKSLLLKIKMCVLSAKKLQMWMYGRAQALKTWDNLWHNEIAREKTNRDKLCEEFYKEYSQNSGNETIELLCQLKNVQYIAKNPLLSIEGLFKVLLNELGKPRKDSLDQVFKRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP1</accession>
    <name>A0ABV2AQP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003399</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001869">
        <property type="protein sequence ID" value="MES1921864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026051">
        <property type="entry name" value="ALG1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13036">
        <property type="entry name" value="BETA1,4 MANNOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13036:SF0">
        <property type="entry name" value="CHITOBIOSYLDIPHOSPHODOLICHOL BETA-MANNOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14432" checksum="9C105469EF0D9C50" modified="2025-10-08" version="1">MAKELKKRKIMNIKTLYDFSNSEHCKSTAIETFKLLRKIAGENEKVAAMFEVKKDKNILTSKSSILNEYYFRKNRPFLIISSTSWTPDEDFSILLNCIKILDKMCQKKYIFVISGFLINKSQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ2</accession>
    <name>A0ABV2AQQ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003529</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002073">
        <property type="protein sequence ID" value="MES1922007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019183">
        <property type="entry name" value="NAA25_NatB_aux_su"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09797">
        <property type="entry name" value="NatB_MDM20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="378" mass="43622" checksum="3E8646EABCDC39A9" modified="2025-10-08" version="1" fragment="single">AKQNLENKSAENKLILAILNYFKAFGDKRFFFSDILPFLSILKDVGNFEKKFEFGESGFGEKGEWISLINREKLRRYFSVNETDENIKKAAETNLARFTDSRKVLETSDGDMNGAEDFFVFAALDLIRIHNGEPNFQEKTLLILKAIFIAEKALKESPNRKMEMALNMLYLTDNVAHPNFEKQILPKLNNILIENLSHFVSSKMEDFGCFEQLKNLASSSKLFYENSFKSGSNSLLRFIKQGKPIMAIETLIFNLKLTKSLTKSKLNFKAFKVKIMEDLNRTTDFALEKIQNSLKQHKQTLSLFNAHGHFFENSDFSYFEEFSYRNEKNFLEAKSKYSKISRAIGNTKYNLRLKDVSKTFYPSSAASADIFRAFGVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR01</accession>
    <name>A0ABV2AR01_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribosomal protein S5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPS5_2</name>
        <name evidence="5" type="ORF">MHBO_003602</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002193">
        <property type="protein sequence ID" value="MES1922084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.455.10">
        <property type="entry name" value="Ribosomal protein S7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000235">
        <property type="entry name" value="Ribosomal_uS7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023798">
        <property type="entry name" value="Ribosomal_uS7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036823">
        <property type="entry name" value="Ribosomal_uS7_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11205">
        <property type="entry name" value="RIBOSOMAL PROTEIN S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00177">
        <property type="entry name" value="Ribosomal_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47973">
        <property type="entry name" value="Ribosomal protein S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS7" evidence="4">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="7719" checksum="1ED1D14F4CF7E87D" modified="2025-10-08" version="1">MAMKILQRAFEIINTLTGRNPIQVLVEAIVNAGPREDSNRVGSSGVARRQAVDVSPLRRVNLSIAYITTAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR53</accession>
    <name>A0ABV2AR53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003666</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002285">
        <property type="protein sequence ID" value="MES1922150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14895" checksum="354AEACC01A5E095" modified="2025-10-08" version="1">MFVLQKFLNQHITKRHAEAAKTFLSKEEQNDFFQNFMNDKDHFQLEKVESLIPGDTSSRYSRNENSRHRNSRNGFNGRRGSRFNSRRGVRFKRRSYVDFDKPPCEEEVHNDYGFSSEAKFLFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARF1</accession>
    <name>A0ABV2ARF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003753</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the major facilitator superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002460">
        <property type="protein sequence ID" value="MES1922246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328:SF28">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13347">
        <property type="entry name" value="MFS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="41"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="162"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="199"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="229"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="252"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="295"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="325"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="343" mass="39437" checksum="6E267149BEC4907A" modified="2025-10-08" version="1" fragment="single">MSDCIQKKYRRVIFIFIASFVLPLAYFSFFLKMHFSSNSSKMIYCITVLIFLNLGKSLVKVPHSAMASELANDGNINKYIACRSFFSSFGSLLSTGIAIWVTTDDSDNESEKLTITGFYSAFFLFFCFYIFLILTRIPEVKKKNNENLRKCRISDIVTSYRHCYFIAISTMNFLFQICNQLVISNLKQYLEYYVHRKSWLIWSLVIMTSSNLFYSFFCDKTEKKLGTKNMLVLSMLLSILSFALFLCANISIVIILIAACFLRGISLSTSTFCLRKMLRFLINRDKRDGIDRKAIYIGNNGFISRIGSGVATLIISKYIKSSSEYFMSRSILVVMVYIPVVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV3</accession>
    <name>A0ABV2ARV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase M13 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003918</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002737">
        <property type="protein sequence ID" value="MES1922405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1380.10">
        <property type="entry name" value="Neutral endopeptidase , domain2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042089">
        <property type="entry name" value="Peptidase_M13_dom_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008753">
        <property type="entry name" value="Peptidase_M13_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05649">
        <property type="entry name" value="Peptidase_M13_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55486">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M13 N-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="312" mass="35553" checksum="F0379983F76B2255" modified="2025-10-08" version="1" fragment="single">TASDKTKLMYQTCLKATKNSNNSEGLLKLSSSISETLKSVNTKNSDDPICAKKSVCKHFSKALADLHLRSEKTLFSSRILDFVRTGKYKQEKVLSLMQPKFVGGYRQSEKTKNCHLEEDEIDFDDIVYDDKDDHDKKSFSRFHRIAELTQKRVSNSDLKKLVKFEKSLDKYRVDPNDIGKNMKMLEGNSKFYSVAKLNSHFGKILDFNNYLKQLFGKKSSDFDGKNVMVICPTYFSALNKILAEESGRIVKLYAKMSAFVSFNSKFPAVLSKKDQKLFGLKNLFDCAYLTEAALPHSANKMFLNGIELDNKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW6</accession>
    <name>A0ABV2ARW6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003901</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002715">
        <property type="protein sequence ID" value="MES1922392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034732">
        <property type="entry name" value="EPHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050701">
        <property type="entry name" value="Histone_Mod_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793:SF107">
        <property type="entry name" value="BROMODOMAIN-CONTAINING PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793">
        <property type="entry name" value="PHD FINGER PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13831">
        <property type="entry name" value="PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13832">
        <property type="entry name" value="zf-HC5HC2H_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51805">
        <property type="entry name" value="EPHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="4">
        <location>
            <begin position="171"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="343" mass="38740" checksum="F343CA8AF68A5424" modified="2025-10-08" version="1" fragment="single">KKCHLCENNSKHKNLLKCNYNETECARFFHLSCALESKQFHWISFRNNLSNSAKIEFAEPILRCALHSDRKVIAESMPRPILKGDSFPSNLDIFDLTANNFVFDQLTNSGNKLNSETRCSVCYSPVHFDRDFFVFCSNPFCEIAVHQRCYGVSDEANDWFCDVCVAGEKSSAQCGRCSFKGGALKISQNGDWIHVACALLDGSVKIGNLFFMAEILPRNESEKNNKKKIENGAGKCFQCAGMDGKLISCSQKDCGKVFHALCALKNSVYCGFEFETKLPKRHLETALDQYCVTPLIGQKSSKNGFVYCSEHSPENFDCDQKWHFLPSLSSDTFSQSPIKRFFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS57</accession>
    <name>A0ABV2AS57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Low-affinity phosphate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PHO91</name>
        <name evidence="2" type="ORF">MHBO_004022</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002980">
        <property type="protein sequence ID" value="MES1922505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14447">
        <property type="entry name" value="SPX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004331">
        <property type="entry name" value="SPX_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031142">
        <property type="entry name" value="SPX_prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45978">
        <property type="entry name" value="SPX DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45978:SF7">
        <property type="entry name" value="SPX DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03105">
        <property type="entry name" value="SPX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51382">
        <property type="entry name" value="SPX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SPX" evidence="1">
        <location>
            <begin position="1"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="253" mass="30089" checksum="15DAB656ED883356" modified="2025-10-08" version="1">MKFGKTIKQEIEYMETWSDKFMSYLELKKQIKNVKNSLEHSRRSQSASNFSETRFDYGSGEKERFFRRIRADIHTVDHFYRKNLSLLRGSLNEIKLELEQETKKESISENDIKAVDRKFLHKSNIKSRLESVYELLAVLQHYCEINATGFRKIVKKWDKVTSERNLSSFMSQILDKTRFKAHFELVCALAEIEALYSRLFMDNDIEATRKHLALLKVNVRLANGKEQSVFRLIRMLIRMFRDGIGDMRRRKSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS77</accession>
    <name>A0ABV2AS77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003917</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002735">
        <property type="protein sequence ID" value="MES1922404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="40"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8379" checksum="14386055DFCD5923" modified="2025-10-08" version="1">MIDSYFTEGARYKPTVTAGNEDSLLPEITRKRRYHKVRLSSPESQVNAHMGNHSIPNQIKKQTTYDGRGSWLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB7</accession>
    <name>A0ABV2ASB7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">N-acetylglucosaminylphosphatidylinositol deacetylase</fullName>
            <ecNumber evidence="2">3.5.1.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003979</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PIGL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.89" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010002883">
        <property type="protein sequence ID" value="MES1922464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10320">
        <property type="entry name" value="LmbE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003737">
        <property type="entry name" value="GlcNAc_PI_deacetylase-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024078">
        <property type="entry name" value="LmbE-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12993:SF11">
        <property type="entry name" value="N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12993">
        <property type="entry name" value="N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02585">
        <property type="entry name" value="PIG-L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102588">
        <property type="entry name" value="LmbE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18220" checksum="64182AA6B0814FC4" modified="2025-10-08" version="1">MFFLPTIKSLNPKLKIHLLCLSKGGKDGVRTNELVSSAEFLGISKLKISETNYFVDGLKEKWPHSKIRKTVEDYITKNGIKNVITFDENGVSNHPNHIDIFKAISKSDFFVENKVSLFKLKTVNSLQKYIFFIEFPFTILSKLWNFDEDNFTLFYKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ3</accession>
    <name>A0ABV2ASJ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FATC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003969</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002860">
        <property type="protein sequence ID" value="MES1922454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003152">
        <property type="entry name" value="FATC_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02260">
        <property type="entry name" value="FATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01343">
        <property type="entry name" value="FATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51190">
        <property type="entry name" value="FATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FATC" evidence="1">
        <location>
            <begin position="199"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="27024" checksum="5DE8B4E180E503A8" modified="2025-10-08" version="1" fragment="single">CQFLSSIFIVTTKKQKEIEEINLADLKKLLQTSSILKIVGDISKLLSEFLKIAKDSNIFPSFKKYIFDEDFSFISYINSIKKNLKIFVTNAEKIAHLNSENYSFGKKEKKSITKFFSSAKNVIKINANFSTETILFVEKLKKLNSVDSSEQDCISNVFFGDNRNFEQKVKTSFRLEKKMERIYASYIMKRVERKLNFNGERNVNDFVDKLVKMASDEKRLSLMYEGWMPWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASJ7</accession>
    <name>A0ABV2ASJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004164</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003317">
        <property type="protein sequence ID" value="MES1922645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7628" checksum="B72E4FD8EF13AEE5" modified="2025-10-08" version="1">MRELKFNHLSLKKHEQNAMRKQLFTDTRLFWFTILQFAAIILLGLFQLALISSWFSISAIRSSGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK1</accession>
    <name>A0ABV2ASK1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Adenylate cyclase-associated CAP C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004172</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003340">
        <property type="protein sequence ID" value="MES1922655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013912">
        <property type="entry name" value="Adenylate_cyclase-assoc_CAP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016098">
        <property type="entry name" value="CAP/MinC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036223">
        <property type="entry name" value="CAP_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08603">
        <property type="entry name" value="CAP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69340">
        <property type="entry name" value="C-terminal domain of adenylylcyclase associated protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Adenylate cyclase-associated CAP C-terminal" evidence="1">
        <location>
            <begin position="12"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="15334" checksum="080C13CF4238C0E8" modified="2025-10-08" version="1">MPTVIADKAKEMLEKSAKPDEEITVEKCNGTTVVFAGGFRKLCIKNSTGVTAAVDSLDALCIENNKDLKVLVKGASKSVCACNCSKVVLQVQEPEGMKVTHCACEEFNLLLPEGDDLKEHSMPSTITTCLTDKGLKHSVSETT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM5</accession>
    <name>A0ABV2ASM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Letm1 and EF-hand domain-containing protein 1, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">LETM1</name>
        <name evidence="9" type="ORF">MHBO_004207</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003419">
        <property type="protein sequence ID" value="MES1922685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033122">
        <property type="entry name" value="LETM1-like_RBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044202">
        <property type="entry name" value="LETM1/MDM38-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14009">
        <property type="entry name" value="LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14009:SF1">
        <property type="entry name" value="MITOCHONDRIAL PROTON_CALCIUM EXCHANGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07766">
        <property type="entry name" value="LETM1_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51758">
        <property type="entry name" value="LETM1_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="3" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Letm1 RBD" evidence="8">
        <location>
            <begin position="1"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="25701" checksum="6D921E864D265C16" modified="2025-10-08" version="1" fragment="single">MAEFLQKRLKEKAEKIQSQQGIDVPADFLVTLKRVHDGKHVSEDQLKRTSNLFKNEIALDHSRETLNRICGYMGMRATGSTEWLRNHMKSQFKELKQDDYKIAERGIEKMTTREMSEECCERGMAVYKLNRTDLHKYLSRWIYFSVHRDVPIPVLIYASCFTPAERIDSVAEAVKNSDETNVEKIEMISGIEDKSIKRVVETKRTEDLYKSDFVAEKEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW6</accession>
    <name>A0ABV2ASW6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DZIP3-like HEPN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004277</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003599">
        <property type="protein sequence ID" value="MES1922755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041249">
        <property type="entry name" value="HEPN_DZIP3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18738">
        <property type="entry name" value="HEPN_DZIP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DZIP3-like HEPN" evidence="1">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13299" checksum="4FB5BE84FFCE62F2" modified="2025-10-08" version="1">MTLLYSLIRNICTRFNPTSFWTVLPPDACVQVGDDIERIRISRNDVFAHTAIKELEDQIYKKYHRIARKICKRLKQYSQGRDYEEELQQIHESQIEDVKGVGEKIEKLAGKCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC3</accession>
    <name>A0ABV2ATC3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PPPDE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004366</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DeSI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003852">
        <property type="protein sequence ID" value="MES1922839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1720.30">
        <property type="entry name" value="PPPDE domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008580">
        <property type="entry name" value="PPPDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042266">
        <property type="entry name" value="PPPDE_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378">
        <property type="entry name" value="DESUMOYLATING ISOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378:SF7">
        <property type="entry name" value="DESUMOYLATING ISOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05903">
        <property type="entry name" value="Peptidase_C97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01179">
        <property type="entry name" value="DUF862"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51858">
        <property type="entry name" value="PPPDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPPDE" evidence="4">
        <location>
            <begin position="4"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="20135" checksum="6EFD2C201A265518" modified="2025-10-08" version="1" fragment="single">MSKHQVYVYVYDLSNGLAKQMSPLFLGKTIEGVWHTAVVVYNREYFFGGLGISHCFPGQSMAGNPLQKLFHNWANSKNGIITLNKSMGETTKSEKEFEAHLTNVRPNYTSSKYDLLQHNCNNFTDEMCLFLVNKRIPAHITGLPAEVMSSPMGAVLRPILSSLQNNNSLNSGNIPFGGSNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE2</accession>
    <name>A0ABV2ATE2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PI3K/PI4K catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004230</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003480">
        <property type="protein sequence ID" value="MES1922706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00891">
        <property type="entry name" value="PI3Kc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1070.11">
        <property type="entry name" value="Phosphatidylinositol 3-/4-kinase, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1010.10">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015433">
        <property type="entry name" value="PI3/4_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000403">
        <property type="entry name" value="PI3/4_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036940">
        <property type="entry name" value="PI3/4_kinase_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018936">
        <property type="entry name" value="PI3/4_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035448">
        <property type="entry name" value="PI3Kc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10048:SF14">
        <property type="entry name" value="LD28067P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10048">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00454">
        <property type="entry name" value="PI3_PI4_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00146">
        <property type="entry name" value="PI3Kc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00915">
        <property type="entry name" value="PI3_4_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50290">
        <property type="entry name" value="PI3_4_KINASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PI3K/PI4K catalytic" evidence="3">
        <location>
            <begin position="1"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="32059" checksum="50331D4B58F97749" modified="2025-10-08" version="1" fragment="single">MDSKKKPLWLVFDEPQCPESQNITIFKIGDDLRQDILTLQLLKLMDQIWLADGIDLKLTPYEVISTGDQIGMIEVVTNAETVSKIQIKHGGLATGALKETTIANFLRENNEDIKDFKKAQDNFVRSCAGYCVATYALGIGDRHSSNIMVTKNGFLFHIDFGHFLGNFKTKMGVLRERSPFVFTNEMAFVMGGKKFQSHRLFNKFKELCNKAFVSLRKNHQLFVDMLRLVFIFKHLEKMVTSGIPELRSDKDIEYFTNMLMLDKGEKEATEELQRIIRET</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN9</accession>
    <name>A0ABV2ATN9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ubiquitin-specific protease</fullName>
            <ecNumber evidence="6">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UBP16</name>
        <name evidence="6" type="ORF">MHBO_004563</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010004408">
        <property type="protein sequence ID" value="MES1923029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01360">
        <property type="entry name" value="ZF_MYND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="5">
        <location>
            <begin position="96"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24607" checksum="C9FD238AEED30E9B" modified="2025-10-08" version="1" fragment="single">MMSRSLIQIFDVKSKQMLQYGKGYVEYSGNPDRLSSRFATKLVRWADHSYDPLNFSLQHGMDPDRHEMPFCNAYVELAFNWVDTIAPDAIRNTVTCAKCYKNDETKKQMVCKDCRLAFYCGRKCQILHWNEAHKAVCQKRDFKTESINNFEQEKTAFSSVIIELSDRMNGKRGIKKLIKMAENDFDGIEGVPEKEVAGKGDQEVNVLREEPVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP7</accession>
    <name>A0ABV2ATP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004521</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prefoldin subunit alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004257">
        <property type="protein sequence ID" value="MES1922989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016655">
        <property type="entry name" value="PFD3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009053">
        <property type="entry name" value="Prefoldin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004127">
        <property type="entry name" value="Prefoldin_subunit_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12409">
        <property type="entry name" value="PREFOLDIN SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12409:SF0">
        <property type="entry name" value="PREFOLDIN SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02996">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46579">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17357" checksum="BAA56877513DB241" modified="2025-10-08" version="1" fragment="single">KILPKNLLLKLTAYEKQYGSININFKKNLQMVQKSINECKASIESVKTLKSEKLKDIINLKMDVCLSNGIYSKASVDLNGVVCLKINEDVLVEYEYEEAILVLEDSLLKYKEKRRMIKKNLGVLMSQMALNRSNLQLLDKFLEKNPISDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ6</accession>
    <name>A0ABV2ATQ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetyl-CoA Carboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ACC2</name>
        <name evidence="4" type="ORF">MHBO_004283</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003610">
        <property type="protein sequence ID" value="MES1922762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06850">
        <property type="entry name" value="biotinyl_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049076">
        <property type="entry name" value="ACCA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049074">
        <property type="entry name" value="ACCA_BT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45728:SF3">
        <property type="entry name" value="ACETYL-COA CARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45728">
        <property type="entry name" value="ACETYL-COA CARBOXYLASE, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21385">
        <property type="entry name" value="ACCA_BT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="Single hybrid motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="3">
        <location>
            <begin position="150"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="25941" checksum="7C045BA5DB85D19E" modified="2025-10-08" version="1" fragment="single">MMKLSHNGHSKIEFEDRLDTSTIVVAGALFKAIEFFNKTVKEITRELKRGRYYLPPKKIKSLTTFQTSLITNDAKYLLRVFRMSKERFRVELMSETGGSEKDILWGANAEVKESSENGKLMSFNGRSHVVYGMDTGSGLTITINGRTRLFQKENDPSQIRATIPGKLMRYVAKDGERIEKNGIVAEIEVMKIVIPLLSAEEGVLETCLTEGSIISVGDIVAKLDFDHDKST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATX3</accession>
    <name>A0ABV2ATX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004618</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004575">
        <property type="protein sequence ID" value="MES1923079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16499" checksum="A955F3E05AD2D8E0" modified="2025-10-08" version="1" fragment="single">SSNLFEKTFSANNSSKKIQSSNLFEKTFSANNSSKKIQSSNLFEKTFSANNSSKKTQLSNFFENKNPNSLKPNKPNLADKREKLNHFFNNSASKQSLDIIDSAKLQKREKPNLEMIKKPLVKRYRVKIVKNIDDCFARKKIEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ4</accession>
    <name>A0ABV2ATZ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004396</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003928">
        <property type="protein sequence ID" value="MES1922868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5712" checksum="CF6D22CE09F38663" modified="2025-10-08" version="1">MRILAEYKGRCVISLKRTDSGKPWSPGLTVEVLHLVGRLTDECSRFRKHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU42</accession>
    <name>A0ABV2AU42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RecA recombinase Rhp51</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">rhp51</name>
        <name evidence="1" type="ORF">MHBO_004740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005061">
        <property type="protein sequence ID" value="MES1923195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.20">
        <property type="entry name" value="5' to 3' exonuclease, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010995">
        <property type="entry name" value="DNA_repair_Rad51/TF_NusA_a-hlx"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14520">
        <property type="entry name" value="HHH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47794">
        <property type="entry name" value="Rad51 N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9145" checksum="E897FDAE08567F8D" modified="2025-10-08" version="1">MEEKSKNVEINSTGTPIDSLEGVSGISSADVKKLKDGGYYTVESIAFETKRALVAIKGITEQKADKLTIEGFYENKDVFVVLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF0</accession>
    <name>A0ABV2AUF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004584</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004482">
        <property type="protein sequence ID" value="MES1923051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558">
        <property type="entry name" value="CELL DIVISION CYCLE 16,23,27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558:SF9">
        <property type="entry name" value="CELL DIVISION CYCLE PROTEIN 16 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0498">Mitosis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22551" checksum="A31FD02A3092EACE" modified="2025-10-08" version="1">MENQKTAVRWYIQALGYNIDCVEAFEKLVDNKMLTVSKEEFMVSKYLNFSRCPEWLKLFFETKLSIKQKSCPSKVLQPFQKSADFINCKAKVLLSQYKYNECADLLEKSIEEDVGLNSKTSRLYSIALYALKDNLRLFLFAHRLVENHPLKTVGWFSAGLYYLLIDKNEAAKKFFVFLCKAFQQKFSYKYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY5</accession>
    <name>A0ABV2AUY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cold shock domain-containing protein E1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CSDE1_3</name>
        <name evidence="7" type="ORF">MHBO_005057</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the UNR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006390">
        <property type="protein sequence ID" value="MES1923479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12913:SF1">
        <property type="entry name" value="COLD SHOCK DOMAIN-CONTAINING PROTEIN E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12913">
        <property type="entry name" value="UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="CSD" evidence="6">
        <location>
            <begin position="65"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00044751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="18521" checksum="DC988079EEA2FCA9" modified="2025-10-08" version="1" fragment="single">IFTLLKNKAKIDVKISYKQRNLVDPKIDIFEGDIVSFRKKFDLRFNGSVSAIQIVLIKPNESFKRSEGIVISLKRDFGFLTCLEYPDGLFFHFSSVVGDAKKSLSCNDEFSFEIKTDGNGKAIATRMIKLAKNTVQLDDIDSTPFIGKIINTGYSYKLDDDFLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV10</accession>
    <name>A0ABV2AV10_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glucokinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005072</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006457">
        <property type="protein sequence ID" value="MES1923496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.367.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003836">
        <property type="entry name" value="Glucokinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363:SF1">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02685">
        <property type="entry name" value="Glucokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="159"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="185" mass="20134" checksum="274580D40B5D4146" modified="2025-10-08" version="1" fragment="single">ALKLFIGCYGAEAGNMALSVLPTGGVYVAGGIAPQIRDIIKDEFMDSFLNKGRMRTLLAGYPVYIVTNPSIGILGARFMGRSTIDDKDKKLDRNLSFGDIKSMSSGINLLSETPKTYNIKEKPKNVRPWATSASERIFETASCEERSVRLVKNRTMENLLCVGAGICFSGLILAAFLLGKNSSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV16</accession>
    <name>A0ABV2AV16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005077</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006484">
        <property type="protein sequence ID" value="MES1923500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11550" checksum="88BF00D52288D9E6" modified="2025-10-08" version="1">MLNFIINDENSNFHRQLKIWNFQVNRTVYHVGKSTEAIISFVCRPGFRITKWGDLHLRTHVHVRSDGTLNFHEKMRECGFHPIFSESKKSFSIQFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV75</accession>
    <name>A0ABV2AV75_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005133</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006798">
        <property type="protein sequence ID" value="MES1923544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14492" checksum="B1738AAE6952D52B" modified="2025-10-08" version="1">MSISELFETGFIVNKIPNEIESNQTRKEESSNHREDYLFSNEDTQSDIILDPRHISGDSNEVMKRKARDGEKSEFQGKQMFLELVKSCLRSSLSLIRDVDDVENRRTERCEIILSYLCKGKMKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC2</accession>
    <name>A0ABV2AEC2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glutamine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_000069</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>tRNA(Gln) + L-glutamine + ATP = L-glutaminyl-tRNA(Gln) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:20121"/>
            <dbReference type="Rhea" id="RHEA-COMP:9662"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.18"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.18" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000008">
        <property type="protein sequence ID" value="MES1918042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.1290">
        <property type="entry name" value="Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="entry name" value="Ribosomal Protein L25, Chain P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004514">
        <property type="entry name" value="Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007639">
        <property type="entry name" value="Gln-tRNA-synth_Ib_RNA-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042558">
        <property type="entry name" value="Gln-tRNA-synth_Ib_RNA-bd_N_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042559">
        <property type="entry name" value="Gln-tRNA-synth_Ib_RNA-bd_N_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050132">
        <property type="entry name" value="Gln/Glu-tRNA_Ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000924">
        <property type="entry name" value="Glu/Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020059">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_codon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_bL25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_bL25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00440">
        <property type="entry name" value="glnS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097:SF4">
        <property type="entry name" value="GLUTAMINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43097">
        <property type="entry name" value="GLUTAMINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03950">
        <property type="entry name" value="tRNA-synt_1c_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04558">
        <property type="entry name" value="tRNA_synt_1c_R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00987">
        <property type="entry name" value="TRNASYNTHGLU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="Ribosomal protein L25-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaminyl-tRNA synthetase class Ib non-specific RNA-binding" evidence="12">
        <location>
            <begin position="6"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic" evidence="10">
        <location>
            <begin position="241"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="domain" description="Glutamyl/glutaminyl-tRNA synthetase class Ib anti-codon binding" evidence="11">
        <location>
            <begin position="552"/>
            <end position="610"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="614" mass="71454" checksum="40539407C00D5908" modified="2025-10-08" version="1">MTNSKSLFDLLSLDKEIRTCLDKNKKVAERMEKLLTESKYLRSGSKIPEDQSKLLYTFAKKGYKSDSAEIHSFVVRDLIIDQKITSQEQLDAAEKYFSKNSKIDFDDFEKNCGIGVTITDDEIRYCVREILEENIELLKNQKWDIYPKLRSGLMKNLRNKLPWADGKKRLEIFNSEVEAIIGPKPKISVKKKSPSKINSEEEQVKGAIGLDKYLKGRKMSIVYNTKEIYAEHVERTKGVFHSRFPPEPNGYLHIGHAKAINFDFSLAKAKNGECILRFDDTNPLAEDIDYIENIIDNVKWLGFEPSRVTYSSDYFDELFAFAVKMIKDGNAYVCHQPQEEIKRSRDLRIKTGKPQPSPFRDRPVKESLRLFYEMRDGKFEPGEATLRMKGDLEHPNPNMWDHIAYRIIDATHPHVGNKWRVYPSYDFTHCIVDSLEDIDASCCTLEFENRRESYFWLLDKLGLFKPVVWEFSRLNMDHNVMSKRMLSELVDRKIVRGWDDPRLLTINGIRRKGVPAEAINNFCEKIGVTRAQNSISSTYLDVFTINVLDSICKRNMAVLDPLKIIITDFDQNETKTDLCPLYPNIKNNEEKYVVTMRKTLFIEKTDFKLKDEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER7</accession>
    <name>A0ABV2AER7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the actin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00022">
        <property type="entry name" value="Actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00190">
        <property type="entry name" value="ACTIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00268">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="393" mass="43991" checksum="C774EFE382AFC517" modified="2025-10-08" version="1">MEYYGEEIGTIVVDVGRTHFKAGFAGDSSPSSFNVSAAGISNIKSEKFAGKNLDYVLSEKEIDKLQIVKPFYDLKNANFDAIEAIFNEALLEDLQIKPKEHPILVSERTDTPKIYREKLAQLLFEKMGFECLFFAKQPVLSCFASGRYTGMVLDVSGADTKCVPVSDGYSLPAETKTSEIGGDWIDTFLKTRLLARGINLIEDKILLSADKSVVDYVESRTLRDIKENFCFVKSEENGPVRSDSKDYKLPDGRLVEIKGEDRYIPTEVFFQPQSDLFEKRLNNVKSAPKLLVETLLECDADLRKNLVGNIIVSGKGLLFKGFYKRLFSSVNQMLPPALNKLKIIMPSDNIRRNFEVAWIGGSILGSIAAFKQLIVTKSEFEESGTSIIHEKCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AES3</accession>
    <name>A0ABV2AES3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">GTP-binding protein sar1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000019</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the small GTPase superfamily. SAR1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000003">
        <property type="protein sequence ID" value="MES1917984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006689">
        <property type="entry name" value="Small_GTPase_ARF/SAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006687">
        <property type="entry name" value="Small_GTPase_SAR1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45684">
        <property type="entry name" value="RE74312P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00025">
        <property type="entry name" value="Arf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00328">
        <property type="entry name" value="SAR1GTPBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00178">
        <property type="entry name" value="SAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51422">
        <property type="entry name" value="SAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 11" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="9 11" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 11" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1917984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="196" mass="22115" checksum="7419A0C612AD27B5" modified="2025-10-08" version="1">MIFLDWFNSILTWAGFRKDSKIVFLGLDNAGKTTLLSVLKVFIQIFKDGNVKAAAPTGHPQKDEIQIAGVNFIAFDLGGHKSMREIWESYCADISGIIYLVDAADQERFEESKQELQRILTLESLNNVPVCILGNKVDNPYAASEETLKDVLDLRMCLTGKNAPKTKDIRPVELFMCSVVKRFGYDKGFKWIVKNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEV2</accession>
    <name>A0ABV2AEV2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000217</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000028">
        <property type="protein sequence ID" value="MES1918213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001660">
        <property type="entry name" value="SAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00536">
        <property type="entry name" value="SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47769">
        <property type="entry name" value="SAM/Pointed domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="SAM" evidence="2">
        <location>
            <begin position="17"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="388" mass="46295" checksum="CF1073B4B415269F" modified="2025-10-08" version="1">MLKKIFRKKNFNTFIFDNKLTPYMNKFKSENIKSMEILNYLTDEHYKKMGMSLGDKAKIRGKFGNFKLAKNYKPIIFRKKSKNSLKKYLQKLGLEEHYEMFLSRNYKTLYHLSKNTEKISSDFPDLKIGDYIKIVTNLRSKNNKNFLTAKQILSKNICQDSLTGKSPFEQQKQKTKIYGILALTSFLLSITFISFYCLNKFCKIFDNKKMKNDENFIEFQNLFDFDEFENLETKLKNFDDFMKINDFVNLIENNKIWENAKFCYVVAKSPIKIRQKTDSEKSIFTKKDEAIFILLSLTKIPIDKKLLFALNFKRNFDKNGLMEVLERIIRFGWLHNQKLAIFAEKKNIEKIYRLLMDKNLILIDNEKSIYNFNEDKLDQIVNLFLKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF28</accession>
    <name>A0ABV2AF28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000037">
        <property type="protein sequence ID" value="MES1918288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046710840" evidence="1">
        <location>
            <begin position="23"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22001" checksum="8F42654C96311E24" modified="2025-10-08" version="1">MGNLIKFCLFLVTINCLCDISSIITDGTETSGRDMNLSINVHKIAEDRQVLILCLDPSMNFVISDDNDELMYFKGEVLIKCVDEQIFFVDFLERNDRKIKNVKCVNDLEPFIGKQEIKDQCVSKAIESRIVLSSSLETDLFYNSGLRLTGRCWLDNQTLPKYIQIKCQNGRYIYSGERGLIDNVFRYCTCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF29</accession>
    <name>A0ABV2AF29_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000003">
        <property type="protein sequence ID" value="MES1917978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964:SF113">
        <property type="entry name" value="USPA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="54"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1917978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23363" checksum="BE8FD4E6D8539521" modified="2025-10-08" version="1" fragment="single">HKSLSEPNLLKKIDVMMEPSTSKSIAQKSLSDTEQIFESSFVSETDITEPTFSYRNILLAIDHTNMAHRIVNFTIDELVDKTYNSRDIVHLLTVVNYDIEIELSGQDVLGSIKRLREKQVLKTKYRMGTFERICEQNNLAYATHIIASLSKAQIGEKIVSKAKELKCKLIVLGKTHLKFAKKLIHRSVSKHCIEKSPIPVIVIRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF89</accession>
    <name>A0ABV2AF89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000337</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PIGU family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000048">
        <property type="protein sequence ID" value="MES1918360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009600">
        <property type="entry name" value="PIG-U"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13121">
        <property type="entry name" value="GPI TRANSAMIDASE COMPONENT PIG-U"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13121:SF0">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL GLYCAN ANCHOR BIOSYNTHESIS CLASS U PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06728">
        <property type="entry name" value="PIG-U"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="4" id="KW-0337">GPI-anchor biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="95"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="138"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="182"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="219"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="37579" checksum="21B81179C6DA3357" modified="2025-10-08" version="1">MKRVYFKILLLTLLTRFTVFILFASRKNSPSNNSIAFSIGFEQRHNNFENMFEAFFHVKNGKSPFSGNVFHGNPLLLYFLLLLKINKLSYFKSKFALHLLTSICDFIAAINLMEIVNFVETKDAAKSPKTKEKSTFSILIAILYVSNPFAIFNSIISFSTINYCLLFVTVKNALKRRTLSSCLFFSLLIFTEIYALLFFPLLIAIFYKKEETIFNKVSKIALLTLLVAFFVGTPIYLLSKEKGTNFLKESYLFLLSVFFKILECKFESKFRNVLVFVCPDVGKVSKNIFDHLQHAIDFCFNSNFDRFLARALFLIRHFNVCANNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB5</accession>
    <name>A0ABV2AFB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000311</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000043">
        <property type="protein sequence ID" value="MES1918332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF458">
        <property type="entry name" value="SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="125"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="166"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="208"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="234"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="282"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="9">
        <location>
            <begin position="27"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="356" mass="39998" checksum="022A76ACE9CB7900" modified="2025-10-08" version="1">MQKLYTLYINKNPVEATWAPIGITIGLFMIFVVPFSYQKDMSSLSWLSMLSIATFGVIFVFVFAIGVKTPNTPSNYAPLDGTKFISAFGTLSFAFVCTDSIFPVYQNLKNRTPGRWDKVVHITMLSLGLLYASFAITCYFLIPFLGDYVLNSESITNLMETNIAKILLAITLLLTYLSNIHVSRTYIYAVIERAIKPLSEISNKNFKILHGCVTTMLIVVTILLGIYLNDLLFIVNMTGLISSTAVGFIIPTMIIFKVKTMKKVSGDFKNAFTGSLSFRKRLLYILHFLFPIFIFIFGLIGFAAGAPLEIINFVEEQYLMTTTAKTRKMAKRILSRNNLFFFSVLSSFLSFATSIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE4</accession>
    <name>A0ABV2AFE4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000001</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1917962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13664" checksum="A7C789E8180DCE6E" modified="2025-10-08" version="1">MAEETKDIEKSLSEKIKPIDLRGKPEIEKKYTDYLKSGTLYALFLIWYYSLGIGMSVAMYVAVKSTKNVGLVIMFAVFCLFIFFVVFFIVHGMLYSKPKELKIVVELSEEELVEKSLAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFN4</accession>
    <name>A0ABV2AFN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000459</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000071">
        <property type="protein sequence ID" value="MES1918495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14403" checksum="D52225FE742EB965" modified="2025-10-08" version="1">MQQHDRTFSKTAFPNFIKTVQKSQNKQYFIKHSVHPSNPSSDPQNKPQIFSFGAKNFCSSLSNTRFCQKTSRTQKHCAIRRQNLFPEHRRKQQRIDESVLCGAVDDIGRQNFQVELSSGTNGDID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG16</accession>
    <name>A0ABV2AG16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000091">
        <property type="protein sequence ID" value="MES1918601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19233" checksum="C35FF8F41AE1FAB8" modified="2025-10-08" version="1">MTTKMKNMVKSTKNISITVNKPVKLKIGKTRFVMAGTKKTKSKYASVNDFDHLVDKPVQIMNYIKSTPSTSTKTILQPFSSVGEKYEKELKIAQKPLMSTLILMSTDSFDYFNRKREKMADYKLISDYSISMTIILLCVYSAYSMFFQYREKLENKAALGEIEEEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG17</accession>
    <name>A0ABV2AG17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000572</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000097">
        <property type="protein sequence ID" value="MES1918630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="167"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="169"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="217" mass="25287" checksum="F150B1950C14596D" modified="2025-10-08" version="1">MRPDHVAKWFSRERLKRHRLLKEDQLQRSSSLDKRADFFLRMQKRRLAAQQRAGALFFGQRRNFQNHPARPGSMFNQNAARHNPWALNHNSMRAQPAQRGFAPFQAANGALEPLEHHFEEPVFRHRFRPAPFPGLSRNPFSAPNFDRRTRGPLLRPYFGYSHFAFGGRGRGKKRRAAPRARFESSLPPPPALPKPRAMVEMIKEAISELNESFSIKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGL0</accession>
    <name>A0ABV2AGL0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000553</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000093">
        <property type="protein sequence ID" value="MES1918609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="240" mass="26649" checksum="942A02B8E0259E00" modified="2025-10-08" version="1">MSTASFPVTHCTYPAKTDNVVISGCSGEKASVGTSCSFYCRDVSSFFSNTFIGSLRSLCTANGWDNNVRDNNNKFLLDKPFLNCKSVCPPLSSVGDLNILGNCENNLKQQDGKKCTVTCINGIIKQTQKREIDLICNNGQWAIIPNTILDYKIECISDYVAEKLPISLPSYSKCPDIELNHACKTVNNRFICSVWCPESLINGFDKISIDLTCINGKWTHIVKGRIVFLREKLTCASFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR7</accession>
    <name>A0ABV2AGR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000604</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000104">
        <property type="protein sequence ID" value="MES1918669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13589" checksum="87F6F20600F8DB54" modified="2025-10-08" version="1">MNRSQNHSETIRNTFETTLVDTDSEISYTDSENNNETLIEMRERRNGRLAKQRKRVSTHRSNNTYFAGKSEKEILRKKFVNFFYKKLPQSSESEEYSDEEIEENALFNRFRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS4</accession>
    <name>A0ABV2AGS4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000786</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000149">
        <property type="protein sequence ID" value="MES1918891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="32130" checksum="7EC6284D68A61BE1" modified="2025-10-08" version="1" fragment="single">MENSNLLKIDINKFNEKDFPDNGSASLSESKIEEIVERKFSELNLNQNSKSDNSSIPNYDYYTIQPGSSSAFLKSLESFNHSKINDLNIVLEQIKSSINLKDNKQKSSKRALNKILIRLKSVNQTRKHFLVMLKHFSGRLNEQLSLIENAEDPKIEEDIFSENDENENNLSKRLDFLNFEFHQVEKEIFGLSMCLKEQSNLYFERVLSSINRDLKEENFNFMPINKEKLLDFEENYVERESKYMSQIDKKIDRQSKKNFNKIENNFAIKNENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY1</accession>
    <name>A0ABV2AGY1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial</fullName>
            <ecNumber evidence="10">1.3.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">SDH1</name>
        <name evidence="13" type="ORF">MHBO_000814</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a quinone + succinate = fumarate + a quinol</text>
            <dbReference type="Rhea" id="RHEA:40523"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.3.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="10">Carbohydrate metabolism; tricarboxylic acid cycle; fumarate from succinate (eukaryal route): step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Mitochondrion inner membrane</location>
            <topology evidence="10">Peripheral membrane protein</topology>
            <orientation evidence="10">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.1" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000156">
        <property type="protein sequence ID" value="MES1918925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008177">
        <property type="term" value="F:succinate dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.100">
        <property type="entry name" value="Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="entry name" value="Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-dep_OxRdtase_2_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003952">
        <property type="entry name" value="FRD_SDH_FAD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037099">
        <property type="entry name" value="Fum_R/Succ_DH_flav-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015939">
        <property type="entry name" value="Fum_Rdtase/Succ_DH_flav-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030664">
        <property type="entry name" value="SdhA/FrdA/AprA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011281">
        <property type="entry name" value="Succ_DH_flav_su_fwd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014006">
        <property type="entry name" value="Succ_Dhase_FrdA_Gneg"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01816">
        <property type="entry name" value="sdhA_forward"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01812">
        <property type="entry name" value="sdhA_frdA_Gneg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11632">
        <property type="entry name" value="SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11632:SF51">
        <property type="entry name" value="SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02910">
        <property type="entry name" value="Succ_DH_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46977">
        <property type="entry name" value="Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56425">
        <property type="entry name" value="Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00504">
        <property type="entry name" value="FRD_SDH_FAD_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0249">Electron transport</keyword>
    <keyword evidence="6 10" id="KW-0274">FAD</keyword>
    <keyword evidence="5 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 10 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="4 10" id="KW-0813">Transport</keyword>
    <keyword evidence="10" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="FAD-dependent oxidoreductase 2 FAD-binding" evidence="11">
        <location>
            <begin position="39"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="Fumarate reductase/succinate dehydrogenase flavoprotein-like C-terminal" evidence="12">
        <location>
            <begin position="489"/>
            <end position="539"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="602" mass="66993" checksum="5CE4778F5B91262E" modified="2025-10-08" version="1">MFRFGKRIAKPTLESKHRNLKHFSNFKFEPYNVIDHEFDCVVVGAGGAGLRAAFGLAKEGFKTACISKLFPTRSHTVAAQGGINASLGNMHKDDWRWHYYDTVKGADWLGDADSIQYMAREAPAAVRELESYGMPFSRTKDGKIYQRAFGGQTVEFGKGGQAYRTAAAADRTGHAMLHTLYGQSLAHDTQFFIEYFALDLIMQNGVCRGITALCMEDGSVHRFKAHKTIIATGGAGRTYFSCTSAHTCTGDGNAMAARSGLPNQDMEFVQFHPTGIYGAGCLITEGSRGEGGYLKNSNGERFMERYAPNAKDLASRDVVSRSITIEIREGRGVGEHKDHIHLHLDHLPKELLAERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGEVITIDNCGKDKIVPGLMACGEAASASVHGANRLGANSLLDLVVFGRSCALQCRDTMEKGKKHEKFAEDAGEVSLARLDKLRRANGEFSTSEIRLKLQKAMQRDAAVFRTGETLANGIKEVKKIFEMFDNVKLSDRSLIWFSSFHRSHYNNKTLLIWLQQQTKKEHRFDRNFGTRKLVNNGDTNSELCLYPRRKQRSSCERRLSRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ6</accession>
    <name>A0ABV2AHJ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">CAAX geranylgeranyltransferase alpha subunit</fullName>
            <ecNumber evidence="5">2.5.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RAM2</name>
        <name evidence="5" type="ORF">MHBO_001015</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein prenyltransferase subunit alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.5" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000211">
        <property type="protein sequence ID" value="MES1919151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033844">
        <property type="term" value="F:galactose-6-sulfurylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.120">
        <property type="entry name" value="Protein prenylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002088">
        <property type="entry name" value="Prenyl_trans_a"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11129">
        <property type="entry name" value="PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01239">
        <property type="entry name" value="PPTA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48439">
        <property type="entry name" value="Protein prenylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51147">
        <property type="entry name" value="PFTA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="13263" checksum="7D9B3B920DF36A26" modified="2025-10-08" version="1">MKEVSKRALLLTTAAIPYNPTNYTIWHWRRKCLFELNEDLKEEMTFSEIIMKRAPKNYQIWFHRREVIKKMENFDLENEFKVLKQCLLQEPKNYHAWSHRLNFKNIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL5</accession>
    <name>A0ABV2AHL5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001039</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000217">
        <property type="protein sequence ID" value="MES1919175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00084">
        <property type="entry name" value="Sushi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sushi" evidence="2">
        <location>
            <begin position="61"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="36561" checksum="AEF0BF09278FC9BA" modified="2025-10-08" version="1" fragment="single">NCKKYPKEKAKIYCKNNQIYLLNNNENGISNVFSQKLFLEKCFRCDKNAIFNQNLVKFECFSQTENEFKIGEKCKFFCENGFSVFGKNLDHFFVVCTKNGWNYDFEKEISCKIKSNFCFFAGLPLNLISINSTTNGIENKQQINATCTKSGLKALIYCDNGLFKFNGNQNVDENNTNSFCKPRKDCSLESLVELMKRKNFMLTTTNCVLKNQNDKNLEKFCETKCNALNDLNYNKSINLDKRIYCVDFNFMYKDNFGELKSLKLNDGVFECKMKRGKACKLSKIENFHFKKTALEYEKECINGINLDPWEHCVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN8</accession>
    <name>A0ABV2AHN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000221">
        <property type="protein sequence ID" value="MES1919187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="141"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="225" mass="25001" checksum="AA02E802AC157322" modified="2025-10-08" version="1">MQNLSPAKMLSNERKLDTERAKWICEKALDSGSFYNPAAAGRFTVYEAENYLALYASVQPTLDDTCENVDVEAILNRVNALKILPNVTDSVQKLIKANLTADAPIPSTFVEAVGQAHAQELFVEYSLANAPPYESTAMDKLSVLGIFLSAFIIQQAVFGIYCSLLNKSLKSWRIVQTGGMVMVYLLYITMALVGYFGQLQLVGETVFEKMNLRYFVDTGEIDYGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP3</accession>
    <name>A0ABV2AHP3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Tetratricopeptide repeat domain 27</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TTC27</name>
        <name evidence="3" type="ORF">MHBO_001048</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000220">
        <property type="protein sequence ID" value="MES1919185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044244">
        <property type="entry name" value="TTC27/Emw1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16193">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16193:SF0">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0802">TPR repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="265" mass="31455" checksum="FEB5D06486C4BAC7" modified="2025-10-08" version="1">MFEFAKLSIYFFVVFNWLGLDYKYESKLHFLENLFNEELKTKSDQALSIQGERFFKMTKYPFLLYVSIRSFQSIRKSDKMLYNMAQWWLARCYCIQQRLLSHNSSVIRERLYAIYNFLEENPSSLSKSEKIEFYLEQCMANLNFNEEKRAKQNFEKAKSLLNAKISIKGELGKATKHQEKSIPQLKLVFERKDVLRKNSTNSKKIAGKSNTIKNVPLDDKDILEQIEFDSEKGIFDLDKIECDFVFCFSELLKVFPILFSKFKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ3</accession>
    <name>A0ABV2AHZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001163</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000252">
        <property type="protein sequence ID" value="MES1919308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19036" checksum="95C07C58882F0823" modified="2025-10-08" version="1">MKVQNLVQCIGLFSTSEDESKPNLEALVPKGFFDDCEKEKLALAKVFAEDQFSNKKSIAFDNDFVVCEPDLPKTNHFSFQSRTGKTFFGTSLRFHETSLRGDNYLCRFLFVMTTTNQFYFSEMLSKLVFLSCVVDRLPEPLLFEHLFVSLPRTSPSQSQIVLSIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI33</accession>
    <name>A0ABV2AI33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000254">
        <property type="protein sequence ID" value="MES1919318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="226" mass="26450" checksum="FE17514B41B6036F" modified="2025-10-08" version="1" fragment="single">MSDFCIKLNKIIGLQKYDKFSSEIDWDENGKKLFFDCIENNKILSKNDFDRALAILLNFLGFSYDSKSEILRILKALKILIKNSKFCNDRNGQILKTFRIAISTKNAEILDILFLFIFETAEIFIEKTDFLYKNDFEEIVLRILDEAEYVQTINNDIDYNLAKTYSKSIKLMTKALKFHSVLYFQKIFNVALNYLKSDCGSVVENSIETLEIMFDICPERASKYFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI50</accession>
    <name>A0ABV2AI50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001199</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000263">
        <property type="protein sequence ID" value="MES1919352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="298" mass="35094" checksum="32610F1EFA88A913" modified="2025-10-08" version="1" fragment="single">MDDMNDIRELLRSLDIGRQYIRYLRKNKITTIDRLEALSKSELNRIFGDDLDGSAETLWEWIEENKDKEYVPPATNKTVVIIKDDRNDRNEKRESRKVKNLKYLEKVAKKIQKSKHFVVQNKTFLNKMHKNVINGRKISKSISFAENIDVKKANEVANDFLDEGFIICINKQSFKDNSNSYYKFYINDNFEELNGNFFQEKNLEAKKEEIINSSVSKISELTAKSCTKIENDFLYLEDRLETMDKILNLAQKGSFLHGNYEYCKDEYTFIKYIGNILDNLDGYGVTDNQFDVLKDERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI68</accession>
    <name>A0ABV2AI68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine-protein kinase smg1</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SMG1</name>
        <name evidence="2" type="ORF">MHBO_001212</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000268">
        <property type="protein sequence ID" value="MES1919367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="349"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1020"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1020" mass="120085" checksum="5653571FBF147872" modified="2025-10-08" version="1" fragment="single">ALKKDKRLITNGKLLKLVKKIWTEFRGATIESKSLLLLLNQISSKNIEQILHDFPKPKLKNNILMPQKMFCRDNDSPPLTKNDVKTILEIMENPKKEYFKNGGKISKMSKILLNDFAENNFGEQFCYLLQMLSKYFVTKKLSSYIGNPQKTLNFLRKICQQTEENKLKNFYSNYFLNNFMQIVHTKIAKFSTNPNFFQSNANKCHKFFSRIFFVLFETSYRNQNYSEASIFGENSLQVLLEQKNKKSANNLLFKLCECYYFLETPDCIGGILDWYQSNFNEDFSILSYWKLALISESKRQFEEAIENFTKILNHFKDKTDQTNIFYKNKVLQHIEHCYNPLLLDNPNNSYGYNNNNEKNDSNKVTQSDNEKEFNKITSNKQKMVENLKKFGELNFYVKFDKNIENFEIGDIKKEILIKNKLLLDNLRNVENFDVSDNELVNEIKLLNFILKNKQKVVKMASENKNFDIKKLKRFNLVNYRKFMSKNKNFKCSKIAENLVNFGNNKINFGNDEINFSDKNSIDNIFDKFLLSKTVSNLEKEIIEKDFCESLLQLQKIDDYKNCFEIATDIPKIKENQKIENFEEIIFDNLAKFQDKNFNQKTTVLMADFIFEFAEKIFDDFRDFLLPIGYFEEDNMRKKIESFFIGEDIDQILSKLKKYRKLISLGLRFDLSTLNQNSSDFRNTKNIFRILETIQNNSNIVDEGIINTINNKISGKILKIAFSQILAILKTEDNIAKIFKNLVKKFCSENFDFSVFPLLCLQEKYFCSKNADSTKDFIFLLKKTNLKLTENTQKAITEFKRISFLWGETCAEKIENIKSAFPEALNHFAENFETFKDIPKTDCALVMSKFGAFKKIATIIQNLRKNIRNPTTPYENRFYRENGANFEKVYKLFLQIGKIIKPDKIEFREHLLEDRKAEAVRKIGFVRKEIFSILDKICSSYKNEHKWQLQDISPLLTKLDFVVGGWSEMSESVKVAKIDSKISLMRTNRPKKIDFIDFNGQKLRFLLKSKENLVVDETFVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA9</accession>
    <name>A0ABV2AIA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000262">
        <property type="protein sequence ID" value="MES1919347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10340" checksum="EE82936E4AF2802D" modified="2025-10-08" version="1">MNRPKRALRGFHQNIHRTDSSDFYEFKVSGSNWELVLVADSEDVDLYISTQHGEVWFNFHLAGFLQSRVAAGQFGKRQEVFRPRPIRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC7</accession>
    <name>A0ABV2AIC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001246</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000280">
        <property type="protein sequence ID" value="MES1919408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="318" mass="37331" checksum="86A786724644402A" modified="2025-10-08" version="1">MFVLNKSKFRTPHNLKLGSIDIEKRFIFNNLTPLDKSKRSNPFVDKLSKQPKNSAQIINEHIPKSIRTKYHIAKDIPSPLVKRLLYKMHKKAPIHWTKQRLASAFGFRKDQIEFFLKCVQIEENIKETFHSDLERMSKIDRSNRSQFTRERQKCRFYGKKKEDLSNHLNDSLYVQIVPFLSQKNIIYSPHKQYLEEVFNRRTGMFGYNKRDKCFGSTPDGLLDYDLGPERPSLKELKVPRKGVGSGKVIEEVKKVRPLKAPMIITEISKIGSYKSNKKRLPTRVRGKDGVMRHTTFLEYKTIRKRETGGKTFKKFVPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE7</accession>
    <name>A0ABV2AIE7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001291</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000298">
        <property type="protein sequence ID" value="MES1919461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00201">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036020">
        <property type="entry name" value="WW_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00397">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51045">
        <property type="entry name" value="WW domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="7"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="34"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12504" checksum="568173E3A4B97AC9" modified="2025-10-08" version="1">MKKFGRWRGALDKESGRIYYYHTFSNKVTWVKPKEMVEQENRRKAQKMKKYLKKKNKNKNEVNEKVIEAFQSTGLRFFMDSAAISVIDFCLDRKDFNGAKDAVIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN9</accession>
    <name>A0ABV2AIN9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000982</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000203">
        <property type="protein sequence ID" value="MES1919117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11066" checksum="98EE3A62A0C21A2B" modified="2025-10-08" version="1">MKNFKNRETTLKSKPITDFDSKFVVSKLEDETNALIESARNLLVTIALYILMATILNALMDLVLNLVCFYSEEINLDNGGTSVFATKIDVETKIFIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT5</accession>
    <name>A0ABV2AIT5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001354</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000321">
        <property type="protein sequence ID" value="MES1919542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="113" mass="13010" checksum="DB8B89245231C620" modified="2025-10-08" version="1">MPGFFVYKGFDIPVIRRQTKSKNGKNAAEKITFPKEIEFILFAFKHFAIEKTDSEMALKLIAQLRAIVSKYPNYSNLVVLREQIAKIAVDSKRKEAFLKKLSVKTTKPVFKEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIT9</accession>
    <name>A0ABV2AIT9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">DTX3L</name>
        <name evidence="10" type="ORF">MHBO_001386</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the Deltex family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000330">
        <property type="protein sequence ID" value="MES1919579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.720.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039396">
        <property type="entry name" value="Deltex_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039399">
        <property type="entry name" value="Deltex_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039398">
        <property type="entry name" value="Deltex_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004170">
        <property type="entry name" value="WWE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037197">
        <property type="entry name" value="WWE_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12622">
        <property type="entry name" value="DELTEX-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18102">
        <property type="entry name" value="DTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02825">
        <property type="entry name" value="WWE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117839">
        <property type="entry name" value="WWE domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50918">
        <property type="entry name" value="WWE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="WWE" evidence="9">
        <location>
            <begin position="19"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="8">
        <location>
            <begin position="137"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1919579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="37700" checksum="0D8C62F7652A5DC5" modified="2025-10-08" version="1">MNNEQKLINFCFPSFKLISGSPNFDSLFTSMTWQFSSRKGWINMDAVASYRLERALFENEKFVYIDIGHHRFSIDLANSTQTNLNTGNTRLIRRTRFFSNFCGVYDKSERKSEKRVEKIWVSLSKIEISNLDQDEKCSLCLDTFALDKREIGRLNRCKGHFFHKECGSEMSIVKYIDRFKKCPVCKEFYFPPEGRRPFGRMFIKRVPIALNGFNSDESWTIKFYFPPGKQSSLHSNPGAPYKGETRYAYLPDTQKGQAILIRFIKAWRKKLLFNVGFSISRQKENVIIYDGVHMKTSIVGGLYGYPDEGYLDRVSVELDNIGIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ04</accession>
    <name>A0ABV2AJ04_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001459</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000360">
        <property type="protein sequence ID" value="MES1919668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.79.10">
        <property type="entry name" value="Nucleoside Triphosphate Pyrophosphohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004385">
        <property type="entry name" value="NDP_pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00052">
        <property type="entry name" value="nudix-type nucleoside diphosphatase, YffH/AdpP family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11839">
        <property type="entry name" value="UDP/ADP-SUGAR PYROPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11839:SF15">
        <property type="entry name" value="URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE NUDT14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="Nudix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="214" mass="25446" checksum="529DB924F671E307" modified="2025-10-08" version="1">MAFIRKTLHCKKYFSKIENIEIKNCKKSNFFKPKTLFYRQNGIDKKWDFLECHESVSVLLYHLERKSFLVVKQFRPPVFASYSRKNKIDKNSNNYKFGCTYELVAGLIDKNKNLEEIVSEEVEEEVGYKISPDSLKLITGYTGNVGITGRFSKMYYGEIEKSKRLENYLEKETIEKVFVQTKMAKEFLKKQKFATIGLHFSFYWWLSEMSDLYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ20</accession>
    <name>A0ABV2AJ20_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tetratricopeptide repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000303">
        <property type="protein sequence ID" value="MES1919479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="214" mass="25448" checksum="8A9FE6AC29661B05" modified="2025-10-08" version="1">MSIESSELKRLFATGKYQKALERFNELQESKTIFKTAKNSFFALHLKIILKLTNRKEIDSFYFIDQLYNLKKSTLERNPKVEKSTFDCLNYNISLLKLNAGHLKDSENICKEIVSSSKNEMFLKSIYILLDIYFLCKSNEKIEYFLEKLKDKSLLTDLRKNKKIAEKSDFEDRAHLIWAFYYLSRFSVVTKNFDEAEKHLNQSFQVFAKLKLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ4</accession>
    <name>A0ABV2AJJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001588</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000413">
        <property type="protein sequence ID" value="MES1919828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007149">
        <property type="entry name" value="Leo1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23146">
        <property type="entry name" value="LEO1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23146:SF0">
        <property type="entry name" value="RNA POLYMERASE-ASSOCIATED PROTEIN LEO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04004">
        <property type="entry name" value="Leo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="17162" checksum="8B0D80DBAB77275A" modified="2025-10-08" version="1">MTEKKKEQTEKDFEYEKLISDDELVYNIRMSNFIKFDKNPFRFNENGKKVDFDSNKDENGNFVLRWRNNFKNDKFFKESNSRFVEWSDGSKQLVIGTKAFNVSTESLPKKSYLFLRKEKDKHILLKSISKQLIVQSTLKRLKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJX4</accession>
    <name>A0ABV2AJX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001676</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000447">
        <property type="protein sequence ID" value="MES1919932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="22715" checksum="A215F7022BE86833" modified="2025-10-08" version="1">MSVKSKRYWLIKRKTTQLFIPKRFEYTFERNRKMEKNISKLNGKRYLNPIKSRWFGPTPAIKSFVPEKPVVLKLDLSRNGMFYFVAIVAVLVSIIVLTSSTIPIKNLKRKTKRETKILKRNLKNFSLQNFVFKTVEIKDRIVFSVKNLNVEEDQNLQNFDDIESEKMTVYERQEQQFEEIVKDIDTRKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJX8</accession>
    <name>A0ABV2AJX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">CDC25A</name>
        <name evidence="8" type="ORF">MHBO_001542</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MPI phosphatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000394">
        <property type="protein sequence ID" value="MES1919769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="entry name" value="Rhodanese-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000751">
        <property type="entry name" value="MPI_Phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10828">
        <property type="entry name" value="M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10828:SF17">
        <property type="entry name" value="PROTEIN-TYROSINE-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00716">
        <property type="entry name" value="MPIPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="Rhodanese/Cell cycle control phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="4 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="7">
        <location>
            <begin position="171"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="312" mass="36745" checksum="F9903C9E2F94D310" modified="2025-10-08" version="1">MNSKFKPVESKTDLVQKKLTAILPIYPKIKRIPISVSDNNKMSQNIIRNPKIKNYFTSKKSTTEEDQPKILKISPKFGKILSLKITKKDKISNDYKFSKISKSLGFVKFGKSKFSQHRFYHNWIQKNIFSTSKSKNSIEWVFKKLKCEKGKLFPSISPKFLIKILCGEFEIFHKIFVIDCRNDYEFSGGHIKGAININTAEGIKKFYKKLSCELWKEKIAIFFHCEFSSQRAPRRARLFRQIDRENNRYPKIDFPLVFLVDGGYKRFFELEAARSLKFCVPDGYVSMFDVGVREKRRKIRQTKLREQIRGVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE3</accession>
    <name>A0ABV2AKE3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RGS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001609</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000421">
        <property type="protein sequence ID" value="MES1919853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00615">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="RGS" evidence="2">
        <location>
            <begin position="267"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="337" mass="39481" checksum="9DDCA6321C9FCF57" modified="2025-10-08" version="1">MIDLNKSSGFNATTKLEVVIYFMAMSKLVEAVAYVVFILLRRKFMPLKKRSTRVLLAEVLLVLVTYEMTFAYRFGFLKDKKICWFLSVFKLNSALLFHLVLCIRAVAVWVSFSVQDHRFVFKKFWIARPMAIFLSLLMIIPNILAPMWEPRLLEMTARNCSVRGTMNLIFILSFDAFYLFFIYKMRKNKDSLYFRKELTTICAVNANIILVFIFNALKGFKIVSFVIQITILECTFIVIVIIPVIMTFRVEHKQKIVQKSVTDLPKTLGRILIDPADSLKFRHFLKKEFSVENLDFLEELKLFKLDTLSIGKNHHIEIYKRFIRPDGLQTVFNQICS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF9</accession>
    <name>A0ABV2AKF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001861</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000530">
        <property type="protein sequence ID" value="MES1920151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8341" checksum="63AD5A1803BD10EC" modified="2025-10-08" version="1" fragment="single">EEDNISKIFLVLSIVFIFSGVMYAFIILNEDYICKYCDPKSYFGGFAIVANTGLIALSGFLARIGNNVGTASEDIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS2</accession>
    <name>A0ABV2AKS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001931</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000566">
        <property type="protein sequence ID" value="MES1920240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="22640" checksum="D9157C41A5DCAE9A" modified="2025-10-08" version="1">MGGGWLPEITCDKTDCHSQPNVLNAIGVSLEECKNRNKTYVCNVKCLENFKLDGDNPVCQENGSYIPVSQCKGICKNNYLPTNGDASLSEKCEGKFVGESCDIKCLPEYLKLGNNSICNFSGETFEWSDLPKCFKIVDNHMFIIIPLVIAAIMGISIILAMIFLKADIKPEIYFIDDEIENETNVELQYADPEIKIEDIDYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKV8</accession>
    <name>A0ABV2AKV8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Serine/arginine repetitive matrix protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">SRRM2</name>
        <name evidence="9" type="ORF">MHBO_001999</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CWC21 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000607">
        <property type="protein sequence ID" value="MES1920316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd21373">
        <property type="entry name" value="cwf21_SRRM2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051372">
        <property type="entry name" value="CWC21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013170">
        <property type="entry name" value="mRNA_splic_Cwf21_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36562">
        <property type="entry name" value="SERINE/ARGININE REPETITIVE MATRIX 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36562:SF5">
        <property type="entry name" value="SERINE_ARGININE REPETITIVE MATRIX 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08312">
        <property type="entry name" value="cwf21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01115">
        <property type="entry name" value="cwf21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="CWF21" evidence="8">
        <location>
            <begin position="56"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="152"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="152"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="170"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="180"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="24474" checksum="2F99A8A4B4AA435F" modified="2025-10-08" version="1" fragment="single">MSYNGIGLVTPRGSGTSGYVQRNLAELKKTGFHLRKKSPFLKLKTLPVRKPNKIILEHKRKRRIEVLCAQLRQKLEKQGKPEAEIALKENDLRQKHKNSSLEDLEDNAVETHAKLKAQQKRNERLRSALKINKDHKTGEAFHFAELKQKRDEEKLKRTAEERLRSKKNYLSREEDFERMARRRKEREKGKSNVRKRSKSVKTDKRDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL02</accession>
    <name>A0ABV2AL02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cysteine and histidine-rich protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">CYHR1</name>
        <name evidence="8" type="ORF">MHBO_002020</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the ZFTRAF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000617">
        <property type="protein sequence ID" value="MES1920338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039338">
        <property type="entry name" value="ZFTRAF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001293">
        <property type="entry name" value="Znf_TRAF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23059">
        <property type="entry name" value="CYSTEINE AND HISTIDINE-RICH PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23059:SF4">
        <property type="entry name" value="ZINC FINGER TRAF-TYPE-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02176">
        <property type="entry name" value="zf-TRAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50145">
        <property type="entry name" value="ZF_TRAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="30"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="TRAF-type" evidence="7">
        <location>
            <begin position="94"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="TRAF-type" evidence="5">
        <location>
            <begin position="94"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00034319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="355" mass="40706" checksum="3465782830E66F74" modified="2025-10-08" version="1">MTRNKRVKIFKEKKSPLSLQESLKKDELYCNVCRDFPKSKEIFQCKNSHLLCSFCHSRILEKDPSTCPVCRIKLSRENPCRSRLAESIISKMVVHCPNTLCAEKLYNEDLRRHERELCPFRNARCKFFSIGCEWRGIAKKKRKHEKSCAIRSLSADNILKFCRERSAIREAAERKRIAVLEKERRLVAALSQRSRCVVVRELKMYSSGNRRVSGKLCKVFVSRRFNVFECVFYLEVVVAVGDNLNEQVVVTPTVVTNASSNVPGNNNISSVVGNNGVANNNNISSVAVGDNKNRTLIAATNNIETKGETINFFISKTTNLRFLQRKFCCYKAKFVFDKANFVFSKQILLLQTKFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL33</accession>
    <name>A0ABV2AL33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Transcription factor TFIIIB subunit brf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">BRF1_1</name>
        <name evidence="12" type="ORF">MHBO_002018</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000616">
        <property type="protein sequence ID" value="MES1920337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011665">
        <property type="entry name" value="BRF1_TBP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618:SF4">
        <property type="entry name" value="TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIB-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07741">
        <property type="entry name" value="BRF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Transcription factor TFIIB cyclin-like" evidence="10">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="Brf1 TBP-binding" evidence="11">
        <location>
            <begin position="167"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="193"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="193"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="207"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF07741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="31959" checksum="6EDA8A57C8077C98" modified="2025-10-08" version="1">MQEDWIHWGRHPSGLFGAALLIAARLHGFKRSRKEVSNVVYITDVTIGLRLGDFSNTPSAALSMAEFDNKDLSPCNPPAFERSQNRQTEKDLKIKWPKKLPSRPKDVQNWIENGMGFGKHDKKIKVKNAEHFEEKFEDPILLEENFEDEEENVFCDSEDLDRMADLYIIKDTKEKDRKFKIWELMNREWTETKKRKEEEKRLEKEMKSKKKPKKERKSKRTMPLGYKTVLEDFEKEESKIYNKIGDEALLDNLLDEKIDLDLFGIDGIDDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL94</accession>
    <name>A0ABV2AL94_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">phosphatidylserine decarboxylase</fullName>
            <ecNumber evidence="3">4.1.1.65</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002093</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="11">Phospholipid metabolism; phosphatidylethanolamine biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.65" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000663">
        <property type="protein sequence ID" value="MES1920425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003817">
        <property type="entry name" value="PS_Dcarbxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033177">
        <property type="entry name" value="PSD-B"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00163">
        <property type="entry name" value="PS_decarb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10067">
        <property type="entry name" value="PHOSPHATIDYLSERINE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10067:SF6">
        <property type="entry name" value="PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02666">
        <property type="entry name" value="PS_Dcarbxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="4" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="9" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="10" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="317" mass="36032" checksum="EA347A5D8B6A3C7F" modified="2025-10-08" version="1">MNKLFQPKVLKGSLVVAASLSFYYFKKRKEPRQGNFRVIFYKSLPLRFLSRIAGILSTQTVPNFLRKPIFYSYSAIYGINLSEVQPLNSFRSFGDFFSRTLDIEKYRKIADSDIVSPVDGRVSSFGKLKEGEMIDAKGIKFSLKKFTGRSQEQAKNLHFVAFYLSPGDYHRFHSPVKWSIKRLKHFSGNLLPVNSSMTNLIPSMLCSNERVVLEGTWKHGYCSVTPIGALNVGSIVLSKTIDPKLSTNLPQRNAQKEILFEEENSNGIKMPKIVELGFFKIGSSVVVLYDIPEDKNFLFRIREGQKIKVGNEIGYVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB6</accession>
    <name>A0ABV2ALB6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Novel STAND NTPase 1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002126</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000684">
        <property type="protein sequence ID" value="MES1920461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050238">
        <property type="entry name" value="DNA_Rep/Repair_Clamp_Loader"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049052">
        <property type="entry name" value="nSTAND1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669">
        <property type="entry name" value="REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669:SF1">
        <property type="entry name" value="REPLICATION FACTOR C SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20703">
        <property type="entry name" value="nSTAND1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Novel STAND NTPase 1" evidence="2">
        <location>
            <begin position="22"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16399" checksum="A17709B4C290DD46" modified="2025-10-08" version="1" fragment="single">MLWTEIYKPLSLGDITTQPESSQILQKLSESENVPHILLYGPSGSGKTSLTQSFLAAIYGKGALQTKAETKTLKVSPTKTIEFETLSSIHHIQMNPSLSDNYDKNIVQHTLKEMASTASFKSKNSKNFKTVVIDQTEDLSKTAQHSLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD4</accession>
    <name>A0ABV2ALD4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4460 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001823</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000515">
        <property type="protein sequence ID" value="MES1920107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="217" mass="25795" checksum="C19158EC0F10EA7F" modified="2025-10-08" version="1">MADEPEKLPLENQKTFLKKVSIPAKELLKVERNHKRDSKTRAEWRKKKILIRKSPLKSKNNDCSVSTWRKFEKKLNSKNEIFGNKENLRKAPIDEEALKRMYEQFGESTVDTILKFIDKNNFNFYVTTSKLNFDLKKKMTLEEIKNIYFSIHPDLLAKSKFNFNLERIRKKELNLLHRRTTATEEKILDLSLEKKALYEVFDFHFANHFASLCSICC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW2</accession>
    <name>A0ABV2ALW2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000795">
        <property type="protein sequence ID" value="MES1920666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="109" mass="13525" checksum="2EBAB9D73E8F7BD6" modified="2025-10-08" version="1">MLVSLRKKVFGKISSKIYDPHKVQDCSGGHKRYEKHMTAKIIGPEVKNYYCENEMQKIFKGSMYEDMESQRRQKWLEHRLKVQPDYKRWKDKNREKRPKKEFEWRHGWY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AME0</accession>
    <name>A0ABV2AME0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000900">
        <property type="protein sequence ID" value="MES1920839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="11038" checksum="C1DAE9E98B0F9385" modified="2025-10-08" version="1">MSDNTVTELNAKMKNLSIKRIKRKSEDDELKLLYKKIMPEIGTYNKNYVGYDPDDMSKLAYLDQDNFEVDNILEITALLKNTHLDDKDHLSYFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV3</accession>
    <name>A0ABV2AMV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA wybutosine-synthesis domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002425</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000864">
        <property type="protein sequence ID" value="MES1920789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013917">
        <property type="entry name" value="tRNA_wybutosine-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034556">
        <property type="entry name" value="tRNA_wybutosine-synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13930">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13930:SF0">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE TYW1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08608">
        <property type="entry name" value="Wyosine_form"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="tRNA wybutosine-synthesis" evidence="6">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="96"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14748" checksum="828631803655C7A9" modified="2025-10-08" version="1">MSNIPFHIEVRHFAEKIVSRVKEDYAIACEHVHSCCVLIAKKSFRIDGKWRTWIDYDKFLKLLEEGGKFEPEDYTAETPEWAVVGAAEEGFDPKEKRFYRKKKEKSERLLNELTKAKKRIESDPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMW6</accession>
    <name>A0ABV2AMW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002313</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000793">
        <property type="protein sequence ID" value="MES1920662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="249"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="80"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="249"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="263"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="276"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="321" mass="38114" checksum="3A2FFEAA4C489CB5" modified="2025-10-08" version="1">MDGKQKQTEISENETKITSTTKDAAVVESKTEKTAERDDANRDRAEKEEKPTLENLEAFTTDEREKAFKNQEQQTASIFKFEEEMREKKQKEAQEMEDQRKKNEADMFEKQKEARRIMEEQKKEKEEMEKKEKEQLEQKQKADSKKKEETIKIFEMRREFSLLDEKARAEKINQISAQFQSFVDSNDEQQIVWRFSENAKIAIPQDEITEILCKHCSHHSHLPLLNKALDAIRTNDGKVPEKLEQHIKKLEEEKEEEPRDKISEEEDKMEETNEEEKEKTRKSEKEETRKEKSATEKKEKTEKKVPKTKKEKSSSKCCAIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN05</accession>
    <name>A0ABV2AN05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002636</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001043">
        <property type="protein sequence ID" value="MES1921036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="22405" checksum="F86F7567187C631A" modified="2025-10-08" version="1">MEETTNSYIKFTHLLLESLQEEDRELILKRIVEKTNNFCKMSEFSIDKLLSSRQMLLSFGKERRCEEDVKLALTKIPYNKNGFKSYLITFAELFVDYNEWKRKKNQTKAKFEKISNNVENLKFGRNDDSKLSTTDSEESSDFRNETENKNLFNNRKRKRSFERTREKTQKNENDDLLNTFVHFYIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN18</accession>
    <name>A0ABV2AN18_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RNA exonuclease 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002518</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the REXO4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000942">
        <property type="protein sequence ID" value="MES1920904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06144">
        <property type="entry name" value="REX4_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037431">
        <property type="entry name" value="REX4_DEDDh_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047021">
        <property type="entry name" value="REXO1/3/4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Ribonucl_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12801:SF158">
        <property type="entry name" value="RNA EXONUCLEASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12801">
        <property type="entry name" value="RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="8">
        <location>
            <begin position="37"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="22720" checksum="CE520DB4C327B346" modified="2025-10-08" version="1">MNWLKQKGISKKAKSSKQNAFERFIKKPKHVVEKMTACLAMDCEFVGVTERDINFLARVSIVNYDGQVVYDQYVRPHLKVKNFRSKISGIYKNHLKKGIDFTICRAKVAEIIDGRILIGHSIDSDLSVLNLKHPRELTRDTSTKESTLCPNNKRSLKKLVYEHFNSNIQTKSHCPIEDARATLQLYKLVEKKWGQIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR1</accession>
    <name>A0ABV2ANR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ubiquitin carboxyl-terminal hydrolase 38</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">USP38</name>
        <name evidence="3" type="ORF">MHBO_002852</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001230">
        <property type="protein sequence ID" value="MES1921306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02257">
        <property type="entry name" value="Peptidase_C19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050185">
        <property type="entry name" value="Ub_carboxyl-term_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="USP" evidence="2">
        <location>
            <begin position="59"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="347" mass="40000" checksum="BB8AA2ECFB0ADD0D" modified="2025-10-08" version="1">MQTALYFLSGFLGVLILLVICACCVLRNQSRKLERGISFITYHAPITVKHIDEKIYRVNGLRNIKCSCYINSVIQALGPIYPFYVELQKLGSQEDNVLGKLANFLSNFWSETEISEDTIDFETEDLIDEIRRAYNFKEDQQEDCNDFINKILTTLSTCEKDSYRKLFMLSTNCECGATSKDFQGLTIIMPGYPLIADENSLEEDENSLEEDENLLPKPLLPEYLLQDGINHALASECSCGRYIISEKPKILMIRVGKDFSNERKLEFPLMLDLSTHSVPIEPIQYKLKSYINYCTESRGESGHYFTFFKTDESWIKVSDNDVKTVKYEYEEISSKLVQTIFYSLVEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANT4</accession>
    <name>A0ABV2ANT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Poly(A) polymerase</fullName>
            <ecNumber evidence="2">2.7.7.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">TRF5</name>
        <name evidence="2" type="ORF">MHBO_002863</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.19" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001241">
        <property type="protein sequence ID" value="MES1921320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990817">
        <property type="term" value="F:poly(A) RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd05402">
        <property type="entry name" value="NT_PAP_TUTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="entry name" value="Beta Polymerase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054708">
        <property type="entry name" value="MTPAP-like_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045862">
        <property type="entry name" value="Trf4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092:SF15">
        <property type="entry name" value="INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092">
        <property type="entry name" value="POLY(A) RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22600">
        <property type="entry name" value="MTPAP-like_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="Nucleotidyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Poly(A) RNA polymerase mitochondrial-like central palm" evidence="1">
        <location>
            <begin position="50"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF22600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="17166" checksum="9AF5F30029C14851" modified="2025-10-08" version="1">MAQNFIAYDKNSENESDARDEKIASNSVAKKMAPWAENKNYPQKSFVLRLHEELIDFYNYMHATKEEHAIRVNVIERIRQLSKEIWPKSETHPYGSFTTDLYLPFSDIDVVILNVGVDPVNVLAEELKDRDLVSHIETITSARVGKSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ9</accession>
    <name>A0ABV2ANZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002923</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001304">
        <property type="protein sequence ID" value="MES1921392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="368" mass="42866" checksum="AA9D976A74B6EBCD" modified="2025-10-08" version="1">MTENDETVANQVLPKMQWYKIRFPDGKRKVPGAPLSSFLNVKFTEQLYLETVLANLLKYIYFRNEKWEHYSNFNFDNAFAIAHPQDGLVIKFQTHIVSGKLSMDTIFEKFLTFLKELKSEWTVYNWKIVSIFEEAVSRKDKNITDLSKVLLEFGHAYLENLYATICVHQPFKIFRKALGCEPIPETTKAADLSHETIVRQKLEWYTVVFNDKEVDLVGAPLSSFLNVKFATEKELKLILADLLKSIYARNENCGNNYEEMKLGNAYGMVHPVYGLVISFHTNLVKGKLSIDTIFERFLTFLKELESKWTVYKWKIVPIFEKAVSKKDKKKTDLDAVLLQFGCPEPIPFPRHRAQYILFKALGYTVFLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP90</accession>
    <name>A0ABV2AP90_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Condensin complex subunit 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002876</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CND2 (condensin subunit 2) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001259">
        <property type="protein sequence ID" value="MES1921339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022816">
        <property type="entry name" value="Condensin_barren_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13108">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13108:SF9">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05786">
        <property type="entry name" value="Cnd2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="7" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0226">DNA condensation</keyword>
    <keyword evidence="8" id="KW-0498">Mitosis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="168"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="578"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="578" mass="66236" checksum="FC941957A19DD5F0" modified="2025-10-08" version="1" fragment="single">MENKRRRLSSVLDNVVLSNNDQIGKKTKRRLSVKRASLLAPIRKNPSTPTKTKKRNSAPFLSPFKQVEDDKETLSDAQLSRLYTETIRLAAAGKITQKNTWSINLIDYIDDLLSNEKKAAEEKVTKSSSLFRKASNTLDASIKIYSSRVDSVHSQMFKVLGGLSSRFEEDQEQKDGKSQQQETTPKNKRNSKVVTLLTTDKAKAAALSEKDLSYEVDPMFFKMASAFDEGGAKGLLLNNLQIGENLQIVFDSDLKLEKIKLENASAAEKGEKVLATSEFDLILDDVARTSRDQQLCPLLPIFEEEINLVKKQISDLKNGDRTLSAQIRLEIDRALSGDSVFVSESDVPGQDRKSVFDQNFDRNVEQDFEDFEDFEDISEKQKTGNVEAVKEKTKNDLFLTDELYDENFENSEDFMNWAGPNFWSFRRNLRKKQISEKAENAEKAEKSRNEKMAKTEKLIDFGELLEIKVNIDERSPKKCLKRKRVFNTLPEDMHLKRDLFLRPFYRPHLIAKVDYNGFRMCNQSLLYIIWHLFCHDAIVARRSVRASRFGGHTTLATTWSYSLQIRCLEQSNLSPEMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR9</accession>
    <name>A0ABV2APR9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003198</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001611">
        <property type="protein sequence ID" value="MES1921670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12496" checksum="6944651F87B9752B" modified="2025-10-08" version="1">MSNSPKTVSSNNDTKKVADDIKHLDLSNRSGSPKKAESPQHRFWDTQPVTKSSCDFDFRGNQNQKRTDRRQKRLSEHSAEAVQAPEQILLGHVRHLERRRGFRSKSQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ47</accession>
    <name>A0ABV2AQ47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003313</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001757">
        <property type="protein sequence ID" value="MES1921785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="33"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8804" checksum="BF6E19B169345899" modified="2025-10-08" version="1" fragment="single">HPVPLHRNKHLVPLQRNKHPVPLQRNKQPVPLHRNKHPVPLHRNKHPVPLHRNKHPVPLHGNKHPVPLHRNRHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ85</accession>
    <name>A0ABV2AQ85_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Mevalonate kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003156</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001568">
        <property type="protein sequence ID" value="MES1921629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006205">
        <property type="entry name" value="Mev_gal_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43290">
        <property type="entry name" value="MEVALONATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43290:SF2">
        <property type="entry name" value="MEVALONATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="130" mass="14544" checksum="DA9C41610301F93D" modified="2025-10-08" version="1">MAAKPKIKITASAPSKIILTGEHSVVNGYSAVAFTTNFRVYVSIEENGEKDKIGMVLMKNGKICQFVNWRLSQFDKFDGEDLDKNRFDFNERFLKMILGIENEQNQKLEGLVKKASVVLLAVLVSTGLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA0</accession>
    <name>A0ABV2AQA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003172</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001582">
        <property type="protein sequence ID" value="MES1921644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8685" checksum="8146275C369223C3" modified="2025-10-08" version="1">MKMPNWALTVAGVAKKRDKEWEEIKESVKKGELKGFEEKKFDEKVLEKMDLENLENLEKGLDKEKKNLEKQYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD5</accession>
    <name>A0ABV2AQD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001879">
        <property type="protein sequence ID" value="MES1921871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047418572" evidence="2">
        <location>
            <begin position="19"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="223"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="343" mass="40461" checksum="E5846D852239CA22" modified="2025-10-08" version="1">MGKVILVQIIVLLLTANSEKIRYKDFGAAENYGQMFNVKKEVQIEKLTIYVHVPRFMFDCGQVSCQSNVRLYELDSNELITGIPFTQEANLNWTEIRPFVTINIPQKIVLREGIKYVWVISKEPKLPLYLGILKQEPENVKINANMVNKLEDGELWTVLEENLGFDMQTKVLNKIDFSGDKGLSEDFWEKSKKYKWEDNKLYGERKINITRKARTVIPKHKNLYLGLFIAGIVLFLLVLLVIVYQIWKYYDMKKLNRLIEEEKAYLRKKRAKHGDSLAYRLKRRKMKMEKRARDLEKWKKLGAKVHYMDDPLLNKTFVCVIKKGRSVDNEKREVDLNNETKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN7</accession>
    <name>A0ABV2AQN7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003509</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002030">
        <property type="protein sequence ID" value="MES1921985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17166" checksum="C0063E1247F65111" modified="2025-10-08" version="1">MRSLWVNCTDDGVPSVTSIFAYKITQACRHVSIDHGKILSGCKMNGPCVFYCDMFYQSRLGTRYGEEDCIFRGFVHQPSCQAAPTLYVVIIVPIVVVLFVFFLAISFFRRILCFRSLKTRELTETVVLTDSKKKPSAKSSSQQNELFEIID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR97</accession>
    <name>A0ABV2AR97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA cross-link repair 1A protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">DCLRE1A</name>
        <name evidence="7" type="ORF">MHBO_003513</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DNA repair metallo-beta-lactamase (DRMBL) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002036">
        <property type="protein sequence ID" value="MES1921989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16273">
        <property type="entry name" value="SNM1A-1C-like_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12650">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="entry name" value="Ribonuclease Z/Hydroxyacylglutathione hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011084">
        <property type="entry name" value="DRMBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23240:SF6">
        <property type="entry name" value="DNA CROSS-LINK REPAIR 1A PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23240">
        <property type="entry name" value="DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07522">
        <property type="entry name" value="DRMBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA repair metallo-beta-lactamase" evidence="6">
        <location>
            <begin position="252"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="35895" checksum="C8B39F22C89089AD" modified="2025-10-08" version="1">MALKSIPRNKKSKKSKRTKICPEHKIIKGTNYTVDAFCYKPFDQKMVFFLSHFHTDHYKGLLKSFSEGDIYCSPITASLVLAKIGVNKKYLKPLQIGVKHKIPIKPTNQIFSKSTYSYVTLVEANHCPGSVIFFFEIPNKKVILHTGDFRFGDQLKNNPICAKNKNVSFMYLDTTYCNPRFVFPTQKKCCEYVSQNIDKLKSDSKILFVIGSYNLGKEKIFVSVFKKTELQIYVDPKRMAILEHLNMDLNLETTFTTDSNKSRVHVLPLAKLNFGNLSKILKGNKRYNKIVAFKPTGWCGAFSISKKSKIDVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA3</accession>
    <name>A0ABV2ARA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002376">
        <property type="protein sequence ID" value="MES1922198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="157"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="26754" checksum="1E7FCB59A7CFBAA8" modified="2025-10-08" version="1">MKFKILYHEEDHVLETYFTQQDYEDMLANFLSYGSQLSSLEKEHFWIETKTMKIHEVVETIETEFYLIVYDDHCQKQWYFYGDSMNHRDHFALCELRNGCRIFSLFCGNTLKLHENANGDLINEQGEQIARPATPESEISSNGSDDTLLLFDESESDYQNSDSGVDSGVDENNNDEPDLHCHEEYEEIPEAIPAFVPDFICAVDRNHNYLGTWENEELINREKQCCSTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG2</accession>
    <name>A0ABV2ARG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Kinetochore protein SPC25</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003787</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002507">
        <property type="protein sequence ID" value="MES1922278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="5"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="200" mass="24074" checksum="7ACFC86E1392E592" modified="2025-10-08" version="1">MLDEVAHWNKEALKMENRVRQYEKKLMAVGVSLEYNREETKETEKQQEILINERNNLKIQCEDKDYLIRKYEKRENELMEQISDLKNKTEKNQNGKKFKNFEKLCECFTLMCGMKIEEIEKYFENESIRHFRCKSVNYKNTKMLEFEMKIDLSTNKANFEPLRLVDPANVLPDELKHKIEFDIFQLPLFLSKVLSVVNSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ2</accession>
    <name>A0ABV2ARQ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein TIC 214</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002602">
        <property type="protein sequence ID" value="MES1922332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="141" mass="16858" checksum="7454539254C9B199" modified="2025-10-08" version="1" fragment="single">KFTYNMIKLVLDPYEAYSPFDLNNWRRIRKTRWSGDDGFSQQEQGNKKSNWRNRLSTSIIKIENRIITSKDNQRKKRWGSQARTKLTIDDINLFQLRLEKVTVMNRKLLFPNAVPEKNDPFLKLEEPPPEYDKNVVRTNTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV6</accession>
    <name>A0ABV2ARV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003912</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002722">
        <property type="protein sequence ID" value="MES1922399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="6950" checksum="FF7A3E93E805DF8A" modified="2025-10-08" version="1">MRPVPCVRRRFPFMLQLSTDENKTFSHLFGGISARGASVVLNVVRPFAATNADDVALVLVLTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARX6</accession>
    <name>A0ABV2ARX6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003942</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002783">
        <property type="protein sequence ID" value="MES1922429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051553">
        <property type="entry name" value="Ran_GTPase-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45982">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45982:SF1">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00415">
        <property type="entry name" value="RCC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="RCC1" evidence="1">
        <location>
            <begin position="61"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="13783" checksum="5321B1340E915FF1" modified="2025-10-08" version="1" fragment="single">TTENNKNSAKTNIFGEKTNPSKFTFGFFDENIESKKEKTVEKNEFKSNFAKSLEKIENGKTGLFVFGNNSFGTLGLGPNGEADVKRPFLQKDSLRIHFVSVACGSFCMAAIDSDGDVWTWGPVSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS85</accession>
    <name>A0ABV2AS85_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004048</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003043">
        <property type="protein sequence ID" value="MES1922535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="24956" checksum="AA4D58BE060085B9" modified="2025-10-08" version="1" fragment="single">MIRHVNLKRVIGPRKKQRAKIEIFEELAVDSETKPENTISDLDDAIISGNYELAGFFKKNHNRHFVLKEKQLTWAKKKSKNFSGKILMNDLIGTGAYNKNKNDGLDLFTNVSERTIIFDSVSEKLKWLGLMRQNATNLKFYIRNVKECSEISLFKNGKFVNTGIVVTGNCIYTMNKAHLQEFVAASSSEIDFIVIKLKKMITNCYLLKNLNLLSSNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS96</accession>
    <name>A0ABV2AS96_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ycf1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003948</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002791">
        <property type="protein sequence ID" value="MES1922434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="251" mass="29957" checksum="F2198FD2E0001EE6" modified="2025-10-08" version="1" fragment="single">KKKFESHKFAITILKAPLKTQILTIQNFHSLLKWLLFICKGCDQLKSFVQKSLSQPLKLHQKLRISPLTRLERKLQIENQFKSDLRAVTEYFRPFYDKINNFVTAVAPFDEDFEKKAERFLLNEINAKKVNDYFIMRTTKTGEKIYAKIFSDTIKWCSHIPIQYKSLLYDENEIDFENSVLKTKKNLPKTSKLDLWIDYHFMIIGSKDLQRLYNDLTFQLITGNQFKVFWGRRFMKLYSKIISKYNHSIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASV8</accession>
    <name>A0ABV2ASV8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003996</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002913">
        <property type="protein sequence ID" value="MES1922478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="72" mass="8518" checksum="5AEFBB44942B1236" modified="2025-10-08" version="1">MAKLTNEEKKWRAESDAYTLMRANEIANDKDPDRKKMADEKLSELKEEKEKELNSLNDLTSRKKDGKYPWTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT23</accession>
    <name>A0ABV2AT23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004344</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003809">
        <property type="protein sequence ID" value="MES1922818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="17174" checksum="AF336C4A76C9CC80" modified="2025-10-08" version="1">MLSEKSLIKFYDSFYSRVLEKIVDLYSKRINGLRRIKEKEYSDESQESLKGREEVNQTIMTTFNDRQNLLKLIICRLAASSDFISSKDSDFLNNEIFKAIFGRLVMFLRKFREDIKRMEETLKKAYFDQNQSNPSTKAFKLIIAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB3</accession>
    <name>A0ABV2ATB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Barbed-end actin filament uncapping</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">LRRC16A</name>
        <name evidence="1" type="ORF">MHBO_004438</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004004">
        <property type="protein sequence ID" value="MES1922909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051279">
        <property type="entry name" value="PP1-Reg/Actin-Interact_Protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24112">
        <property type="entry name" value="LEUCINE-RICH REPEAT, ISOFORM F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="27060" checksum="888D4A7D48BAAA42" modified="2025-10-08" version="1" fragment="single">SITTIFSSLTKNPDASKGAALNLNLDLSDCAFENTQQPLIPEPIRFITELNLSKCSFKSKQLEQFLVQLENLRCLHTLNLSRCGKNYQGKKTVGECLAVLCHSLPSLQFLSLGSFCDNAKKESLSAFLESLGQNRSILRLDLTGCKLTDEDFAKLGEAISKNNTLRILEFGENKASLKGFTRFLEILNKSENVIGKLPKKDVKQFLKGRGKEEDKLKLKLAADESDNRFDNNIKLVVGESVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH5</accession>
    <name>A0ABV2ATH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004502</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004194">
        <property type="protein sequence ID" value="MES1922971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="142"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="32207" checksum="3601F949013815F6" modified="2025-10-08" version="1" fragment="single">MGELKRSRKEAERRKQQEQKERREQQEKEAEEREKQEEKEKEKRKQQEEKERRECEEANKKATELYEKQKLKEIKNKNRNREYQKSKKQKNKKEVTIYEREYSTIEDEKDGEARANTDKDYKTDLQQNLFSDKRILVPVSRSERSAKKGAYLDETSENEKLSEAAAIPESSYQESLGFPVQESIATESEYIENLDRPFNLTGRQKETSKSLICQETGGPSECHCANLSISQIDKQNRTEKKNFLTTASDEPDEVVSEYCYKLESREYRCIPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK0</accession>
    <name>A0ABV2ATK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">26S proteasome non-ATPase regulatory subunit 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PSMD3</name>
        <name evidence="2" type="ORF">MHBO_004458</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004068">
        <property type="protein sequence ID" value="MES1922929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000717">
        <property type="entry name" value="PCI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01399">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50250">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCI" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13560" checksum="DC6CD073DD420198" modified="2025-10-08" version="1">MIKNICKVYSKISLKEIANLMNLSNLNDAEFMISKAIAEKEVEGKIENGVFVALPNKSVYKTHFPIEKINEQVSDVVDLTEKIEKEQNFPFENFKVKKSFERKIELEKMVKSFNKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL0</accession>
    <name>A0ABV2ATL0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">mRNA capping enzyme adenylation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004542</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004339">
        <property type="protein sequence ID" value="MES1923008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.30">
        <property type="entry name" value="DNA ligase/mRNA capping enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001339">
        <property type="entry name" value="mRNA_cap_enzyme_adenylation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051029">
        <property type="entry name" value="mRNA_Capping_Enz/RNA_Phosphat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10367">
        <property type="entry name" value="MRNA-CAPPING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10367:SF17">
        <property type="entry name" value="MRNA-CAPPING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01331">
        <property type="entry name" value="mRNA_cap_enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56091">
        <property type="entry name" value="DNA ligase/mRNA capping enzyme, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="mRNA capping enzyme adenylation" evidence="1">
        <location>
            <begin position="1"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="22121" checksum="9C98CEA50B586112" modified="2025-10-08" version="1" fragment="single">LYINQNKTFLIDRSFEFFEIKSDFYNKLWKKGNTILDGELIFQQHKSKLITNSKNKNYQFLENKPIFLIFDIVQINGENVGNLLLNNRFVKIGEFNGNYRQFSRENHPLAILAKTFFKTKSIQTLFSMITFDSTNKLYIFNDKRRNVTNLNDGLVFTPENDDYLQRKKLLFKWKWPELNTFGSIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT1</accession>
    <name>A0ABV2ATT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4224 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004433</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003997">
        <property type="protein sequence ID" value="MES1922904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025319">
        <property type="entry name" value="DUF4224"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13986">
        <property type="entry name" value="DUF4224"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4224" evidence="1">
        <location>
            <begin position="6"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9347" checksum="8334124EC7AEAD5C" modified="2025-10-08" version="1">MDNTEFLTQVELVELTGCKQAGAQKRWLSDNDINFLVNTEKKPVVSRFYLRLKMAGAVPEEMRADKTELEHNFNFNRLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW8</accession>
    <name>A0ABV2ATW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004651</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004713">
        <property type="protein sequence ID" value="MES1923110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="52" mass="6126" checksum="C99C6F256C80F306" modified="2025-10-08" version="1" fragment="single">MDLNVRGNENSTWVENPVQRIGMVRGHFRSNGTYVQPYYRTEPDGVKWNNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY1</accession>
    <name>A0ABV2ATY1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004657</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004739">
        <property type="protein sequence ID" value="MES1923116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15542" checksum="9D63E0556C7942DC" modified="2025-10-08" version="1" fragment="single">PLESYLNPDAPGTNPQIKLLIKHDYFEPKKSPCYLAYLKEEEETDRTNKAFGIQEWDEKDPNITGGSYFLVAFIATLRGTAPNDGFVRIGLVNKGLTPSAPNKGYFLDVNGDPMVSEIQYKSGDKLGQVMISGIVNAKGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY3</accession>
    <name>A0ABV2ATY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dynamin-like GTPase that mediates homotypic ER fusion</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SEY1_2</name>
        <name evidence="3" type="ORF">MHBO_004656</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004735">
        <property type="protein sequence ID" value="MES1923115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046758">
        <property type="entry name" value="Sey1/RHD3-like_3HB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20428">
        <property type="entry name" value="Sey1_3HB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="Sey1/RHD3-like three-helix bundle" evidence="2">
        <location>
            <begin position="21"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15053" checksum="144DC8EC0E20031E" modified="2025-10-08" version="1">MLETFSVIKDGPQIGKYPVIEEDRKLLINKEKKKIILKDFQAMALSSLREAEIQKLSNKTNIPIWYYLLLIVLGFDKFLWFANNSYLLIFLIIGGFLWVNYGDSNIANLRFLAKDRLMSIFGSGNNETIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU05</accession>
    <name>A0ABV2AU05_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">OBG-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004673</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004804">
        <property type="protein sequence ID" value="MES1923131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.300">
        <property type="entry name" value="TGS-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023192">
        <property type="entry name" value="TGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23305">
        <property type="entry name" value="OBG GTPASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23305:SF18">
        <property type="entry name" value="OBG-TYPE G DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="2">
        <location>
            <begin position="1"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20044" checksum="7E351CE574A19B5C" modified="2025-10-08" version="1" fragment="single">ITDIAGLVKGASTGKGLGNEFLSHIYGVDGIFHVVRAFPSKTVEHVEGNIDPVRDLEIITNELRLKDASIVEKKINSMERVAASTNDSTVKDEFECYKKLLKILKNCDSLLSTKWTNNEIDLINALYLLTAKPVVFLVNVSAVSWQNKKNKWVNGIKEWVKKTHPNSPLIMFSAAFEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU17</accession>
    <name>A0ABV2AU17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004920">
        <property type="protein sequence ID" value="MES1923155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="10997" checksum="017314346563F287" modified="2025-10-08" version="1">MMTAMEEILEEETLDEELSYIEKSYLRYFGIKSKTKEQGGLGCSSGEEADYTVVILNEKRTKNPRVEGSSTGAITMRKTTGRNSTENSAFGQNKKKMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU28</accession>
    <name>A0ABV2AU28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004984">
        <property type="protein sequence ID" value="MES1923170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="13938" checksum="BA9EAB818B6CF0D6" modified="2025-10-08" version="1">MSKFIDDKTFVFEKYINSKRLKQNICVMFSLIIVLAFFLIALIIYMSITDLTDTSKLIGLIVSIILIIAAIIYLIYLIFKMPRKLPLNISLKYKKSINDDIGSSEEELLFINNDNSYASIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU56</accession>
    <name>A0ABV2AU56_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GrpE protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004457</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GrpE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004066">
        <property type="protein sequence ID" value="MES1922928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00446">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.22.10">
        <property type="entry name" value="Head domain of nucleotide exchange factor GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01151">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000740">
        <property type="entry name" value="GrpE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013805">
        <property type="entry name" value="GrpE_CC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009012">
        <property type="entry name" value="GrpE_head"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237">
        <property type="entry name" value="GRPE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237:SF23">
        <property type="entry name" value="GRPE PROTEIN HOMOLOG, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01025">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00773">
        <property type="entry name" value="GRPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58014">
        <property type="entry name" value="Coiled-coil domain of nucleotide exchange factor GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51064">
        <property type="entry name" value="Head domain of nucleotide exchange factor GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="38"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="45"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="232" mass="26504" checksum="F6ABDB484FDB3283" modified="2025-10-08" version="1">MNLFARKSNPLLKSNFAKLFIPTSLKINLKIRNCQRFSSTNETKNQQKEDKKQSNKKIEKSKKSEKSENFEKIAHERKKEIAKLKDQILRFAAELENTRKISQKEINKARNFSISKFALSLLNAHDNLQRALDVAHKNISEAKKHQNELGKAFVNLFDGIKMTEDALDKTFGDFGIKKIECEGAKIDPKFHDVLTTVKNAGKEDMTVAEVLQEGFTINERTLRAAQVVANKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU81</accession>
    <name>A0ABV2AU81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004729</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005030">
        <property type="protein sequence ID" value="MES1923184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10455" checksum="697876FC7A30A30D" modified="2025-10-08" version="1" fragment="single">MEENFDAKPKTTALENDGAEKNNAATLDENAKIVAFEKIKEHSQIWEFRKKLQNLNEKAFNKKTEKDSTIKKVNSFLRKLKSFNEHVESV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH9</accession>
    <name>A0ABV2AUH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004862</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005579">
        <property type="protein sequence ID" value="MES1923307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1490">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="9"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13037" checksum="E44A49066EEA1F89" modified="2025-10-08" version="1" fragment="single">MEDNCATELAALKADNHRLNTEIANANVEIGRLMSEIGIKEKSIASHQSRLDDLRGRSTIIEGQLRESNVQNASLIENNNVANAKLAKINELYEELKVVYDRDTRDLTDESRALQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK0</accession>
    <name>A0ABV2AUK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004856</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005546">
        <property type="protein sequence ID" value="MES1923304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="19404" checksum="5D14D3B00E784970" modified="2025-10-08" version="1">MEAFISNTDAICKNLLSKIGNGEPDSLRLAANYLCLGGESSNIPKAICDSLNSLFDKYKTSEFSQTGFEMFFDGLCKNLIKIFVYSDVETASITTLGEQFKVVDSMLGGSPEFLFPTPTHDSEAKYYAHLFVKILNEKNATVFPECYSENGIAKHCKDYLIPVKMTKAKLCGFTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUK5</accession>
    <name>A0ABV2AUK5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PIK-related kinase FAT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004922</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005812">
        <property type="protein sequence ID" value="MES1923358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003151">
        <property type="entry name" value="PIK-rel_kinase_FAT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02259">
        <property type="entry name" value="FAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PIK-related kinase FAT" evidence="1">
        <location>
            <begin position="7"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="19111" checksum="490CFAD9EFBDF48E" modified="2025-10-08" version="1" fragment="single">LRIIDSGSAFTRLREQIKICRTETEAALALINSTNLALFKREQISELFAFKGEILATTNKEESYVFFSSSQMVSFNNFRGWIKWAEFCENTNSNVHETQWIESALVCYLAALQVNSSKSKHLIARILWLVSHKKSINNHKKCVEIFGSYWEKIPVWVWIFWIPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP5</accession>
    <name>A0ABV2AUP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nrd1 complex RNA-binding subunit, variant 2</fullName>
            <ecNumber evidence="3">3.4.24.56</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">NRD1</name>
        <name evidence="3" type="ORF">MHBO_004734</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.56" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010005042">
        <property type="protein sequence ID" value="MES1923189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.830.10">
        <property type="entry name" value="Metalloenzyme, LuxS/M16 peptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050626">
        <property type="entry name" value="Peptidase_M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032632">
        <property type="entry name" value="Peptidase_M16_M"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690:SF18">
        <property type="entry name" value="INSULIN-DEGRADING ENZYME-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43690">
        <property type="entry name" value="NARDILYSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16187">
        <property type="entry name" value="Peptidase_M16_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="LuxS/MPP-like metallohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M16 middle/third" evidence="2">
        <location>
            <begin position="58"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14422" checksum="8EACF9058799E2A5" modified="2025-10-08" version="1" fragment="single">CSDIFIFYVKIKLTEKGKDNIEEVILLLYKYIDMLKKMTIKQWQKVYEEVKIVEENSFVYQSKQKPINYARDLSENIAIYDKTDILTGPHLLDQFDFNKIKAFLDLMEPENMLCFYSSKNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP6</accession>
    <name>A0ABV2AUP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004913</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005767">
        <property type="protein sequence ID" value="MES1923349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11948" checksum="DA248FBE8B443C03" modified="2025-10-08" version="1">MSIFCAQCLIAETSTYIPNGLLKRTLLYVFSMRALINSEVVQCMYWLNSESNALMGRFHSRPMPTSVAFLIRHYLHRVTLSMYVLVDYRTTSYSDHGCIGLTVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR5</accession>
    <name>A0ABV2AUR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004943</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005916">
        <property type="protein sequence ID" value="MES1923379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="63"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10841" checksum="76D6EC63168179BD" modified="2025-10-08" version="1">MTSEIQKNKSANIQNIQSKLISLRELLSARKHLLNVLGDTKEERPCYKRSKGGFKTFNAKDLLKITNEEVTQIEEEYLQLQTEYKKLLDSLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS1</accession>
    <name>A0ABV2AUS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004968</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006018">
        <property type="protein sequence ID" value="MES1923402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8194" checksum="8E7188CD40EDDD24" modified="2025-10-08" version="1" fragment="single">VILMETKFLRDGRKVAVICNINAKEFVVQEVFVNEDGVEKLSGDQFVAQNLRDEKLISYHEQQSINAEKRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW0</accession>
    <name>A0ABV2AUW0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycoside hydrolase 2 (Mannanase, beta-galactosidase)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">BMS1</name>
        <name evidence="2" type="ORF">MHBO_005015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006215">
        <property type="protein sequence ID" value="MES1923443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase AAA-type core" evidence="1">
        <location>
            <begin position="23"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7326" checksum="A6F42BD2FB3D5115" modified="2025-10-08" version="1" fragment="single">NLKELREKIAEFIPEKDLNCVNILLIGPPGTGKTSFYNSCITALSDERRVKDPFTVRSGGDCVTVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX9</accession>
    <name>A0ABV2AUX9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Nucleic acid binding</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ZNF84</name>
        <name evidence="7" type="ORF">MHBO_005041</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006318">
        <property type="protein sequence ID" value="MES1923466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379:SF121">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379">
        <property type="entry name" value="KRAB AND ZINC FINGER DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="28"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="57"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="85"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13416" checksum="957F178CCC01A011" modified="2025-10-08" version="1">MVVSDSRLKQFKMRRKPNALIDTMERVLPCPYCPKMFKRNAHVASHIRTHMLKKKMFKCSFCDATFSFMSGKRRHEKTHTGESIVHCEVCGKKFFRTHRLNIHRLKMHPEAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV46</accession>
    <name>A0ABV2AV46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005128</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006752">
        <property type="protein sequence ID" value="MES1923540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="72"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13212" checksum="79ED8F6BDA6E707A" modified="2025-10-08" version="1" fragment="single">FSCKNNDFNSLQILSRDNFEFKEEIIIGISPEIGYPPNLLSFFTDGHLLYLLSSEMVESEIDCRKMTNNEKNKNSHFVSLKDNNQKRKVQFPETSSGQKRSGSAVYDHIRNFEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV66</accession>
    <name>A0ABV2AV66_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006765">
        <property type="protein sequence ID" value="MES1923541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="90"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14304" checksum="EA3B05BE210F6EB9" modified="2025-10-08" version="1">MFKIRNLVKAAKVCNYTVFKHKKFCTAKIDQKVAKKQEKTPFAIKLGFFFAGGALMSIVGYYQLAVDLTGLSRQIHQRLNDLSSSVQSMADASAQEMEEINRRIEVLENLNKSTETEKLKERRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV68</accession>
    <name>A0ABV2AV68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005143</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006850">
        <property type="protein sequence ID" value="MES1923551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="8876" checksum="8631F16E00E4089F" modified="2025-10-08" version="1">MDREMLYDPNDLSCIIKSRQAEEYYDLAKSKFELQDAQVLPVINYTGGHTQDAVRDVFALSAMNSILQEAISYIENNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV69</accession>
    <name>A0ABV2AV69_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LNS2/PITP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005137</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006821">
        <property type="protein sequence ID" value="MES1923548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026058">
        <property type="entry name" value="LIPIN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013209">
        <property type="entry name" value="LNS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031315">
        <property type="entry name" value="LNS2/PITP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12181">
        <property type="entry name" value="LIPIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12181:SF12">
        <property type="entry name" value="PHOSPHATIDATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08235">
        <property type="entry name" value="LNS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00775">
        <property type="entry name" value="LNS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LNS2/PITP" evidence="2">
        <location>
            <begin position="66"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19307" checksum="A1D549F651B31227" modified="2025-10-08" version="1" fragment="single">PKTTQKNTKTKKRKHKKRSIRPTSDQIFSLNLRKGANIARFAVHSALQGTQIIEAAIYLWDEDARIVVSDIDGTITKSDMLGFILPNFGRSWEQPDVARLFRSVHENGYNIVYLTARLISLTEMTRRYLFGLDQSGGEQLPVGPILTFPMGFISAYRRDHISQPQVLRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA2</accession>
    <name>A0ABV2AVA2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Minichromosome maintenance protein 5</fullName>
            <ecNumber evidence="4">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MCM5_3</name>
        <name evidence="4" type="ORF">MHBO_004889</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010005649">
        <property type="protein sequence ID" value="MES1923332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033762">
        <property type="entry name" value="MCM_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF42">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17207">
        <property type="entry name" value="MCM_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00350">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM C-terminal AAA(+) ATPase" evidence="3">
        <location>
            <begin position="116"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18328" checksum="C92BD745735A1385" modified="2025-10-08" version="1" fragment="single">EIVPDECGFIDCQKLRLQELPEDVPTGEIPCHLSLSVDRSLVNVVTAGTRVRVIGIFSVFQPKPRFGKSKKSAPSSVSYLRVVGLEQLSEGMSLQKHPFSVAEEEEMIALSKDPKIYEKLAQSLAPKIYGHEDIKKAIVCLLFGGTKKILPSRSRIRGDINILLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA6</accession>
    <name>A0ABV2AVA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copine-9, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CPNE9</name>
        <name evidence="2" type="ORF">MHBO_004873</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005602">
        <property type="protein sequence ID" value="MES1923318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045052">
        <property type="entry name" value="Copine"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857:SF106">
        <property type="entry name" value="C2 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857">
        <property type="entry name" value="COPINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19141" checksum="9BE80CAA5C4D1A50" modified="2025-10-08" version="1" fragment="single">KMLKTCLRIKCSNLPCMDLLSKSDPFVVVSEKTEGAANKYRQLGHTEPIKNDNHPTFVKTVPVSYYQGVDKTLVFEIFDKDNNSNYLSQHDYFGKATMKLSQILNGGYSSPISDCRSKKHLTNMKNVTSLISVITEPFKHSDSSIEMQLIGRKLKKKDLFSSDPYFEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD7</accession>
    <name>A0ABV2AVD7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005231</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007260">
        <property type="protein sequence ID" value="MES1923623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="19031" checksum="1B5ED8FAADE53EA5" modified="2025-10-08" version="1" fragment="single">MKKIDWNNVNEAQDFQNPTVGGYVAKISYTKDEEIKEYLRIEWDFAEGEFAGNNRGTYERANFWPLAFIRSYKEKALPFFKSFKTAREESNRNYTFREDYLDDMTGKRVGIVLGEEEYEKKDGAVGKRLYVYQTSSVKSIKDGDFKVPDLKKLKNTLSAPLASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVK5</accession>
    <name>A0ABV2AVK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006133">
        <property type="protein sequence ID" value="MES1923422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.290">
        <property type="entry name" value="Spermadhesin, CUB domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035914">
        <property type="entry name" value="Sperma_CUB_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49854">
        <property type="entry name" value="Spermadhesin, CUB domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10639" checksum="AB6389E127AE826A" modified="2025-10-08" version="1" fragment="single">MEIYETVKYCIDFILGVYNSEVAVSSHTISKNVTLSESGKIYIKSPGSPFQNYKKNTIYIWTVTAPETTNEILIIMKDLDISYIPGHPCEDSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE26</accession>
    <name>A0ABV2AE26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000020</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="171"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="213"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="213"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1917985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="358" mass="42533" checksum="22AA17105B6992BB" modified="2025-10-08" version="1">MGKTLFCENQKIPSAKTNQFENFNENTVKISNIPNSLNFEQILQFFGQFGSIEDFYVCHNNHPFLNAIDESQNQNFAKNEILFKNDNQNLVEKEHIFLIKYKNSKDSKKVINFVNNSPPFYFNISPFDIEIDQNLTKFDQIKIDQEKIDNTENLSLIKFETYKNNLCHFRHTIYIRNLPQKYEDKDLIRIFSKFGQIKSVHIENGEFSNKRSFEFNNKKDRNNESPDEINENGEQKKDDGNVFKSENRKIGFVVFCEEEGAKKAVSEMERIARNSKNFKKKLFVSLWEPKCLRKQTIQKRAAKSCLKRLCGDYDFEFVEGDRFNWILDTPLRSNRYRIFVPILVQVFIFYCCRFIAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE79</accession>
    <name>A0ABV2AE79_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000062</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="59"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="88"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="124"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="164"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="164"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="210"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="231"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="246" mass="27860" checksum="08951E1A64F837C2" modified="2025-10-08" version="1">MNKANFYFGLINVQIDYLTGLKQSNNYSVFEVFSTTCDLRECPGIDKNGFGYGMFGTPIVLMVLVLIFSLVAVVISGMMVGGIRMNAIVLNIVIILELVFAVLLELFYLFGIYVFVFGEFKKFYLGYCFYVALAIIVLAIFSMLTNTFGYKQIRKFERENEPSLDEIESKDKSDDGKKSHEKSDRSDDGKKSHKKNDRSGDGKKSHKKNDRSGDETKDLEKNDRSDDDTKDLEKNDRSDNGVESGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEF7</accession>
    <name>A0ABV2AEF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000111</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="entry name" value="Alanine racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="PLP-binding barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13994" checksum="D21B2BEBF01303E9" modified="2025-10-08" version="1">MGVLQEKYVDFMHQLDDFVRKNEDVERPSVLAVSKRKSLADIENIHRLGQVYFGESFVQELVEKSRKVLLSKSLLGIAWNKMALHRPFAKQQVRAVAQHPPSGSNSDGGQCEVGRENQQNLFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEG4</accession>
    <name>A0ABV2AEG4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cyclin H</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000127</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000016">
        <property type="protein sequence ID" value="MES1918109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043198">
        <property type="entry name" value="Cyclin/Ssn8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10026">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028758">
        <property type="entry name" value="Cyclin, C/H/G types"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="271" mass="31181" checksum="E241BB4B3428B3FA" modified="2025-10-08" version="1">MADALAFGTQTNWILEKIDLAKLRERKQKEKLEKVLDKTKEEKVIFPTVKEISILLKAYEEQLWALCEHLNLPLIVKLNAITYFKRFYLRNSAIGTDIEMNLVTALTVANKTGEYWLSLDKIASTVSKSKTEILKNEIPFLEGIKYNLLVHHPHSSLEILLSKSRKNMENMDAFTEKAINFLTCCYKSDIIFLYKPTCLAVAAFFCSAKKVSVGLMDKCKKIVEDLAGKSQFEELVKASNQIIEYFENENVADIKNLKRIRKKLSKINKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEM8</accession>
    <name>A0ABV2AEM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="202"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="202"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="214"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="251" mass="30165" checksum="0D3D4918E983FFD3" modified="2025-10-08" version="1">MSETVLRQSNDIEAQGASIKSSKQTLNDLQTKIENDKKVIKKDIETILRFKEERNILMELISDIRIQIENSNKNIHKNNEIKETLNLEMQIIKRNLEKREYDSNLQEKTLSKLRNQILVVANEIGKAKQRNFDNAERRKFLKQKKIEIEPILNKIEMSIKEIQQKLYKIDFRKNKISKALKRLESIEELLESLQNEFNKYAEETKNKNNTNREKKTKYPKKKRRRFQKNKRSPRNLYSNFKRRSSEQNRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER8</accession>
    <name>A0ABV2AER8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_000194</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045103">
        <property type="entry name" value="RNF5/RNF185-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12313">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 11" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="13">
        <location>
            <begin position="35"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="87"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="87"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1918183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16448" checksum="EFBD01E9740CEFDC" modified="2025-10-08" version="1">MDSEIKNNDEKSISDTSVEKTKENERKQKKSLFDCFICFEEAAEPVTTLCGHLFCWSCIHTWIANKNTCPVCKASVTEENIIPLYDRGRASDKTEATPKRPKPKRIEPPQQRGTNNPFNPFGLQNVQTNGVSFSFGVFPFVLSASI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF67</accession>
    <name>A0ABV2AF67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000015">
        <property type="protein sequence ID" value="MES1918099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="261" mass="29967" checksum="10B04C10D5628B03" modified="2025-10-08" version="1">MTVCNIPPRIEKLDYSAENCISTDKKFYGKCLLRLNSPYAYQLNKSFVTHKLLFKCEEGKTKHREFSIMKTCDLPKISIPGTMNFSLCNLSKSGSRFWGRCLVKPYNGYNMSSVDLDILCDKNGATIPDKIEVQRETNHFCILPEINNGQYKIQVPVKINDIVVYRCDFLYTSHVGKRSARLNCSDFGLETSPECRLSIKMMILVFFLPVILLAVLIFIVILFLYLRRMLCFRRRGIINETSIESVKSSSKISSNFVIGDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF87</accession>
    <name>A0ABV2AF87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CAAX prenyl protease 1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000329</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000046">
        <property type="protein sequence ID" value="MES1918350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032456">
        <property type="entry name" value="Peptidase_M48_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10120">
        <property type="entry name" value="CAAX PRENYL PROTEASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16491">
        <property type="entry name" value="Peptidase_M48_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="CAAX prenyl protease 1 N-terminal" evidence="2">
        <location>
            <begin position="28"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="27720" checksum="10A84FD9B1219226" modified="2025-10-08" version="1" fragment="single">MDYYAMAIFLTTIMFVLEIYIQWRQNSVHKIKKPPAHLQGYVTQEKFSTTQNYNLDKSNFRIAKIFFEFLTSIYFFRNVHRFYLASKELAFSLRSEDSIFHSHGLLTAAILAASLIVVLQVIDIPFDIYYNFILEEAHGFNKMTVLLYVTDSVKTLFLKLFIGVPLLLAFLFIVEFMGPSFPIIAWAFMVIVKVVLMLLYPYLIQPCFNRISILQEGKLKLGIESLAEAVEYPMKKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFK9</accession>
    <name>A0ABV2AFK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="33"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8390" checksum="D647DF1C234FD171" modified="2025-10-08" version="1">MVAVLFMVGKNLERPDVVDFLLDLGSCTSKPSVTKSIQSTTPRPVRRCVSTTADSATESKTNWSTPISRRSRCWW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFN9</accession>
    <name>A0ABV2AFN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DNA replication licensing factor MCM6</fullName>
            <ecNumber evidence="9">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">MCM6_1</name>
        <name evidence="12" type="ORF">MHBO_000266</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14 15">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the MCM2-7 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the MCM family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000036">
        <property type="protein sequence ID" value="MES1918279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1640.10">
        <property type="entry name" value="mini-chromosome maintenance (MCM) complex, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008049">
        <property type="entry name" value="MCM6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018525">
        <property type="entry name" value="MCM_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027925">
        <property type="entry name" value="MCM_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033762">
        <property type="entry name" value="MCM_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF43">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14551">
        <property type="entry name" value="MCM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17207">
        <property type="entry name" value="MCM_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01657">
        <property type="entry name" value="MCMFAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01662">
        <property type="entry name" value="MCMPROTEIN6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00350">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00847">
        <property type="entry name" value="MCM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 9" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 9 12" id="KW-0347">Helicase</keyword>
    <keyword evidence="4 9 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM C-terminal AAA(+) ATPase" evidence="11">
        <location>
            <begin position="384"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU368064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="531" mass="57930" checksum="CC9AB102BE2652BF" modified="2025-10-08" version="1">MADPNSSSQNTSTQNQAASQLDPTQQPANSEIVITGKKRKRRQAVSRVVDQVAEQVKREFFQFLDSFSSGESEETAFFVERAAAMAQNMTTTFEVSIEDLMMYNQELAVALIEEYSRFEPVVVEAVRDFVRKHFPAHLRMDDSEKEKTLFVSFTGIASVRRIRGLATKQLGQLISITGTVTRTSEVCPELLLGGFTCKQCAAILSNVEQQYVYTEPTTCSNSNCDNRTSWALEMTESFFTDWQRVRLQENADEIPPGSVPRHIDAILRNEQVEKVKPGDKCVFTGALVVVPDIGQIRGGVEASRAGNRKPDPNYQGVLGLKQLGVRALSYKLAFVANNVEPSTTKLGAPRGEQSGGGSARESVLEGLSAEEKHELLAMSETPNIYERLAASIAPDVFGHDEVKKGVLLMLLGGVNKTTFDGIKLRGDVNVCIVGDPSTAKSQFLKFVCSFLPRSIYTSGKASSAAGLTASVAKDPETGEFGIEAGALMLADNGTCCIDEFDKMDPRDQAAIHEAMEQQTISITKAGISVCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ5</accession>
    <name>A0ABV2AFQ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Signal recognition particle 19 kDa protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000104</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000013">
        <property type="protein sequence ID" value="MES1918082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.56.30">
        <property type="entry name" value="Signal recognition particle, SRP19-like subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002778">
        <property type="entry name" value="Signal_recog_particle_SRP19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036521">
        <property type="entry name" value="SRP19-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17453">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17453:SF0">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01922">
        <property type="entry name" value="SRP19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69695">
        <property type="entry name" value="SRP19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0733">Signal recognition particle</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="129" mass="15374" checksum="15A8EF21B14F59A5" modified="2025-10-08" version="1">MEDENSKKWNCIYLPYLDSRKKISEGRKVALKYCVPDVRTSEISTALKQLKFEHKVEKKSYCRDFLSVGRIRVELKRDGDLIDETIKNRRQLLIEIGKLLPNLEIYKKRLEMEKNKSTKKTKGKKKRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR9</accession>
    <name>A0ABV2AFR9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000118</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15069" checksum="3CF82C263CA400DD" modified="2025-10-08" version="1">MGATSTVEHDNFMFFGYEAKVTICTKIREFLFQNRDQKCLVFEEGPVKPFEQKVYDVHQRCKGNEAVSKEKSYLVILLSVACVLIVVLTILLILFYLRRRRNRRKKNQINQILFMMRNKNFEQISIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFT2</accession>
    <name>A0ABV2AFT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000076">
        <property type="protein sequence ID" value="MES1918522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="80"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="24450" checksum="5E5B96D33199BE45" modified="2025-10-08" version="1">MTDVELFGRSKPYSPQLQQYGWKSNYPDLFNEIQPIEHFVEFANFEQRIFTDLFAKINQQEENTKKMGEKVPIALAESPLHKLIEKCKQVDEKLRELTKQYKEDSKNFARENIFPSIETTSPIVSEYLSKRDRFTNAYDKVYGRADYTPQTNIGTQNYGANQNQMATNFGAQNNMGNNLQPSLEEELRNAKFDFENCIGPIKHKIRNLCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG53</accession>
    <name>A0ABV2AG53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Beta-catenin-like protein 1, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">CTNNBL1</name>
        <name evidence="7" type="ORF">MHBO_000340</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000048">
        <property type="protein sequence ID" value="MES1918368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039678">
        <property type="entry name" value="CTNNBL1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013180">
        <property type="entry name" value="CTNNBL1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14978:SF0">
        <property type="entry name" value="BETA-CATENIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14978">
        <property type="entry name" value="BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08216">
        <property type="entry name" value="CTNNBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01156">
        <property type="entry name" value="DUF1716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Beta-catenin-like protein 1 N-terminal" evidence="6">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20651" checksum="498E346462B246AB" modified="2025-10-08" version="1">MQTLEKAQLKNLNMRSKYSDNPNKFMQSELDLSDAIKAIKDVAVAPKLYENLVQNNLPKIVSELLSHENTDIVIETINLLKELADPTTFFEKSPILDFLKALSKRNVFNLVSDNLERLSENNEDSEGLFDALSIFESIMETDQRFFMETFIKSKLGKNRPEKHFVNFVILAMEPNSSPFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR1</accession>
    <name>A0ABV2AGR1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Citrate synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the citrate synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000146">
        <property type="protein sequence ID" value="MES1918875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="entry name" value="Citrate Synthase, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019810">
        <property type="entry name" value="Citrate_synthase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF007128">
        <property type="entry name" value="PRK09569.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739">
        <property type="entry name" value="CITRATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739:SF8">
        <property type="entry name" value="CITRATE SYNTHASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00143">
        <property type="entry name" value="CITRTSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="Citrate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00480">
        <property type="entry name" value="CITRATE_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="288" mass="32541" checksum="4E340D845AEC9EA2" modified="2025-10-08" version="1">MSPYSKFRKAYFERAPKTDLWYYAFEDAMDMIARTPLIAARIYRNLYHGGKQIENVKSEDISGNFARLLGFDKFEVDELMRLYMTIHSDHEGGNVSSHTAHLVGSAMSDPYLAFSASINGLAGPLHGLANQEVLTFLKSLDKKFPGEELTIKNLSKEIKATLDKGQLVPGFGHAVLRVTDPRYTLQSEFARIYLDKNDRLYKIVKILNELVPSILKGFKKIQNPYNNVDGHSGTILNYFGLTQSNFYTVLFAVSRCIGVNCNLIISRIYGLPIERPKSATTKWIAENI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU7</accession>
    <name>A0ABV2AGU7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000796</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000152">
        <property type="protein sequence ID" value="MES1918903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="101"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13789" checksum="4BBFA817D9643644" modified="2025-10-08" version="1">MTEGNSSLPSNFFDGPNIKINKNAKPKKKGPEEAKDLITAELLKIEQMASDYSQKVEQQKIADEEEDRHQKSFNELKKQLEAFRKNLKINKKIDKKTKNAIQKKKPKFDWRKRRLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGZ8</accession>
    <name>A0ABV2AGZ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DENR N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000834</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000163">
        <property type="protein sequence ID" value="MES1918950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048517">
        <property type="entry name" value="DENR_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21023">
        <property type="entry name" value="DENR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DENR N-terminal" evidence="1">
        <location>
            <begin position="46"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20668" checksum="0B086E21E261F572" modified="2025-10-08" version="1">MIKLLLKKSILNDNHTKNRVCKIFARNFADFPGIRDDKGNLLEPNFYCKVCTLPFEYCKYSVNLNKCVDSRENYRIFLERINFNQKVATQITNLCKLPFFSVKSVLALLRKNLQCNSVYKKQIYVMFRDEKKISFVLNEHLGIPKENIFVVENNKHKPAFNKDGVFAYKDDFVYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH33</accession>
    <name>A0ABV2AH33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000707</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000129">
        <property type="protein sequence ID" value="MES1918804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9123" checksum="A1E49676152441D7" modified="2025-10-08" version="1">MEGMKVTFLAVTFFKAFWSEVKTLFKESRGTTFPAGLPRWDIRTTDLAPFSKACFMVGIVPTILLSSWTSRFLPKGTLLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH54</accession>
    <name>A0ABV2AH54_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000173">
        <property type="protein sequence ID" value="MES1918988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="21126" checksum="DA4FDE6CF733FD63" modified="2025-10-08" version="1" fragment="single">MIENYISEHKDICDKAKNQIGKAEGDENFLITKSKRKEFKKLYLQSKTLLKVIDFEFESLKENEREQHKKQVEECKKNYEGIYALWKYVKNKKEFETKNEKKYLDNENSEKDKLNKLERIHSDLLDIEHRGVSSFEGLRSNTDLIRKINFKTNALNLITGRATKLMNTISCREGILSSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH68</accession>
    <name>A0ABV2AH68_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000886</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000178">
        <property type="protein sequence ID" value="MES1919007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11939" checksum="0DFCAC02286B8CD8" modified="2025-10-08" version="1">MDTNKRSLLHPRVSVLNAKNLTAPKTNNVLEQKNHLKTKLAIDTKNLSKKTKRTRLTKIASKSKIIKRGLFNLSTSRLREVIKSIDQEKKELEGFSIFCIFGKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI6</accession>
    <name>A0ABV2AHI6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000204">
        <property type="protein sequence ID" value="MES1919125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.272.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050238">
        <property type="entry name" value="DNA_Rep/Repair_Clamp_Loader"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669">
        <property type="entry name" value="REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669:SF1">
        <property type="entry name" value="REPLICATION FACTOR C SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21960">
        <property type="entry name" value="RCF1-5-like_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22534">
        <property type="entry name" value="RFC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="post-AAA+ oligomerization domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20181" checksum="7422322714C7F117" modified="2025-10-08" version="1" fragment="single">CLRVPAPDGNAIKRVLKDICTKEEISVPESFGSKRQVKLEKVVAESEGNVRRAILALELSMANGSDEIAKLAWKKFIGEVALLICEEQSSKRLLVVRSKLYELLNRLIPPGVILKELVLELMEKCDFELQREVVRFAAFHELRMAKGSKPIYHLEAFVAKFMSLYQKWSQDYFEDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK1</accession>
    <name>A0ABV2AHK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001023</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000213">
        <property type="protein sequence ID" value="MES1919159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7773" checksum="60FD79C244676C68" modified="2025-10-08" version="1">MDSFRKFACCERSPMAGITSGHFWRQDVGSREHIPSRQKLRARRGRSNGLTNAEVLFQDFDNFKVIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN0</accession>
    <name>A0ABV2AHN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001053</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000221">
        <property type="protein sequence ID" value="MES1919190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="13809" checksum="CAFA92D536495345" modified="2025-10-08" version="1">MYYPNYSCCPSSTIVIVVSPCGSPQFQQYGHDHYSNGQYGGHGHYGPGQYGYGYGPYHPYSTCTTTTEPPTANPMSWVTLVNTTTPVPAVVPSVDESVSKKPTEIVATIAPTFTSPPNINSKKWLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP9</accession>
    <name>A0ABV2AHP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001064</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000224">
        <property type="protein sequence ID" value="MES1919201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="26149" checksum="4CFAE0BCE3078560" modified="2025-10-08" version="1">MKKFYENEISRQNNHSIALKNLNDEKMALFYEKIDAEKLNILNLYKFLFLQLKISYRFEEKGKMIEKKNDEINLLLSQNNGNIDYLKEMNYYQSQFDLLKEIQTGRNDLVKNLTAISPISYPNTTILKTKKSAFFKRKMSTFQTENSPGLIKPSFVFESEKILSKIPIPDLSALSFLVISDSILWIIKSFRVIETYIKYKKDFLIKAIFFNFVDLSTIKIDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS5</accession>
    <name>A0ABV2AHS5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">2'-phosphotransferase</fullName>
            <ecNumber evidence="3">2.7.1.160</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001094</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the last step of tRNA splicing, the transfer of the splice junction 2'-phosphate from ligated tRNA to NAD to produce ADP-ribose 1''-2'' cyclic phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2'-phospho-[ligated tRNA] + NAD(+) = mature tRNA + ADP-alpha-D-ribose 1'',2''-cyclic phosphate + nicotinamide</text>
            <dbReference type="Rhea" id="RHEA:23324"/>
            <dbReference type="Rhea" id="RHEA-COMP:11106"/>
            <dbReference type="Rhea" id="RHEA-COMP:11107"/>
            <dbReference type="ChEBI" id="CHEBI:17154"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:76596"/>
            <dbReference type="ChEBI" id="CHEBI:82883"/>
            <dbReference type="ChEBI" id="CHEBI:85027"/>
            <dbReference type="EC" id="2.7.1.160"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the KptA/TPT1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.160" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000234">
        <property type="protein sequence ID" value="MES1919235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.170.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.970">
        <property type="entry name" value="RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002745">
        <property type="entry name" value="Ptrans_KptA/Tpt1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042081">
        <property type="entry name" value="RNA_2'-PTrans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042080">
        <property type="entry name" value="RNA_2'-PTrans_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12684">
        <property type="entry name" value="PUTATIVE PHOSPHOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12684:SF2">
        <property type="entry name" value="TRNA 2'-PHOSPHOTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01885">
        <property type="entry name" value="PTS_2-RNA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56399">
        <property type="entry name" value="ADP-ribosylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20400" checksum="7B5787AC1B975007" modified="2025-10-08" version="1" fragment="single">MHSFYTVRNGRTFNRENPNEALSRALVRVLRHEALRLRLPLRKDGFVPLNKVMQVGRVRRLNPTIPSIIEVVKNCPKQRLSLKSIDGVLMIRANQAHTIKNIATEKLLTPIQNCKAFPVVVHGTYYTPWQTIKSQGLSRMERNHIHFTKGDNLNETKSGFRSRSEVLIYLDLQKAMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHZ7</accession>
    <name>A0ABV2AHZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001164</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000253">
        <property type="protein sequence ID" value="MES1919309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="5883" checksum="043EB69C69A6EAE0" modified="2025-10-08" version="1">MGTHSLATRGSIWCATYQSVSSNNCCPVFLAFVIETFSSLETAFFAIEARFGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI92</accession>
    <name>A0ABV2AI92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000168">
        <property type="protein sequence ID" value="MES1918967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19472" checksum="E2E469C91485D723" modified="2025-10-08" version="1">MTDSDSTANLKNENSTLPTKNIERLNRQNILRTEEDREEKEMIEHCERQMVQIKGNLVVLRRKMEEKIRLRRLMNENHATLQLLIKYQKELNEPLGKNIRSRVEDGGLKFSGGVVVPVPVHFIEAQTLLLQEQVAVQSANLSKSQRILRNQMELFRQFQLLQQQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB9</accession>
    <name>A0ABV2AIB9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Homologous-pairing protein 2 winged helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001047</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HOP2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000220">
        <property type="protein sequence ID" value="MES1919184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010776">
        <property type="entry name" value="Hop2_WH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15938:SF0">
        <property type="entry name" value="HOMOLOGOUS-PAIRING PROTEIN 2 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15938">
        <property type="entry name" value="TBP-1 INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07106">
        <property type="entry name" value="WHD_TBPIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-0469">Meiosis</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Homologous-pairing protein 2 winged helix" evidence="8">
        <location>
            <begin position="83"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="163"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="67"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="32507" checksum="50232A7DA8BA0887" modified="2025-10-08" version="1">MEILEISDTNESSGSDFVPDSPKIVSTTKSKRKDFKKDRELKELKQQLNKDSKNSSLTKVEPSTNKAAKKVTKTKKQNKSKIDSEKKILEFAEKTNVPFSHTNAADANKGLMPKTKMPIFLEEMAKKGLLEMKTFNKAKIFYLPQKQFEQITNEDIVQIIRKADDNQRSLSSLKSTIEKLKNQIQTLKSEMRDLEIEVALKKSNELIRNKKELIKNLTEINLNNKKTMSSKDIANLKNKILKCEKLLINRKKLAIRIAETVMGEETTKSTKQFLINLGCEVDDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIM8</accession>
    <name>A0ABV2AIM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001348</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000320">
        <property type="protein sequence ID" value="MES1919535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14876" checksum="18D0F4CA0D1F3ABD" modified="2025-10-08" version="1">MNRNFYNNPNIGRDAYPRARLLKKSIRGTGSYMTQLRQNGEQFSLTTFSDQVNKLKILMDVLDKSKMAVKNKKSQFEEAVKRVLFYWNVETDGNRVLLFRLLMLFFKYNKTFLNPRWLTPLLDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP0</accession>
    <name>A0ABV2AIP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000318">
        <property type="protein sequence ID" value="MES1919530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13925" checksum="F9B7082599630D10" modified="2025-10-08" version="1">MTSDVNHNNAFLDKLFGYDCNKSFGNMSKNSFEKQYNHNEAKSKRIFNRDAQNVVPVPKPVTENSKNIPNLKNFMHNRHLEKNFALNPSMGINPSENLLRPENKEFRDLYLKRYKFLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV1</accession>
    <name>A0ABV2AIV1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Palmitoyltransferase</fullName>
            <ecNumber evidence="10">2.3.1.225</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_005293</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="10">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000341">
        <property type="protein sequence ID" value="MES1919615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039859">
        <property type="entry name" value="PFA4/ZDH16/20/ERF2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883:SF43">
        <property type="entry name" value="PALMITOYLTRANSFERASE APP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883">
        <property type="entry name" value="ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0564">Palmitate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="51"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="140"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="11">
        <location>
            <begin position="93"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22698" checksum="481AA151AD2EC64F" modified="2025-10-08" version="1">MKILRSHGKVKIFCNCIFIGPDFLLLILTDILFLGPSILFVIFIFGKNGVILSTISIIFIFLITFLIHCTAFSDPGFLLKQKRKHRKTKKSKNGYKFCKTCKIVRPPRSKHCRYCDNCVLLFDHHCPWLGTCVALRNYRIFFILVSVSNFFAFYVFVQSVVFLSSKTVLNKKIDFFDVIRTEPIIYPFITKLAEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ11</accession>
    <name>A0ABV2AJ11_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Proteasome subunit alpha type-3</fullName>
            <ecNumber evidence="1">3.4.25.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">PSMA3_2</name>
        <name evidence="1" type="ORF">MHBO_001445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000356">
        <property type="protein sequence ID" value="MES1919650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0647">Proteasome</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7530" checksum="18B1550F999495EB" modified="2025-10-08" version="1">MFDLIKKRVHKLHEGSSGRKLSLEMSWVGEETGHRHERVPKSLFDAAMRYGAEAKRRAEMESDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ60</accession>
    <name>A0ABV2AJ60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001477</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000368">
        <property type="protein sequence ID" value="MES1919693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1112">
        <property type="entry name" value="COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="20256" checksum="1989607A03AD9F7B" modified="2025-10-08" version="1">MRDYNYDISDSDKYRHYHKRNYRHYGGDGCKFHTVKIPLPPSGCPGCPGSPGCPGRPGCPGKSICGPCGPRGPCGLCGKPGKPGCPGPCGMRGPCGPKGSKGCPGCPGKPGMPGCPGAPGPCGPPGPPGCSGDSGKHYDDDYELDYKNEAHCDNWDNWNNNNNNCYGPRKNYGYGNYYWPGQNCGPYRWM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ83</accession>
    <name>A0ABV2AJ83_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Endonuclease/exonuclease/phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001507</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000381">
        <property type="protein sequence ID" value="MES1919727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="61" mass="7157" checksum="B1000DA27E5CB0A4" modified="2025-10-08" version="1">MSMGIPSWSNRNDINLLDNLNYENLILAGDFNKRPENTRNSKKVNPNKRRADNICCFENRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA3</accession>
    <name>A0ABV2AJA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001521</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000386">
        <property type="protein sequence ID" value="MES1919744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="490" mass="58439" checksum="A9405D7B58E86040" modified="2025-10-08" version="1" fragment="single">DFLKKATKKFFKDRSIILKILCCGLKKIRKSKNEKFCNKIIETKIPETILAFLERHLYKEQPPDLNFHIRKEIKICFEMLFFVAETINLTENLTEKTIKLVATKPQIKLNFEELDIFYVYCFALTTRVFTKIDKFEKNDFSKLKICSETEQILKNSRYNEKMLKFSLSWIKFFIQNETAEFSQILEDIFDYFSQHNFNFAKTSFWNSKFLRFDLFSHFLFNLFKVYPIEKAIANYENNPKMLNFTIQAIFQNKKFAKKLLKSPFLDKILLLESKIFTEKGKFGNAKIRKDLGSGYLLMLSSLIKIDKTSKTVENNKINQKLIRKNFEAIMQKSIKFRKAKFYGKNSISTNFLNLSPFDKFDQFNNQKMVKILAENDENQIFCYLKLLKYNLKFGDSDKLEIDSFDLFYTLNEFLKFDDSLSTKKLAIEIQSEIIKTTKIIENLNKTENDLFFQNMQNLDHKNLFNSFCKIFVVVLQKYDQNFNKNFIFWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJD8</accession>
    <name>A0ABV2AJD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phosphoacetylglucosamine Mutase</fullName>
            <ecNumber evidence="4">5.4.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">PCM1</name>
        <name evidence="4" type="ORF">MHBO_001555</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.3" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000400">
        <property type="protein sequence ID" value="MES1919787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004610">
        <property type="term" value="F:phosphoacetylglucosamine mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.120.10">
        <property type="entry name" value="Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.50">
        <property type="entry name" value="Alpha-D-phosphohexomutase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016066">
        <property type="entry name" value="A-D-PHexomutase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049022">
        <property type="entry name" value="AMG1_III"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45955">
        <property type="entry name" value="PHOSPHOACETYLGLUCOSAMINE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45955:SF1">
        <property type="entry name" value="PHOSPHOACETYLGLUCOSAMINE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21404">
        <property type="entry name" value="AMG1_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="Phosphoglucomutase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="Phosphoglucomutase, first 3 domains"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00710">
        <property type="entry name" value="PGM_PMM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha-D-phosphohexomutase alpha/beta/alpha" evidence="2">
        <location>
            <begin position="57"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphoacetylglucosamine mutase AMG1" evidence="3">
        <location>
            <begin position="322"/>
            <end position="463"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF21404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="541" mass="60701" checksum="92B16E669143C4B4" modified="2025-10-08" version="1">MNLERWKSILIEKKDQIEQTLNRHRLFDVNYGTSGFRAKSIFLDKIVLKTTLFQFHHSVIANNKAVGLMITASHNPAEDNGIKLSDPFGFPLKESLEMAVAEFCSSKNDRQIIKLLTEKQIVTSLKSDEPVSKSGEKPVLFIGRDSRDHSDHFSSLIAKFVNIFGDQIAFKNFGYTSSPQLFGLVGYFNLKNTRISDFSPEIYLDNICHFFTKLSKTVKALLQSNYDDSFLKSISVDCSNGIGSLLLNYIDNKICQSGIFKINCFNSFREGTINKNCGAEFLRKKMAPTNSKFDVLLASLDGDADRILFYKLSSSNELILLNGDRILVLFVKFLKLLVSTAKNFFDENNFTFKAVITAYTNGNCVRYLHSIGVETALSATGVKNLHPLAAGADIGVYFETNGHGTVLFSDRLISQIEKKLEKSAKNEPEGLALQSILLLQKLANQNYADAVGTLMAAQIIFNAMRLKPEAVLGLYENLPSREMAIKVKDNKLIKRISKDESRILDPEELQKKIDFVVSKYKGGRCFVRPSGTEVGNFIFRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJV5</accession>
    <name>A0ABV2AJV5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Kri1-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001709</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the KRI1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000464">
        <property type="protein sequence ID" value="MES1919971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018034">
        <property type="entry name" value="Kri1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024626">
        <property type="entry name" value="Kri1-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14490:SF5">
        <property type="entry name" value="PROTEIN KRI1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14490">
        <property type="entry name" value="ZINC FINGER, ZZ TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05178">
        <property type="entry name" value="Kri1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12936">
        <property type="entry name" value="Kri1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kri1-like C-terminal" evidence="4">
        <location>
            <begin position="356"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="73"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="119"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="196"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="231"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="341"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="82"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="125"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="210"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="238"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="254"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="470" mass="55720" checksum="50F0FB138AB8B636" modified="2025-10-08" version="1">MAKKIKINKEYEKKFNEKRQKNEISHKNSILQQSKYDSETSESEDENAKLLTPELDSKLNKLIKMIRKDHPKLKSIENSYFAHEKRENHNDDKQKISRERTKNQFEKKQSVSQLIAIQLDRDSQAPDQKSASISSQKLKEKSVKKFLKAAKKEFKSDSEESGDFFTEAKNHSKETDFLDGFFESRFWSRNSDAEDIPKFKSLGNESQPDVSDDEDELDRQDEFEKSYNFRFEEPGGTSLKTFSRNQVDSVRNKESRRKAQRKSRRERKERELNVRRKEVERLKKIRDDQIKERLEQIKEIAGVDQIDFTPSDLEEAYDGNKFEQKMSDIFNKAFSNISEVAKNDQENEKRIEEKLKEIESKLNSKNKLDFEDIISGGLKTRFKYVNVRPKNYGLSTEQILNSDDKKLTENISIKFMAPYRNDIEGEKWSQWKHKRNKDDNDNKFARTESFFVTLEILRRENKTKKSKFQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJY7</accession>
    <name>A0ABV2AJY7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">H(+)-exporting diphosphatase</fullName>
            <ecNumber evidence="2">7.1.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001689</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.3.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000453">
        <property type="protein sequence ID" value="MES1919947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004131">
        <property type="entry name" value="PPase-energised_H-pump"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31998">
        <property type="entry name" value="K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03030">
        <property type="entry name" value="H_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="43"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="17295" checksum="C6664027DADB38F0" modified="2025-10-08" version="1" fragment="single">YAAGQMVLEVRRQFQNGKILSGEEEPDYDKCIKVATEASLGETIFPLLLILSSVVVGCVLGERAITGYVFAAQLSAITLGIASNNMGGAWDNSKKYIESGALGEGKGKNTDVHYAAVVGDTVGDPMKDTSGPALNTLIKIMAISILVFAGIFPREPIFKRLIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK11</accession>
    <name>A0ABV2AK11_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">FeS cluster biogenesis domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001736</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; iron-sulfur cluster biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HesB/IscA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000476">
        <property type="protein sequence ID" value="MES1920006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="entry name" value="HesB-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="ATAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00049">
        <property type="entry name" value="iron-sulfur cluster assembly accessory protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43011">
        <property type="entry name" value="IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43011:SF1">
        <property type="entry name" value="IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="HesB-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="139" mass="15687" checksum="AC07C24CB16EB38B" modified="2025-10-08" version="1">MNILSKSTRKAFKNKITINNFVTKKTKILKITQNCAEQLRKINEKYKNGHKRMLRVSVEPGGCSDLKYDFQIVTKTAKNDFVFVLNDQKVIADSISLDFLDEATVDFKEEMVGSTFEISQNPNSSGSCGCNSSFSPKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK30</accession>
    <name>A0ABV2AK30_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Microtubule integrity protein mal3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">BIM1</name>
        <name evidence="13" type="ORF">MHBO_001513</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MAPRE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000383">
        <property type="protein sequence ID" value="MES1919733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.10">
        <property type="entry name" value="Calponin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001715">
        <property type="entry name" value="CH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036872">
        <property type="entry name" value="CH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004953">
        <property type="entry name" value="EB1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036133">
        <property type="entry name" value="EB1_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027328">
        <property type="entry name" value="MAPRE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10623">
        <property type="entry name" value="MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03271">
        <property type="entry name" value="EB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47576">
        <property type="entry name" value="Calponin-homology domain, CH-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140612">
        <property type="entry name" value="EB1 dimerisation domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50021">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51230">
        <property type="entry name" value="EB1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="5 9" id="KW-0493">Microtubule</keyword>
    <keyword evidence="6" id="KW-0498">Mitosis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calponin-homology (CH)" evidence="11">
        <location>
            <begin position="15"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="EB1 C-terminal" evidence="12">
        <location>
            <begin position="188"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="164"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="275"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="282"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="331" mass="38583" checksum="F6299467CC3C1B38" modified="2025-10-08" version="1">MSTENFGMMNEEAYFVSRLKLINWINDLLELEIKNIEDCATGAIYCQVVDSVFCNQNIVSMKKLDFSAKYSHEFVKNYKMLQEAFKKVGLSKTVPVERLIRCKYQDNLEFLQWLYQWYQRNTGTEGAIEYDAYNRRCLAKGGKSYKYNKSANFDNTKVVENTKKQKRSIKKPFQQQQTQQQSKNAMQKLKETEKEKQNLETQISNLTTIAKEIEEERDFYFQKAYQIENLCLGRNQSGSINPFSVGSSAEKLSKQILDVLYKSNKENAVDQSNLNNMNENNKMGENDKIEKNDKMVEKKKPKSFAESVTKMDKDLGIENSLIGDYSMKDEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK73</accession>
    <name>A0ABV2AK73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001793</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000502">
        <property type="protein sequence ID" value="MES1920074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17333" checksum="2121E92CACDDFC6A" modified="2025-10-08" version="1" fragment="single">MSQKDMEYYESWKLIEKYSRIEGVLERNKDDEPAKFRDNDLTSNASKMYSKVIGVLDHPDKHVALLVRYDKKFLLEFPYIVYSRVTSSFINKLKLLFPKNSATLFNDMNQVYQTDKKGLHDKFKLVTVNMKPEAFKVLESYQQKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK79</accession>
    <name>A0ABV2AK79_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001764</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000485">
        <property type="protein sequence ID" value="MES1920037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23240">
        <property type="entry name" value="HAT_PRP39_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="394" mass="47703" checksum="D455F2CA202F6454" modified="2025-10-08" version="1">MANYFDRSIFLNEQSLLPIYEQVLKTPENLQKNIYFLEKAVETKNEKIVEHIIDKISDRFLIPAQKWLKIAQTFDENEKMFLKICEMGLKQFPTETLWIAYLLKLIKLKKLKKIDFELLSRKFDCAIDQIGFYSSKLLDVSKNLENEIKAKNFSEKRKSENWNNLNFENKFKTLTENSKKGKLDESETYFHFNSYVEAIKLNFKNDKNLTKFIKSIFERFIEHFYFFGIFWKEYLNFAEKFDDIKNIINVYERALKSNPDKFDFYENYFLFLEKNKMQNKIEEVALNAEKRKLCGENNIFIRFFPIVSKIRQLRLRKQNLTEQNLDKIREEMDKFYKTALKNKETKNCFEIFHFFGFVELKYFSDSAKAKFWINRNLEIFNNSVKAFTVFYSFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA3</accession>
    <name>A0ABV2AKA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001817</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000512">
        <property type="protein sequence ID" value="MES1920100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="17623" checksum="81E3E0A44AC56E6A" modified="2025-10-08" version="1">MDWYQSRYLRLYLNEHFCLWPQIFIVLKTNFGNLKYIAQISLLKIVTMKLFYPLKPVNLELNLFSGGNKENILNNGQILVNFELIEKSKIDENALKLPILYPLKTLYFLSVASLGLRDVISIFPVNKPFLRFYYENGFYKFYFSQKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE1</accession>
    <name>A0ABV2AKE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">General transcription factor IIIC, polypeptide 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">GTF3C3</name>
        <name evidence="1" type="ORF">MHBO_001512</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000383">
        <property type="protein sequence ID" value="MES1919732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039340">
        <property type="entry name" value="Tfc4/TFIIIC-102/Sfc4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23082:SF0">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23082">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="360" mass="42073" checksum="7E018ABF92D3D2A9" modified="2025-10-08" version="1" fragment="single">MSSAGIDTVKHSEANISDNEEIDETSLFSAANHAIIKSDYENAKIHLLKLIKAGPYKSKYYGMLGYVYENLGDVPKSLQMRFTAANLMKQNCPSSNWVKIAEQCEENNLYPLLEQCYDKLMKLFPNDRFIALKRIRNLRKMGKSPKTVSVYGDILEYTKDKDILIEGLNLCLGKNYFPKKYYEKTRYFKQINPVTSNIVAEDVILSNIESPKSFKKREKIDDLIEIDIDQPVENSKKAKICDNKMDENFERNELFNEELEKFDFGNDEMIETNAPMSLPEDFENELFGDVRMLDDLRQFDNFDLPISKEENFKNLNFKENQNFETNKILQNENLAETKKTKPENPRRKAMYLIEKYFGFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG5</accession>
    <name>A0ABV2AKG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Medium-chain fatty acid-CoA ligase faa2</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">FAA2_1</name>
        <name evidence="4" type="ORF">MHBO_001883</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000541">
        <property type="protein sequence ID" value="MES1920186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.980">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272:SF33">
        <property type="entry name" value="AMP-BINDING DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="3">
        <location>
            <begin position="133"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="251" mass="28689" checksum="02299CFEBA198A14" modified="2025-10-08" version="1" fragment="single">MGNSAGKFDYETALKNDITLQPTKHFKSFESLGYQDVKTLWELVNAVYKKFPELRFLGRRRIDDDGNLREFVWITYKQGIQTINFLSSGITSLISELGPSEDSDLKTKSNHPDSEQEDDQYMKNFFAYCEDANENIGIYSKNRPEWMLTAIGVHSIKQKAVPLYDTFGQESICFIIGQANLRVVFCSADKVEKLIQAKESGDAASLKIIVQFDYDPKYNNKADMVQTEMVEKSKTAGLRLLGFQQLLRIVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA2</accession>
    <name>A0ABV2ALA2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Centromere/microtubule-binding protein cbf5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CBF5</name>
        <name evidence="6" type="ORF">MHBO_002125</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the pseudouridine synthase TruB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000683">
        <property type="protein sequence ID" value="MES1920460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02572">
        <property type="entry name" value="PseudoU_synth_hDyskerin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd21148">
        <property type="entry name" value="PUA_Cbf5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2350.10">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.10">
        <property type="entry name" value="PUA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012960">
        <property type="entry name" value="Dyskerin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002501">
        <property type="entry name" value="PsdUridine_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036974">
        <property type="entry name" value="PUA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004802">
        <property type="entry name" value="tRNA_PsdUridine_synth_B_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032819">
        <property type="entry name" value="TruB_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00425">
        <property type="entry name" value="CBF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003280">
        <property type="entry name" value="PRK04270.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23127">
        <property type="entry name" value="CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23127:SF0">
        <property type="entry name" value="H_ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08068">
        <property type="entry name" value="DKCLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01472">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16198">
        <property type="entry name" value="TruB_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01509">
        <property type="entry name" value="TruB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01136">
        <property type="entry name" value="DKCLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50890">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dyskerin-like" evidence="5">
        <location>
            <begin position="38"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="PUA" evidence="4">
        <location>
            <begin position="286"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="7"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="344" mass="38606" checksum="E6152575E2277E47" modified="2025-10-08" version="1">MSEESSETSTSNEQNSSETTIKTEKHQIASQTPSNPIDTSKWPLLLKNYDKLLVKSTNYTPIPIGYTPLKRPIREYVKYGIVNLDKPANPSSHEVVAWIKKILKVEKTGHSGTLDPKVTGNLLVCIDRATRLVKSQQNAPKEYVCVINLHQKTTRKKLESALETLSGPLFQRPPLISAVKRRLRVRTVYSNKLIDYDEEKGLALFRTSCQAGTYIRTLCVHLGLVLGVGAHMEELRRVKTGCMDKSKNMVTMHDLLDAQWLLDNKNEESYLRRVIQPLEALLINFKKLVVKDTSVSAVCHGAKLMMPGLLRYSDKIEIGDELVLITTKGEAIAIGIAQMTSHQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALE9</accession>
    <name>A0ABV2ALE9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000700">
        <property type="protein sequence ID" value="MES1920491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="34016" checksum="803407AEAEBC1943" modified="2025-10-08" version="1" fragment="single">MAENQNDQIKKLEAKLSEKDKTIDILKAQLAVFNKSEKPLCKNGNCKHFQELESIKRELELNIVDSKIKMVDIVDRVNDLQYRNDRLENILAGSPQRYKRLVDELDRALKKAPSESEDIRRSMLLMRTLSEKLSVHVPESPPECYMANNSSSKDILFEGIIMRLEEFRKIFESCSEETIGKNFCVLSASISKLVSSIDITINGSKYLRQKLCFMRASGTGGLSNISSSRQDKASLALLKSLFCPSTDSNAPDELKLEKGDDIYHPFFFCPVSKVNVTERVSENDMKIVFSDKKLKPTKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ1</accession>
    <name>A0ABV2ALQ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CID domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002081</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000654">
        <property type="protein sequence ID" value="MES1920409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006569">
        <property type="entry name" value="CID_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008942">
        <property type="entry name" value="ENTH_VHS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12323:SF0">
        <property type="entry name" value="CALCIUM HOMEOSTASIS ENDOPLASMIC RETICULUM PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12323">
        <property type="entry name" value="SR-RELATED CTD ASSOCIATED FACTOR 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04818">
        <property type="entry name" value="CID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00582">
        <property type="entry name" value="RPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48464">
        <property type="entry name" value="ENTH/VHS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51391">
        <property type="entry name" value="CID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CID" evidence="1">
        <location>
            <begin position="26"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="257" mass="29695" checksum="327DC860929791F6" modified="2025-10-08" version="1">MSDINFQMEFARKKAKSLKPKNFRDLSAQEKDQFQFILSKLDGSEESIKGAKKWVVSRGEACKDIAILILNKLKQIRPYDFQNKLFLLYLVNDILHSSLCHRLKIEVLDSMSLSLLHVLPEMLQMAFAKSGQSEKDKLYSLLTLWHNRLIFNGSTIDDLKLRMSSDSLVQKTEKEQINKMDSLDLSAGYFVYLARGQSKYTPMDARRLAVQSDFGLSKLEPDERVFAQLEKLEKVLGELDPTLKCSVLEYKRFFCSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU8</accession>
    <name>A0ABV2ALU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GIY-YIG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000638">
        <property type="protein sequence ID" value="MES1920378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="151" mass="18065" checksum="A77C6A963E434C70" modified="2025-10-08" version="1">MSLCYCNKKQNEFCPEAPIVLMTKYLKNGTDYINKIADSFRNGYNYKISYNRNKFNNRNVQISEFALNNIRRYQTSNNSRTFDEDEFEKENKNVEKRAGKIEKVDDYKKYGEYKEEIIKAEQQAELIFEKEKSSSSVYYPELPLNLDLLWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALW1</accession>
    <name>A0ABV2ALW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002097</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000665">
        <property type="protein sequence ID" value="MES1920429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="103"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="103"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="18434" checksum="EC3989C881181F90" modified="2025-10-08" version="1">MVVVSDPDKDSKTDLIYRPRARTNSQNSFNFIFNIVVASLSLAFVLLINFYAYFNIPKIDHPVFNQKIRKTEKHCFDDKRCSRNCKLSETRRLFRLHDQKPHLQNQTDSNSAQLFSHRGDRNRSVQQQRRNIQRFCFTLRSFSSSPLWRFSSPCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM64</accession>
    <name>A0ABV2AM64_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000843">
        <property type="protein sequence ID" value="MES1920751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="13566" checksum="D0D3263D78691EA0" modified="2025-10-08" version="1">MVGDKCPFVCEEDYETSGGAQNGVAVCKETLNGLFEFEGDIGCYLKEKKSNTLVIVLSIFGSVLGISLLAVLFLHCRKRICKKSDSTLPTVLPVKTADLKIQENMNDIEEDNEEIVEDVFSIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMC3</accession>
    <name>A0ABV2AMC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002248</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000755">
        <property type="protein sequence ID" value="MES1920594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="187"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="35"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="190"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25358" checksum="CECEBFE94A835F1C" modified="2025-10-08" version="1">MSEIKANDTKIETKQKTAKNDENCEERNSVANAKNIKDNDVKNDENLSNVQTTNPPFIPIPPPGLVPLTNIANSANPNIANVPNQTGNQYAQAPLSSFQFTNVNGMPANLPGGYNFPTGMNIPFIPINPPEIDPPEKYEQFVPVDSDTRPTYVVDEMNSGPKDHAGQHMFKFFDMYGYQKTREWEDLKKQKQKPQKVTKKQIQIFKKKKKQRQLRSLIERLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMQ0</accession>
    <name>A0ABV2AMQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Large ribosomal subunit protein mL43</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">MRPL43</name>
        <name evidence="8" type="ORF">MHBO_002546</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the mitochondrion-specific ribosomal protein mL43 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000971">
        <property type="protein sequence ID" value="MES1920941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039927">
        <property type="entry name" value="Ribosomal_mL43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007741">
        <property type="entry name" value="Ribosomal_mL43/mS25/NADH_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21396">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21396:SF2">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN ML43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05047">
        <property type="entry name" value="L51_S25_CI-B8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00916">
        <property type="entry name" value="L51_S25_CI-B8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 8" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal protein/NADH dehydrogenase" evidence="7">
        <location>
            <begin position="18"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00035188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="21066" checksum="25B50D7FC6B74678" modified="2025-10-08" version="1">MSINGIPQLKKIVLSYCKVSGSSLGVKAFLVKDVIKFSQNNPHIEFIVRSEGYSHPKISAHYVNGFKKDIELRNKTPNEIQLVLDNLRTRCGDENKKRWLRGTETEHVSLQGEWRPGMYETQMDIEPIQQVYRNKDGSIFRPQNDLPKIDWKRIDFDKNGKVSSKAYRYQHKIDRILNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN09</accession>
    <name>A0ABV2AN09_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Palmitoyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.225</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ZDHHC21</name>
        <name evidence="9" type="ORF">MHBO_002644</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="7">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010001048">
        <property type="protein sequence ID" value="MES1921046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019706">
        <property type="term" value="F:protein-cysteine S-palmitoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039859">
        <property type="entry name" value="PFA4/ZDH16/20/ERF2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12246">
        <property type="entry name" value="PALMITOYLTRANSFERASE ZDHHC16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="8">
        <location>
            <begin position="104"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19324" checksum="AA8C055ED56DADCE" modified="2025-10-08" version="1" fragment="single">KTKTFELKAFIMAKNLLSFKFNNQNWFVTTDYCCLITGNITIALLIFGHYAFVTFVLKPWIGFNLISILHGFFTIMAMMSHIRSQFTDPGDIKRHNKVSDNEEAKNRLCIVCFADKPASVHHCSVCKKCILDMDHHCPWINNCVGYLNQKYFVLFLFYTFLTCAIAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN43</accession>
    <name>A0ABV2AN43_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002670</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001068">
        <property type="protein sequence ID" value="MES1921081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="52"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="314"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="6">
        <location>
            <begin position="27"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="374" mass="43563" checksum="345C2CF4AD3BA21E" modified="2025-10-08" version="1">MRNLNKVKLWLTERRLSYDNKFSLFIFCLTVTKSMLGSFIFFQPLIIFNTGIFIAIFLQILSMAFSFYTFVVIGYYAALDQEIHWYSDLYLRFGVPFSVCTDIINVLVRTISNSYYLSFASKLIYVRTQKKIEFYGIVLMMGFLILLPLSLFKNLRSLRFLTIVNFALLIAILISTLVDLFKGERQKIPLAPSNWYNVFIAIPVYSGSFDCHVLILDFYKDFKKNAFRNSLERYSKISFLAFLIYFSLCFLYGIFFAFAYGNHDYDFVPSKFSALLIVFSLILSYSYFVGSILKSLDAILGKINKSAYEKSQPFVFRSIKLFFIVSITIVIAIFIKNLNLLVLFGIFGIDDCLYIPCAHCDFNRKQFCDHYKSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE5</accession>
    <name>A0ABV2ANE5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Translation initiation factor eIF2B subunit gamma</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">eIF2B GDP-GTP exchange factor subunit gamma</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002754</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Acts as a component of the translation initiation factor 2B (eIF2B) complex, which catalyzes the exchange of GDP for GTP on the eukaryotic initiation factor 2 (eIF2) complex gamma subunit. Its guanine nucleotide exchange factor activity is repressed when bound to eIF2 complex phosphorylated on the alpha subunit, thereby limiting the amount of methionyl-initiator methionine tRNA available to the ribosome and consequently global translation is repressed.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eIF-2B gamma/epsilon subunits family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001134">
        <property type="protein sequence ID" value="MES1921186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051960">
        <property type="entry name" value="eIF2B_gamma"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45989">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45989:SF1">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleotidyl transferase" evidence="10">
        <location>
            <begin position="26"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00044196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00044229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00045373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00046432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="32709" checksum="874EBCBD71352E85" modified="2025-10-08" version="1">MEVRASKGSINDFAAIIMPFEDENGLYPLCTKRSKSFLSIVNKPILEYQIEYLLNFKFNQIAVVVKKDEYSAFERICTKFVGDANIIYLPFDDFENMNTFEILKKAAETYFNNNFLVLDGNLLTDFDVNLLFEFHILRNSKFTAVFNQPKQENKIKDGSKTNIKCSEIIAVPKYEQEHIVFSKFVDKNAKFEGIDIDKDVIEKHASLSVFSALKNINLYCVSSEFFSSAKTDLNGGKMAKSLIPLFLNLENVDCHLFKITDSEVVCRNIENPQIFKETNFEFVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS6</accession>
    <name>A0ABV2ANS6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Mitogen-activated protein kinase</fullName>
            <ecNumber evidence="8">2.7.11.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002859</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.24"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="8">Activated by threonine and tyrosine phosphorylation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.24" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010001238">
        <property type="protein sequence ID" value="MES1921317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07834">
        <property type="entry name" value="STKc_MAPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003527">
        <property type="entry name" value="MAP_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050117">
        <property type="entry name" value="MAPK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24055">
        <property type="entry name" value="MITOGEN-ACTIVATED PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01351">
        <property type="entry name" value="MAPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="40"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="421"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="464"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="23"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="425"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="470"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="486" mass="55544" checksum="8CD1AD9D44A47450" modified="2025-10-08" version="1">MESKSTSPQKPNEDPNTPAPVVPKKESKNHFPKESLGSEYEFVSYIGSGSYGHVCKAKQVQSGKMVAIKKFSGVFKSSTNTLRLLRELRILRALRSHPRIIKLIDIIPPKNLISFNDLYIVLEYMDTDLSRIIHSNQYLSRTHVQYILYQILLATKGLHSAQIYHRDLKPQNILINENCTVKLCDFGLSRGAPTSKNSETRRLTSHVVTRWYRAPEVIFLTSEYTSSIDIWSIGCIFAELLGMLRENMVMVKGRMPLFPGISCFPLSPRRTDMSENSFFLDQISLILHVIGTPTSIELSDFNHCVAKNYLNSLPYWPGIDLKKKFPASNDLEIDLLRKMLRFSPSQRLTVEEALSHPYLKKVREIKHETNFEPVEFEFEGLSMSKHGRGLLMREILKYNRGIRESISIGLAVKPGNKNGEFKNGQFASSKSVSIPKSGKSNQKEEKALKKDFLKDKFEMDSLKSKNVKSSGKEYRRRTSIDKKEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANU2</accession>
    <name>A0ABV2ANU2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Clathrin heavy chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002861</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001239">
        <property type="protein sequence ID" value="MES1921318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055358">
        <property type="entry name" value="CHCR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000547">
        <property type="entry name" value="Clathrin_H-chain/VPS_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10292:SF1">
        <property type="entry name" value="CLATHRIN HEAVY CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10292">
        <property type="entry name" value="CLATHRIN HEAVY CHAIN RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00637">
        <property type="entry name" value="Clathrin"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00299">
        <property type="entry name" value="CLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50236">
        <property type="entry name" value="CHCR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="CHCR" evidence="1">
        <location>
            <begin position="29"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="repeat" description="CHCR" evidence="1">
        <location>
            <begin position="176"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="repeat" description="CHCR" evidence="1">
        <location>
            <begin position="326"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="564" mass="62890" checksum="250FBFF0F46A621B" modified="2025-10-08" version="1">MSPEEGLQCLSEIISFDPEQNLPLATEVASRYSAQLTPSALVRLFEEAGQPAGLFRYLGFIVNSSDDPEIVFKYIEAAAETGELNELRRICKENDVFEPERVKIFLFERDMDDPRPLIAVCDRFGFIEEMTQHLYAKEMMPFIETYLQKMNPRAAPAVIGALLDLGAPEPAVSVLIDTLRPEAMGEGFAELVEQTANRGFTQLLLPWLERLASEGSEFPALHNALGRAYVEQNLSPEHFIETNSFFDPAELAAFCESRDSRLAFLCFKKARGRCDGDLLRVARENGFYLELAELLVGRQEEPLWISALGEDDEHRKALIAQVVTALSKSREPEEVSVAVKAFIAAELPNELIELLERLVLSGPPERGFKNNKNLQNLLILTAIKADSSRVMSYLGQLSDYDGPDIAKIAVSDQYKLYEEAFQIYERFDCENEAMDVLLEKMGALERAKAFAEKAEKAELWAMLGDAQLAAGSIKAAIESLLKGGVVGQPEKIIAAAAAAENWEELTDYLKMSRGSIKSAVVDSELLFAFCKTGKMDEIRLFLNEPNSAQVDEVGYRFSTFELIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE9</accession>
    <name>A0ABV2APE9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycerophosphoryl diester phosphodiesterase</fullName>
            <ecNumber evidence="2">3.1.4.46</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glpQ1</name>
        <name evidence="2" type="ORF">MHBO_003071</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.46" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001468">
        <property type="protein sequence ID" value="MES1921544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008889">
        <property type="term" value="F:glycerophosphodiester phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="1">
        <location>
            <begin position="22"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10988" checksum="AE9E16BAA6240C2D" modified="2025-10-08" version="1">MFLIRKLFQNRPKNVYTKKWGTLNVGHRFSPQPFRGCRIPGVVENTVESIEKGSCLGFKAIEIDVQETKDGIPVLLHHKSMKAFDENGFQYNLRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APH5</accession>
    <name>A0ABV2APH5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">RPB2</name>
        <name evidence="9" type="ORF">MHBO_002960</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001341">
        <property type="protein sequence ID" value="MES1921429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1110.10">
        <property type="entry name" value="RNA polymerase Rpb2, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007644">
        <property type="entry name" value="RNA_pol_bsu_protrusion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007642">
        <property type="entry name" value="RNA_pol_Rpb2_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037034">
        <property type="entry name" value="RNA_pol_Rpb2_2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04563">
        <property type="entry name" value="RNA_pol_Rpb2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04561">
        <property type="entry name" value="RNA_pol_Rpb2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase beta subunit protrusion" evidence="8">
        <location>
            <begin position="7"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb2" evidence="7">
        <location>
            <begin position="117"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="276" mass="31717" checksum="39C9F1D6C10B4EC4" modified="2025-10-08" version="1">MSEELIKEDSDRIFLGQLPIMLRSQYCTLNSHYKKGDALVDLGECAYDQGGYFIINGKEKVIVAQERLRNNNVYIFFRKGIFVAEVRSQLEKTNNMLSSFFIKLEILKKGNSSGIPVIRATIPLINQDIPIIILFRALGDVSDKVILERICYNLEDSEITELLKGSLEEAEFITNQELALDYIGRRGKAIGNPKSERIIYAKNILQNELLSHIGVNDWCETQKAYYIGYIINRLLKTYIGRSKPDDRDHYSNKRIDLSGALMAGLFQKLFHRFYTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW6</accession>
    <name>A0ABV2APW6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Shikimate dehydrogenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003036</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001430">
        <property type="protein sequence ID" value="MES1921509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10860">
        <property type="entry name" value="Leucine Dehydrogenase, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminoacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013708">
        <property type="entry name" value="Shikimate_DH-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022893">
        <property type="entry name" value="Shikimate_DH_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089:SF1">
        <property type="entry name" value="BIFUNCTIONAL 3-DEHYDROQUINATE DEHYDRATASE_SHIKIMATE DEHYDROGENASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089">
        <property type="entry name" value="SHIKIMATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08501">
        <property type="entry name" value="Shikimate_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="Aminoacid dehydrogenase-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shikimate dehydrogenase substrate binding N-terminal" evidence="2">
        <location>
            <begin position="44"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase" evidence="1">
        <location>
            <begin position="160"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="286" mass="32157" checksum="C1D0192E422DAD60" modified="2025-10-08" version="1" fragment="single">EMSPCACEGQKRRAAKGQFTMKQLLNLRNGVPNKEMKKKEKVLLFGSDISSSLSPSIHNFVYSCLSIPFSYFVCEKTSFSDVKKKMQEKNYFAANVTMPFKEKMFGYLENNSKDASAIKAVNSVHRDAETGKLIGNNTDWKGLLTNLEKMALETGERFEHNAKAVVIGAGGTSRAAIFALKKFGIEAKSIFVFNRTLEKSLLVSKEFECSFVTSLEDIYFKNQVVILVVTVPNNARLQIPSALKENENLIIIDFNYSNDLTFVEKQILKPLYSIRGINILVEQVAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW8</accession>
    <name>A0ABV2APW8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001675">
        <property type="protein sequence ID" value="MES1921720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046121552" evidence="1">
        <location>
            <begin position="17"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="20136" checksum="45FB0ECF0F2CF841" modified="2025-10-08" version="1">MSFFLILLLNVILTSRKQVCPFPRYLNDRYEKDLKRTVIECKNKNKVLNFHNDKKFGWLFGECFDKPEPVYFVEDDITGKIVKFNGEPECTAVESDQVEKQCDTGVLDDLFKFKKFFAKFSEQNVYRFDCENEGNFSFRVKCKNGMFEFWYGGKMLDENEVIDICFERH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX2</accession>
    <name>A0ABV2APX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Glycosylphosphatidylinositol anchor biosynthesis</fullName>
            <ecNumber evidence="9">3.4.11.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">GPI2</name>
        <name evidence="9" type="ORF">MHBO_003239</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PIGC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.19" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010001659">
        <property type="protein sequence ID" value="MES1921709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009450">
        <property type="entry name" value="Plno_GlcNAc_GPI2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12982">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL GLYCAN, CLASS C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12982:SF0">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06432">
        <property type="entry name" value="GPI2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="4" id="KW-0337">GPI-anchor biosynthesis</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="77"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="199"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="26325" checksum="8AE33BC0582FB765" modified="2025-10-08" version="1">MAIRKLYEPEKNDNYTDKTFIDKVDKMAAMKTPGHFSYIILAYKFDKVVQQISSVFATILLFDFVSKNRKILAFGHYKILATEFAAMASFYFFFVHFWNIPKLQTSHFVEMFVFHLLLAIFTPILKNLTFYYSDSAIWSLVSFCFVTNVVFHEYAKFARIDGPEGLLSVPLTLSEATSLNAAISGCVILSSRLDSNSDVIFFLTLAFQIFVFSPIFFRILRVFKISKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ02</accession>
    <name>A0ABV2AQ02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003269</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001701">
        <property type="protein sequence ID" value="MES1921740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045335289" evidence="1">
        <location>
            <begin position="19"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="26781" checksum="9BEC79AC5EFAD27A" modified="2025-10-08" version="1">MAFIKKLMLLALQSIAITKSIDRDYLLLPGVSSIAIDFSPAQISAVDSLVLLAFKPDLPLDCLQISCLAHVELFQVGKEKKLLVSAAVSLDYSATKPFFYLDNFCGVQLSPEKGYRLVFVKPAELPVFFGQPKAPIDGDYRVFRPMLNTSRSIETEWIGKVFAFEMELRQLEMVAAPFLPEKVVERAEKEQLLDKTGRFAMLELSLTRNNASESRCCSFSTRFAGFAMVAFVLLFLRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ06</accession>
    <name>A0ABV2AQ06_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003017</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001409">
        <property type="protein sequence ID" value="MES1921488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="304"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="407" mass="48644" checksum="48F54567CF38A7B2" modified="2025-10-08" version="1" fragment="single">RNHKYQTEKIKIALENLETKRSQLNINQKDKDNFQKLAYNSFNQERINVDCETTKIEFDLLCQQYDLVMKKITDKLILLSKNRFESMVSIIKDITLNQINYHKNEFESWGKLNKILENTNINNDLEIFSKENTKEIEKIYLERNMLEIYENEKMSKNNEKYVPDINTLEYNKIKNLYSFNSWGKNGFNNVVNGVNNSFKDTSEYIRLLTELKNIIRFVRDRLNNFLVSKNKPEENSNELFNETSGLIWDYMNFESRQLLKYFKYLEDNLFNLKYTKNLLKSTVKSTKIDLKTREKFLNKINRKIDNLIDLKMKSELNVKKLSEEYETKQTKLKSVRIDHLMEASLNLNHLFKNLCKHIEIKDNFESEYLLEKSNANILEANKILSTAYCMDLLQDKDKSRYLLTKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ16</accession>
    <name>A0ABV2AQ16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003291</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IST1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001728">
        <property type="protein sequence ID" value="MES1921760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.60">
        <property type="entry name" value="Vacuolar protein sorting-associated protein Ist1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005061">
        <property type="entry name" value="Ist1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042277">
        <property type="entry name" value="IST1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03398">
        <property type="entry name" value="Ist1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="12777" checksum="2C548A580BC00BC1" modified="2025-10-08" version="1" fragment="single">ETYLKLAISRVQVNIEKKTNFVADTKKEIANLFQNKKTDLAMIKCESLIRSEDLVLCLEHLIVVIEVFSCHLDFERKSWSHRFFGRIAYRHKRENLDVQILFRSHRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ32</accession>
    <name>A0ABV2AQ32_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Copine-4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">CPNE4</name>
        <name evidence="4" type="ORF">MHBO_003044</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001436">
        <property type="protein sequence ID" value="MES1921518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045052">
        <property type="entry name" value="Copine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010734">
        <property type="entry name" value="Copine_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857:SF106">
        <property type="entry name" value="C2 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857">
        <property type="entry name" value="COPINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07002">
        <property type="entry name" value="Copine"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Copine C-terminal" evidence="3">
        <location>
            <begin position="1"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="176"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="246"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="176"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="407" mass="47596" checksum="C4F59908E290CA4A" modified="2025-10-08" version="1">MSCYKDTLQRITLGPSKRISEIIRDVISYSKSSSSPNEYTVAFILTTSANFDTEDTFRELENASGLPISFVFIGIGPGDFSNLKNMLNKKKSKNYIRKNYDFVSHEKIKRSVGESTVDEKLSHRALGRINSQFLQHKKLRSIRPNKPDMNPLMRVDLVAEEHLRFNQKLIFAQQQQQQQKPIQPNKMQNQTQLVQPSQQNQSVQSNVQPEKSEQDLIVEKRALDAKLNENLTKMSIRDETEKFDKQDLLSEKTARLERKVEEKNNAKQSLAEKEIEREKQQIEEEKKRIELEKRKIEERRKNEIEERRILEIEKKNLEDEKKKIEQQKNAKAKKGMEEKNELEDVGAKVEKTIKTQSAQKAKFERMEAQKITESKNSVSDDILERIKSLKKELPVEKKKRVVLNDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ67</accession>
    <name>A0ABV2AQ67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003348</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001805">
        <property type="protein sequence ID" value="MES1921813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="364" mass="42634" checksum="42C80C878E972FC9" modified="2025-10-08" version="1">MLMSTKVKKHDDTKIFFEIISNHLSKQITNFEQNKICSEEKLHSLFLMAIFLIKNLQILNLKICGFEKTFSRLIKTALFFVHNWTDIYIVDPATRLITEINKIFKNNDRKLENDGLLSILIKIGSLSKNVTKNENIKIDKNEKLGTLDKQSKTPKKLNKYQIVVFGNFLNTQKKIDKFIIDISPLLQTKFEEDSKNGIQFSAKMRFWPLWKKKEFEKMITKSVLKNGKAVLFSSSKQNCEKMAKKITILGHSVIVEPSFENQFFARNEKFFIENMRDKDQRLELFEQLILTAIKMANLFEKDLFVEFWQKLDSIKSQNAMFGIAIVLGQIREPIFYGRMSTVSYLSDEKIWTEAVKIGLMFELF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ80</accession>
    <name>A0ABV2AQ80_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Spindle pole body component</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003139</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
            <location evidence="5">Cytoskeleton</location>
            <location evidence="5">Microtubule organizing center</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TUBGCP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001547">
        <property type="protein sequence ID" value="MES1921611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1900">
        <property type="entry name" value="Gamma-tubulin complex, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007259">
        <property type="entry name" value="GCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040457">
        <property type="entry name" value="GCP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042241">
        <property type="entry name" value="GCP_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19302">
        <property type="entry name" value="GAMMA TUBULIN COMPLEX PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04130">
        <property type="entry name" value="GCP_C_terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="3 5" id="KW-0493">Microtubule</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gamma tubulin complex component C-terminal" evidence="6">
        <location>
            <begin position="27"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21706" checksum="3912BE643D6C73DD" modified="2025-10-08" version="1">MFKNSNSVKAEALDPLIQKSLLTHLYTNDKKEIQNEFNLRFFKLQNKDSITVLDIFCFTYDLNPKNPLKIIFDDSSLSKYKTIFNFLWKFKFAQKLMSAQFAINSEISKRFLSFKGPKTEKINGANTILSKFVFNATILLNRISKLLFYGAVETSCKNFLTKCKTSVTITDLKENHLKFLNDLEKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD1</accession>
    <name>A0ABV2AQD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001563">
        <property type="protein sequence ID" value="MES1921623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="217" mass="25485" checksum="1233078843A3CB10" modified="2025-10-08" version="1">MECVKKSMEIVKDETSYNFLEKLEKLEREIDIKILLLESNEITLKEAKCYFIGTAQLIISFKNRKLDEKTFKKAKMLLETCVEKSEKISKIEKFQKSKNMNKSSKKTNENLNYPKIGKGIKINRLKSHKTLVKDFEVKDSISLIDQERSLLKKAKFHDDSFMKGHREASVKAFRYYKELAEIYSNNSPIELGISKNQFRAKKKIIDSRFAFYGELEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD3</accession>
    <name>A0ABV2AQD3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003416</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001898">
        <property type="protein sequence ID" value="MES1921885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16067" checksum="AC964A00186D02AF" modified="2025-10-08" version="1">MSNKLITNVQESKTNQRKYRKMAECKKCEKEIKLTECLFSLCENCCYLKGSPCSKHKVKKYNQKKVQNIAKFYENDEDFIGNKYRARIQSNFEHGQFLTASVDGINLNGMIFNKLECVNVNPQSSAEFDHFELKFGTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ5</accession>
    <name>A0ABV2AQJ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Dynein heavy chain tail domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003474</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001978">
        <property type="protein sequence ID" value="MES1921948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="274" mass="32144" checksum="82FBB0F770CDFBD4" modified="2025-10-08" version="1">MIANAKRAASLILIKIEEEFSMICQILEEQKTVFRGVQSKDFEGKETFEMVKEIVLDNDLVISWEPPSLDKFNSARMCTLNDKLYAFKSNHQIMSELQGEAENEPELYFKNVSPANLKEIIEATANLSNFVIVSAHALNDCEIKNTAQYEIICLDYETIFNSIKESLENIIEAMKTPKKCLEKKFEDDFDKTREFCDKIMENFDMYFEAVKKFLGTRKKWSIIKQDVSFEQYRLLWGLNAYFYALKKVMRNVIVLQQIAVFLVQNQQHMLWRDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM7</accession>
    <name>A0ABV2AQM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003384</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001852">
        <property type="protein sequence ID" value="MES1921849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13291" checksum="066787110E467893" modified="2025-10-08" version="1">MSEIAIKKFKNIFLNVLNNNTGYDIAPSSGKVIVFDKRLLLKDALLALIEQDSKCGVLFNYSNDKIEHIITVTDFISILLHYYDCEKNCNKDIEKLSISEWLGQFFVLFSAIYRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN6</accession>
    <name>A0ABV2AQN6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC1 atypical kinase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002037">
        <property type="protein sequence ID" value="MES1921992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051409">
        <property type="entry name" value="Atypical_kinase_ADCK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851:SF3">
        <property type="entry name" value="COENZYME Q8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC1 atypical kinase-like" evidence="1">
        <location>
            <begin position="19"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7530" checksum="E7E147FDD6C37EC0" modified="2025-10-08" version="1">MISLQEEYLPKEIAQVLAKVRDKANIMPKKQLLETLKNELGENWEDHFGEFDLTPFAAASIGQVQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP0</accession>
    <name>A0ABV2AQP0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003503</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002015">
        <property type="protein sequence ID" value="MES1921976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051044">
        <property type="entry name" value="MAG_DAG_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11614">
        <property type="entry name" value="PHOSPHOLIPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine aminopeptidase S33" evidence="1">
        <location>
            <begin position="105"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="265" mass="30173" checksum="BC95073419EFF02E" modified="2025-10-08" version="1">MPLKVNTGEQRRKVYDDHPQFRKYGHSIYNPMIPSMQFGAPNISLIQHRIELDSDLTFYLQQWEHVEGDFVDPLQEMSKLGGVEVTTMLENSNKKKFEIKKLNKCPKAVLFYIHGYASSVSFANSVVSKSFCSHNYTVYAMDGFGHGLSDGLHGFIPKFDKYTDYFEKVYNKISEDYRDCKKYLLSVSMGGAVAINILAKKHNFDGIVFISPMIKIAPKIIPGYAVQQVFKLVSFLLPTSKLTPSGMKTSDIFNDQKFAKICLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP4</accession>
    <name>A0ABV2AQP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Separin protein</fullName>
            <ecNumber evidence="1">3.4.22.49</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ESP1_1</name>
        <name evidence="1" type="ORF">MHBO_003519</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.22.49" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010002051">
        <property type="protein sequence ID" value="MES1921996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6508" checksum="5C31C7019BF92129" modified="2025-10-08" version="1">MELLTNFLSGKNDLSKSISISRKVCKMKFLTGAAPVVYGTPFAQVQKHNFDITKFDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQP9</accession>
    <name>A0ABV2AQP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003213</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001625">
        <property type="protein sequence ID" value="MES1921682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="8112" checksum="D07BF65A1BFF8360" modified="2025-10-08" version="1">MPEELSAKDNDMIELCTVYEHKKIDETIMTEKSDFWKNNNPFYLAMLYDEEPLRRFFKEFIKKTKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT4</accession>
    <name>A0ABV2AQT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Positive regulation of adiponectin secretion</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">C1QTNF3</name>
        <name evidence="5" type="ORF">MHBO_003550</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002114">
        <property type="protein sequence ID" value="MES1922033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001073">
        <property type="entry name" value="C1q_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050822">
        <property type="entry name" value="Cerebellin_Synaptic_Org"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22923:SF116">
        <property type="entry name" value="C1Q DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22923">
        <property type="entry name" value="CEREBELLIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00386">
        <property type="entry name" value="C1q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00007">
        <property type="entry name" value="COMPLEMNTC1Q"/>
    </dbReference>
    <dbReference type="SMART" id="SM00110">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="TNF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50871">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="domain" description="C1q" evidence="4">
        <location>
            <begin position="1"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="13975" checksum="FA3D06F978695941" modified="2025-10-08" version="1">MSGDMHTPAHDQILIFQSVVTNVGNHYNKYNGAFTVPDHGVYVFTWTIVMPGNGYIYTQILVNSNAVGSMSTSAFGVDNQRATTGIVVVSVNPGDVVFIKTNPHGSFNQNIISNPALYRTSFSGWKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT5</accession>
    <name>A0ABV2AQT5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Suppressor of forked domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003554</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002119">
        <property type="protein sequence ID" value="MES1922037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045243">
        <property type="entry name" value="Rna14-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008847">
        <property type="entry name" value="Suf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19980:SF0">
        <property type="entry name" value="CLEAVAGE STIMULATION FACTOR SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19980">
        <property type="entry name" value="RNA CLEAVAGE STIMULATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05843">
        <property type="entry name" value="Suf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Suppressor of forked" evidence="4">
        <location>
            <begin position="2"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="15097" checksum="DACA4BFBBBBC3AF3" modified="2025-10-08" version="1">MNKIEEILREDKYNVDAWKMILKETSIPEISRKKYNAFLSVFPTAARFWKSYIEKEIAVKNYELVERLFKKCLFNCLDVDLWRSYINYIRIVKRGSTNELRDISSFYQFRHGLRVCDQKRRNGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX3</accession>
    <name>A0ABV2AQX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003572</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002150">
        <property type="protein sequence ID" value="MES1922054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10517" checksum="E11758DF692B1B13" modified="2025-10-08" version="1">MSQSEEDRGQHYVSCAIFTNCFKFYSTCHQQMYEQRRNIHLKEEETQKIHEVVLHEERMQVLPTGECSIHTKKVLVLFCSHCQAPACEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR19</accession>
    <name>A0ABV2AR19_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mitochondrial inner membrane protease ATP23</fullName>
            <ecNumber evidence="6">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">XRCC6BP1</name>
        <name evidence="7" type="ORF">MHBO_003630</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the peptidase M76 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010002238">
        <property type="protein sequence ID" value="MES1922115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019165">
        <property type="entry name" value="Peptidase_M76_ATP23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21711">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21711:SF0">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEASE ATP23 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09768">
        <property type="entry name" value="Peptidase_M76"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2 6 7" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="22836" checksum="DD4B340D978ED2D5" modified="2025-10-08" version="1">MLNRRNLAIFDFFSMKEFLDSQTEKLRKEAFESPETKFLLLNLLQNGCKFEKGNLDLQKLPLNVVSKLAINSQNVKISINNLIHLKQNDINTALRHELLVLYDYCRAQTDFKDPKHRACSILRATNLSGECSFKNEKRRNYEVGSDKRNGCIKRRAVKTLMLQNFGSEESKKLVEEVWVPCFYDTTPYPQRPVNSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR91</accession>
    <name>A0ABV2AR91_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cleavage stimulation factor 50 kDa subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003708</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002374">
        <property type="protein sequence ID" value="MES1922195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044633">
        <property type="entry name" value="CstF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44133">
        <property type="entry name" value="CLEAVAGE STIMULATION FACTOR SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44133:SF2">
        <property type="entry name" value="CLEAVAGE STIMULATION FACTOR SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 7" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="17"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="106"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="157"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="237"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="31168" checksum="7C05BAE9C4DC5C39" modified="2025-10-08" version="1">MEFSDDTVSLKPVVRTFYDNVAPVNDLDFHPKATLLISCSQDNSIKFFDHEKMIQKKAYNEIVERKNIRSIQFHPSGEYIISAGDNRFIRIINVQNFKTFISRDSLKQHKHPINQVRYNEDGKTYVSCSKDGQIKFWDGLNNICYRTIENAHGGAPVSSIHFSQNSKLLLSCGPDSTARIWDVGTGQEWLKIQGFRNDSYRSNAVFFHSDAFVLCPDKTSNSIFAFDKNTGKKVRQFLGHSKPVKCLSVSQSEPAFLSCSFDHRARFWGEEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART0</accession>
    <name>A0ABV2ART0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003868</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002661">
        <property type="protein sequence ID" value="MES1922362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026003">
        <property type="entry name" value="Cohesin_HEAT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12765">
        <property type="entry name" value="Cohesin_HEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="29877" checksum="2007BA37AD71EAB5" modified="2025-10-08" version="1" fragment="single">VKSIFLLTIEKFFKKVKNLTLTNWKCPKSSEKEKFSPIFSFYSKKIQMSKNKFTFLLARQFYVMYAANNFFRGNKKIHFRIKENFLQKYINPLKKLSFFDAIENDIVTRETFRFLSFKNWENRKILESLIDVHFILKSLLFEGIISLRIQGMSIFSEYIKIYPKILQNGQIFSVLRERCRDQSAVIREMAVSIVGNVFLDNNDSELLDLLQSRILDSSVVVRKSVIGTFIEYLNKNEINDNFKMIFCALLDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART3</accession>
    <name>A0ABV2ART3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA primase subunit pri2, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">PRI2</name>
        <name evidence="1" type="ORF">MHBO_003632</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002241">
        <property type="protein sequence ID" value="MES1922118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.930.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007238">
        <property type="entry name" value="DNA_primase_lsu_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10537">
        <property type="entry name" value="DNA PRIMASE LARGE SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10537:SF3">
        <property type="entry name" value="DNA PRIMASE LARGE SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26466">
        <property type="entry name" value="DNA_primase_lrg_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="34837" checksum="26EC8DA3BC885C5D" modified="2025-10-08" version="1" fragment="single">ENLIGQIEIDSLENAVFNRLEIYEEIEKKTLQNIAKKSIANQITGLISINQDSKSDFVSHMILRLGHCKQFFIKILKFDENDKFLREATRKIFLRAEEIIFMSRFHSSSEFEQQKFIKENDINYQIISKEKIEKLLRTNRFSENNFESKNENFYSVPFENVLDLVSTRKVFIKNGFAIVPRSLLNHIIFTKFRSQLSKKLSKSYRLLQLTKFDGRLNPLIEAISSRNFSADKKYSKSSGNVSIRDIEDFSVVHAELVRTFEKRRSFETRRENASFTVFEVDRIAVQRSDEILEIAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARV1</accession>
    <name>A0ABV2ARV1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TFIIF beta subunit HTH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002722">
        <property type="protein sequence ID" value="MES1922397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040450">
        <property type="entry name" value="TFIIF_beta_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02270">
        <property type="entry name" value="TFIIF_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TFIIF beta subunit HTH" evidence="2">
        <location>
            <begin position="42"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10906" checksum="737CB097F34EA743" modified="2025-10-08" version="1" fragment="single">MTEKDAKTDFQKEKILQTGANSDLAENKPGNRQKKKRKMRHRMDQNELINKLFEAFDNKSHYKLNELVLLTDQPLVSKLILELFEGDFAEDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE3</accession>
    <name>A0ABV2ASE3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Chromatin-remodeling ATPase INO80</fullName>
            <ecNumber evidence="4">3.6.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">INO80_2</name>
        <name evidence="5" type="ORF">MHBO_004072</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of the INO80 chromatin-remodeling complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="4">The DBINO region is involved in binding to DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the SNF2/RAD54 helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010003088">
        <property type="protein sequence ID" value="MES1922557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050520">
        <property type="entry name" value="INO80/SWR1_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685:SF2">
        <property type="entry name" value="CHROMATIN-REMODELING ATPASE INO80"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685">
        <property type="entry name" value="HELICASE SRCAP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU368001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="24720" checksum="E2E18DB10A8FB88B" modified="2025-10-08" version="1" fragment="single">MAPKKEIVIKCELSSRQRILYNAVKDQFRSDFSKRNQDKLAGEKDLYNAVMQFRKVCNHPNIYQKRLKKTPLSFNVRLPPQILLTNLPKEEIGKRILHFEFQNPICFRIPRCVDNEKCQKMDAKYFNKFNVFGVENINGNENFAFAKFFKMTLNEIESYAKSDKLLRWIFDQQKEKNWLNIKKLDFRKHFKNLDEYPNLIKNAFIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG8</accession>
    <name>A0ABV2ASG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004142</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003266">
        <property type="protein sequence ID" value="MES1922625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="22980" checksum="354F4AAEED8F2C9A" modified="2025-10-08" version="1" fragment="single">EKNDLKENQKRVLEELRQKTLKLKNPFLLKENSVNANEIIKVLNFENKNYHDWRFSLDNLSSDLVQKFSETSLKKLRQNSEINRSMIYSYISVPQIAVDKIYKIISETKLDNPKFNKKYPNPHVTLIFKNHSNEKLWKECLRYWKNRALFKVVISGLAIWADKLVCSTCQIFSAEGKNMLDLVDSGHPHITIAHST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM0</accession>
    <name>A0ABV2ASM0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Smr domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004181</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003359">
        <property type="protein sequence ID" value="MES1922663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013899">
        <property type="entry name" value="DUF1771"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053242">
        <property type="entry name" value="PAM2-like_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002625">
        <property type="entry name" value="Smr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036063">
        <property type="entry name" value="Smr_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46651">
        <property type="entry name" value="POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46651:SF1">
        <property type="entry name" value="SMALL MUTS RELATED FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08590">
        <property type="entry name" value="DUF1771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01162">
        <property type="entry name" value="DUF1771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00463">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160443">
        <property type="entry name" value="SMR domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50828">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Smr" evidence="1">
        <location>
            <begin position="79"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17420" checksum="57EC1AA3366EB551" modified="2025-10-08" version="1" fragment="single">VHYSEKRHDAISSAIQRNQLYSKASVAYKQGDRKLAKDYAEKARKLQEKMQRLHENASKDIYQRRNAAFSQPINGKITIDLHGLHKVEAVAILEEKIAIWKDEKNVEILDVICGTGHHSETKDKKSILLKVVIKYLNSKNIKFRMLPAGGRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS9</accession>
    <name>A0ABV2ASS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Preprotein translocase subunit SecY</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004043</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SecY/SEC61-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003025">
        <property type="protein sequence ID" value="MES1922529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3370.10">
        <property type="entry name" value="SecY subunit domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002208">
        <property type="entry name" value="SecY/SEC61-alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023201">
        <property type="entry name" value="SecY_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10906">
        <property type="entry name" value="SECY/SEC61-ALPHA FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00344">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103491">
        <property type="entry name" value="Preprotein translocase SecY subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="74"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="102"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="143" mass="15550" checksum="71B1D62B48E0880B" modified="2025-10-08" version="1" fragment="single">QGVAYYLSPPKSLIEILSDPFHAAVYFAFILVSAALFSRTWVDVSGSSPKDVAKQLNNEKMVLKGHRGRNTVKLLYKYIPIAAAFGGMCIGALTIFADYTGAIGSGTGILMVVTIIFQYFEIYAKEQQKDGGNLLSMLKPGAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU3</accession>
    <name>A0ABV2ASU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">MSH2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">msh2_2</name>
        <name evidence="5" type="ORF">MHBO_004264</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003556">
        <property type="protein sequence ID" value="MES1922741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361:SF35">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MSH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair proteins mutS family" evidence="4">
        <location>
            <begin position="66"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="14462" checksum="5F5D00C04EF19832" modified="2025-10-08" version="1" fragment="single">MASFSEAAASPFPSSKFSNSHIYVKPEILPPSQNRMIRMRQGRHPLLDCSLDREVIANDVEMNQNSILQIITGPNMGGKSTYLKQVAAIQLMAQIGSFVPCEEIEINLVKSIFARVGAADSQSKGISTFMSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ6</accession>
    <name>A0ABV2ASZ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004227</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003473">
        <property type="protein sequence ID" value="MES1922704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050611">
        <property type="entry name" value="ABCF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211:SF14">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211">
        <property type="entry name" value="ATP-BINDING TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="9"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="ABC-transporter extension" evidence="5">
        <location>
            <begin position="105"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="234" mass="26641" checksum="991FB92560802450" modified="2025-10-08" version="1" fragment="single">MDDIQLKDDNARAFKILTGLGFSKKAQKEPISSLSGGWRVRLEIAKALFVNPDLLLLDEPTNHLDFPAVLWLQEHLLTNFKKTLVIVSHDKMFIDAVADSVIHLDHERKALDYYKGNHAAFEASRKEKKQALINAHRAQTVQIEALKEFVAKFKDKGEKRASQVQSKLKTLAKLEEELPLVRREERKLKFVFPTPALIETHLVLFTGVDFSYSAEIEPILKNINLALDMDSRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA2</accession>
    <name>A0ABV2ATA2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SARAH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004432</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003996">
        <property type="protein sequence ID" value="MES1922903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011524">
        <property type="entry name" value="SARAH_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50951">
        <property type="entry name" value="SARAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SARAH" evidence="3">
        <location>
            <begin position="95"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="49"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="107"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="53"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17294" checksum="98FFC8E828FA85EF" modified="2025-10-08" version="1">MFSFWSANKIDKIDKFKGSWENDLKFNDTDNEDEDDLFGEYSNATIVVNKTQSKRDRSKEKYDFSKPRPLKNTDEDTETTRFFEKGPKPGHKYVADYYCSLSLAELNEVLMEIKSSFENQVKRIKENYNEEREIVEYAIRVRKGDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB2</accession>
    <name>A0ABV2AUB2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004797</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005305">
        <property type="protein sequence ID" value="MES1923252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14867" checksum="497254D89958828E" modified="2025-10-08" version="1">MENGNFRYEKFFLEQVDEKNLPKQLAEWAKKCLKSIACLNMTDANLILDAFKKSAKDEKIEYSLEREFDIAKQSLRARQHKIENGDLSMKAAIDNFESFKDKSVEELEEKIFEDNLIVAKDQGFCYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE7</accession>
    <name>A0ABV2AUE7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004831</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005427">
        <property type="protein sequence ID" value="MES1923282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12489" checksum="D1B3D08DFABC1368" modified="2025-10-08" version="1" fragment="single">MEVSMKTSEENFDNYTYFQYYKDLDLPVYLKCDLEVFSGVTREFLKSMRFEELDDKNKEIYLNRIKTEHGARILVLEEASMNVATQLERAMPGDRYGQEGITPRQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT7</accession>
    <name>A0ABV2AUT7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005969">
        <property type="protein sequence ID" value="MES1923394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11285" checksum="D0E4F7284CE388C3" modified="2025-10-08" version="1">MSFCVSCYRYFRRVYGHFLAQHVTEIDLENVTVVPEESVVVVAIFYPQQETGDCPASRSVYLPQFLFFVKFFLVFPKFLNGEALLYVFYNAFPFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUT9</accession>
    <name>A0ABV2AUT9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004983</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006093">
        <property type="protein sequence ID" value="MES1923416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="17"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="80"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16594" checksum="25EBBF0C560F53BB" modified="2025-10-08" version="1" fragment="single">MAEPIINYKNAQIKQMVANSLQQQNDPQNLEKRRHVGSPLKQELYGDHETREHKTQNQKHQNQKRLTKNQPNNKYSGNNTEKENVEHQNNEKRNANSPHHKRYLYIYRETSRTKKSDGKETGTAKKSDEENGVKDEKVKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV89</accession>
    <name>A0ABV2AV89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcription elongation factor SPT5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SUPT5H</name>
        <name evidence="2" type="ORF">MHBO_005151</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006893">
        <property type="protein sequence ID" value="MES1923559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041975">
        <property type="entry name" value="KOW_Spt5_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039659">
        <property type="entry name" value="SPT5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11125">
        <property type="entry name" value="SUPPRESSOR OF TY 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11125:SF7">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23284">
        <property type="entry name" value="KOW2_Spt5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="KOW" evidence="1">
        <location>
            <begin position="34"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="1">
        <location>
            <begin position="86"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15381" checksum="5058E4AF2AC5A279" modified="2025-10-08" version="1" fragment="single">QLNVKPTEKEIKNFRTGTATRIGEKEVEDSTSAPFRHKDTVRVVSGDLAGLTGEVVSIKTPLVYIMAHHDQLNEPLSFSPDELEKYFVVGAHIKIFRGPNKGETGFVTETDNDQLVIFSDTSNKMVKANISNAVETSEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF3</accession>
    <name>A0ABV2AVF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SNF2 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_005270</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007462">
        <property type="protein sequence ID" value="MES1923652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050628">
        <property type="entry name" value="SNF2_RAD54_helicase_TF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45626:SF17">
        <property type="entry name" value="HELICASE-LIKE TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45626">
        <property type="entry name" value="TRANSCRIPTION TERMINATION FACTOR 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SNF2 N-terminal" evidence="5">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14225" checksum="18CA528072CC391F" modified="2025-10-08" version="1">MGLGKTIQMIALIGTNDFGKGPTLIVCPVSVMNTWLYQIEEHVRDRAFRATIYHGADRNTDKSTLEDFDVVITSYSVVSFEYRTFGPRQQKLKASLENSSASSDDESDFEYSRGVHSVQWFRFLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG2</accession>
    <name>A0ABV2AVG2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidoglycan recognition protein family domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005248</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007341">
        <property type="protein sequence ID" value="MES1923634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06583">
        <property type="entry name" value="PGRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.80.10">
        <property type="entry name" value="Peptidoglycan recognition protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036505">
        <property type="entry name" value="Amidase/PGRP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002502">
        <property type="entry name" value="Amidase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015510">
        <property type="entry name" value="PGRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006619">
        <property type="entry name" value="PGRP_domain_met/bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11022">
        <property type="entry name" value="PEPTIDOGLYCAN RECOGNITION PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11022:SF41">
        <property type="entry name" value="PEPTIDOGLYCAN-RECOGNITION PROTEIN LC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01510">
        <property type="entry name" value="Amidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00701">
        <property type="entry name" value="PGRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55846">
        <property type="entry name" value="N-acetylmuramoyl-L-alanine amidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidoglycan recognition protein family" evidence="2">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7490" checksum="D02EF2C37038A84E" modified="2025-10-08" version="1" fragment="single">YSFLIGNDGNIYEGRGWNRVGAHTLDFNKVSLAASFIGNFTKQLPSAAALNANEESDSVWHRPWLHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWD4</accession>
    <name>A0ABV2AWD4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005251</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007361">
        <property type="protein sequence ID" value="MES1923636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="47"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="8266" checksum="E6C5BC113EC4D430" modified="2025-10-08" version="1">MPKGKGYSSKSNEEKIKAAVKSGKISKKQMDGLSEGLLLGIIKKGDAKGGIKEKRKKVGAEKGKRGRPKAGSKVKVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AED7</accession>
    <name>A0ABV2AED7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SKP1 component dimerisation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000082</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036296">
        <property type="entry name" value="SKP1-like_dim_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016072">
        <property type="entry name" value="Skp1_comp_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01466">
        <property type="entry name" value="Skp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81382">
        <property type="entry name" value="Skp1 dimerisation domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SKP1 component dimerisation" evidence="1">
        <location>
            <begin position="56"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12286" checksum="1F75ED15857F4027" modified="2025-10-08" version="1">MVLYDNDPPEQICIPVASNNIDENVSKRWESDFIRDQTIEETVQLIKIANFIALRSLQDLACARIATLMIGKSLGQVRSLFNIEKDFDFKEEMELKRQYLWAIYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEI6</accession>
    <name>A0ABV2AEI6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Alpha-1,3/1,6-mannosyltransferase ALG2</fullName>
            <ecNumber evidence="10">2.4.1.132</ecNumber>
            <ecNumber evidence="10">2.4.1.257</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ALG2</name>
        <name evidence="13" type="ORF">MHBO_000141</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 10">
            <text>a beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-alpha-D-GlcNAc-diphospho-di-trans,poly-cis-dolichol + GDP-alpha-D-mannose = an alpha-D-Man-(1-&gt;3)-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-alpha-D-GlcNAc-diphospho-di-trans,poly-cis-dolichol + GDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:29515"/>
            <dbReference type="Rhea" id="RHEA-COMP:19511"/>
            <dbReference type="Rhea" id="RHEA-COMP:19513"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57527"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:58472"/>
            <dbReference type="ChEBI" id="CHEBI:132510"/>
            <dbReference type="EC" id="2.4.1.132"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8 10">
            <dbReference type="Rhea" id="RHEA:29516"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>an alpha-D-Man-(1-&gt;3)-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-alpha-D-GlcNAc-diphospho-di-trans,poly-cis-dolichol + GDP-alpha-D-mannose = an alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-alpha-D-GlcNAc-diphospho-di-trans,poly-cis-dolichol + GDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:29519"/>
            <dbReference type="Rhea" id="RHEA-COMP:19513"/>
            <dbReference type="Rhea" id="RHEA-COMP:19515"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57527"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:132510"/>
            <dbReference type="ChEBI" id="CHEBI:132511"/>
            <dbReference type="EC" id="2.4.1.257"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="9 10">
            <dbReference type="Rhea" id="RHEA:29520"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Endoplasmic reticulum membrane</location>
            <topology evidence="10">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the glycosyltransferase group 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.132" evidence="10"/>
    <dbReference type="EC" id="2.4.1.257" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027054">
        <property type="entry name" value="ALG2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45918">
        <property type="entry name" value="ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45918:SF1">
        <property type="entry name" value="ALPHA-1,3_1,6-MANNOSYLTRANSFERASE ALG2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="2 10" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="420"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyltransferase subfamily 4-like N-terminal" evidence="12">
        <location>
            <begin position="12"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyl transferase family 1" evidence="11">
        <location>
            <begin position="203"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00045103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00045104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU367136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="440" mass="50606" checksum="E6D7EE1D748E0004" modified="2025-10-08" version="1">MRIAIIHYNLGIGGAEKLILLVAISLIEMGHQVTIYTTFYKKNRSFEESKNPKLAIKVIPLAEKIPLNIYGKFTVFLTLVKLIIVSVFVPLNSHDVFLVDIHPIPLSVLKAKNCLRCLSVNEKPRKRFFFYGHFPDRLLTKKRGFLHRLYRKLLDPIESRSIEFADKVVVNSEFTRNVFRDCFPGIATPQILYPVSVKSKKQNESSEIDLRKNWSFLVSINRFDKAKNLFLAIETLFLLRKRHFEESKNVKVVLAGGFSENNKLYFEELVRLTESKMDLKISHFPDLEGDVVFLRNFSEKQKQFLFKIARCLIYTPLNEHFGIAPIEAMQNRVPVIATNTGGLLETVVDRKTGFLCNQNAEDFAQAVLKIVKSDSLCEKMGIEGQKHVELKFSEERFKSELSKIFADEKLSSVKNFSKSLKIFVFSAFCLIFAFVVISIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AET4</accession>
    <name>A0ABV2AET4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Cytochrome b-c1 complex subunit Rieske, mitochondrial</fullName>
            <ecNumber evidence="11">7.1.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_000202</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>a quinol + 2 Fe(III)-[cytochrome c](out) = a quinone + 2 Fe(II)-[cytochrome c](out) + 2 H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:11484"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="7.1.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </cofactor>
        <text evidence="11">Binds 1 [2Fe-2S] cluster per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="11">The Rieske protein is a high potential 2Fe-2S protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Rieske iron-sulfur protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.8" evidence="11"/>
    <dbReference type="EMBL" id="JBDODL010000026">
        <property type="protein sequence ID" value="MES1918193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03470">
        <property type="entry name" value="Rieske_cytochrome_bc1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="entry name" value="Rieske [2Fe-2S] iron-sulphur domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014349">
        <property type="entry name" value="Rieske_Fe-S_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005805">
        <property type="entry name" value="Rieske_Fe-S_prot_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006317">
        <property type="entry name" value="Ubiquinol_cyt_c_Rdtase_Fe-S-su"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01416">
        <property type="entry name" value="Rieske_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10134">
        <property type="entry name" value="CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00162">
        <property type="entry name" value="RIESKE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="ISP domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="11" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="11" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Rieske" evidence="13">
        <location>
            <begin position="129"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1918193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="24319" checksum="5FD03C7A86E66E9E" modified="2025-10-08" version="1">MLLKLAKSSKRIRSAQIKTTARLLHNMTTAQEIDPLNSYAVPNPKYQKLRGTGNPEVVQERDILLKAIPRGLGLLLYQQALGKAIHAVDLDENALGFASIEVDISSIPVGEIMSVMVSGQPIFIFHRSPADIQMAEEDDGKSMKDPEPDDKRVKKKDMLIVLGICTHLGCTPIPRAGDYNGFYCPCHGSHFDTAGRIRAGPAGTNLLIPKYKFLDEGKIVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF02</accession>
    <name>A0ABV2AF02_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">BEACH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000239</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000031">
        <property type="protein sequence ID" value="MES1918241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06071">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1540.10">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000409">
        <property type="entry name" value="BEACH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036372">
        <property type="entry name" value="BEACH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050865">
        <property type="entry name" value="BEACH_Domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743">
        <property type="entry name" value="BEIGE/BEACH-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743:SF123">
        <property type="entry name" value="PROTEIN FAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02138">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01026">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81837">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50197">
        <property type="entry name" value="BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BEACH" evidence="1">
        <location>
            <begin position="1"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="435" mass="50507" checksum="6BA1ACC42F6E6786" modified="2025-10-08" version="1">MTLNTLSGRSYNDLSQYPIFPWILKDYKSHFLDLNDSNSFRDLSLPMGCIDPNRKEFFDERFELWGENSDGIPKFHYGTHYSTPGIVLYYLLRLEPFTKLSLELQGGMLDVADRVFASIERTWESASSIGGLSDVRELIPEFFYLPQFLENGNFIDFGRTQSDVPVRDVLLPPWALGSPKIFIHKHREALESEYVSLNLHKWIDLIFGYKQKGEEAIKNRNVFYYLTYQENVKIESICDQTEKKSILAQIKSFGQCPFQLFNTPHLQKRTILKNVTDDFGNNDIETDNKIEKNGAENENFDKNVSTKTIEADTVEADTKIPKLEKETSKLSRESSLVNISTIEAPKNFPKFKFERKRLIFDGEKVVSAKFNRHFVQILKMFLIWRKNEFLLANFENGKEIVKKVFVNLIDGDIDLVEVSLNSKLVVVSFNFKNQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL9</accession>
    <name>A0ABV2AFL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000237</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000031">
        <property type="protein sequence ID" value="MES1918239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16495" checksum="E1FA23B962427912" modified="2025-10-08" version="1">MLKNIFKTISPQKSQKNLPNFNKTEKRLFYEHCKNWLFASFNNNFKYPIYAQSLCILQYIKSSKITSKSELSDFYKLFLYENGNEYFCILLGLFLNKEVDIQFRKNEKFFIDETKLGKYFCSSQTKVIKFNMCFKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG7</accession>
    <name>A0ABV2AGG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000517</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000085">
        <property type="protein sequence ID" value="MES1918564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="297" mass="34545" checksum="64BA36D0318C2804" modified="2025-10-08" version="1">MDNSEHYHYLLANDMIIYIVKIVNYSLLMMFNLVLLFIQIRIICRIKRSRKGIELVPSNVESLRFNSNFVSNIANPNGNKRGFKSVLERAKPAIVLTKIQQHILDNTSLPETYQSEICKKLFGKVIDGKHYFYTDFVPFKGKLPAFKNLKHFVNKLKKNCAELKNSNLKTILREGFDYYTFVTVLVNFELGYLFKKIEDVIATCIFFDAKETIILDADFMDSLMDRLVNSFQTETSLVENGKRVLMLQPKINEFLSKMAEFRDQPDSRSDVYDLAVGIMDELYSEAEKNGFLEERMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK4</accession>
    <name>A0ABV2AGK4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">phosphoglycerate kinase</fullName>
            <ecNumber evidence="5">2.7.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">PGK1</name>
        <name evidence="13" type="ORF">MHBO_000708</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the phosphoglycerate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.3" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000129">
        <property type="protein sequence ID" value="MES1918805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004618">
        <property type="term" value="F:phosphoglycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1260">
        <property type="entry name" value="Phosphoglycerate kinase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001576">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015824">
        <property type="entry name" value="Phosphoglycerate_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036043">
        <property type="entry name" value="Phosphoglycerate_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11406">
        <property type="entry name" value="PHOSPHOGLYCERATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11406:SF0">
        <property type="entry name" value="PHOSPHOGLYCERATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00162">
        <property type="entry name" value="PGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53748">
        <property type="entry name" value="Phosphoglycerate kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="9 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1918805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="9390" checksum="8C03E4916A0645A2" modified="2025-10-08" version="1">MEKELVYFAKALDHPKKPFLSILGGAKVSDKILLIENLFSKVDEMIIGGGMAYTFLKVLDGTAIGTSLYDEEGASFLTESKQSSIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK8</accession>
    <name>A0ABV2AGK8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">U3 snoRNP protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UTP6</name>
        <name evidence="6" type="ORF">MHBO_000662</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000117">
        <property type="protein sequence ID" value="MES1918747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013949">
        <property type="entry name" value="Utp6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055347">
        <property type="entry name" value="UTP6_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23271">
        <property type="entry name" value="HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23271:SF1">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08640">
        <property type="entry name" value="U3_assoc_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="U3 small nucleolar RNA-associated protein 6 N-terminal" evidence="5">
        <location>
            <begin position="6"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="311" mass="37140" checksum="27DBCCCD1AC5C3B0" modified="2025-10-08" version="1">MIKNSKKLQKPKSVFSKTENAKLNEKRKRFEAEICSSKTPIFTFKEYIKFEESILELAIIRCSKNTNFNDNTKDIFKERCNKKIIKIFDKLVKFRLFDVESWFEYIDFLKRENYFKAITTLFAEMLRVHSTKSKLWIMAAFWELDKNDDIDSARRLLQRGIKIFEYQIKKSLTKNVLKIDFETFWNSLKDDEMKISKRTSEQNLNFEYLGDRKLLWISLFVLEIKNLTKNMNDIGTNYMEHLKIPAFVLYEACSDFTDDDLSFRDCFSFVLNQFAKVKFDNDEHKNIAEKLIDILKLAISEMENNIYSADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS5</accession>
    <name>A0ABV2AGS5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000149">
        <property type="protein sequence ID" value="MES1918890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="415" mass="48611" checksum="83D014D2C80D8EBC" modified="2025-10-08" version="1">MFFLQAQKMLLRKSSKKVFTNFGQTNAKILTTKRFLHQDYYHPNDVPAYQTPSLGQNENQKINLEPENFVFPMSHSDVRADLKLVQFETEFQDFPNYVIDQPPEMFLPEEPTFFEFWGVHPFLVFGASFLLSKEYIVLLNNGMTSMALAIPFTVIFIFLLQQAVKIVFQENQFNMDIIWIAKSMAKWGITKSINKYKEHLKTEKRAKSLGEYLIGLKKYQVAYFAHKRQKQMVTETLNRLERLRNAQSFLKSQMDARKAEFENKDKNDFLSDKQSIDNWHKELMQNINEDVKSAQFSDIPEIESKFREFRKKKGDERSKVLNAFKEPEGDLKNYISKLRKIIGETKLSKEIVKIPSKVRYGDYLDMTVPTKHLSKEDMNKLKKGKLAIVREQIARFKKGEAPVQLLALEKSILAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH05</accession>
    <name>A0ABV2AH05_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000849</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000167">
        <property type="protein sequence ID" value="MES1918965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="193"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="253"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="377"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="434"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="790"/>
            <end position="827"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="156"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="253"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="264"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="278"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="327"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="827" mass="98330" checksum="F0DFF751D32078DA" modified="2025-10-08" version="1">MENLLLAHGFDKSVVLRLTGSYDMESIRKIGHSELAKIVPEKLDRKMIIKLLKIEEPKKRKKKKVRKIRRKRLTTIIDQQKEKVEEQIEKNEEQKEKIEIPKTTENKKEHLEEEKQKLKKHKKKKVRKKKRRKIPKNKHTKTENENLSQTKIGKQKRTENALNEKEQNLQKKKTDKTTVSSFDYLKYSMFLDSSSSSQEKTKSTVEKSSSTNQRKLTFFEATALSSGEEKSRSDKDKNFGIGLFEFLQDLSDEEVKTKDEKSPKPKKKNRRKLKIKTRLREEKRKEKDLKEHKRGAKIKLAQQIKKTENLERQLKHHKKDVEEETEEQRRERKQETERMEKLLEEQRLKSKRLKEESEIAREMVHSQKNRMTAIQKSLEEEKERILKQNEEEKRKNEERIKEIEKEAENRLRRTKAESDAKIAEIEERIRKEMEEKSKENRFKTSQELAKARSDTRKMNFLKEEHDQKLKAAIRAAQDKAREEETEKQKKILDEEYKKLEEEKEKLQKESLAKIKAEAEQRIENALRDADSKAKQSEKLERQLEEEKRKKIFEKARNERFAKEKLEQMQKDANERVKTIKEEYELKLKEAERSAEFRLKKLSVIFGLKTEIIELKNLQEKNVETESKLKELEKTLSAATNDFERFQMTGFEESEAKKGIYFFKRYSDRFDEADKQEMNELLKLQRAEKIALLENTSKREVTKLQFDSVPNASSIISTCNITIEKATTKLKNLDFRRDNLIEKLREKHSITDSDVAKQSTPLPPVGLKPLKTATLKMAMAGRRNLIDESGSEYEYTSEYEEVEIEEGEEINSEYDIVEEYESEYEETD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH40</accession>
    <name>A0ABV2AH40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000174">
        <property type="protein sequence ID" value="MES1918996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6150" checksum="056C0519B8B367B3" modified="2025-10-08" version="1">MLITVPTMAANTPKTTEKIGRKKLNMNLENDLRFDLMCFLKFPVIIIKQIGGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK0</accession>
    <name>A0ABV2AHK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001024</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000213">
        <property type="protein sequence ID" value="MES1919160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046435935" evidence="1">
        <location>
            <begin position="17"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6764" checksum="F0DA520FEA9D192E" modified="2025-10-08" version="1">MTFLVLVSALANLLYANFEKTNSKKPDKRDLNISFMDGESNYQITDPDILIIDEAFEYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL0</accession>
    <name>A0ABV2AHL0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptidase S1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001017</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000211">
        <property type="protein sequence ID" value="MES1919153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00190">
        <property type="entry name" value="Tryp_SPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="entry name" value="Trypsin-like serine proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050430">
        <property type="entry name" value="Peptidase_S1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001314">
        <property type="entry name" value="Peptidase_S1A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001254">
        <property type="entry name" value="Trypsin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018114">
        <property type="entry name" value="TRYPSIN_HIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033116">
        <property type="entry name" value="TRYPSIN_SER"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24276:SF98">
        <property type="entry name" value="FI18310P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24276">
        <property type="entry name" value="POLYSERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00089">
        <property type="entry name" value="Trypsin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00722">
        <property type="entry name" value="CHYMOTRYPSIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00020">
        <property type="entry name" value="Tryp_SPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="Trypsin-like serine proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50240">
        <property type="entry name" value="TRYPSIN_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00134">
        <property type="entry name" value="TRYPSIN_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00135">
        <property type="entry name" value="TRYPSIN_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase S1" evidence="4">
        <location>
            <begin position="23"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="328" mass="35549" checksum="6B438A6E91B16983" modified="2025-10-08" version="1">MKIIILLFSFYLCKPQKRSIDRIIDGTDVPPGKYPFVVMANGCGASLIAPNYILTAAHCESEVGNSVWIGRTEFSGGRKLNVLQKWKNGSGEGQDILIAKISPTVNDFKPILIDSGKNGFSDPNKENTVIGWGDTTPDSQYVFPKTLQEITAPILSQQDCAAMCENWWPLDTELCLKDVAGKSIAPGDSGSPLFVRSGSDFVQTGVVHGANSCAKYGIFIRVSKFVDWILNTAPGSDVVKGGNSNDSGDSYDGNSDECSFGEEQKNTFLKDFACGNSQNIDSLEMAKQKCCDCRECKGVTKTQNVFSVRKGPSTAYSPIGESSWVKVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR0</accession>
    <name>A0ABV2AHR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000858</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000169">
        <property type="protein sequence ID" value="MES1918974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22015" checksum="98387C67F88FF985" modified="2025-10-08" version="1">MGSKTLTLFVLKKRNVLIITFAVQCHKPIFNGRIDKVRTKCATTKCSAATYPNFYLMKNKSIFTNLSVTCQNNSLIEIAPYCEKPLFVYQTSNKTKDYYKKCRFGTFNGKRKMLNRCTFDADSGEAFSVNGKLVSSIDIKCGENGKSDFTLVKIYKTRFKLYRKIVRCQICQTDILTRNAGRSQLGNFVILVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY9</accession>
    <name>A0ABV2AHY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA polymerase epsilon catalytic subunit</fullName>
            <ecNumber evidence="4">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001142</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">DNA polymerase II participates in chromosomal DNA replication.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the DNA polymerase type-B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000246">
        <property type="protein sequence ID" value="MES1919285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.60">
        <property type="entry name" value="DNA polymerase family B, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1600.10">
        <property type="entry name" value="Palm domain of DNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006134">
        <property type="entry name" value="DNA-dir_DNA_pol_B_multi_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042087">
        <property type="entry name" value="DNA_pol_B_thumb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013697">
        <property type="entry name" value="DNA_pol_e_suA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023211">
        <property type="entry name" value="DNA_pol_palm_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029703">
        <property type="entry name" value="POL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055191">
        <property type="entry name" value="POL2_thumb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10670">
        <property type="entry name" value="DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10670:SF0">
        <property type="entry name" value="DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00136">
        <property type="entry name" value="DNA_pol_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08490">
        <property type="entry name" value="DUF1744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22634">
        <property type="entry name" value="POL2_thumb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01159">
        <property type="entry name" value="DUF1744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 4" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DNA polymerase epsilon catalytic subunit A C-terminal" evidence="5">
        <location>
            <begin position="726"/>
            <end position="1096"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU365029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1225" mass="143674" checksum="420DD2135F4C7CE0" modified="2025-10-08" version="1" fragment="single">GDKNGNKERELKKLLEMSTVFDSMQLAHKCILNSFYGYVMRKSSRWYSMPMAAITTQIGAEIIKGAREFLENFSRPLELDTDGVWCCLPSLFPTDFEFCDKNGVKKRFSFLCSVLNLLTHEKFENRFYQKLVKTSETAKYETKTECSIFFEADGPYRCMMLPASPEEGKTLKKRYAVFNRNNTLAELKGFELKRRGELKIVKIYQTEVFYRFLNGQNLSQIYSSAAQISNYWLDVIFGKGKGLRDEDIFDLFAESKNMSRNIEDYEKTKSTSITCAKRIGEFLGDKMIQGEGLSLKFVISRFPEKMSVSERVIPVTIFQVDDVETKKRFLKKWCKQSSMQSFDVRDIIDWEYYKERLGVCIRKIVTLPAAIQNIENPVKRLPHPDWLKKLKFNNFNQPKIKEFFIDNLNNNQNETEFEIKNIKNRSPKINKDEMSKILKEKLEKIINRKIEQKTKILIENASFDEDFPNWLKMAKLKWSKVKTKNIKPKTMNQFVKNANLKFGKSNLKIVQILKFNNSKQYLIWASTNNNLFKFYIFAPNRFLVNFYSNRKNLVNFENSQFLFKKSKKTLPQSKKLFDLYEVTPKIDSDFKDDLKFADWLNLKVSPFVEGVYEAFVPTIFKVVTKLTNNVKFVNFEEKNSKKSAKNLDDFEALSKVEKFRSKDLAKVVFVYHSRLNARGFFAVFVRDKDLLKGLVIFVNSGDNVEIEQINVGKLVDRISRKQNFKDFGKLDSKIEKKSSKNFEEATKMTEKRILIELKEHKNFFVLFQTQISFEHLFPAIKFSAPCVSVPFNKVDCKYPAFRWVRFLVTTAVNRFKTQREWWLNQSKMANYCRIPIGNLLSGDLINILDIFYARELEKNGICSWFSRTKEPDFGGYEEDEFFVKENDSKFYSSPGLYRTYCIEFRISILSVCAILFSEEIEKTEMDQTLTRKVTKMNKSKNLLKKFRSTNFLSGETGNSSKAVKVLVKMVEHLWHDAAEEEDENADLLLGNVNRWLRCRSSLAYDPYNHNYVKLTMERYLRELVKNLRKIGSEIIFLSFEKLILDTRKTDFSAASVYENFVLKSLMATKMFSILSLTKLKIWKTFLFLDSNNFAGIEEIGYNSQKIDPKLAKNSQNSKNQNNVKNYEIESNWNICEYLPTEAEKCFQTVLSIFIFEPFEKFEKTKFQNKNEILSFCKELVNTKITRYLFDILPELQRSILNTVEEADKNFFRKQSSSAINSAYNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI73</accession>
    <name>A0ABV2AI73_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NAA35-like TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000943</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000192">
        <property type="protein sequence ID" value="MES1919073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007244">
        <property type="entry name" value="Naa35_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057982">
        <property type="entry name" value="TPR_NAA35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21373">
        <property type="entry name" value="GLUCOSE REPRESSIBLE PROTEIN MAK10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21373:SF0">
        <property type="entry name" value="N-ALPHA-ACETYLTRANSFERASE 35, NATC AUXILIARY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25789">
        <property type="entry name" value="TPR_NAA35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAA35-like TPR repeats" evidence="1">
        <location>
            <begin position="130"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="355" mass="41581" checksum="E9DB1B581FC5E053" modified="2025-10-08" version="1">MSTSETYSFLIENIKSVRDILSVDNFSNVYEANHFFDSIAYLKLPILSRAILSKRINSQHFYGQIESNWIFTNKNPLLDKNYIEISKSIFDEYFNNLARNESYRLNFLVDNKILENLEWTANFSKNEKMSTSLWFYEQSLNARTHFLFLGFNLNLYEEKEHAAVFWLLSKMQKMRCDALKKYLIKLSENGNSKNGSEILKKSLQNVLITCESQQAISSSTLLLLLLSKGDKLKFGFQTIFSNGKKRFEGRFKHVLKGLSAENDFDHFSNEIDLINKRQKENKEDFILKIGQEMVEIRRKMKSIEKNGFNNRWIGQILEVVEHNLDILKYFDGSKIDIAFENGVFLPKIEIEAILE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIA1</accession>
    <name>A0ABV2AIA1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001253</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000282">
        <property type="protein sequence ID" value="MES1919416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="103"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="118"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="128"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="481" mass="56538" checksum="89A22C2D08385187" modified="2025-10-08" version="1">MGVKFRGINGQLCIFKRSIEFRCKEKTLFLRSEKIKICRKVFSAAGSTFQALIAFDNKKGVTKRLDFFFKSESDLSVWIKKLQQTLFVLRMSSKNGSNQNKSKNYKPKSKKSKTTKVGFKEQRDKSPNCHNQQNPINFSSERPKKASAKFVNLVESGIMSKQNFSDFEKFLRNKNTKEINSPNLKFSQNFDIEILHGDLYKTNFSKFKFFAFIKFEDLFLMHQFFVCQKNGKITDQTFWDHFVRSNLFKLTNPNLNKTDKSALKQSFENDNLFSKQKITDFKKNIKSELKFPFKIDFKLNKHIGRLYRKEFSFIENETDLEKYEKSQSFFAETNRKSLFLIQSSNSDSVFSKELNFKIANFGGEKILDFSAKTKNSDERTKFVQTDSAKTKFVQIEKNFSNFKLSKNFKKQFLENYFEPINEILMLVWRDLGLKLDSDKIYRKLNFYRKGLKQTSKLGNNNIKIVIDSVILSIDKALDKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AII1</accession>
    <name>A0ABV2AII1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Band 7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001297</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000300">
        <property type="protein sequence ID" value="MES1919470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="entry name" value="Band 7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43446:SF1">
        <property type="entry name" value="BAND 7 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43446">
        <property type="entry name" value="MEMBRANE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="Band 7/SPFH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Band 7" evidence="2">
        <location>
            <begin position="73"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="19"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="312" mass="34517" checksum="AF66A62EA43DAB00" modified="2025-10-08" version="1">MSGQKKSEISIIENTGSVKKGDKTLNEEGLKEKAENSKSLKQTRESEIELGKRCCPSCLSCCLSTVCPFMWLSSCYVVNEREELVVLNFGNYLGTIKEPGLYLNNPCGTTILRTRTDNKSVDLGDVKVVDSTGSPLVISGVTTYKIVNSRSAALNVHDPHNYVLTQVINNEDYLTMFQHHPNKKALAVMKIVVSKSTYDELKINSSSIRSELVRSLQDRVFKAGVRVSNFELTDLSYAKEIAQAMLVRQQAFAMVDARKTIVENACSIADQAVKSLEKKGLVFDEQSKVRLVSNLLVTITGDANPQPTIQIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY5</accession>
    <name>A0ABV2AIY5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">GTPase-activating protein S13, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">SEC13</name>
        <name evidence="12" type="ORF">MHBO_001391</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nuclear pore complex</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the WD repeat SEC13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000332">
        <property type="protein sequence ID" value="MES1919587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037363">
        <property type="entry name" value="Sec13/Seh1_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11024">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11024:SF2">
        <property type="entry name" value="PROTEIN SEC13 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0509">mRNA transport</keyword>
    <keyword evidence="9" id="KW-0906">Nuclear pore complex</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0811">Translocation</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <keyword evidence="4 11" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="11">
        <location>
            <begin position="4"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="11">
        <location>
            <begin position="140"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="11">
        <location>
            <begin position="191"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="31287" checksum="8DCFC64E9D9ADB37" modified="2025-10-08" version="1">MEISTDHSEEINDAQFDYYGKAIATASSDKSVKIYQVGDNNINLLTTLTGHNGPVWRVSWSYPKFGKIIASCGYARQIMVWNESSPGKWDLILRDTSFEDPVNDIKFAPVTDNIFIAAVSSGGDLFSYNYDQNKWNKKAFPIHCLAANAISFSPENGEKGPRVVTGGSDGIVKFWEFDKTENLIEGKHTPRNEHSGSVTDVAWSPSTCGNKGTVASCSEDRTVKIWQNDSEWAVSATVELNLPVCSVSWSPLGDLLAATLTNGEVKMVQQTDNGEWNVKSSKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ91</accession>
    <name>A0ABV2AJ91_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001516</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000384">
        <property type="protein sequence ID" value="MES1919736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21185" checksum="AFF406C4708878DD" modified="2025-10-08" version="1">MLQKLKNLQKSSNLVKQIAVKNRKSDNKLLKQTANFTSRLRPRKILPGEASVSMSLPSSYRMTRAKQIKLIAFMSFVNLYVFARIHLRIKLEDAITKLFENDEVEALLGERPKTLSLKHRVAEADKGKVHLWVTGKLKTESGEFVDIEMEVVVVSLKMKTELVYAVLKRDNEHIYEFDKRKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG6</accession>
    <name>A0ABV2AJG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001576</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000407">
        <property type="protein sequence ID" value="MES1919811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="171"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="24234" checksum="EF129A6DBDBAC94E" modified="2025-10-08" version="1">MGQRARNRWFGNKKQNSRKLEQTRNSSSISRDENFLRKDKNLKKKKFADFESHPKRRRNKQDFDEDSVDIDDVRSLSLNTNNPNDNYEENNDIGNEKDINLDNNEKTENIAHVDDNNEDFDQIDENKDDDDSEDNDIGTTENVIVTDAEVVDPDESKSYVIREGMDILPTAGYFLFLGSLGGIIVVLLAVGVRNLLYGSGPTLVNIPSSGIYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK2</accession>
    <name>A0ABV2AJK2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">FKBP12-associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">FAP1</name>
        <name evidence="12" type="ORF">MHBO_001619</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NFX1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000426">
        <property type="protein sequence ID" value="MES1919866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06008">
        <property type="entry name" value="NF-X1-zinc-finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034078">
        <property type="entry name" value="NFX1_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000967">
        <property type="entry name" value="Znf_NFX1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12360">
        <property type="entry name" value="NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12360:SF12">
        <property type="entry name" value="TRANSCRIPTIONAL REPRESSOR NF-X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01422">
        <property type="entry name" value="zf-NF-X1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00438">
        <property type="entry name" value="ZnF_NFX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="11">
        <location>
            <begin position="24"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="221" mass="24942" checksum="0EE9CBB9FAE60AEB" modified="2025-10-08" version="1" fragment="single">MESVDKMLLNDLIKQKLEDDDYDCSICLSKIGKRAKVWSCKKCWSILHLSCIQKWAKNSSKDAFWRCPSCNSNYPAKVDVYKCFCGKSTFPEFHPFLIPHSCGQICLREKPGCPHRCILLCHPGPCPPCSFSTETKCPCGKTDVVIDCKADIKDRKTCGNICGKSKNCGVHKCEKKCHWGKCGICEKTKSIRCFCINEKREISCGDDKENIFSCGRICGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJL2</accession>
    <name>A0ABV2AJL2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Proteasome subunit alpha type-3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PSMA3_1</name>
        <name evidence="3" type="ORF">MHBO_001444</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000356">
        <property type="protein sequence ID" value="MES1919649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0647">Proteasome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="172"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="22374" checksum="FFB058FD0AEDCD8E" modified="2025-10-08" version="1">MPDVFAERQNLSIGIRRKDGQEKQFDRGGSLQGRRRVGRRKDARFILKPQPSKMTMDSSNTRIFTITDHTGMAAAGFMGDSRKIAAQARKEVSSYKKLFCTEIPAKILNDRVAGYVHSFTLKWDMRPFGASVLMASHTEDGGPQLFLIDPSGATHVLFEKLAIFRERHREKFGRGQNRAQQTRLRGENLQRSSEFAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR6</accession>
    <name>A0ABV2AJR6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein S14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001501</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000379">
        <property type="protein sequence ID" value="MES1919719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="110" mass="13527" checksum="3C89ABA4F41037FD" modified="2025-10-08" version="1">MNNRNNFEQMLWENHRKDKLRYEIAVKSLEKTEETHNMGIKKNCIKKRLKRNQRKTITNFLNFVDLSWKIDHLIRYKRFLILQNPNFLINEKGLRRSARSPTRRNNTNKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS6</accession>
    <name>A0ABV2AJS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001683</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000450">
        <property type="protein sequence ID" value="MES1919941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="247" mass="29179" checksum="D071DA8A7DE84A8D" modified="2025-10-08" version="1">MEKINDNIRINGLCVYNYYSDTENRYFLSKILKIGYKKLTIEIKQDSQIIETNWKRVYLIVPFNDDVLYSKDDNNVLERNMPVFSLWKDEKGFYNGEFYFSELFSPSNDKNKIFIRFENEVDRLIDINALVFDIKVPAVLRVVPALKSFPLKIIKRSIKNKRKKIKIGNDRINNKEIEKSETLNNETFNDIYKNEELAKISGKIEFFGLEKNANYNGDELVEHNLTDGYILQTKYVKDLRVAPFLLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJS9</accession>
    <name>A0ABV2AJS9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Casein kinase I</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001680</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the protein kinase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000448">
        <property type="protein sequence ID" value="MES1919936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14016">
        <property type="entry name" value="STKc_CK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050235">
        <property type="entry name" value="CK1_Ser-Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11909">
        <property type="entry name" value="CASEIN KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="2 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="25"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="341" mass="39774" checksum="61C378A48118A9B6" modified="2025-10-08" version="1">MNRTQIKKAKMPVFSEEELLVGNRFLVLNKIGRGSFGEIFEGVDREKNSKVAIKMESRSGKTSQLSHEYYVYRKLEGTEGIPKIFWYGNEGGYNILVIELLGRNLEQMFDKCRRRFTLKTLLMLADKMVFKCNGQLRRLEYIHKKDYVHRDIKPENFLIGPSSTGSRNLFIIDFGLAKRFRDKDTREHILYIDGKSLVGTARYASINSHMGIELSRRDDLEQLAHVLLYLNRGSLPWQGQKGRTKSEKFGKILEMKKSISITNLCKGVPDVFGKLLHYARGLRFDENPDYRYLRRMFMDVFCRHGFTSDGRFDWISEKAPSLHPQQLEIDAQEDETEDTEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU8</accession>
    <name>A0ABV2AJU8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001338</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000315">
        <property type="protein sequence ID" value="MES1919522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="11484" checksum="FC5CD8AF14621B89" modified="2025-10-08" version="1">MFCKTAITRFIAVTEVLLSDHKDYKRPGEPCSRDSDCGSWICTGICQLAFGMSEGFKGSKTSVEAILSIAKSALIFFLATVLVLLSTKACCPARGLCCCSCRCKRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKA5</accession>
    <name>A0ABV2AKA5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Palmitoyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.225</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001790</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="7">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000500">
        <property type="protein sequence ID" value="MES1920067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039859">
        <property type="entry name" value="PFA4/ZDH16/20/ERF2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883:SF203">
        <property type="entry name" value="PALMITOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883">
        <property type="entry name" value="ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="8">
        <location>
            <begin position="48"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22288" checksum="D1D87201C53FD9BA" modified="2025-10-08" version="1">MTTFGTTWMATSMNVADEHLLKRGFPDPFSEFNLSSFELEHRRDQIESNKTKWCDYCRWNVGLDTKHCRECDRCTEHFDHHCKWLNNCVSRKNYKWFCTSAISALLMLLFSFGTSIFGFVVSFTSKDEWENLLGMSLLTYQILVFVNMVMTLVLMTSLIYLLSFHIFLSTKRMTTYEYILSQRCIFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE7</accession>
    <name>A0ABV2AKE7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PurM-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001701</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000460">
        <property type="protein sequence ID" value="MES1919959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="entry name" value="PurM-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004536">
        <property type="entry name" value="SPS/SelD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10256:SF0">
        <property type="entry name" value="INACTIVE SELENIDE, WATER DIKINASE-LIKE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10256">
        <property type="entry name" value="SELENIDE, WATER DIKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="PurM N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PurM-like N-terminal" evidence="3">
        <location>
            <begin position="4"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="8785" checksum="1ECBDEF30454D58C" modified="2025-10-08" version="1">MVTLSTTDFFFPLVDDPYRQGGIAAANVLSDLYSLGVRHVDTVLMSLALSLEMDVVVRKKVAALMIEGFNDKCKEAGKDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG2</accession>
    <name>A0ABV2AKG2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pre-mRNA-splicing factor cwc26</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CWC26</name>
        <name evidence="3" type="ORF">MHBO_001711</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CWC26 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000465">
        <property type="protein sequence ID" value="MES1919974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018609">
        <property type="entry name" value="Bud13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051112">
        <property type="entry name" value="CWC26_splicing_factor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31809">
        <property type="entry name" value="BUD13 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31809:SF0">
        <property type="entry name" value="BUD13 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09736">
        <property type="entry name" value="Bud13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="7"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="39"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="89"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="110"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="127"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="137"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="263" mass="30554" checksum="91961B3E888BA94E" modified="2025-10-08" version="1" fragment="single">MPIAPKILKRYSSKKKHRRKGENIVADLDEIPNHETKTDPSATKITTDNTANPKDRQITFIPMNDGSGWVNIKAEKDDSTFRQTAKNSPKIEKVAKRHDSDVSENSDVDSNSKSEIFDGPKNKTDVSSDEESELDFDAQKPKLPEKKERPRYKKSNMSRLLKEDDPDLAGMVWGKGYVQHQKEKTDKEELKKMAEKPFSRTIEDEELNLFLRNKRRWGDPMSKNKIRKKIKTGKTDRPICRYRFPNRYNIAPGYRWDGIDRSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP1</accession>
    <name>A0ABV2AKP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein phosphatase 2A structural subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">TPD3</name>
        <name evidence="2" type="ORF">MHBO_001951</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000575">
        <property type="protein sequence ID" value="MES1920261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000357">
        <property type="entry name" value="HEAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051023">
        <property type="entry name" value="PP2A_Regulatory_Subunit_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648:SF4">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02985">
        <property type="entry name" value="HEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="439" mass="50358" checksum="52B9BE88205BC424" modified="2025-10-08" version="1">MDGKMDKKGKWLSEKMSFLKGETIGEKIEGINCFPRLAAFLGPVKTTEILIPLIVSIVDEDEALIESFSKIIEDIPEIFDSEDFNANYVCKIGNLCFSDNNLIRSRSVKSILKILDKSGKAGNESFAQQILFVYDKNDAPIIKIAMCEMAPKLHRKIVKFQIDSVKIDVYDIFSFCCQHDDSSVRKHSILTIDGFLDELKEYDDFVSKFEKLLFDSCDLVQMAAIEVFRDILAILMNTQNAEKWSEFAKIKIESLIKSDSWRIRRKVCDNFCRWTRLLSNFDIKNFVIKSFLDFSDDAENEVVFSAASNIVNFAKFVDDKQVEKEFLGAFKNIVAIGHKDTLIAAVANLSALLKLVSADFSKNDCEEIFQTILNLEDEISIVFIMNLDKLENFSLIEDFATKLNTKFLDLLKNPNWRIRMKAAQYLCEFLKILVFDFSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKP6</accession>
    <name>A0ABV2AKP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001928</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000564">
        <property type="protein sequence ID" value="MES1920237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="18571" checksum="17BA578BDF16CCE8" modified="2025-10-08" version="1">MLLIDRLNEISNKDLKSSEDGMSEDSFRKETKNLENKIKFLREQTDLILNLKNQFSQKYTTTDQNIILKKFKDVYLRGRSSHNTQFDKIQQIKNSRESDYDRYKKNVLEILQKEFSAVYKTFFETVDTTNQFFTETLSFQSIYCNFLNLSGRGKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKR0</accession>
    <name>A0ABV2AKR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001956</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000578">
        <property type="protein sequence ID" value="MES1920268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="26252" checksum="87335E7D30E69A66" modified="2025-10-08" version="1">MSFLDKAPYQIIKILEKNGLITINTDKLALTYNELDKFREGIDVILRHVRISLFEPEIKGMSEEELDKYFPFDLDLTSTRKPTFRDNVHFFKMPFRDNILNKAIYSYNEKIFKNAAEKELEKIHFKFYYFLNKKVKIEDGNFIGEYNLQICDGKKSFVLHEKFLAKNGKILKFKKILNCHSIIFLFIFLFSIRFIVQSFVSIFLHFFHFICQSFKRTFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKS3</accession>
    <name>A0ABV2AKS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Actin binding</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">EHBP1</name>
        <name evidence="2" type="ORF">MHBO_001952</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000576">
        <property type="protein sequence ID" value="MES1920263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="1">
        <location>
            <begin position="53"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="24691" checksum="FF2AF80718C17D14" modified="2025-10-08" version="1" fragment="single">FSANRLEDLNQWSKLTEDALKRKLKLVEQILTCSKLNSLSLFEVENLHKNYSKHFDSKKNGYLDKKALNQCLSDLGADFDDSEIDDIFDKNGVRSKKTPNLKLLSFKKFSDFFNRAGSVRSRRKILESFANLNNGVPFVTKRQLATKLSLNDLNFVENEIKMATDNNEKLFFSKWIEKVFEGEPKERTATNLENRKEKTIKKLFLKKRKSVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT5</accession>
    <name>A0ABV2AKT5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001989</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000602">
        <property type="protein sequence ID" value="MES1920306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10106" checksum="AB02A67E56DC41B9" modified="2025-10-08" version="1">MRPHCRGNVSTTKIRFILIWNIQSNNKTPNKQESIGAKQTTQIPKTTEDGNNDLRSITKKEKAKTPITTETNTNAFCNFFILPSVKIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL12</accession>
    <name>A0ABV2AL12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">tRNA (Cytidine(32)/guanosine(34)-2'-O)-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">FTSJ1</name>
        <name evidence="5" type="ORF">MHBO_001855</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000529">
        <property type="protein sequence ID" value="MES1920144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01547">
        <property type="entry name" value="RNA_methyltr_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050082">
        <property type="entry name" value="RNA_methyltr_RlmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015507">
        <property type="entry name" value="rRNA-MeTfrase_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10920">
        <property type="entry name" value="RIBOSOMAL RNA METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10920:SF12">
        <property type="entry name" value="TRNA (CYTIDINE(32)_GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Ribosomal RNA methyltransferase FtsJ" evidence="4">
        <location>
            <begin position="21"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="29837" checksum="330B23E589C9271F" modified="2025-10-08" version="1">MGKYSKDRRDIFYRRAKEKGYRARSSFKLIQIDHHFGILKNCRRAVDLCAAPGGWSQVLSDSLSGLGENEGKIIAVDLQSIAPINGVRMLKADITDPKTHAQIVKAFDGQKADLVLSDGAPDATGLDDMDYYVQNELVLSALKLAVQILENGGTFLAKIFRGKHINCVVSVCKELFENVCIAKPTASRNYSIEAFVLCQNYKIFAKTPKIDKIFNKLRENSNRNLDSFCKFINCKGPSELENLDSDKNYNLVDVAAGSCLQGIYRAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALB8</accession>
    <name>A0ABV2ALB8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000689">
        <property type="protein sequence ID" value="MES1920475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="176" mass="20556" checksum="DA92CA40874B91A1" modified="2025-10-08" version="1" fragment="single">MDAKKSKKQHFKKQNLSLKSQLDNPKILQKLQKQQIVHREEIPLEKKAPLFLHLPQYNSSNQIIAHAAKYKDVVPEGIVRFCVHRSKQIWKESEQNIIELFSAIKIFFSNYKPLETAQQGIKTDLEIKTNFIIQFVSDCIGISIAFYILLGHFVQQSNCIDFSIFVVINKDNFQFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD7</accession>
    <name>A0ABV2ALD7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Elongator complex protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ELP1</name>
        <name evidence="2" type="ORF">MHBO_001904</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000552">
        <property type="protein sequence ID" value="MES1920213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056164">
        <property type="entry name" value="Beta-prop_ELP1_1st"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006849">
        <property type="entry name" value="Elp1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12747">
        <property type="entry name" value="ELONGATOR COMPLEX PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12747:SF0">
        <property type="entry name" value="ELONGATOR COMPLEX PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04762">
        <property type="entry name" value="Beta-prop_ELP1_1st"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69322">
        <property type="entry name" value="Tricorn protease domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ELP1 first N-terminal beta-propeller" evidence="1">
        <location>
            <begin position="1"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="ELP1 first N-terminal beta-propeller" evidence="1">
        <location>
            <begin position="179"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="516" mass="58154" checksum="45C36450F3822BE7" modified="2025-10-08" version="1">MKNLFIRFSKKVDLKISDSDQKSLCFDRSSKKTFVVSVNKSPVKMTFYVVSDFFSEENIKTKMFSFSERDFSPESAKLVRSDYGIASFDYLRESESLCIVFKNGIISSFGIYDESFKEVGVLKEKDGASVFPLCAIWDAEKTVLSILSSNGKISFLSSGFETILETDLKLTEESDSSIESASMRWRRNGDLLAINFRESGSNKGRIVVLDRKGDVVSKSKSFFAGSICSSVDWNTDTNLINVVGNDFGISKSGANKTILFFERNGLPHGKMSLSPIFDDFDQICLNFNAFSDILAVSAKNKIAFYSCRNYFWYLKKVLTFDHFVETAIWTNSGEICVLLKNGALSVIRMSARFSLSSQNSLAVVNAAEVNISNLGKGTIPPPLCHSKIKIGSECAKDVIFKEKSEEILILNSENKAISYQIDKNNFHEKIENELKSDFRKFLVYKNGIFLYLNDENRVFAVLTGAEPKTKRILDFGVVDAKYNEQNGNFSKKRFCLFPNTEKRLLQIKVVDNPSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM3</accession>
    <name>A0ABV2ALM3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tyrosine-protein kinase ephrin type A/B receptor-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001903</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000551">
        <property type="protein sequence ID" value="MES1920212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009030">
        <property type="entry name" value="Growth_fac_rcpt_cys_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM01411">
        <property type="entry name" value="Ephrin_rec_like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57184">
        <property type="entry name" value="Growth factor receptor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="146" mass="16500" checksum="35118CBE43804FAA" modified="2025-10-08" version="1" fragment="single">LCEGSNYAIDLGKECGNCRNQSFYDKEQRDCVYCEGNFAFDLDTFKCVECEEGTFSIDNGKRCAVCPDNTLYNSFTRSCIECKGNSVPDSKLNKCVSCEEGQYPLERGTLCGNCGEGDFYNEELKVCNRCENEFIFEEGLGCSFYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY1</accession>
    <name>A0ABV2ALY1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tetrapyrrole biosynthesis uroporphyrinogen III synthase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002333</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000807">
        <property type="protein sequence ID" value="MES1920687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06578">
        <property type="entry name" value="HemD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10090">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036108">
        <property type="entry name" value="4pyrrol_syn_uPrphyn_synt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003754">
        <property type="entry name" value="4pyrrol_synth_uPrphyn_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039793">
        <property type="entry name" value="UROS/Hem4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12390">
        <property type="entry name" value="UROPORPHYRINOGEN III SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12390:SF0">
        <property type="entry name" value="UROPORPHYRINOGEN-III SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02602">
        <property type="entry name" value="HEM4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69618">
        <property type="entry name" value="HemD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tetrapyrrole biosynthesis uroporphyrinogen III synthase" evidence="1">
        <location>
            <begin position="14"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28883" checksum="FE1A7DF4D14556B4" modified="2025-10-08" version="1">MGKVVLFKDFDLEYQNRFREKGFETLFVPVIKFEFVNQKIIIRFTQQSPSNFAGVIITSSTSLDAINKICQMDNKSKKFFENVKFFSVGEKSVKKAKLLKTNVQFDKSYFKNSEELAENVLLKYRSDPQKQFLILSSNIRRQNLTEKLIAANINFVEITAYKTLSQPNLTQKILSLKNNSQFQAKFVVFFSPSGLNAVLASFPDFFRIFDCFKIVAIGDTTAQALISRNIRLDAVSSMPKPESLVETLLNFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM05</accession>
    <name>A0ABV2AM05_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cation-transporting P-type ATPase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002192</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000722">
        <property type="protein sequence ID" value="MES1920529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006068">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050510">
        <property type="entry name" value="Cation_transp_ATPase_P-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43294:SF21">
        <property type="entry name" value="CATION TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43294">
        <property type="entry name" value="SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00689">
        <property type="entry name" value="Cation_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="37"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="157"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Cation-transporting P-type ATPase C-terminal" evidence="4">
        <location>
            <begin position="1"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="27032" checksum="3D7E6B65012703C3" modified="2025-10-08" version="1">MIPAISMAYEKKEADIMKQPPRNPKTERLVTKSLVSFSYLLVGIFQMLAGMFTYFVVYLFAGFELKQVINLDRNDQFLNCDVADKYLTCSTAKDFSGNYCIYSANPLATRLAKYTVFNMDCNQREIVSDTANASYVLSIIIVQVADVMISKTRRNSVFLQGMGNLIMNIGIAIEFLAISFLIYTPKVNRALSFNNVSVLFWVPPLPFFMGIFGLDEMRKLLIRKDFNGWVKRNTYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM34</accession>
    <name>A0ABV2AM34_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002361</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000822">
        <property type="protein sequence ID" value="MES1920721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379:SF127">
        <property type="entry name" value="BLOODY FINGERS-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24379">
        <property type="entry name" value="KRAB AND ZINC FINGER DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="101"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="6">
        <location>
            <begin position="129"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="26564" checksum="38C64C20325281EE" modified="2025-10-08" version="1">MASKPKKARIKNSGKAFICDFCDSSFPNLRKLNIHRNRPNSHRFRCLRCPKKFVFRKKLTMHIQNAHLSYFGKADKAFRAAKAIVAETREIADSTKKFFPFLCEFCLKRFSNKSELDRHTDTHTGHKQFKCDMCPKSFSQESNLNRHRNVHMGVKPHVCAKCKVAYTDKSSLYKHQAKGDCALRYSSGFFPLEKMSLEQRETNDLFSEKTFTSDFCSYWASLRHFYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM94</accession>
    <name>A0ABV2AM94_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002426</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000865">
        <property type="protein sequence ID" value="MES1920791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05684">
        <property type="entry name" value="S1_DHX8_helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002464">
        <property type="entry name" value="DNA/RNA_helicase_DEAH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049621">
        <property type="entry name" value="S1_DHX8_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF85">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00690">
        <property type="entry name" value="DEAH_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="2" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="4">
        <location>
            <begin position="74"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="5">
        <location>
            <begin position="373"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="181"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="38"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="500"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="500" mass="57337" checksum="DDE64ECDD2FA041A" modified="2025-10-08" version="1" fragment="single">MMPSNSKTNIKKTKKSKQDNKSFPGLSIANTAPIPAITKEEKKEIDRKRYRKRKETEKKISRKFSKRNRKIELNEVYEGTVSSIKEFGFFVRLKNTRERRCEGLVHISMIRPGRVNNVHSEIKRNEKVFVKIISLNHNKIGLSMRLIDQNTGEDNSGNFQMVDNVEERIKKRAQLEERRKLEDKYTKSRKKRRISSPERWELSQLRNSGAVVENPDNEANKEIEDDEEEFSDAEQMLDIEVNDEEPPFLQNQTERSVRLSPIRVAKNPDGSLSRAALTQSALAKERRELREQALKASNDSAPVDIARSWEDPMAPSGERYLAQQLRSAGRKEEIPAWRRQQLGRNMSYGRVTNKSIREQREALPIFKLKRDLMGAIESNDIIVVIGATGSGKTTQMTQYLVEAGYGGKGRIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYAIRFEDCTSADTVIKYMTDGMLLREALLEKNLKDYSVIILDEAHERTIHTDVLFGLMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM98</accession>
    <name>A0ABV2AM98_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GPI mannosyltransferase 2</fullName>
            <ecNumber evidence="11">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">GPI18</name>
        <name evidence="12" type="ORF">MHBO_002389</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Endoplasmic reticulum membrane</location>
            <topology evidence="1 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the PIGV family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="11"/>
    <dbReference type="EMBL" id="JBDODL010000842">
        <property type="protein sequence ID" value="MES1920750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007315">
        <property type="entry name" value="PIG-V/Gpi18"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12468">
        <property type="entry name" value="GPI MANNOSYLTRANSFERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12468:SF2">
        <property type="entry name" value="GPI MANNOSYLTRANSFERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04188">
        <property type="entry name" value="Mannosyl_trans2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4 11" id="KW-0337">GPI-anchor biosynthesis</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="106"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="150"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="189"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="231"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="299"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="355"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU363112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="405" mass="47600" checksum="6DB46D6F6733790C" modified="2025-10-08" version="1">MSGSKIGRRLITISLLSILAVNFIAFVAYALVQKELSADAFKNESFYRTNFGKTFKFLSNWDGHYFLAIAERGYEEPSHHAFFPLYPLLIRFSASFLSFGLKNFDFFSLLLVSSLIISNTMFLLSVLAFYKLTICVFKDRPKFALKSSFLYSFNFARIFMSATYSESLFAFMSMTAFRLHLEKDELKAVGLFFLCTFVRSNGILFSGFYFFRFVRDFLLKRTIDTTRALKYLIFGFFIISPYFLWNFCGYKKYCSSEEDFARNEFCSEINFIQFYSFLQSKYWNVGFLKFYKLSQIPNFLLAAPVLFFSAYSIFLYSNKNWQNFVSIGFFDGSKKSLERSVENILFSSKLLVFHYYWSILCFIAIFVMNVQVLKVCRKGVFEVHVDFSSRLLVFVLFYKLQPIFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM99</accession>
    <name>A0ABV2AM99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Sec16 Sec23-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002436</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the WD repeat SEC31 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000871">
        <property type="protein sequence ID" value="MES1920801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.1030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024298">
        <property type="entry name" value="Sec16_Sec23-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040251">
        <property type="entry name" value="SEC31-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13923">
        <property type="entry name" value="SEC31-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13923:SF11">
        <property type="entry name" value="SECRETORY 31, ISOFORM D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12931">
        <property type="entry name" value="TPR_Sec16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <keyword evidence="4 9" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="9">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="9">
        <location>
            <begin position="43"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="Sec16 Sec23-binding" evidence="11">
        <location>
            <begin position="315"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="240"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="247"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="497" mass="55568" checksum="2750AFE5A76EBB4C" modified="2025-10-08" version="1" fragment="single">NSAAIKAVAWNPLKALHIATASYSQNAELWDLRNSHSPRTVLENGHENPLAGIDWNEHDARLIVTADEEGVVCLWSEQGSLLHSKNNNGKILGVRWSPGLPSYYALSLAEDVTINSVQFAGDDFVPTWLNKTAGSKFSQFGNLLTFHNVYKNENVFEKSILTVKALQNGTDISKEAKELDKIITEKKFAVFCQKKSELGDDEQEITFWNFVKALYSPNRNNEFLRQLGFAKAFKSNDQQQNAQKSVLETEKPVLREEKTSLNDENESFDEAAFFDKIAARSDSEVGERVGVESKNFVESESESSEESEEESFSDIKDYLVTGNFEVAAKLCLESGNFAEALIIASCSSEIWEKTQNEYLTKHSKGFMKNVMSLVMNDRVDELVKKSKLANWKQTIALVLVYANDDEKSQHFNTFANRLENAGKPFEALLCFVCAGNTSEIINKLFKNSNSEASKLQDLVEKAFLCSFATNSGLEESTQKVLAQYVKTLLAGGNRDLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD1</accession>
    <name>A0ABV2AMD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein phosphatase 2, regulatory subunit A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PPP2R1B</name>
        <name evidence="2" type="ORF">MHBO_002461</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000896">
        <property type="protein sequence ID" value="MES1920831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051023">
        <property type="entry name" value="PP2A_Regulatory_Subunit_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648:SF4">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="302" mass="35454" checksum="26D5C2C798EF0C6D" modified="2025-10-08" version="1">MKKDKKGKLTECFLKLLEDEEEQVSISAIKQIVDLFSITGDDFFEFKENIYNRLKLAAENQQFSVMNNVISEQLGDLVKVETKFSQEILDLIKIYLNSDQEILVVNILSKSNLLLNKMGYQNFVAHFNEPLLKISDSSNWRFRLSALKTISLLSEKLVFGNKNLKITTKKTETEFEQFIKTLEKLLEDETQKIREESCLMSWKLLKKFGFEWSSKNVLPFIRDLSDVQRYLHRMTPLFFLFQIEEKVDDRMNDFVIKIFKKLLNDRISNVKDFALRVVDKISPFLNTEIAALVFEESKSARQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG9</accession>
    <name>A0ABV2AMG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002244</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000753">
        <property type="protein sequence ID" value="MES1920588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1410.10">
        <property type="entry name" value="set domain protein methyltransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="285" mass="32994" checksum="56F8751044AAB330" modified="2025-10-08" version="1" fragment="single">MLRFSGFLRNCSVLNFYTQSKNRITNLNISAFCTSATKVLNSQSHEKSTEYILKWISENGGMFLDRIGLMPNGIFAATKIRAGSNVFAVPSELAFIRENLTGEFKSKLNCELARHLPWPNESRRHEIYPFFCYPEAKEEFYEKRLIRIRERAIVALCLMYENSIGPKSDWAPWLSLLPLPPSQTAEPTFIGGPTLPYHYLEVLKGTQAFRQIINMKIDFDGVWIWVNNILKKLPAKITSKRFKREDFDHFMMIAGQQYFMNPPLIDFAQHAMTNKMCNVAKIIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AML7</accession>
    <name>A0ABV2AML7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Lactate/malate dehydrogenase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002509</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LDH/MDH superfamily. MDH type 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000934">
        <property type="protein sequence ID" value="MES1920892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010945">
        <property type="entry name" value="Malate_DH_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23382">
        <property type="entry name" value="MALATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactate/malate dehydrogenase N-terminal" evidence="3">
        <location>
            <begin position="60"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="26312" checksum="C72AE85210C12272" modified="2025-10-08" version="1" fragment="single">MLRGVKLAQLKPKIGFLQKRNFRSDFAGVSGFSRFMLHKDPYYEQRVKEYTEPKKPAITVSVTGAAGHIGYALLFRIASGQMFGPNQPVYINAIELPFVLSKLRGVEMELKDCAFPLLKGIKCTDKYEEGFANTNYAILVGSKPRGPNQERSDLIKDNGVIFQGIGRSLNKHANTNCKVFVVGNPANTNCLICAHNAPDLDRKNFTAMMRLDHDRGLAMAADKVGQDPQHLTEYFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMP2</accession>
    <name>A0ABV2AMP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000970">
        <property type="protein sequence ID" value="MES1920940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="235"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29761" checksum="A3EFF241AE1D7C07" modified="2025-10-08" version="1">MAYFVHKDYFIERIVFVFLFSCLLFYFLVLIIVKTLMSRGRLQSIFNFRKISNLSKVLGLFSSLAFILYEIDPLGFFRIYIPKTALLVNDLAVAMIVVYYIFFSIVAYSIYKKSELHELSPFAAKMLVGLPLLYMLLILIANFANFYLGTWHFKYVAVFSLNSAISFVCTVFMIIMFFHSAHHLKTIKFTKFARLAVFVLLNIIANIMLFVKYVICAVNFVKIEHFVSKDYNYYNVYNSTLYFLILVSFAVFGTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV7</accession>
    <name>A0ABV2AMV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002606</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001010">
        <property type="protein sequence ID" value="MES1921001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="10280" checksum="E699212A2428D502" modified="2025-10-08" version="1">MECCGGSCRPSFKSGPNCPVLHLTWRKTMQSFYSYLYLGQLNLSIHSSTIDNALKSIWEAALLKKLIPGTQLRKGIATSVHLITHKKIYRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMX4</accession>
    <name>A0ABV2AMX4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RNA polymerase sigma factor 70 region 4 type 2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002601</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001008">
        <property type="protein sequence ID" value="MES1920997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="RNA POLYMERASE ECF-TYPE SIGMA FACTO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133:SF51">
        <property type="entry name" value="RNA POLYMERASE SIGMA FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="Sigma2 domain of RNA polymerase sigma factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="Sigma3 and sigma4 domains of RNA polymerase sigma factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA polymerase sigma factor 70 region 4 type 2" evidence="5">
        <location>
            <begin position="131"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="23212" checksum="D4ECB64E9E49BACA" modified="2025-10-08" version="1">MKQTEIYLLIEDAKKGKQVAFTKLYEQYKNLAFYVARKYLRNSDAVSEAVNIGMSYFFRNINDVKEDSNVMNFVWHHIKYASMDYHRRERTHENHYSDTHNDEDFYLETFIDSSESALDSIMVKEKSNMAISAIEKLDSVRKELITLKYLQEYSNDEIAEIYGKTKWTVKGHLAKGRESLRNILNEQVIREYYSVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN06</accession>
    <name>A0ABV2AN06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP-dependent DNA helicase</fullName>
            <ecNumber evidence="1">5.6.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PIF1</name>
        <name evidence="3" type="ORF">MHBO_002645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="5.6.2.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.3" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001049">
        <property type="protein sequence ID" value="MES1921047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010285">
        <property type="entry name" value="DNA_helicase_pif1-like_DEAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051055">
        <property type="entry name" value="PIF1_helicase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47642">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47642:SF5">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05970">
        <property type="entry name" value="PIF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 3" id="KW-0347">Helicase</keyword>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA helicase Pif1-like DEAD-box helicase" evidence="2">
        <location>
            <begin position="33"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16334" checksum="F36F2F95BC881E35" modified="2025-10-08" version="1">MALSTPFKRPRRIEHKKDGKMAEIGQKLKNLVLSDQQKNVLKQVVEGKNVFFTGCAGTGKSVLIKEIHAVLKQRKLKVHVTASTGLAAFNLNGRTLHSWAGIGFGKGQPEKLVKNIRKKREVYSRWMSTKILIIDEVLNGNLRFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE6</accession>
    <name>A0ABV2ANE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002625</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001026">
        <property type="protein sequence ID" value="MES1921024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="162"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="56"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="22025" checksum="B5CC5956A0304BE3" modified="2025-10-08" version="1" fragment="single">KKHKNDLLAKYAKNSQKYELILLKIKSIFSNYSDFDLFFDKYLILDKNSTFLSKNNLFLKQQIEEMKNLISEVKMENLNYKEKFAKQMSEIELKNGENKTLKNNLFVATENLKLLNDFLRTFETDKNSENLGKLVLEIKKFCEKVQNFDKKEIVKISNFSEDSSEDTEKTGQKWSQEIDSDSVICVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG9</accession>
    <name>A0ABV2ANG9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phospholipid-transporting ATPase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002751</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001133">
        <property type="protein sequence ID" value="MES1921183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF19">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="211" mass="24295" checksum="F8629BD43F2E9177" modified="2025-10-08" version="1">MLKIKNLQSSKFDKKEFSKKGLRILVCAYKEITDLEYKNWNDRFQTAKLHFDSQFQIDNLIDEMESDLELIGSTAVDDKLQDEVSSTLDCFKKAGIGIWILTGDKLQTALNIAKSCGLLTLKMLCRPNLVVLELKEDVSDEDGRSIIKSKIELAKEEICQKRGDFEDQALVITGRVLNIVFPKKKKMARFDDLQKLVFKIKRFFCCREKDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH5</accession>
    <name>A0ABV2ANH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Williams Beuren syndrome chromosome region 22 protein</fullName>
            <ecNumber evidence="12">2.1.1.309</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">WBSCR22</name>
        <name evidence="12" type="ORF">MHBO_002492</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class I-like SAM-binding methyltransferase superfamily. BUD23/WBSCR22 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.309" evidence="12"/>
    <dbReference type="EMBL" id="JBDODL010000922">
        <property type="protein sequence ID" value="MES1920872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039769">
        <property type="entry name" value="Bud23-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022238">
        <property type="entry name" value="Bud23_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12734:SF0">
        <property type="entry name" value="18S RRNA (GUANINE-N(7))-METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12734">
        <property type="entry name" value="METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12589">
        <property type="entry name" value="WBS_methylT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 12" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransferase type 11" evidence="10">
        <location>
            <begin position="55"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23 C-terminal" evidence="11">
        <location>
            <begin position="225"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="237"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="238"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="276" mass="31978" checksum="5387EF1A04D63885" modified="2025-10-08" version="1">MPKKPELTSPPEYYYNQERSKDYTKNSRIYKIQREMSERAFELMQLNLETPNVVLDIGCGSGLSGEILRDKNCYWIGTDISTSMLDICRERHLNPEISLADMGHGLPFRENFFDGCISVSALQWICNASTSKQNPLHRIRTLFDSLYRCMKPGAWAVFQFYPENKKQLDLLTRFPAKSGFSGGLVVDFPESKKAKKFYLCLKAGEFMKTSLSENVKGQNSRDGLEHRSLSQFAEFTKRKTRKQKRIKSNLIAKKDRLRRKGIKLSKDSKYSGRKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANL2</accession>
    <name>A0ABV2ANL2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002584</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000995">
        <property type="protein sequence ID" value="MES1920978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056802">
        <property type="entry name" value="ATR-like_M-HEAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003151">
        <property type="entry name" value="PIK-rel_kinase_FAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014009">
        <property type="entry name" value="PIK_FAT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02259">
        <property type="entry name" value="FAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25030">
        <property type="entry name" value="M-HEAT_ATR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51189">
        <property type="entry name" value="FAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FAT" evidence="10">
        <location>
            <begin position="326"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="587"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="587" mass="67936" checksum="9B67D27A3C941A3F" modified="2025-10-08" version="1" fragment="single">MQSLLRCNENDLIVEAAGKCIGALGAYSPSMLFLKEGNVCNGDDEKADSLEIECTFEFLLLQILDRFLTKALLQSPNRNLLINVREFLDVLAINLNRIKVENVKRKRTKQTEKWSALSKLSRDALKTHKSNLLPKISTRKSKIASGDNENFLSQNDSFESHNQNENFIKFEEEKTIFQKSPNYEIWICSFCLQILDFLQNFLPKNIQKINWILALKNLLRNSTLPHKNLSNIASFALPKIFFDLIKESDDDFVIFKIKREIFSVLNLLSRDSADSKSCKTRRCVSALFDLFRKLENWTEVNSTKRDFASDKIKTALSRIFDSGFSLLPHAAILCKAYPEALRLIERSRRLESDPKPQIWDLLHKCYGKQGEIEMVSAVERSGKFLSLHKTARGYELRGQWLDAINRYEQLLQENGNCGKSRKGLLRCLVKMGHFRSVLKQIKGENAKMSEAKNFDWGVYKYGVQAAWRLQQWEELKELVTRTKGAQINNFEYSVGKILSAATARSDIVASLLRNSRLEEMRQAQNLFSQSYQRAYAHVSRMAMLHELEQICAFEDENRVFEHKVEIMDKDFVFKEPLLSLRRVFYGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP1</accession>
    <name>A0ABV2ANP1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Trafficking protein particle complex subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002836</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001216">
        <property type="protein sequence ID" value="MES1921286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007233">
        <property type="entry name" value="TRAPPC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04099">
        <property type="entry name" value="Sybindin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="6" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="134" mass="15452" checksum="FC0A078052D10D5A" modified="2025-10-08" version="1">MDKIYYIKIFEKEKCVFTKKSDSFKSKKPQSHFDDLLYGVITSLKIFSNRVSYSRNKFNSIRLISAENYCVGILESLTGLLFVIAFKHSLPEVIAYNILDQIYTSFVIKLKVNPLASEAKSVFTESVDEIINKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR0</accession>
    <name>A0ABV2ANR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Endothelin-converting enzyme 2</fullName>
            <ecNumber evidence="3">3.4.24.71</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ECE2</name>
        <name evidence="3" type="ORF">MHBO_002720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.71" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001108">
        <property type="protein sequence ID" value="MES1921144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="entry name" value="Collagenase (Catalytic Domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1380.10">
        <property type="entry name" value="Neutral endopeptidase , domain2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000718">
        <property type="entry name" value="Peptidase_M13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018497">
        <property type="entry name" value="Peptidase_M13_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042089">
        <property type="entry name" value="Peptidase_M13_dom_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11733:SF167">
        <property type="entry name" value="FI17812P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11733">
        <property type="entry name" value="ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01431">
        <property type="entry name" value="Peptidase_M13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55486">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51885">
        <property type="entry name" value="NEPRILYSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M13 C-terminal" evidence="2">
        <location>
            <begin position="93"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="298" mass="34131" checksum="834EB7C98A677D48" modified="2025-10-08" version="1">MIESIKNFDWMGNNTKKQTIEKIKTIKSVIGISKDDKNDEFLNKFYADIKIGSTFIETLMEAKSFNTKLMFRSLFLKHGVDDMLAHTLTNEANASYDLRFNMMNMNPGIFRLPFFAKNATDVELFGQLGYIVSHEFTHALGPNGMRFDKEGNFNKKNEDGSLENYNKKIEAVHEKVDRICAKTVRNKKTGEKENFTPVFANVAGEIMADLGGVNYSFKAFVLHRGGNVTRSERIKFFKSTALLFCQKESDEKLLKSASGILHPPEYCRVNVISHTRLFEGINRCRRKNSDLTIEMWSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV7</accession>
    <name>A0ABV2ANV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002892</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001276">
        <property type="protein sequence ID" value="MES1921358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043136">
        <property type="entry name" value="B30.2/SPRY_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="571"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="571" mass="65914" checksum="89CD8197A8DF3253" modified="2025-10-08" version="1" fragment="single">TAVQNFNISQGLFPALSLSQNQKITVIFDPSNFIQAPPNGYYPLQNDSAFDPANPQICRFYEQCISSDLENFGYSVLYQGHLSDCRNFCEKFAKEKNNIISIEKTRRLFENKNKKIIWTGKSATLVKSEFSDLFVYLLNSTDKLSKEAVEAISKPFFANNCDRKKFNLKKNLLAALKILSGDNKSLRAGSSVQINRKGISLEGTILEMKDQFPKCPIFIERNRNVKTELVLRRSSSSPLIQNISMANFDNSENVQFIDLKSLTPQNGEKINFDRFEKDVLAQILRKMADILADFSDEEPILSKDETDNGRILEKRTNLENRNFEETARMCTQKIKNLNKIKKMDLMLIKLSKSFYKDEQIQIVLEILAIKCLIGNFGPIFADENKKMAQKVASNFLFSLKNFFEEKLAKFYKNFVDFKKIVLANFGKTCAKILEKLNFSDKNGENVDSKNEEFEKNQKLVKSLKQFFDFLVKEIETKFDGIFNEIDSVQGDFDVVKKLKIEDDLDFGQIKSIEKMIKIQCKTTLSEIFSILPNIDENLFEHIFCLLLKQNKFVEIGNLQILKEKMENRLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY1</accession>
    <name>A0ABV2ANY1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002782</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001165">
        <property type="protein sequence ID" value="MES1921219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045924640" description="Secreted protein" evidence="1">
        <location>
            <begin position="20"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="67" mass="7540" checksum="F883D723CA04EBEE" modified="2025-10-08" version="1">MPLLDLALGVIILITKVDALVLLECVLECDIEEQECLSRKRKRRGDQKDAVNMSGNHCGVLLKKMEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANY8</accession>
    <name>A0ABV2ANY8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002912</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001294">
        <property type="protein sequence ID" value="MES1921378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15111" checksum="1B72A52B69CAE4FE" modified="2025-10-08" version="1">MSLNFEFNLPSTLINLKEDIIAMKERMDTLAEEIDEDTAAEFPCEESPSKVLDKLAQIEVSIPQFFEQIRNLEEDKKKLLETFFETVNENKVLIQELLSVCNLPSKSENSELVEDVIKSCQFLFSKNLSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP02</accession>
    <name>A0ABV2AP02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002924</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001305">
        <property type="protein sequence ID" value="MES1921393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17540" checksum="D9075A91B286011E" modified="2025-10-08" version="1">MLKLNLIAESITSTISKLSAMFLKSAQTKSPIIIFVNKSVLLPTPKTIENGQNAFCHFWLINNKRKHCHFWLNFTNILQCLVEEKRFENDFETGKICVLKDINSKIKEKEVLVKIKENLVKLFEGNGVKRMEEIVEKIVLGICEEVGVKFDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP09</accession>
    <name>A0ABV2AP09_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dedicator of cytokinesis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">DOCK4</name>
        <name evidence="3" type="ORF">MHBO_002926</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DOCK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001306">
        <property type="protein sequence ID" value="MES1921395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027007">
        <property type="entry name" value="C2_DOCK-type_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026791">
        <property type="entry name" value="DOCK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45653">
        <property type="entry name" value="DEDICATOR OF CYTOKINESIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45653:SF10">
        <property type="entry name" value="MYOBLAST CITY, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14429">
        <property type="entry name" value="DOCK-C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51650">
        <property type="entry name" value="C2_DOCK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2 DOCK-type" evidence="2">
        <location>
            <begin position="53"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="344" mass="40297" checksum="533BB821E09EF68A" modified="2025-10-08" version="1" fragment="single">IQGAKNSKSIVVSLFSYKGNFNKIIENNRQKNLDKYEIIGRVSDETSITLKKRIDMLVTLVQGKFTQENIKYVANQKIKQLTKKKPKNIQVLVRLLHSNGEFLKNCFHNSAESVKPCFSVFKTFIIAHENSPVYKEKFYIKIEEELLSQSFLYIEYRHVSVNTDKTCVFGFSFIPLGQKNKILDNDTKDLIVYCASNILDGKLNVKLSKDFIKRKDRFILSTYYNSTEYSQNEHLNLVLHWKQNSSNVIQSMKNFNQINGRILLNSFRKTLDCLFDMLEESQTTNKNLIFDCIIHVIHELTCKLKEKRNLSIQYYTKKYIGTTFRNKNSHVFLVSEIKKLFEDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG5</accession>
    <name>A0ABV2APG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002878</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001260">
        <property type="protein sequence ID" value="MES1921341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11789" checksum="7E16772B2D011593" modified="2025-10-08" version="1" fragment="single">MNSSSGLLSLTNGSLTKRENKPASEDFHSNTFIALKISIMVEELKEKIKLKNMKNVSKFVSVRFADLAKRDFNFELINLVNSHYKFRLHNFGFVFFKNSDHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APK2</accession>
    <name>A0ABV2APK2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003131</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001533">
        <property type="protein sequence ID" value="MES1921601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13395" checksum="1E169D8206B03C14" modified="2025-10-08" version="1">MKKGNCDKVRFFALKTVALYAYKSIWCRDSEDRIFEMLLEMIAKEPEKFGTACFELMMDLVYVEVEIYYKVLYKMLGAAWEHIINSKTEDTKLRTACQNFLLLVHEKVFCQNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN3</accession>
    <name>A0ABV2APN3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003164</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001574">
        <property type="protein sequence ID" value="MES1921636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13704" checksum="53F1EB5225483211" modified="2025-10-08" version="1" fragment="single">MESRNAEQIEKDISELESILLKCRSDHNKSKIQEIICEYKIELTRIPKNLKYTKSETKMVKTNWVKFESISFIIDDADNFIKIFVKNKNGDFGNVKKEDVFCDFTKRSFDLKLTNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP1</accession>
    <name>A0ABV2APP1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Dienelactone hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003169</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001578">
        <property type="protein sequence ID" value="MES1921640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002925">
        <property type="entry name" value="Dienelactn_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051049">
        <property type="entry name" value="Dienelactone_hydrolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46623:SF6">
        <property type="entry name" value="ALPHA_BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46623">
        <property type="entry name" value="CARBOXYMETHYLENEBUTENOLIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01738">
        <property type="entry name" value="DLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dienelactone hydrolase" evidence="1">
        <location>
            <begin position="24"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23520" checksum="0E926C98D2D6DF37" modified="2025-10-08" version="1">MHEYWGPENILNQATEWFCPKKFKLADLSYNLLVPDLYRGNLVEDFKRSQNYILTTKPDVMGAMEDVKSTVKFAKDKLKATKVGIVGLSMGGALAMCAGLHVEGIECAVSFYGIIPDRLALLKDVKIPMQYHFGDKDALRGFTTPKEVNLLKEKLEKWNNSNHEIFMYENARHSFANESTSESYNDKVTQIAKSNMFPFLERHLKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT2</accession>
    <name>A0ABV2APT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003193</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001606">
        <property type="protein sequence ID" value="MES1921665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13111" checksum="D26C0C8609D54571" modified="2025-10-08" version="1">MAAEESITTKLNIERNSISTEKLLEYSPNIKKDQIFIIAGELGPNEKASEAIKKTKFFNSENPFNTFELETNSFLNGKDKMTLRCFVTNSDLVDEAKNGFHKFCKERNWIKLNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW5</accession>
    <name>A0ABV2APW5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003238</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001658">
        <property type="protein sequence ID" value="MES1921708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="48"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="87"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="13330" checksum="0C6595A388B1144B" modified="2025-10-08" version="1">MGVSDTLSNALVPLAFMLQINGTTAYNVMVISFTAHIYKQRFPVSSKILLVLVSTFFSVTTPPIPAGSVLNLPFYGKMVGIDVPAEIISLMMMTDFFFDRLSTVFQIFILRYLTCFRTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ36</accession>
    <name>A0ABV2AQ36_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003184</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001591">
        <property type="protein sequence ID" value="MES1921654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12350" checksum="B675FC8134CC7360" modified="2025-10-08" version="1">MSKLTICLCAMSTVDFVSLEPLKNGFTLILLKVSNYCKNLTATEMEYLLDILIISNIIIRVSTIKLKLLWLKLLYGIFIIIAQSFVANMVDSEQQTVKRTILFKIISSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ56</accession>
    <name>A0ABV2AQ56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Basic leucine zipper and W2 domain-containing protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">BZW2</name>
        <name evidence="2" type="ORF">MHBO_003343</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001801">
        <property type="protein sequence ID" value="MES1921810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003307">
        <property type="entry name" value="W2_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02020">
        <property type="entry name" value="W2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51363">
        <property type="entry name" value="W2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="W2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7444" checksum="ED68A889852E52AE" modified="2025-10-08" version="1" fragment="single">HCVRILYDTEILFEEVILNWWKEINERKTKGVLESRNNDLLNAIRIFIEWLSSEEYEESSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ4</accession>
    <name>A0ABV2AQQ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Mitochondrial phosphate carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_003526</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002065">
        <property type="protein sequence ID" value="MES1922003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044677">
        <property type="entry name" value="SLC25A3/Pic2/Mir1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45671">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45671:SF10">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 25 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="28"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1922003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="205" mass="22967" checksum="0FD4DF26448024FC" modified="2025-10-08" version="1">MPDNFESEPLLPGANFQKPPSKPKHDLCYYLKCMFGGVLSCGITHTAICPLDVIKCNMQVNPVRYPNLFSGFGTLFREEGVRGLMRGWAPTAIGYSMQGLCKFGFYEVFKDYYSKLAGDENAVRYRRLIWLAGSASAEFLADIALCPMEMVKVKVQTAARGEWPSSLSSATRRMVAERASTRFPFGSLVPLWTRQIPYTMAKVYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS8</accession>
    <name>A0ABV2AQS8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003547</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002106">
        <property type="protein sequence ID" value="MES1922030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PROTON/GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865:SF7">
        <property type="entry name" value="PROTON_GLUTAMATE-ASPARTATE SYMPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="53"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="201"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="258"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="302" mass="33572" checksum="4F96EB0B4DB0DAF3" modified="2025-10-08" version="1">MIGKALPDNIFKAQADGNLLAIVCIFMILGYYFSKHDDKKDGSEGQMFQMVSIFYETISSIVNFFMYFTSFAVFAIIAKNVALIKDLDGLVSIYPLAYTFIGSIVACFFVYCVLCGVVIQKNPFQILKEYKDPIVTAISTSSSATALSQMIIVGKNRHPNYEKETNFIMTMLSTFQMSGSAVYFTVVTIFVAVMNGKPLDFGHYIILAIVVIMVTIANSPVPLSVIVFLNVVCNSIGVTVSTRLQSVLITFDCFLDRLITTLNVIGGIFTFEIVFALYTKQNPQVKKYVSTTIDNDPGYVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR77</accession>
    <name>A0ABV2AR77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003560</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the WD repeat MORG1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002135">
        <property type="protein sequence ID" value="MES1922044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051980">
        <property type="entry name" value="WD_repeat_MORG1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22842:SF3">
        <property type="entry name" value="WD REPEAT DOMAIN-CONTAINING PROTEIN 83"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22842">
        <property type="entry name" value="WD40 REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="10"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="53"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="95"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14019" checksum="CB80F757E309DE32" modified="2025-10-08" version="1" fragment="single">MFPKKLLRKLNNHKNAVYSAEFTNDGIYCMTGGQDSKIHLINPEKSLLIKTYHNEHGNELRDLKIRSDNCQFATGGSDKNAYVWDVSNGRILRKIRGHSGTVNAVNYNNDETVLVTGSYDGKVCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR99</accession>
    <name>A0ABV2AR99_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003716</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002383">
        <property type="protein sequence ID" value="MES1922205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="75" mass="8659" checksum="B155C02BBF17299B" modified="2025-10-08" version="1" fragment="single">MISKCIDIYPVFDLVGENEISDKNSSANDRGNINGKKVEKRAFSNSRKIDEKRAFSNSRKIDEKRRKIVEKVNVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARB7</accession>
    <name>A0ABV2ARB7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Eukaryotic translation initiation factor 5B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">FUN12_2</name>
        <name evidence="4" type="ORF">MHBO_003729</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002412">
        <property type="protein sequence ID" value="MES1922220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03703">
        <property type="entry name" value="aeIF5B_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10050">
        <property type="entry name" value="Translation initiation factor IF- 2, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023115">
        <property type="entry name" value="TIF_IF2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036925">
        <property type="entry name" value="TIF_IF2_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381:SF4">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 5B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR IF-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11987">
        <property type="entry name" value="IF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52156">
        <property type="entry name" value="Initiation factor IF2/eIF5b, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Translation initiation factor IF- 2" evidence="3">
        <location>
            <begin position="150"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="327" mass="35576" checksum="D7EDF744E25F3167" modified="2025-10-08" version="1">MTGEGIPDLLSLLVKLTQTRMASRLQLSGKVECSVLEVRQDEGLGHTIDVILSDGSLKLNDRIVLSGLCGPIDTTIRALYEPAPLKEIRFKGEFKSIGEAFAAAGVKICAQGLENAVAGSRLRVCGENDDIESLKQKAIADVSGILGKVDAAGKGVSLQSSTLGALEAFLEYLKSEKIPVCNIAVGPVRKKDVLAASVMLEKKPEYACILAFNVRVDREIEQFAEEVGVKIFKGEIIYNLKDFFLDYIADLKQKTKKEGKPVFPVIMSIIPEFVLMKHNPIILGCKVEAGKLLVGTPLAAIMDEKVFGNVNKNVFSKTILQNFKCTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG7</accession>
    <name>A0ABV2ARG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003647</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002262">
        <property type="protein sequence ID" value="MES1922134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="122"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17349" checksum="2DCEA19B953D76BA" modified="2025-10-08" version="1" fragment="single">EKRKDERSPRRSSRYSRSRSLSRSRYSKSSSSKSRNRRRNRSPRRRRDDRYEDENYDIYKPRTRPPPTRASRAFTQAQEGLVWDGFQWTQPSGLSVKQKSENLATKIMDVMGTDDQKRNPNAQQAMVQQAHQQAALLREHLNKLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG9</accession>
    <name>A0ABV2ARG9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003477</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001982">
        <property type="protein sequence ID" value="MES1921952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6361" checksum="9277744C7A3CA877" modified="2025-10-08" version="1">MLTKPAEAGIRVVCCLLRIYCLKVFPFLHRIPPKWGYVIRVKHGSHSSGPAIKTLAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI0</accession>
    <name>A0ABV2ARI0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003492</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002002">
        <property type="protein sequence ID" value="MES1921967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15233" checksum="DD26D00FD252B3BB" modified="2025-10-08" version="1">MKSRSKKIREPMVALSQSRILLIAVVMKLTKSFPVSNLDQHLNFQETVFRSYVTMRKKMMRTQVKLRVKMTQQVTKRDPLNPNVIMLSTQQLKTMIRKHPTYQQMKTLISKHPKHQKMEDVLIQCPAKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR5</accession>
    <name>A0ABV2ARR5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DNA helicase Pif1-like 2B domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_003873</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002671">
        <property type="protein sequence ID" value="MES1922367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049163">
        <property type="entry name" value="Pif1-like_2B_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051055">
        <property type="entry name" value="PIF1_helicase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47642">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47642:SF5">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21530">
        <property type="entry name" value="Pif1_2B_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA helicase Pif1-like 2B" evidence="9">
        <location>
            <begin position="72"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF21530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="20627" checksum="49B95DECDBCA2FBF" modified="2025-10-08" version="1" fragment="single">MLSELRKGVMTPKTKAVLSQTSTNVLPKDSVMIHCHRNTVAKKNALMLKALKTKAHFYEAKDSSTIRLPSDYLKNLFANCPAPLRLVLKIGAPVILVKNISDELVNGLSGKVTDFFYEKKEDEYLPVVQFKTINEPIIIERNTWSIEKGDGSVLACRKQLPLNLSWALTIHKCQGMTLENAVMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR9</accession>
    <name>A0ABV2ARR9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_003618</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the syntaxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002216">
        <property type="protein sequence ID" value="MES1922103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010989">
        <property type="entry name" value="SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045242">
        <property type="entry name" value="Syntaxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957:SF83">
        <property type="entry name" value="SYNTAXIN-16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05739">
        <property type="entry name" value="SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00397">
        <property type="entry name" value="t_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47661">
        <property type="entry name" value="t-snare proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="300"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="12">
        <location>
            <begin position="227"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="101"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1922103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="319" mass="37290" checksum="901BC78ED6F5E13A" modified="2025-10-08" version="1" fragment="single">SMLIFTISEVHMAQNLTKDFLELRNRMRRPRRHDKDLEEVEPFLKTNGDDTQKRNVSDPSPSWIVISASLKIIFSKIRTEIKKLSNYHSERLNPIFDAKLEKKLEAKIENLSQTISKYLEQAENNVKKISIFENGAPKNNSVFTNLQDEKTIRLNSMRFNANILRKMTNAFQKQERYFFREMSAQKSDETKESKQVRSKNSFEFDDFILNSNDGEDLFANRKLTKTRENETRDEKDIKRIAKRTESLSRLFGELGSLVIDQRSKLDRIDFAIENSVDNIQSAVDELEITKRNQLKSKSSMIIFWLIVAIAVCLIILILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS84</accession>
    <name>A0ABV2AS84_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RNase NYN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004042</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003024">
        <property type="protein sequence ID" value="MES1922528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11980">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="261" mass="31355" checksum="F503ACE863ABD70F" modified="2025-10-08" version="1">MSLAPFKNFLSFGVSTQIYRILKKKNIQQHLQIKKEKSIFYKEKPFLLNQSNRRSILKSIRQIFGIDQFLEEIRLFSRQKGPFDCVVDGYNAIFSDQLLPKNNLSPENTEKHITTKLKNCLNYFHDKNFKPLILFYKSTFILSYLEAIKYSEDFHDNLLVVEMKNEDLYICSAAILLNVPLITNDKFKKEKNFVFSDHFREWCRFNCYRFSVEDFNLFKLKQFEKTVLKRRLLKGEDSDDLNEFWLSSWNGYSYLFRLKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS86</accession>
    <name>A0ABV2AS86_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004027</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002991">
        <property type="protein sequence ID" value="MES1922512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01159">
        <property type="entry name" value="WW_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WW" evidence="2">
        <location>
            <begin position="15"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="161"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21792" checksum="DA7D16C8ED3840F0" modified="2025-10-08" version="1" fragment="single">FESENLKISRQLENSNWFQIYDAECPTSYFFDNKKKITQWEKPTKEEIKDNPMPREETECRGSNSQGTDSANTDIGIMVKQPSISNRSFKEISKKNSNMLNYKHRKKSNPSMSHIDAMYESSFRKHEVDKSLSSPAYYRELNSAHGPASPRMREIQNHSLGHKLPFSPFQHSILQEAGPGRVSSPNYSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA9</accession>
    <name>A0ABV2ASA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003082">
        <property type="protein sequence ID" value="MES1922555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8637" checksum="949B5B9BC4E8573E" modified="2025-10-08" version="1">MKTLRFPSKKTNRFLTIRKFSSIKNCNKFRNKETKMARVSRNLEALKKLIPIDILEELCETKNVKKCCDVFAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR7</accession>
    <name>A0ABV2ASR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-binding mismatch repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">PMS1_2</name>
        <name evidence="4" type="ORF">MHBO_004132</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA mismatch repair MutL/HexB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003235">
        <property type="protein sequence ID" value="MES1922614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00782">
        <property type="entry name" value="MutL_Trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013507">
        <property type="entry name" value="DNA_mismatch_S5_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038973">
        <property type="entry name" value="MutL/Mlh/Pms-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073:SF52">
        <property type="entry name" value="MISMATCH REPAIR ENDONUCLEASE PMS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01119">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13589">
        <property type="entry name" value="HATPase_c_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01340">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair protein S5" evidence="3">
        <location>
            <begin position="173"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="285" mass="32669" checksum="226444B89A805A02" modified="2025-10-08" version="1" fragment="single">SNEIIIQICKSKNDNIDISVKDNGSGISEKDLDKICQMNTTSKISSFGDLATLKLYGFRGQALNAICNASDIEILSNNDNRNNKATYDRYGNIKEKFCNCEKLNGTKILAKNIFSDYPVRQKFLAKSINSEINKILYICKAFLIAKKELKLKLTYKNEDNMKILLNATSYSDKNSIFSNNTQILNINLFDPDIDLQLKGTFYKNKSLDGSLGRSLRDKQFLFVNERIVFNQKIKKMVNSEYKKATEGYYPLYHLKIRIPNEKIDFNISANKTKILFVNENLVVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT10</accession>
    <name>A0ABV2AT10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004311</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003721">
        <property type="protein sequence ID" value="MES1922787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10169" checksum="047F3A12D992CBEE" modified="2025-10-08" version="1" fragment="single">TTVGFNQLDSSPICFLHHYIITKHGYSYKGIWAELENPWADPFISGCHKLNSFNDFVEVGEIVDPPSDFEILDFHLSEKGRVALRKRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT62</accession>
    <name>A0ABV2AT62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004373</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003867">
        <property type="protein sequence ID" value="MES1922845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046592994" evidence="2">
        <location>
            <begin position="19"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9278" checksum="94A96373F0D30E0E" modified="2025-10-08" version="1">MNQSIFFIISPLYLGVYAVEYNKPPTQHYLNIQLDHPHFSSTGYESIKPGPHNGGTDSTSRPKTASANSLAFDKIPDKRIENN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC5</accession>
    <name>A0ABV2ATC5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CID domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004449</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004039">
        <property type="protein sequence ID" value="MES1922921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006569">
        <property type="entry name" value="CID_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008942">
        <property type="entry name" value="ENTH_VHS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04818">
        <property type="entry name" value="CID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51391">
        <property type="entry name" value="CID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CID" evidence="1">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="247" mass="29393" checksum="0565F0DEF8F59D2E" modified="2025-10-08" version="1">MEILKNIKKSEITERVPLVFLVDYLYRNIKTSKLAHDLEPFMVHIMENTFLMETSARLKLAEILNDWETNNIYSAEMRFRIRKTFQKYKSVAQSTHFDKNFAIKKRKLAAKTTDKNKKKSFRNSYENALESLYSTIGQRQCAICGLRIKEEKSEIEKHNLLHNKNLNVNKEYYQEYEDAIRSRGYYLTDEEWLKYVLETIGLIKKEEENAEKKTGKNKKIELKVYSSSKYPQFCDVFANLNKFKFSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATM3</accession>
    <name>A0ABV2ATM3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cullin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004271</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cullin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003573">
        <property type="protein sequence ID" value="MES1922748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1310.10">
        <property type="entry name" value="Cullin Repeats"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001373">
        <property type="entry name" value="Cullin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016159">
        <property type="entry name" value="Cullin_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00888">
        <property type="entry name" value="Cullin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74788">
        <property type="entry name" value="Cullin repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cullin N-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17932" checksum="50A0B76B21C237E4" modified="2025-10-08" version="1">MYNNFIVSVREYCRRIKKSLLEQNDDFLLSYSQNYRKFKLFSYWITKIFAYLNRFYVVHSKKHRLEKICQKIFKINVLEKETSKLVEKITQEIGKMRTEHLSVDSEKIRACFDSFVEIDSSQQLFREKVAKPVLKQTEDFYKQFEKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP1</accession>
    <name>A0ABV2ATP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">T-complex protein 1 subunit eta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CCT7</name>
        <name evidence="6" type="ORF">MHBO_004284</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003613">
        <property type="protein sequence ID" value="MES1922763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="entry name" value="TCP-1-like chaperonin intermediate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="GroEL-intermediate domain like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00750">
        <property type="entry name" value="TCP1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00751">
        <property type="entry name" value="TCP1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00995">
        <property type="entry name" value="TCP1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="23674" checksum="7775F1727AAF5180" modified="2025-10-08" version="1" fragment="single">MIRPQVLLLKEGTGTSQGKSHLIANINACAAVADILRTTLGPMGMDKLIKTADTVNISNDGATILRLLDLVHPAAKTLVEISQSQDKEIGDGTTSVVLLASELLQNAKEFIEDGVTPQAIIAGYRAASAEALNHLEAISFKVTDIDLPDGGGDSKERFMLRQCAKTALNSKLIENEKDFFASMLVDAYLSSAEHGAPREFVHVKPIAGGSVRESFLVQGVAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR3</accession>
    <name>A0ABV2ATR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004428">
        <property type="protein sequence ID" value="MES1923037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="8507" checksum="59F9A0465BECEC29" modified="2025-10-08" version="1">MLETVSKGHSLIITDASAMVAAVAYKVPEDSANKAPDRCTAVHGSDGSCAVWGSSGDLSVPFRTERLPLTNLYVMRGLGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU39</accession>
    <name>A0ABV2AU39_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004443</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004026">
        <property type="protein sequence ID" value="MES1922913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15430" checksum="05E8EB2233530B70" modified="2025-10-08" version="1">MIELLTGLSAGVLTRPETSYATATEMKANLQMTFAFITNFRGGIEQAVNDLLYAVDKICNRNDITPMGNYDAVFEWSNSYIENMEARFSELMQAQAVGAIDKAELRAWTMDEDYEKSKERIEKIDSEKPDVIEEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU87</accession>
    <name>A0ABV2AU87_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004768</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005165">
        <property type="protein sequence ID" value="MES1923224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14829" checksum="734CAE3916D67249" modified="2025-10-08" version="1" fragment="single">MLEIITHINAPLDTAEGIKEALAMDQERFGDVRVVSVREIRKIADKSIVPKKKQRLIDVHVAIQEVNDMSTSVLNEWDSMGVRCLLERQPTVEEVKDKRKGKWIKTEDYIMIGEDGRLDIYRCSNCDAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE2</accession>
    <name>A0ABV2AUE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004552</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004385">
        <property type="protein sequence ID" value="MES1923018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13594" checksum="A46DAFCF174B8C90" modified="2025-10-08" version="1">MFFAKNRRFRPNGLNLENRNLANIENRRRSLVKNENRFGNFGQTLGPSFRRERRFFNQNYDSANRRNGDYGFSRGPAKRFTGGYSPRFRTQRIVESKYGGTATEVESKNEDFGYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU9</accession>
    <name>A0ABV2AUU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004794</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005296">
        <property type="protein sequence ID" value="MES1923249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055358">
        <property type="entry name" value="CHCR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000547">
        <property type="entry name" value="Clathrin_H-chain/VPS_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10292:SF1">
        <property type="entry name" value="CLATHRIN HEAVY CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10292">
        <property type="entry name" value="CLATHRIN HEAVY CHAIN RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00637">
        <property type="entry name" value="Clathrin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00299">
        <property type="entry name" value="CLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50236">
        <property type="entry name" value="CHCR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="CHCR" evidence="1">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="repeat" description="CHCR" evidence="1">
        <location>
            <begin position="69"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="22717" checksum="777F0A404D152E8B" modified="2025-10-08" version="1" fragment="single">MKEDLYEPAKVLYEHAKSFGHLALCLVNLGEYAEAVKAAEKANNIKTWKVVCFACVDAGVFELAQVCAVRVVAHTDQLKELLHHYEQSGFFEAAISVLEKAVGKERPHPGLITALGVLYCKYRPSNLMAHLEAFSDKINVQQLIKVSIEFGRWAEAVFQYRRNRQFNRAAELMMEHSPSCFDHEVFKDVTENISSGDLLLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW2</accession>
    <name>A0ABV2AUW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific</fullName>
            <ecNumber evidence="9">2.1.1.354</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">NSD1</name>
        <name evidence="9" type="ORF">MHBO_005029</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.354" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010006274">
        <property type="protein sequence ID" value="MES1923455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140999">
        <property type="term" value="F:histone H3K4 trimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006560">
        <property type="entry name" value="AWS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050777">
        <property type="entry name" value="SET2_Histone-Lys_MeTrsfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22884">
        <property type="entry name" value="SET DOMAIN PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17907">
        <property type="entry name" value="AWS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00570">
        <property type="entry name" value="AWS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51215">
        <property type="entry name" value="AWS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0158">Chromosome</keyword>
    <keyword evidence="4 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AWS" evidence="8">
        <location>
            <begin position="14"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11589" checksum="CD363E96BF5CF176" modified="2025-10-08" version="1">MVDKNINHSLLKDDVPSICNCVYKAVDPNSACGNQSNCVNRLTFVECDPETCPTGTNCLNREISTARKPKLIIRKFKEKGFGIVAGENIVVNQFISQYFGEVFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUW6</accession>
    <name>A0ABV2AUW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antiviral helicase ski2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SKI2_2</name>
        <name evidence="2" type="ORF">MHBO_005040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006317">
        <property type="protein sequence ID" value="MES1923465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="52"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13754" checksum="6CB5EDD60F411647" modified="2025-10-08" version="1">MMVGIPNRLTSKFRVTFNMILNLLKSEGANVKDVIKKSFDQSDAQLLIPKQLLSLKENKDKLEILKMEKENEMTFEMEEYFKFLVRQRSLLTKLVQYSLMSNNAAKEFAPGLLNCQKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV60</accession>
    <name>A0ABV2AV60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006834">
        <property type="protein sequence ID" value="MES1923550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045059920" evidence="1">
        <location>
            <begin position="19"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="10754" checksum="A3B137330AB775F5" modified="2025-10-08" version="1">MNMLLSLLLSLSFIFAQANGSCKVTYTLQGLSTISEGLSSNDCHFDEAAKEVEVNGSCILTTKSGFLVKVDGAYSPTAQLVCLHDGTPVIKHFDLIKIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE5</accession>
    <name>A0ABV2AVE5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Choline dehydrogenase 3</fullName>
            <ecNumber evidence="4">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">CHD3</name>
        <name evidence="4" type="ORF">MHBO_005178</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010006995">
        <property type="protein sequence ID" value="MES1923582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623">
        <property type="entry name" value="CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="25"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="13383" checksum="15DA1CB5A43A31FF" modified="2025-10-08" version="1" fragment="single">MCAKNSKDLLRLLISSSGKFVLLSKLLPKLYSIGSRVLIFSQMKIVLNLIGTLLKSQGLRFERIDGSVTGSERQAAIDRFQNGKDSFAFLLTTRAGGFGINLSRADTVIIFDSDWNPQNDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW00</accession>
    <name>A0ABV2AW00_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005094</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006581">
        <property type="protein sequence ID" value="MES1923512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9094" checksum="1E357B127C0104BA" modified="2025-10-08" version="1">MEKITDAELKRLNDLNSEFNTIKTQLGDLTLQKHGLVLRVQELKGEFQTAEEGLMQTYGKDTVINLETGEVKQKENGEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE81</accession>
    <name>A0ABV2AE81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Squalene synthetase-like protein</fullName>
            <ecNumber evidence="2">2.5.1.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sqs1</name>
        <name evidence="2" type="ORF">MHBO_000064</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phytoene/squalene synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.21" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000008">
        <property type="protein sequence ID" value="MES1918036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051996">
        <property type="term" value="F:squalene synthase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00683">
        <property type="entry name" value="Trans_IPPS_HH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002060">
        <property type="entry name" value="Squ/phyt_synthse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006449">
        <property type="entry name" value="Squal_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044844">
        <property type="entry name" value="Trans_IPPS_euk-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033904">
        <property type="entry name" value="Trans_IPPS_HH"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01559">
        <property type="entry name" value="squal_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11626">
        <property type="entry name" value="FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11626:SF2">
        <property type="entry name" value="SQUALENE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00494">
        <property type="entry name" value="SQS_PSY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00005">
        <property type="entry name" value="Isoprenoid_Synthase_Type_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01018">
        <property type="entry name" value="Squalene/Phytoene_Synthase_Lik"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="412" mass="47360" checksum="49EB363DBD804091" modified="2025-10-08" version="1">MIIESIAKQLRLDEFIALLCLRWNHSRHRRAPLADSADMSDEEFCFAALARTSRSFAIVIGALGPELRIAVGVYYLLLRALDTVEDDSDCGDEKRRLRLLGDFHRLIEDSEFVINGFGSEDERFLCENLDKVLRVFHKLPRAYRMVIKQTAEEMGSGMIKFSNVVHVESIAQYNEYTHYVAGILGEGLTKLFILSGSENRFQIGDYKSTSNSMGLFLQKTNIIRDFKEDLEEGRNWWPKEIWGGHFDRLEEFAKKPGSTESLKCLNEMVCDAIAHFPDCSEYLSKLSDRKVFRFCAIPQIMALSTLELMYSNSEVFEKSVKLRRGYTAKVFTKLLSYDDFQEIAVVCCNKLLAKMKWSRLGEDRAHVKKVESAIRRLEKLVSGWKNINTKSSWSFLDVAEMGALALFLIWKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE82</accession>
    <name>A0ABV2AE82_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">carnosine N-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000035</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the carnosine N-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.22" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012901">
        <property type="entry name" value="CARME"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12303">
        <property type="entry name" value="CARNOSINE N-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12303:SF6">
        <property type="entry name" value="CARNOSINE N-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07942">
        <property type="entry name" value="CARME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01296">
        <property type="entry name" value="N2227"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="429" mass="50404" checksum="F7D7DD3EF4737F12" modified="2025-10-08" version="1">MSKLDEDESEYHHLRDVADSMNRYSEILAKRIRKKERDFGYLLPKYRKMVPDFKMKMKICENLIKENQKFLSAVSENALEHFRLDLKEQFCGKKVFEEKRKKEQSLLKTEKILSTLKQCCRDWSEEGAFERRQSYGVVLDELEHLYPDISKRTKIKVLNPGCGLARLTWEIAKRGFASQGNEFSYFMLFTSHYILNRANKNSETVYPFVHVTKNNYSFRDQSRSVNFPDVDTSELPTEGNFSMVAGDFLEVYGNIEEMGKWDVVVSAFFLDTARNPLQYLETISRLLRVGGYFINFGPLLYHYADNPNEFSIELSLEQLRANLRDFGLELIKEESNLESEYCANVKSMQKTVYNSFLWVCKKFEADEKQAIFDGEKSRLGGLRKVPDYYNSKIYIFRIYILKVSSHIFQLFQCISHAGDSYCERQNKQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE97</accession>
    <name>A0ABV2AE97_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SLC12A transporter C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000074</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000009">
        <property type="protein sequence ID" value="MES1918048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018491">
        <property type="entry name" value="SLC12_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004842">
        <property type="entry name" value="SLC12A_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827:SF72">
        <property type="entry name" value="GH08340P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03522">
        <property type="entry name" value="SLC12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="SLC12A transporter C-terminal" evidence="5">
        <location>
            <begin position="49"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15576" checksum="2520D6D8612397F1" modified="2025-10-08" version="1">MFIKHPHNWREPETLRHSYFSLLCAASARENGIMIALNFDQLDLINTDPFGTIDVWWLYDDGGLSILLPHILTKSSFWRRNTEGGKTLVPLRLFIISKEGELERKSIYDLLAFYIKNCSLHFLKENFGWTILM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AET0</accession>
    <name>A0ABV2AET0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000201</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000026">
        <property type="protein sequence ID" value="MES1918192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100">
        <property type="entry name" value="IMP2'P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100:SF4">
        <property type="entry name" value="USPA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="24"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18191" checksum="FBD232DF0435A00C" modified="2025-10-08" version="1">MNFYTEDEISIDKFPDFDKFHPKRRVAIAVDGSESAIKSLKYAIENVFRKDDAIFVLNAVKTSNFEAFKSEEEAKGLKIQNTEKAAFAVKKSLELLKDFDKKHGLVLTGKDEREILLNALETLEPNFFVVGSRGLGAVKRVVLGSVSSYLVHHTKCPIIVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF97</accession>
    <name>A0ABV2AF97_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Squalene cyclase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000334</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the terpene cyclase/mutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000047">
        <property type="protein sequence ID" value="MES1918356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032697">
        <property type="entry name" value="SQ_cyclase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018333">
        <property type="entry name" value="Squalene_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764:SF20">
        <property type="entry name" value="LANOSTEROL SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764">
        <property type="entry name" value="TERPENE CYCLASE/MUTASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13249">
        <property type="entry name" value="SQHop_cyclase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Squalene cyclase N-terminal" evidence="2">
        <location>
            <begin position="8"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="213" mass="25143" checksum="89356D9AB90F1CF7" modified="2025-10-08" version="1">MFLLPNFIIVFNITRTPIETRKKELMTQYIKNHQNEDGGWGTHIQSENSTMFGSVMNYIAARLLGNSQKSNWLQRAKRFIHKNGGAIQAPPWAKFWMSVLGVYEWVGINSILPELWVLPECLPFHPSRWWCHCRMVYLPMAYIYANKIKRKETATTKAIKDEIFTTPYNKVNWIQNRSSVSELDDFYKLLTQNFYIKVKQSSTQDMLYDNQFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFN0</accession>
    <name>A0ABV2AFN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000464</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000073">
        <property type="protein sequence ID" value="MES1918500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="22"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="104"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="150"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="14905" checksum="3DED1A5BE70C2D82" modified="2025-10-08" version="1">MKTEISMKNLCPQGPTGPPGPIGKIGAPGPDVVGPPGHPGTPGQPGCSGKPGMIGLQGPPGKGGPGPQGIPGPVGPPGPPGPAAPMGPPGAKGPSGEIGPVGPPTVGLPGLKGQPGPQGVTGPPGPPGINGNIGPPGPPGPPGPPGSAIPPSTSKISSRSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFN8</accession>
    <name>A0ABV2AFN8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transposase IS204/IS1001/IS1096/IS1165 DDE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000443</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="99" mass="10952" checksum="202B72DE08978645" modified="2025-10-08" version="1">MSCGKSPLIKTFAFVAFEDGDRNVISRCADAGVSPSGSREIDALQTEVAGDQCQPCHRSEQLLFDRVHFLRAVRNASVSRTVVSQFQQNLAPLVDRVNW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG51</accession>
    <name>A0ABV2AG51_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">VIP1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000598</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>1D-myo-inositol hexakisphosphate + ATP = 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:37459"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58130"/>
            <dbReference type="ChEBI" id="CHEBI:74946"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.24"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="2">
            <dbReference type="Rhea" id="RHEA:37460"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ATP + H(+) = 1,5-bis(diphospho)-1D-myo-inositol 2,3,4,6-tetrakisphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:10276"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58628"/>
            <dbReference type="ChEBI" id="CHEBI:77983"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.24"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="1">
            <dbReference type="Rhea" id="RHEA:10277"/>
        </physiologicalReaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000103">
        <property type="protein sequence ID" value="MES1918664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.20">
        <property type="entry name" value="ATP-grasp fold, B domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037446">
        <property type="entry name" value="His_Pase_VIP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040557">
        <property type="entry name" value="VIP1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12750">
        <property type="entry name" value="DIPHOSPHOINOSITOL PENTAKISPHOSPHATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12750:SF9">
        <property type="entry name" value="INOSITOL HEXAKISPHOSPHATE AND DIPHOSPHOINOSITOL-PENTAKISPHOSPHATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18086">
        <property type="entry name" value="PPIP5K2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56059">
        <property type="entry name" value="Glutathione synthetase ATP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VIP1 N-terminal" evidence="3">
        <location>
            <begin position="7"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00033696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00034629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="293" mass="34809" checksum="3978305549CA27E3" modified="2025-10-08" version="1">MKHEFLKIGFLTTDKKAKNKQIRNLVERLEAFGEFKAEIVRSSYLDKLPAEEWPIFDVFIPYHLDFFTIDKALEYVRIRKPFLFNDLESQAKIQDRRHIYECLRKNGIPCLENFVYDHTDQSNPHKFEENDDYIQTNGMRIYRPFVEKPLSARRHDINIYYSKAMGRGVRKLFRKIKNVSSQYYPGPSQVRRDGTYIYERLIDSVKDIKVYAVLDDYCYTEMRKSPNVDGVVERNAEGFEKREFCPLTYEEALIARKIIKVFKQNVCGFDIIREDEKKLNSIKKVRSSSTSTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG76</accession>
    <name>A0ABV2AG76_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glycosyl transferase family 25 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000586</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000100">
        <property type="protein sequence ID" value="MES1918647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002654">
        <property type="entry name" value="Glyco_trans_25"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01755">
        <property type="entry name" value="Glyco_transf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycosyl transferase family 25" evidence="1">
        <location>
            <begin position="37"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="415" mass="48530" checksum="ADDEF350D90FD2D9" modified="2025-10-08" version="1">MVAFCRYFAIFVFSKIFTNSETSDKSEILRVNDVFDRVFVINLSLRQDRMFMIQKSLERLNITFERIEAINGNTKHYSNLYDNLKWAFSQYSSPASLGLARTMLRTLRIAKGRGYRRILWLEDDAIFHKDFLSQFDRSMKKIPEDWSVVQFGSTFLKMSHIKKHDGYFTARKPIEGAFAVGIDERAFDDMIRLLELDMGVIDSKVISGACLKRRHHCYYILPFIVVADVRTSDINPRRIKYSPFSRIGKTRQRNSYENERYLVKMGDFYFPDDVCSISLILFIDPALDLQSVSSIMRWSVGQTYKMAEYIFLDFGLSASQKKAVTKFFDNSERFFVVDITEATEMGELYYRTGGKIVFATDGKDLANSEFVEDNIEILCTTIKRSERIKKRITFCDDKIKDFSIFDNTFKFARKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG84</accession>
    <name>A0ABV2AG84_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000104">
        <property type="protein sequence ID" value="MES1918670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19695" checksum="FEA3783490E08E81" modified="2025-10-08" version="1">MFDKNGKLKLVDFDNSVLIGYKYPQHFKPFGTLIYTAPEQANGKIYKKTDWYNLANFMLYCMFGETSNTSLVPIDREGNFYRGNSLDLIAKRDKDFVFSTEEEGLKDFASLVNACMKIKPKYRIDIDSIEDLKQINFFEEDIETDAAIFEDEIKEFLERRKNFFMLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG95</accession>
    <name>A0ABV2AG95_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Diphosphomevalonate decarboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000633</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000110">
        <property type="protein sequence ID" value="MES1918711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="entry name" value="GHMP kinase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029765">
        <property type="entry name" value="Mev_diP_decarb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053859">
        <property type="entry name" value="MVD-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041431">
        <property type="entry name" value="Mvd1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01240">
        <property type="entry name" value="mevDPdecarb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10977">
        <property type="entry name" value="DIPHOSPHOMEVALONATE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10977:SF3">
        <property type="entry name" value="DIPHOSPHOMEVALONATE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18376">
        <property type="entry name" value="MDD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22700">
        <property type="entry name" value="MVD-like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="GHMP Kinase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Diphosphomevalonate decarboxylase-like N-terminal" evidence="3">
        <location>
            <begin position="13"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="domain" description="Mvd1 C-terminal" evidence="2">
        <location>
            <begin position="189"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="360"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="546"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF22700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="546" mass="60385" checksum="21E2433826FB6BB6" modified="2025-10-08" version="1" fragment="single">MRDDGPIKMASCAPINIAVVKYWGKRDERLVLPCNSSISLTLDMDSLSTSTIVEASPKFEENEILLNGKKESFDNTRLKRCINDCIKFSSNPEKWARFKFHISSKNSFPTAAGLASSASGYACLVNCLCKMFGIREKNLISRIARMGSGSASRSILGGWAEWQKGEESDGSDSFATEIKPFGWWPDFRILILISDNSSKSVSSTIGMRRTANTSRHFAALLKTGHCEEQIEKMRKAISGRDFASFAEITMRESNRLHSACLDTFPPIFYLNDISRKVIETVHSFNSQRTKAAYSFDAGPNAFLFVLKDDLEDLINSLFGEFGQFDIEDNSKLRRSNLASAAVGRGESSRGIKRAVLARIGPGPKSSGDIGQSEQDDQSQKNEDHLRFHVQLERVRLEGGEEDEGEDGGRVVGVVFAPCFGFGAVLRHGVEDQPPDCSSVRVGFAFLAERGDGPSLSCVVSQEQEGHFVSFEGDCFREDNVDQVAYSFARVDFDLDAVHSAVEDLHFHEVPSVGIFWQEVDFGGALDPQKVAQSFPGRSSFCRFPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGH2</accession>
    <name>A0ABV2AGH2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Raptor N-terminal CASPase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000452</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000070">
        <property type="protein sequence ID" value="MES1918488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004083">
        <property type="entry name" value="Raptor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029347">
        <property type="entry name" value="Raptor_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12848">
        <property type="entry name" value="REGULATORY-ASSOCIATED PROTEIN OF MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12848:SF16">
        <property type="entry name" value="REGULATORY-ASSOCIATED PROTEIN OF MTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14538">
        <property type="entry name" value="Raptor_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="Raptor N-terminal CASPase-like" evidence="3">
        <location>
            <begin position="61"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="370" mass="42945" checksum="A54589FF7E1B58F9" modified="2025-10-08" version="1">MSGIRNIFVSPFNSNRHHFMSKKQADQDTYVPLIQSDKAKLIIVLFEDSKSTPKTFEENVSEANSDKAKELEKRYSAIFDKNEIFFVYEPTVSKFQDAVSKHSENSNRTDCLTIHYLAPRVSPNFRKERHKLYFRNRSSFSSLSVRELRKFVKSQLILIIEPGTFAEWIENSKEENTVFVCPPNKNPTNNCLSILPKQFFSECFQNPALTAIKWSLRASKLLKKESLKLSKLVCNSNFLKEIDLVLETVLDCVVFDLWPKESYIVLMKTNTKTSKIVKSAMLVQLLCKSVSCKPLFFPILPQITNHSFWDIFHLFIENSFYVLNNDDLNYSILETFNHQNLISFENYLCLNFSSKKPKLLPALQKVAIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGH8</accession>
    <name>A0ABV2AGH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000638</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000112">
        <property type="protein sequence ID" value="MES1918717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="3">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10825" checksum="2E0A28061CED0283" modified="2025-10-08" version="1">MMLKRGVDIVVGTCGRIKDLLEKQMLRLKALQYVVLDEVDEMLNIGFADDVETILSQIGNGENSEKKNKKHQVLLFSATLPKWVEKIAMKYLAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGJ7</accession>
    <name>A0ABV2AGJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000131">
        <property type="protein sequence ID" value="MES1918813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="551" mass="63535" checksum="5D9DABF87B58BA47" modified="2025-10-08" version="1">MTLAKLWDNELKSLKKTLKRINLDEFDHQNLNLNYETFFRNDKGFQSRNPCELTVDKDKNEVKLEFRENDIQDNKHLHECVSTFMKYCPLTETPTGDYPLLKVVRLRDGEKPFNPIDYRHAAKVEFVRYIITLALLADSCNLRIVECINPDTLVVDKHDQLRIVAINCDKRESATFNVQIVLNFLQYLFGNPIRNSIHDDLVSSLKGKAISGFELNEKLYQHPFFHQSSFNALPTVVSAIKNNTLWVCIAGKKVIEKSKMAGEVVAEKFFGKNIMVKPWDRNKKPSVEIISTELIGKRCVQIFKSDQAVAETEQLEHEVSEFIILDNRILFCDAIFTPGYERLHNHLPMMADLKYVQTIKGKAGMLSYPLREGNFIRQANKEGEQRIAKHFKTLISAVILMKDPQIGLCLERDIPLSNMYIDGDNLVIAFMDASYRSADNANSAISDSKEVKALVTTLKNMQHATGDEDSKDFDDFIARLESENRISYECMRHELFTRFSENKCPEFKTVINGMHASVLDLREPIEQHYKHVIRLNGERQSISFVFKQVSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX3</accession>
    <name>A0ABV2AGX3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000806</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000154">
        <property type="protein sequence ID" value="MES1918916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9844" checksum="61557B7FC6416AE2" modified="2025-10-08" version="1">MNGVLNKYYLNMACGKEKLPDQMNIGNQEKRTNTTDVDMDGKTLSDIIDPLEQEIFYPFEKSNMENYMLKDLFKFDDFSKTLLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY8</accession>
    <name>A0ABV2AGY8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Actin, variant 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ACT1</name>
        <name evidence="5" type="ORF">MHBO_000826</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the actin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000160">
        <property type="protein sequence ID" value="MES1918941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020902">
        <property type="entry name" value="Actin/actin-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004001">
        <property type="entry name" value="Actin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00022">
        <property type="entry name" value="Actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00190">
        <property type="entry name" value="ACTIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00268">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00406">
        <property type="entry name" value="ACTINS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01132">
        <property type="entry name" value="ACTINS_ACT_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="413" mass="46515" checksum="4645564156531617" modified="2025-10-08" version="1">MSDSEYDNISEDFEDNDGESKGRVTDFSSVKPVVIDNGSGMVKCGISGEKAPKCVFPSIIGYPHEHYSSVMSGNQVECYLGDEAQEKRGMLSLKYPIEHGIVGNWDDMEKLWKYTFEDQLRILPDEQPVLLTEAPMNPKRNREKMTQIMFETFEVPAMYVAIQAVLSLYSSGRTTGIVVDSGDGVTHTVPVYEGFSIPHAVKRINLAGRDVTTYMMKVLTESGHEFTTSAEKEIVRDIKEKLCYVSQMTKLIANSTQNSKIDYEEELAKKGSDLEKEYELPDGQIIMIRQERFKAPECLFQPSLLGKEYSGIHKLTYESIMECDIDVRRDFFENVVLSGGTTMYNGLCERLSKDLAALAPPSVNVKVFAPPERKYSVWIGGSILSSLSTFSTNWITYDEFLESGPSIVHRKCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM0</accession>
    <name>A0ABV2AHM0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HIT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001035</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000215">
        <property type="protein sequence ID" value="MES1919171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01276">
        <property type="entry name" value="PKCI_related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="entry name" value="HIT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019808">
        <property type="entry name" value="Histidine_triad_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001310">
        <property type="entry name" value="Histidine_triad_HIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011146">
        <property type="entry name" value="HIT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23089">
        <property type="entry name" value="HISTIDINE TRIAD HIT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01230">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00332">
        <property type="entry name" value="HISTRIAD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="HIT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00892">
        <property type="entry name" value="HIT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51084">
        <property type="entry name" value="HIT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HIT" evidence="2">
        <location>
            <begin position="44"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Histidine triad motif" evidence="1">
        <location>
            <begin position="135"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="17110" checksum="8512DAD4C91FB925" modified="2025-10-08" version="1">MSYIFLFVSKCKAYKKHFPVHLWFPKSFMAEIGADPPTEPGESLFTKIITGKIPSDKVYKDEKCMAINDINKQAPTHIIIFPVKPIARLSEAEESDKDILGHLLLVARRIAREKQLDGFRIVINDGKSGGQSIYHLHVHLISGRNMKWPPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC6</accession>
    <name>A0ABV2AIC6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001113</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000240">
        <property type="protein sequence ID" value="MES1919254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7089" checksum="9FAB24CF9B22BE4B" modified="2025-10-08" version="1">MRAAVVASAIGSVYFIAAIVLLILGKSVKEIKPEIEESHMINDSEKEDSMVQIEEPEIVLSAAFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF9</accession>
    <name>A0ABV2AIF9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_001295</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000299">
        <property type="protein sequence ID" value="MES1919466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03213">
        <property type="entry name" value="ABCG_EPDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC2_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050352">
        <property type="entry name" value="ABCG_transporters"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041">
        <property type="entry name" value="ABC TRANSPORTER G FAMILY MEMBER 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48041:SF139">
        <property type="entry name" value="PROTEIN SCARLET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="353"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="395"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="429"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="468"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="504"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="585"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="18"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="649"/>
            <end position="673"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="689" mass="78248" checksum="FEA0A5EC79927937" modified="2025-10-08" version="1">MDTVENTRSITTPHFTTYRFKGLRYSIMVKKKEKIILDNINGFVETGQVLAILGPSGAGKSSFLTMLTGRIPKNAKAEGEILVNNVPIEHNTLKNISGYVLQEDLLYANQTVEETVQFSSILRCPKGYTDEDCKVKSDEVIRQLGLSNVRHTKIGNEFQRGVSGGEKKRVSIGVECVRNPSILFLDEPTTGLDSSMAYNVIESLSDLAKKHNKLVIFTIHQPRSNIFEMMLISKGKVVYFGEANQAVTYFANLGFHTPPGFNFTDYILDQTAPDYRTPESEVKSLKQIKYMHKKWEENRHKIELEIYSSGRASTGEFELKNLSTMRYQKRKDNICVQVPVLLKRQLTEYFRNYVLIAGQIFQQIIAALLIGGVFFNLKSDFAAVQNIQGVLFYMTLNQTVTPMFEMISVFFVTKFVYLREYNADFYSCFSYYISTYIVNSMMQPVYSLAYAGIIYLMAGLRRGARHFFILYAALILCKYCSTSFAFLMSCAFSKYQYAQTVTPVMLYLFTLLGGLYINLNAIVQPFNFLQYLDFLRYAYQVLLNNEFEGRSFACSSSATATVCPVPGEAIIDKVGLRIDNFVEPMLAMVAIMIGVAILGALALWLRTPRFKKLNKKTHYSNIDNSINDDEDMDVDIENNGENIEENETVDVDIKNNGANIEENGTELKDKEKIEVREENEVGIEKNGEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIL1</accession>
    <name>A0ABV2AIL1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">OBG-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000954</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000195">
        <property type="protein sequence ID" value="MES1919087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045001">
        <property type="entry name" value="DRG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43127">
        <property type="entry name" value="DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="3">
        <location>
            <begin position="50"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="104"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="118"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="151"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="170"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="25751" checksum="222E3650065BE619" modified="2025-10-08" version="1">MDRTQKNKATMGHIGLLKARLAKLKRELLLNSSSAGKSGEGFDVSKSGNARVGFVGFPSVGKSTLLTKLTNTVSKAADYEFTTLTCVPGSMVYKGCKIQVSSLTEAARPPGNHRRGQRREGEREAGHRSGPHVRSAAVNLGRGETDADEETDRKRVGRLRDSAKQVSPGHKGDEERKRGVVCDEDGATEQFDRQTNRRNLQRIQSGFGRSRFAVRCLRRRFDRRHRRKQVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIM9</accession>
    <name>A0ABV2AIM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001346</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000318">
        <property type="protein sequence ID" value="MES1919531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="53" mass="6150" checksum="F3A48A581A59E0B1" modified="2025-10-08" version="1">MDVSLKHGQLLSSLSQNLAWKKNRNRFERCLLLNTLTTFFKLKNATEILLGML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN1</accession>
    <name>A0ABV2AIN1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001331</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000313">
        <property type="protein sequence ID" value="MES1919513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="12222" checksum="9343BC6979EFC03F" modified="2025-10-08" version="1">MATEANPCKSKMCKIMLCKMFQLEDSLNFDFDNPAIKTPRDDNLNFRALETFDLKLEKTNSKKDKTEDEMIKKFVKREKDIFNVDEAQNFTKFLAKKWKSKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR0</accession>
    <name>A0ABV2AIR0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mediator of RNA polymerase II transcription subunit 7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001184</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the Mediator complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the Mediator complex subunit 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000258">
        <property type="protein sequence ID" value="MES1919334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037212">
        <property type="entry name" value="Med7/Med21-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009244">
        <property type="entry name" value="Mediatior_Med7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044888">
        <property type="entry name" value="Mediatior_Med7_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05983">
        <property type="entry name" value="Med7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140718">
        <property type="entry name" value="Mediator hinge subcomplex-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0010">Activator</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 6" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="17170" checksum="093E8741BF28113C" modified="2025-10-08" version="1">MKFPDPPNHYKNSEKELSENYKIYENLLKHGNFRKFGETFDFETPQNIKALNNVDSKNDLLSLNMKDMEIFTELLKSISRSDFSQIDETVKNLNENFSQSFHLLNSMRRYQALKTLETDLDIKNDYLDDKIEALKMFLSKCKKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIS4</accession>
    <name>A0ABV2AIS4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">TP53RK</name>
        <name evidence="12" type="ORF">MHBO_001384</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. BUD32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000330">
        <property type="protein sequence ID" value="MES1919576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022495">
        <property type="entry name" value="Bud32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03724">
        <property type="entry name" value="arch_bud32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12209:SF0">
        <property type="entry name" value="EKC_KEOPS COMPLEX SUBUNIT TP53RK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12209">
        <property type="entry name" value="NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="1"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="24434" checksum="E77BE69D7C2CB43A" modified="2025-10-08" version="1">MEFIKQGAESKVYLKKQGGEKVLVKERLVKEYRHFDLDRVLTKRRIKSEVKALEKARSFNILVPKVISRNLKERTITMEFIEGPTLKDYLRNLDKNSSDFDDNIKLIASKMAQIVKTLHEGGVIHGDLTTSNFIVKNGDINNIAIIDFGLSLISKKAEDKAVDLYVLERCFISSHTNLTNLVTQIIKLYGLSNDDVINKLKEVRLRGRKKMAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ81</accession>
    <name>A0ABV2AJ81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Anamorsin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">CIAPIN1</name>
        <name evidence="11" type="ORF">MHBO_001332</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the anamorsin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000313">
        <property type="protein sequence ID" value="MES1919514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007785">
        <property type="entry name" value="Anamorsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046408">
        <property type="entry name" value="CIAPIN1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13273">
        <property type="entry name" value="ANAMORSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13273:SF14">
        <property type="entry name" value="ANAMORSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05093">
        <property type="entry name" value="CIAPIN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Anamorsin C-terminal" evidence="10">
        <location>
            <begin position="59"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF05093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="10855" checksum="C2D5F50992FC311C" modified="2025-10-08" version="1">MSKLSEIIDENSLIEDDLKPIAQAQPNEQKAKKSINERLRKPCKNCTCGRADSQKNNSASSKKSACGSCYLGDAFRCSECPYLGTPPFKPGETVKLDLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ94</accession>
    <name>A0ABV2AJ94_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PNPLA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001522</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PLPL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000387">
        <property type="protein sequence ID" value="MES1919745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1090.10">
        <property type="entry name" value="Cytosolic phospholipase A2 catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050301">
        <property type="entry name" value="NTE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14226">
        <property type="entry name" value="NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14226:SF66">
        <property type="entry name" value="TRIACYLGLYCEROL LIPASE PTL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="FabD/lysophospholipase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="4 5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="6">
        <location>
            <begin position="32"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="5">
        <location>
            <begin position="63"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="371" mass="41372" checksum="77C0EB38BDD24C2C" modified="2025-10-08" version="1">MVTEIKNSEDITKQRKIKFFEKIISDNGETAICLSGGAKLSFFHIGLILELVKTDLLPNIISGTSGGAISAAFICVRSNSEIVQMKNETNILKDIFQTSLARVARKNGSLLEKENFTKRIKELCLGNTTFKEAYRKTGKVLNIPATKLNSNKDPVMLNYRNSPDVCIWSAVMASTALPKVLPPGELFVKRQNGSIEPYNSLGKLWLDGSYQSDVPLRQLREKFNVTYTIVSQTNPHVAPFALQNTGSGGEPPEHRSGNGLKGGFVLSALEIFLRIEMRKWIIVLQKLGIVPLLGGYDLSQIVVQKFSGTVTIYANLGMFDYLNILLTATEKEVLSLVERGKKAFWPKRKMISNRVLLEKTLKKFLADLRDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI4</accession>
    <name>A0ABV2AJI4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001602</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000418">
        <property type="protein sequence ID" value="MES1919846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="65" mass="7267" checksum="CA4AF4B342DB560D" modified="2025-10-08" version="1">MSQLLLGTRHSKSKVNGAFRSLNSIMLVFLSQVKSKYSSKKASWKKYFPFGQNNLVSPGSKAFPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJP2</accession>
    <name>A0ABV2AJP2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Methyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001468</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the methyltransferase superfamily. METTL23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000364">
        <property type="protein sequence ID" value="MES1919679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019410">
        <property type="entry name" value="Methyltransf_16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14614">
        <property type="entry name" value="HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14614:SF164">
        <property type="entry name" value="HISTONE-ARGININE METHYLTRANSFERASE METTL23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10294">
        <property type="entry name" value="Methyltransf_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00043988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="211" mass="23586" checksum="11C26844C1646D97" modified="2025-10-08" version="1">MIKMSSRKYKFGSIDIALVDQTEIDYGCCTWQSALIMADFIIDNKNLFVDKIVLEIGAGAALPGILCSKIGCSVVLTDIEYKHEKMVYKTALNNCKINRVDAKMDVLDWNSAFIGALDKFDRNVAILGSDVFFSSKDFNNILSTISAILEICPNSIFYSVYQIRSLSKNIKLINCIDKLGLVLKKDHFIAENNESSFVVLEIARKSKEASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJV4</accession>
    <name>A0ABV2AJV4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PIR Superfamily Protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001696</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000458">
        <property type="protein sequence ID" value="MES1919954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="98" mass="11524" checksum="B4E249CD5120BEB2" modified="2025-10-08" version="1">MERKEKANMKTTKEETILEIIEDTSDDPFNKKNLLLFTEYINEQCSPQYSNLKNCLEKYQGFGAIFCLKENAKLKLCESNMSIFQFLSNFNIFLSNFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK25</accession>
    <name>A0ABV2AK25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000412">
        <property type="protein sequence ID" value="MES1919824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="22020" checksum="D874AFCA232F49F2" modified="2025-10-08" version="1">MALNSNIKQTKTESEIKTPSKNQTKQKSEDLNYFIELSKNPKLSEYDKIALLKLFANFLIRNKNLTLDKTNENFKSAVLSFCRLIENAPEKQAIYHSLKISKFSKHKIPFLEFMFEAIEKSLHSKNPFFFSAEIFCRLLKSSKNDDKLLKINFVPTFQNLFIKFVQNENSSEDKNYFKTFWFCCPII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK31</accession>
    <name>A0ABV2AK31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Importin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001763</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the exportin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000485">
        <property type="protein sequence ID" value="MES1920035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044189">
        <property type="entry name" value="XPO4/7-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596">
        <property type="entry name" value="EXPORTIN 4,7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596:SF2">
        <property type="entry name" value="EXPORTIN-7 ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50166">
        <property type="entry name" value="IMPORTIN_B_NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="8">
        <location>
            <begin position="32"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1920035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="304" mass="34827" checksum="77084CE3D35F4BBF" modified="2025-10-08" version="1">MSSDMDEFTRNVFENCKVAFSPNSSNDDRQKASIFLQNLGETDASFLVILEKIFSATTTPEILIFFSNLTLKTIEKFWGSIETSFLLNLRSFLIEYLKNAKIDKKSVINCIARVPCRIAKMGWTEDIRYKNMTETIASFLSTDIATCNRGILVLSIYIEEINKSGNTNRIKNRRISSQFRDKELFNIFKLSVVVLNRIIRDNNFGISDQEGNSLVESALDLTSNCLNFDFIGTIRDESSDDLKSLQIPEKWSELLNPSYSDDNKNHIVKICFQILRLMAKSDFPEFIKSKCICKVFGQILLSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC2</accession>
    <name>A0ABV2AKC2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribosomal protein L16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001802</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000505">
        <property type="protein sequence ID" value="MES1920082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01433">
        <property type="entry name" value="Ribosomal_L16_L10e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.10">
        <property type="entry name" value="Ribosomal protein L10e/L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047873">
        <property type="entry name" value="Ribosomal_uL16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000114">
        <property type="entry name" value="Ribosomal_uL16_bact-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016180">
        <property type="entry name" value="Ribosomal_uL16_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036920">
        <property type="entry name" value="Ribosomal_uL16_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01164">
        <property type="entry name" value="rplP_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12220">
        <property type="entry name" value="50S/60S RIBOSOMAL PROTEIN L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12220:SF13">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL16M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00252">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00060">
        <property type="entry name" value="RIBOSOMALL16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54686">
        <property type="entry name" value="Ribosomal protein L16p/L10e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="168" mass="19467" checksum="4CBA553E388AF3FF" modified="2025-10-08" version="1">MLRFNKPKKMILNDFVLKINKRFAASNLVPKKPKYMKAPKKKVKGTNFNVNANSVIFGTHGLQAIESGRIKNRGLEFMRDILSKRIDKRSKFWLRVFPHWPVTKKDIGSRMGGGKGAVDHYVCRIKKGMVIFEIETLHAKDEEAEKIFKAVIDQMPLKARVIKRRLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD8</accession>
    <name>A0ABV2AKD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000511">
        <property type="protein sequence ID" value="MES1920097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2310.50">
        <property type="entry name" value="Protein of unknown function (DUF3228), domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021610">
        <property type="entry name" value="DUF3228"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38666">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38666:SF2">
        <property type="entry name" value="FLAGELLAR ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11539">
        <property type="entry name" value="DUF3228"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23284" checksum="87E127963AA15DC7" modified="2025-10-08" version="1" fragment="single">NLYRLKMSKNLCVVDSFCLKLFENKTINISPSKFENKINQLFRDKKIKLLDGYAPFCKHLIVPNFVDNCFSSILPITAKNRHLLTTKYLARTAKELPVMVRYFKASENTLKRATFLDVILYDREQIRKENKATGTETTQKEPFGIVSVKPQLTEEELPMEPITMMRNALPLQEGGSGVALDHSLYQKSVQFWSENAKVVFDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKI2</accession>
    <name>A0ABV2AKI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000547">
        <property type="protein sequence ID" value="MES1920201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14694" checksum="927066CB72835175" modified="2025-10-08" version="1">MKLSISDFSHEVVPELCALPEYDENLNMKCKYNEDLELTECFVWCTNSFVGEEMRKYIKMTCLFNQWLAELNYNDGYLMLPFDIKTLSCFKYASEYNEYNYILLIYIFYVYNLCSQYSNLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL9</accession>
    <name>A0ABV2AKL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001727</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000471">
        <property type="protein sequence ID" value="MES1919994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.10.10">
        <property type="entry name" value="Trypsin Inhibitor V, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021719">
        <property type="entry name" value="Prot_inh_I78"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11720">
        <property type="entry name" value="Inhibitor_I78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10615" checksum="1475BE54B2911207" modified="2025-10-08" version="1">MVMPKFDSLGRDLNETDMPVLRLFFLGQKVVLDDKEYFEAKTGLLEKEFDVIPNTIRIIRNGCCYTMDLNKSRLNFFLNEKGEIFRIRFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ3</accession>
    <name>A0ABV2AKQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001954</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000577">
        <property type="protein sequence ID" value="MES1920265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="23486" checksum="16CDAB274869BF4C" modified="2025-10-08" version="1">MIKSEAILSILEKQEKTFSEIFKEIRYLHKNDFNLTKIQQKLITLLSNKELNLIQTFSALYILFLCEQNNSNRPFISNPFLPFLLNYFWERSENYFPEAHFMYNQFLQLQNYEKSTVKEEIEKAFNNENFELDVLAKKQLLMLQKTIFDDNNFAEISSDPIWRAKTTFENFDEKDAAPCFAKLFPEINFDDTNVYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX2</accession>
    <name>A0ABV2AKX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001991</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000602">
        <property type="protein sequence ID" value="MES1920308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="88"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="9945" checksum="E0BAAEC60E550D50" modified="2025-10-08" version="1" fragment="single">MPFCPPFGNNRNNFSNDYSNSCYPPRGPPGPPGCPGMPGFNLVGPVGRPGCVGPIGPKGPQGFSGCHGMPGYPGMAGLNGRRGKKGPKGVPGKRGYCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL92</accession>
    <name>A0ABV2AL92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002121</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000680">
        <property type="protein sequence ID" value="MES1920456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1112">
        <property type="entry name" value="COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="134"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="13988" checksum="8DD3288ECDD468DB" modified="2025-10-08" version="1">MDYNYEDKCKQHVVPGPAGPPGPQGPIGVPGETIVGPQGEKGLVGQFGATGKPGEQGLPGPSVKGGPGAQGNPGPDGPPGPPGAPATIGPPGPQGDIGPVGPPGPVTPGEQGETGDRGVPGNPGPPGFNGLQGPPGPPGPPGPPGPPPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA4</accession>
    <name>A0ABV2ALA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002112</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000675">
        <property type="protein sequence ID" value="MES1920443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045885995" evidence="2">
        <location>
            <begin position="23"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13507" checksum="6A0BBDDC976E616A" modified="2025-10-08" version="1">MTFELLMFLRIVMSKLPPPIMGQSNDRENYYLAIILLLCTVILILVISRNVSRNNANAFVKLFLSKLHRNLHSNARTREIFTQPSMLVRVDDNVFEQGKVVGFINSKGEHIFESKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD2</accession>
    <name>A0ABV2ALD2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DNA helicase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002095</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000664">
        <property type="protein sequence ID" value="MES1920427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18026">
        <property type="entry name" value="DEXHc_POLQ-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18795">
        <property type="entry name" value="SF2_C_Ski2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050474">
        <property type="entry name" value="Hel308_SKI2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47961">
        <property type="entry name" value="DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47961:SF6">
        <property type="entry name" value="DNA-DIRECTED DNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="179"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="7">
        <location>
            <begin position="382"/>
            <end position="544"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="544" mass="61374" checksum="4660FDF02F17499F" modified="2025-10-08" version="1" fragment="single">MRPNDKADLKGVRKRLLFWGRPKSKVFKRPFELKSKLRKATKQTNCLAKVNIDSPDANQNKFFEQNPATPVSKQKRSSLNYASKRPNGRWYRKKGQQSKYIAINGKVFEGFQAFKQSLLDKESVKKRLELESAQNKNTIRNKENEHLLKTYGIPAEMDRVYRQKGVNRLHQWQIACLKKKGVLEGKNLIYSAPTSGGKTLIAETLMIRRMLSKKGKCIIVLPFISLVQEKSEDLRNKLCPLGFSVRSLHSSSPLTLPNNVDVIVCTIEKANLLANSLMDDGTIKNYFGTVIIDELHLIGDEHRGFILELLLTKLKTVGGEHQIIGLSATLPNIGDLAKWLDAELFVTDFRPVPLTEFYLIGSTVYSKAGKRIKEMGKNSADNIFELCKEVVEKEKSVLIFCPSKDGCKRSARMLLDKAKSSNSKATDNDELTKRKTVLERLRQLPIEICEVLKEAILYGIAYHHAGMTIEERDIVEAAFRKRTINVLNATSTLAAGVNLPAFRVIFRYPYVGANFISVSKYQQMSGRAGRSGIDDRGESFLVAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD3</accession>
    <name>A0ABV2ALD3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002142</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000691">
        <property type="protein sequence ID" value="MES1920477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="226"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="240"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="29678" checksum="2935B8F0AD9848F4" modified="2025-10-08" version="1">MEKKENVADDEDVDENLKREAPNKEERDQDDDEDNFIDIRNERKLFSKQNVNSRMPPIKSKKKVAKRRKAPSNKKRAGSVVKRKRKHKNQRKDHQRAKLSSSRQHKRVKMRNPKIAKNRKNKKSGPGKKKKVDKKYRSEIESDEDEFMDAEEKASMVVTLISDPNEIDPSTLEDAEQHDNIYANFALFMLLVIFVVLIVVFRTCRKTNSVTQRAAMIAFIPQSPGIKKSLSESNKQAPMDQPPPYSPSKPPAQQYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ4</accession>
    <name>A0ABV2ALJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000580">
        <property type="protein sequence ID" value="MES1920273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="51" mass="6195" checksum="CDC9006197BB4BFC" modified="2025-10-08" version="1">MIRKEIVNQLRKCPKSLIILNDLQKMDMSIFENLEDFFEGTAYTESFYKRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ6</accession>
    <name>A0ABV2ALQ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH CENPB-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002253</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000757">
        <property type="protein sequence ID" value="MES1920601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006600">
        <property type="entry name" value="HTH_CenpB_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03221">
        <property type="entry name" value="HTH_Tnp_Tc5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00674">
        <property type="entry name" value="CENPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51253">
        <property type="entry name" value="HTH_CENPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH CENPB-type" evidence="2">
        <location>
            <begin position="67"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="17740" checksum="5AAA83F55C12A683" modified="2025-10-08" version="1" fragment="single">MRKRLSMQRRFHLACMVRSGAPFEEVATSFSVGLPYVRRAARDLVPFLELLDRSEFYVGRGGVPSRPAATVTREQYSELNAISLQVYRRLAAARHVLSETKLKMVGLAVARRLGLGNFKASNGWLERFKKRNSIGPSRVRCLRKKGNLGGFIQESKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT4</accession>
    <name>A0ABV2ALT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002294</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000784">
        <property type="protein sequence ID" value="MES1920643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23025" checksum="799A085144E2EEB1" modified="2025-10-08" version="1">MTKSKDFLNEKIVSVFPVSALDCVSQRCFGFGLTNKNSRIFFSFDDKKNLVISGINQKTVLAEGEKIEKAYFQDKILLVSSHKNQNEDRLIALCSDSTSKFNKETEKENLDETKENIPKDENNLEKFEIFESSDNFTENEKILALSGAPSFRRRIDLAFYCYNSSSLNKKPLFGLSEASLDVFSASKLYFALTEFILFSSHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM81</accession>
    <name>A0ABV2AM81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002416</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000860">
        <property type="protein sequence ID" value="MES1920779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="456" mass="53797" checksum="75C29E669D26723C" modified="2025-10-08" version="1">MVLINATRNFRKQTKQRFVTFLKSDLKTDLLFAVNSDNNFYVFDQKAKYPFSLMATKPVFGRSHKKQLDSLIENNFKLCLTKSAQNFDHYSLIIFSKFRHKNFYSSHLITIFDLKITENNNNGTPKKKIFLKRTTEKNLENDFYAIKSIKFTEKQIFVLSMSENREETLNFCTLDKILEHAKIKWTRIRTKKGITLPKKELLTQKNRTKQILVKKFLENFLKECAIFMPKAVLQLKINFAVRNLDIEIFNFRKIGIPKYIDFEKLCRFVSSVIELKQKPFFDEAKFAFDVFDEAKYPFNPNSKNRKNGDFGSIWIYGSNGLTQITENDWNGVFFGNNKLSKNGENEIEFSRTKSSNEFLRLFSETDFDGKTNNSAILQKMLQKILQKALKCPKVFVDFVQKMKKYCTIFPNFGGKLDCEDKLNLRAKKDFFKFKLFVFSRLKRLLKAVFDDKKVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMA2</accession>
    <name>A0ABV2AMA2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000874">
        <property type="protein sequence ID" value="MES1920805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13755" checksum="D20B5EBD2EE0F9EC" modified="2025-10-08" version="1">MCESSLKHQRELLNGLSMAWSDSETSRSAVDKLLRCLHSVKLLDYEGFSEWRHWLPSAGIDPRLSSARRKVMLAATNFLDVDLELLHERFIARQKEEWSESEYSDFSGEEKSDFDEDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AME9</accession>
    <name>A0ABV2AME9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">HSF-type DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002463</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the HSF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000897">
        <property type="protein sequence ID" value="MES1920836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000232">
        <property type="entry name" value="HSF_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015:SF427">
        <property type="entry name" value="HEAT SHOCK FACTOR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015">
        <property type="entry name" value="HEAT SHOCK TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00447">
        <property type="entry name" value="HSF_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00056">
        <property type="entry name" value="HSFDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00415">
        <property type="entry name" value="HSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HSF-type DNA-binding" evidence="5">
        <location>
            <begin position="3"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="370" mass="43740" checksum="9D062E2DC1D890C4" modified="2025-10-08" version="1">MYKIVPFIESLWKLVNDERTENIIKWVNPSAFEITDINLLELLLPSFFKHNKYSSFARQLNLYGFERSKTSQNRMIWSHPIFLQGRHDLLKKIRRKSKNSQSVQILPLNNEFSHTKTIFGEMDQGQKDKELIIKKMRKELEVSNNKAKLLEILVYRIYKFFSEDKNGKMLEPNQHFKNFLNRNNDIDVKSLLDYNKEKTIDEKFGELLPKNTPSKNSQRSIISEYFNNEILPAPTPNIVQYPKNWPKLDIFDMSKNNLDAADSEMKSIQNFENNHGDFLNEVENSNNMNLRGKIDLIRINNKEIDFQKSKITAELLQYLRYLLRMYAKSNDKINLNDFNGFGCWFKNDLTGNRIGFGADEQGIFLYNYNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH2</accession>
    <name>A0ABV2AMH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002489</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000920">
        <property type="protein sequence ID" value="MES1920869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14151" checksum="EF7D42BFCBC8D0C9" modified="2025-10-08" version="1">MAKAVDAKDDSKNFFKEIWNVFTLFFERIKETKPLFTVGAEGCKDKDSMILVSNAVTTKKSWSFEDIENMILKEKGRNLVPTSTSEPIFKIIKFFFRENSSIIVKLFFEAMGSSIDRMCRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV2</accession>
    <name>A0ABV2AMV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002298</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000785">
        <property type="protein sequence ID" value="MES1920647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7262" checksum="82E5D09F3E30BE2E" modified="2025-10-08" version="1" fragment="single">MNIEINEDEIVISSSDSYDSELYRDSDDYEALNRLTEIEREKVLNSRAESRSRHQKRKKAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG7</accession>
    <name>A0ABV2ANG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Vesicle trafficking between the ER and Golgi</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SLY1</name>
        <name evidence="3" type="ORF">MHBO_002773</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the STXBP/unc-18/SEC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001156">
        <property type="protein sequence ID" value="MES1921210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001619">
        <property type="entry name" value="Sec1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027482">
        <property type="entry name" value="Sec1-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036045">
        <property type="entry name" value="Sec1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11679">
        <property type="entry name" value="VESICLE PROTEIN SORTING-ASSOCIATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00995">
        <property type="entry name" value="Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56815">
        <property type="entry name" value="Sec1/munc18-like (SM) proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="162"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="169"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="374" mass="42224" checksum="7964F778A96F1F6D" modified="2025-10-08" version="1" fragment="single">AVSKMVNDYRKIQEDFRSQPKNRSQNPNLLETISDLPKIQRQKILTDRHTAVASALSKKLSRRRLAEFFLVEENLIQGKKLNLKKAKSLLSSETPTTNDKLRLLLIYLIKNPTNIESFEQIAEIYFEGLKNKKQITEQNEIAKSGKAISSIKKLLFIDDDNENNNNDNNKLEKNSLKTKPENPINPITNGNDNDQNTFISKFFRKGGINMINSKATELTENLWKNVVDKSAQIFAEVKNMLPTSKLSPLSRIVDEITTNRLSARKENGFLSFSENDEKAISNNKKVAFATIDPQVLEKEKNFGTSFGTRFGREKVIVFVVGGGSYVEFQNLEDFANGKFGVSEFGFGGDGVLYGATEMVAPEDFLVDLENCFVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ3</accession>
    <name>A0ABV2ANJ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002504</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000932">
        <property type="protein sequence ID" value="MES1920887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="14110" checksum="FC8A69319047DCE2" modified="2025-10-08" version="1">MVFDRTQKSDSDYNFADDDSDHDEFETLKSPKLAQNMATFKLNLESPETTQQSLAYYKKSAETWTVEQISDEISNLTEELEDIKKSKRFKLESALFKLFFQFCIKFINFGFHCQNRFFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP14</accession>
    <name>A0ABV2AP14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002948</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001333">
        <property type="protein sequence ID" value="MES1921417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="5"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13995" checksum="273CCEFBD107B148" modified="2025-10-08" version="1">MENSLKQLNSDNNAKNLKILELKKQLKNFEEQKTLFAEKESLRFDKIMREIDLISKNNEKLAKEKELMEEALKNQIQHLLEENSRIRVNSEIRLEENKKLLLKSFQESLSFSNFLDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP60</accession>
    <name>A0ABV2AP60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ELAV-like protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ELAVL1</name>
        <name evidence="6" type="ORF">MHBO_003002</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001380">
        <property type="protein sequence ID" value="MES1921471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="132"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="21634" checksum="194E4BA2A2A4D182" modified="2025-10-08" version="1" fragment="single">MSEKNNDPNILRNMPHGLHKLFGTGDNGTTSFKEPPEIAANSDKAIRRESTMILPPTLNPDNLFDPDKFVSDRTKIQSSDNKSENLADPVAVEFAAFGPNCYNQNNPKQGQTAFNADYYYAINEQSKNLSKNNLYVGGIPAHYMQSDLLNIFKEYGNVTSVFITRAGGIAFVEFEKEESAQRAIAAQNNNIPPKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP69</accession>
    <name>A0ABV2AP69_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">rRNA-processing endoribonuclease, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RCL1</name>
        <name evidence="2" type="ORF">MHBO_003006</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001385">
        <property type="protein sequence ID" value="MES1921477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.20">
        <property type="entry name" value="RNA 3'-terminal phosphate cyclase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.360.20">
        <property type="entry name" value="RNA 3'-terminal phosphate cyclase, insert domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013791">
        <property type="entry name" value="RNA3'-term_phos_cycl_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037136">
        <property type="entry name" value="RNA3'_phos_cyclase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000228">
        <property type="entry name" value="RNA3'_term_phos_cyc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036553">
        <property type="entry name" value="RPTC_insert"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11096">
        <property type="entry name" value="RNA 3' TERMINAL PHOSPHATE CYCLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11096:SF1">
        <property type="entry name" value="RNA 3'-TERMINAL PHOSPHATE CYCLASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05189">
        <property type="entry name" value="RTC_insert"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="EPT/RTPC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA 3'-terminal phosphate cyclase insert" evidence="1">
        <location>
            <begin position="170"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="30548" checksum="37D9481FB389CE40" modified="2025-10-08" version="1">MQKFANFSNFRYRLIFAILSGKKIAFALNKNSRLNLHQNTFLDLCKKICNDFYTDIDKNYLVINPGTIVNGTDIEFDCGYEKPIGYFIEGILVLALFGKNDLKITFAGKTSSFGNISVDFAKNLVETLKHFGANNCVLEIKKRGSCKEMPAEISLIVSVVKSLKQVNLVDSGHVEKIRGIAFCEMVPPAIANRMSITAKKILKDFLPDVWIFTEAFNRKILINKEDKNFGICLTAESSTGSLLSGEECLHDSLSPEEVAERATKFVLKEISHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP84</accession>
    <name>A0ABV2AP84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">U3 snoRNP protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UTP18</name>
        <name evidence="6" type="ORF">MHBO_003021</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001416">
        <property type="protein sequence ID" value="MES1921493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045161">
        <property type="entry name" value="Utp18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18359:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18359">
        <property type="entry name" value="WD-REPEAT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="3" id="KW-0853">WD repeat</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11453" checksum="AF2BFF127230DB1C" modified="2025-10-08" version="1" fragment="single">MPIVSAKFIEKGEKILISGKTSYFMVYNFSNGSVDTIKTFRGNVKNGGKLLVSPTYTNFALTEDFGSVRIFDAVSQKETNRIRINGTVRQACFSADGKRVFAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP85</accession>
    <name>A0ABV2AP85_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003014</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001407">
        <property type="protein sequence ID" value="MES1921484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="267" mass="31515" checksum="F0ED44D73C99664B" modified="2025-10-08" version="1">MVQINVLFQNSFKIDLDDKITVQNLKKKIIGEHFPTQFKLIKNGLILSENDFIAKNDKIFLNTTNNRLSPKESYLFSQLILLISQIDPKNDEMNNKLYVGFFNGSKSFLRNKSFAEHGKTFNQIAISVANYAAKVIILDKMDHRTALFTFIYFKHELKKILDKFEGSLENYLNFKKMATKFVGKWIREISSFYSDGILSVKKRLNVWTEIIDKDVENNCLLDRKTFVESLLRFYRDFCVDLYSKKKKPENRKNFGFYSKFERNLLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE8</accession>
    <name>A0ABV2APE8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Endonuclease III homolog</fullName>
            <ecNumber evidence="7">3.2.2.-</ecNumber>
            <ecNumber evidence="7">4.2.99.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Bifunctional DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase</fullName>
            <shortName evidence="7">DNA glycosylase/AP lyase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">NTH1</name>
        <name evidence="9" type="ORF">MHBO_002831</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>2'-deoxyribonucleotide-(2'-deoxyribose 5'-phosphate)-2'-deoxyribonucleotide-DNA = a 3'-end 2'-deoxyribonucleotide-(2,3-dehydro-2,3-deoxyribose 5'-phosphate)-DNA + a 5'-end 5'-phospho-2'-deoxyribonucleoside-DNA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:66592"/>
            <dbReference type="Rhea" id="RHEA-COMP:13180"/>
            <dbReference type="Rhea" id="RHEA-COMP:16897"/>
            <dbReference type="Rhea" id="RHEA-COMP:17067"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:136412"/>
            <dbReference type="ChEBI" id="CHEBI:157695"/>
            <dbReference type="ChEBI" id="CHEBI:167181"/>
            <dbReference type="EC" id="4.2.99.18"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the Nth/MutY family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.-" evidence="7"/>
    <dbReference type="EC" id="4.2.99.18" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010001212">
        <property type="protein sequence ID" value="MES1921278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140078">
        <property type="term" value="F:class I DNA-(apurinic or apyrimidinic site) endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00056">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1670.10">
        <property type="entry name" value="Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.340.30">
        <property type="entry name" value="Hypothetical protein, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03183">
        <property type="entry name" value="Endonuclease_III_Nth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003265">
        <property type="entry name" value="HhH-GPD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023170">
        <property type="entry name" value="HhH_base_excis_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000445">
        <property type="entry name" value="HhH_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030841">
        <property type="entry name" value="NTH1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43286">
        <property type="entry name" value="ENDONUCLEASE III-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43286:SF1">
        <property type="entry name" value="ENDONUCLEASE III-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00633">
        <property type="entry name" value="HHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00730">
        <property type="entry name" value="HhH-GPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00478">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="DNA-glycosylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6 7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HhH-GPD" evidence="8">
        <location>
            <begin position="95"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="30718" checksum="FB55828922DE20AC" modified="2025-10-08" version="1">MRNTKSKLLQKQAFKCKPLKRKAINDFGTKKILKFGKSAKNQPENWIKVYKNIAQMRINGCAAEADVDIEGCSSTFDKTESRKVQRFQILVSLMLSSQTKDSITAQAMSNLKRNLENGLNLESVLGSDVLRIEKEISKVGFYKKKAMYIKEAAERIKTDFSGDIPKNVEDLCSLKGVGEKMAYLAMQVAWNKVVGIGVDVHVNRISNRLGWSNKKHPNKTRKELEKWLPFELWGHINHLLVGFGQKVCFAKKPNCHLCTVKDLCTLGKNIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG7</accession>
    <name>A0ABV2APG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cysteine-rich protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CRIP1</name>
        <name evidence="6" type="ORF">MHBO_002790</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001172">
        <property type="protein sequence ID" value="MES1921232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46074">
        <property type="entry name" value="CYSTEINE-RICH PROTEIN CRIP FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46074:SF5">
        <property type="entry name" value="LIM DOMAIN-CONTAINING PROTEIN C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00132">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0440">LIM domain</keyword>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LIM zinc-binding" evidence="5">
        <location>
            <begin position="4"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="12806" checksum="F412339D7AF24DD6" modified="2025-10-08" version="1">MENPKCRKCEKAVFFAEKVSYGGINWHKACFRCEICSKTLTKGKQQELNEKIVCASCYEKNKPVLRKVYRPRKTNEEEKEQIIIEKCTLCEQNLEPSMNFCSNCGNKSNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APU8</accession>
    <name>A0ABV2APU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Mitochondrial carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002959</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001340">
        <property type="protein sequence ID" value="MES1921428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47567">
        <property type="entry name" value="MITOCHONDRIAL SUBSTRATE/SOLUTE CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47567:SF1">
        <property type="entry name" value="NAD-DEPENDENT EPIMERASE_DEHYDRATASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="18306" checksum="423E644EC1B66D8D" modified="2025-10-08" version="1">MPIDASKTSLQVHGKDGFRKLIQKVKTARSPSVLYHGALAAYSATLVGHFPWFFTFNTLDKHLPKRDDNIWYKLARRALMGFVSSVISDSISNSIRVIKTFKQTSPVPITYPNAVKTVYAKSGLVGLFGRGLKIRIATNGTQGLLFAILWKGIMDIVLKEKPAKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW7</accession>
    <name>A0ABV2APW7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003246</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001673">
        <property type="protein sequence ID" value="MES1921715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11451" checksum="1A525EB299857209" modified="2025-10-08" version="1">MVEVKNCLQESQKNFSSHPQFITEIRAQHKDPKPFLKDLFRYLKRIFFIEKQTVPLKRVLKFVARIATFPTTDHNGRNWVDVYSSGLILFKNLHFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ5</accession>
    <name>A0ABV2APZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AFG3-like protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">AFG3L2</name>
        <name evidence="1" type="ORF">MHBO_003267</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001699">
        <property type="protein sequence ID" value="MES1921738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5886" checksum="C64DC3E051027DA5" modified="2025-10-08" version="1">MISKKDKIKALADKLIERETLSHDEIVDILGPKPHQNEDYQKYIKSTKFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ44</accession>
    <name>A0ABV2AQ44_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Dihydrodipicolinate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">DAP1</name>
        <name evidence="4" type="ORF">MHBO_003336</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cytochrome b5 family. MAPR subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001786">
        <property type="protein sequence ID" value="MES1921801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.120.10">
        <property type="entry name" value="Cytochrome b5-like heme/steroid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001199">
        <property type="entry name" value="Cyt_B5-like_heme/steroid-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036400">
        <property type="entry name" value="Cyt_B5-like_heme/steroid_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050577">
        <property type="entry name" value="MAPR/NEUFC/NENF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10281:SF76">
        <property type="entry name" value="CALCUTTA CUP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10281">
        <property type="entry name" value="MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00173">
        <property type="entry name" value="Cyt-b5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01117">
        <property type="entry name" value="Cyt-b5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55856">
        <property type="entry name" value="Cytochrome b5-like heme/steroid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047458115" evidence="2">
        <location>
            <begin position="20"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome b5 heme-binding" evidence="3">
        <location>
            <begin position="36"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00038357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15587" checksum="246EF3CE55CC9FF3" modified="2025-10-08" version="1">MLQYFAIFLIILFSLPLLCKKTEKPIRKVKKENLKLNLKQLNKFNGIDDERIFISINRKIYDVSKKRTYYGPDGPYSPFAGHDATLAFAKHSLDESFLDYFGKMDLSEDEKSNLDSFLELFDSSYQIVGDLVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ48</accession>
    <name>A0ABV2AQ48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003312</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001756">
        <property type="protein sequence ID" value="MES1921784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11660" checksum="3251A169E89035B2" modified="2025-10-08" version="1" fragment="single">MYSHYDDYSLFFLKARLRNKRCFYEHAFCLKCLSECISSQNSHLKTGTVDDEYCCPVKKCNVKTPVRCIAEIRNALINSNEKVFVLCFSPSQNAKYDLQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH8</accession>
    <name>A0ABV2AQH8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003453</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001947">
        <property type="protein sequence ID" value="MES1921925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013657">
        <property type="entry name" value="SCL35B1-4/HUT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10778:SF8">
        <property type="entry name" value="ADENOSINE 3'-PHOSPHO 5'-PHOSPHOSULFATE TRANSPORTER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10778">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35 MEMBER B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08449">
        <property type="entry name" value="UAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18090" checksum="0D10DBE8BBF51F40" modified="2025-10-08" version="1">MDSNAKPFLFYGYDLSKWKKSSILLFLAIAHITCAIMFGLLQERVFRIPGFKFGGYMTIVTSATYVVCGALEMWLSGQFKFSGGLLNYGILALTTFSGMYFTNWSLEFISFPARIIFKSSKVLFLTKSKLQNFNKKANSSYARFFDFGEKVDNKRIFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK7</accession>
    <name>A0ABV2AQK7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ferritin</fullName>
            <ecNumber evidence="5">1.16.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003480</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>4 Fe(2+) + O2 + 4 H(+) = 4 Fe(3+) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11148"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="1.16.3.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the ferritin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.16.3.1" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010001985">
        <property type="protein sequence ID" value="MES1921955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001519">
        <property type="entry name" value="Ferritin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009040">
        <property type="entry name" value="Ferritin-like_diiron"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008331">
        <property type="entry name" value="Ferritin_DPS_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11431:SF127">
        <property type="entry name" value="BACTERIAL NON-HEME FERRITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11431">
        <property type="entry name" value="FERRITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00210">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="Ferritin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50905">
        <property type="entry name" value="FERRITIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="2 5" id="KW-0409">Iron storage</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ferritin-like diiron" evidence="6">
        <location>
            <begin position="3"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18790" checksum="07E7E4E83131BB77" modified="2025-10-08" version="1">MVRILDRELETLLNEQANLELQASYKYLSASFKANELDLNRIEKFLLEQSAEERLHALDFYAFIQKKNGKAVFRPVEIDLPKMESPEDIFKFAYDSEILVSEKINNIIEKANAKDPEVAIFLMDYAKKQTEEIDIALGNLKMAKDFGKEKINCRFLDREFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN8</accession>
    <name>A0ABV2AQN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003512</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002034">
        <property type="protein sequence ID" value="MES1921988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="21831" checksum="3543CB4CC05045F6" modified="2025-10-08" version="1">MSGNSSTNFEIVTCTGKDKTGALNILYNGIKLKREDEILFENGGKVDFINSELIFAGENGGNKRKRILIANMGFKETNLIREKEGRFVADDRWICCSNKTVKTGNFGSGKVVQICENAIYFIVENNDLNKICDIIWKVKSDNEEIEKAEICYPFILLKYKNDGFEILTFKKSGENGFFDAKKLDLVDKRRVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS1</accession>
    <name>A0ABV2AQS1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003539</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002088">
        <property type="protein sequence ID" value="MES1922023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011400">
        <property type="entry name" value="EIF3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14068">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14068:SF0">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="6">
        <location>
            <begin position="77"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="39342" checksum="619BAF70349DD6A7" modified="2025-10-08" version="1">MVDVSNSNSDNKKTPDSDSSINSEAQFKELTATAKDWDYDFFDKETRIEKEPDITSTLLITGLPKIPDEKTAKLKNVIKKKFKSFGKISTEDITIFREENTDLSTGSCIIKFRSSGDAHAALALKKFDKNHSLQSVCVQDCLDTDTRLQKMTKTLSVLKESDALFSHNNDIRQRCQFLVRCGAKTTVCWHDPLRLSLEGRDPFVDYDENKGEAATELILPTEEITITAVRWSKTGKFLGAIGSKGQIVVYGGSPLKKLCEFGQKFCDFEFSPMDNFVVAIKTEDPQARSRQSRAIVVTRVAEVWDFLLVKLTVVVSLKTGLRLKWSFDEKYFAFMTNSGISFLVSQLFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI4</accession>
    <name>A0ABV2ARI4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003801</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002533">
        <property type="protein sequence ID" value="MES1922292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6587" checksum="33BF0910F709ABAE" modified="2025-10-08" version="1" fragment="single">MRRQCIITKSMLENSSRGIPELTQRPVDRSTQQEQRKIKATVNFMHEAENRSNLVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI5</accession>
    <name>A0ABV2ARI5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit trm82</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">TRM82</name>
        <name evidence="7" type="ORF">MHBO_003534</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002081">
        <property type="protein sequence ID" value="MES1922013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028884">
        <property type="entry name" value="Trm82"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16288:SF0">
        <property type="entry name" value="TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT WDR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16288">
        <property type="entry name" value="WD40 REPEAT PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 6" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="183"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="319" mass="36490" checksum="CFF30E9688AF3A31" modified="2025-10-08" version="1">MAVYFSDNGYIVCEADGTAKMLYSILNILRFSFKNENPKKISSFYSKNEKLKSVAQSSNFLIYSTFDKKLFFVDFRKNKIELKVSKNVESIKIINSGIEKAIIFDSVGDVYKICENGQNGVETKFCFGSISPITSISVSPDKKWFAAADKTSRIRISRLDSIQKIESFCFGHQLSPTQLLFCGDLLVSGGRDNFLIVWDYKKGKLLFKIDFDLIKIDYFEKIKFETNIDTDLIKEETFKKLKSDKIGIKTVKNFGNKIAVLCYKNLEQIAILRIELEEIKVQKIIKFGKIANFEFENANFLTVFAERGKAVPEAIKINI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI8</accession>
    <name>A0ABV2ARI8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003763</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002474">
        <property type="protein sequence ID" value="MES1922257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="124"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="71"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="203"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29369" checksum="4B67FEC5B232D3E7" modified="2025-10-08" version="1">MRKFIDDQATKSLRYMSSDEGKKNILNPRGRKPIIKESSSSLDDAVGYRVRRYIDSIVNCPEVIGEFNEIQDEILQYYEKLSSELKTMENELKGSDEKEIEEAVSYRGESHAPFFAGLIATSPIWIPLLATAVVIAIVSLPFIAPVIAFLGRDARKKKIIDEEYAKYKTTCCTLVCDALNRVYGSVLHKLIETLTHNIFDKRIEFLKETIKDLSDNREQIIEQQECLGRLTEKLEHVERMLEKIIQDSYAFMNNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARJ6</accession>
    <name>A0ABV2ARJ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Translation termination factor GTPase eRF3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SUP35_3</name>
        <name evidence="5" type="ORF">MHBO_003815</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002559">
        <property type="protein sequence ID" value="MES1922308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03704">
        <property type="entry name" value="eRF3_C_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054696">
        <property type="entry name" value="GTP-eEF1A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050100">
        <property type="entry name" value="TRAFAC_GTPase_members"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23115">
        <property type="entry name" value="TRANSLATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22594">
        <property type="entry name" value="GTP-eEF1A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Translation elongation factor EFTu-like" evidence="3">
        <location>
            <begin position="70"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="GTP-eEF1A C-terminal" evidence="4">
        <location>
            <begin position="158"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF22594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="27667" checksum="5C88EA48FCEAEEA2" modified="2025-10-08" version="1" fragment="single">FLNFSNLDISNLPMSGLTGDGIINPPSEKICDWSEGKTLLSLLDNQKITRPKNSAVRLPVISRYNEMGTVVALGKIESGVLLAGAKLKLSPSGKEVVCDSIFVSEEKVDAARSGENVNVYLKNCEKEDIFCGDIICGIDDIAPKSNFLECQIYVTDLLKHKPVISVGYSCIFHAHSTTSQCEFLRLGQIDQNKKMKKIQFAKEKSAIFCKLKLSKQIAIEKYSDFAQLGRFTLRDEGKTIAIGRVLKLLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ5</accession>
    <name>A0ABV2ARQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003861</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002646">
        <property type="protein sequence ID" value="MES1922355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9402" checksum="89BBEFC944DF07C0" modified="2025-10-08" version="1">MFRAPHFIKICRQAKCKNGLLKMKHMGKRCKMDDNEFDPSARKVPSNNFERALGFASLAAKVAFNGLAEGVKKGISGEEINFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR2</accession>
    <name>A0ABV2ARR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lariat debranching enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DBR1_2</name>
        <name evidence="2" type="ORF">MHBO_003860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002644">
        <property type="protein sequence ID" value="MES1922354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007708">
        <property type="entry name" value="DBR1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12849:SF0">
        <property type="entry name" value="LARIAT DEBRANCHING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12849">
        <property type="entry name" value="RNA LARIAT DEBRANCHING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05011">
        <property type="entry name" value="DBR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01124">
        <property type="entry name" value="DBR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lariat debranching enzyme C-terminal" evidence="1">
        <location>
            <begin position="30"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="23467" checksum="99E57AD7DBDFE838" modified="2025-10-08" version="1">MFTEKLNFIIFSHSQKDQILKLKVKFSAIFKHENNKTTKFLALGKCLKNIDFVQLLKFPNLNFEKSTLSYDAEWLSIVRKTNKLIPLSDRPLSMEIYEKFIKKEFEITNEEMSKIEMELKNFEIPKNFEKTAPGYNSKEEKNYKIEYRTNPQTTKFCEKLKIEDMFYKKQCQILSKNKETIAKNDKNEIEIDKIFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR7</accession>
    <name>A0ABV2ARR7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Replication factor C (RF-C) subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RFC5</name>
        <name evidence="6" type="ORF">MHBO_003869</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002662">
        <property type="protein sequence ID" value="MES1922363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18140">
        <property type="entry name" value="HLD_clamp_RFC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.272.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050238">
        <property type="entry name" value="DNA_Rep/Repair_Clamp_Loader"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013748">
        <property type="entry name" value="Rep_factorC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047854">
        <property type="entry name" value="RFC_lid"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669">
        <property type="entry name" value="REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669:SF9">
        <property type="entry name" value="REPLICATION FACTOR C SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13177">
        <property type="entry name" value="DNA_pol3_delta2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08542">
        <property type="entry name" value="Rep_fac_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="post-AAA+ oligomerization domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Replication factor C C-terminal" evidence="5">
        <location>
            <begin position="132"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23865" checksum="E58B7336655509FD" modified="2025-10-08" version="1">MGQLFSNGTKFIILDEADAMTNSAQFALRRVIEKFTKNVRFCFICNHINKIIPAIQSRCTKMRFNLLNTQSILKRLKFIAEKEKIKNDEEGLKTIIELSKNDMRNCINILQCCWYGHNEINAENVYKSAGIPQKKSIDKIVEYLLNEEFHFCFKVISNFQVENGVSLDVLVALIFEKVQRIDFPENVLSFVIEKMAQTGYYLIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS7</accession>
    <name>A0ABV2ARS7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BESS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003891</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002701">
        <property type="protein sequence ID" value="MES1922383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004210">
        <property type="entry name" value="BESS_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02944">
        <property type="entry name" value="BESS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51031">
        <property type="entry name" value="BESS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BESS" evidence="2">
        <location>
            <begin position="58"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="22"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="17691" checksum="08EFEB59C6931820" modified="2025-10-08" version="1">MSRPETPEEAALETFVSSRGTSKKDSKREGKRSQDEVDQTICNYFKKASVPAKAAEKPDDVDLFLQPMVGTIRKLPARQRAEVKFKIHEVVHKAEMSCMYPPAITQPPFPQTCSSYPFGPTLDMPRQQNAMYEAVVGKPTHSASLATSSDVDSVHYSQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART7</accession>
    <name>A0ABV2ART7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tripartite motif-containing protein 45</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">TRIM45_1</name>
        <name evidence="1" type="ORF">MHBO_003591</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002179">
        <property type="protein sequence ID" value="MES1922072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.830.40">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16188" checksum="3A735FCD925A5F46" modified="2025-10-08" version="1">MENDKICSTNLCDLCYDVNVSANASLVCKEEQIYLCGRCGRRHQIQNATKSHKVTTIEEDRKKEVLCDLCLGDKERVPAYGYCETCEDPEYMCLSCSKRHTASKMFKSHSMSTDLENRPNNSQSSVKVSFILTNSFNGFKYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS07</accession>
    <name>A0ABV2AS07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Collagen alpha-2(VIII) chain</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">COL8A2</name>
        <name evidence="5" type="ORF">MHBO_003976</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002880">
        <property type="protein sequence ID" value="MES1922461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001073">
        <property type="entry name" value="C1q_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050822">
        <property type="entry name" value="Cerebellin_Synaptic_Org"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22923:SF116">
        <property type="entry name" value="C1Q DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22923">
        <property type="entry name" value="CEREBELLIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00386">
        <property type="entry name" value="C1q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00110">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="TNF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50871">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0176">Collagen</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="domain" description="C1q" evidence="4">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="16183" checksum="ED7D022E8E96B67E" modified="2025-10-08" version="1">MVAFYTYMDYNQKEIGTHHVFVFDRVVLNYGNGYHEYSGVFSAPRSGLYMSVWSLRVWEQSVVLIVAGSTYTSMYNRSYREDYTHDGEYSDADETASSFALVHLNEGDDVYLRTHSSYSGTGGVISNEYGRSSFGGWLLMHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS59</accession>
    <name>A0ABV2AS59_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DZIP3-like HEPN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002984">
        <property type="protein sequence ID" value="MES1922510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041249">
        <property type="entry name" value="HEPN_DZIP3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18738">
        <property type="entry name" value="HEPN_DZIP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DZIP3-like HEPN" evidence="1">
        <location>
            <begin position="9"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="18190" checksum="9EEFEA574ECFC267" modified="2025-10-08" version="1">MSTILASNDLKKKLYKPENKKTINSFKSARNYEECDCDSTLLYSLIRNTCTKKLDPTSGWGLEELPPDTYVEVGDDIERIRLSKNVFSHKKIKELEDQIYKKYYRIARKICQRLKHYSQGGDYEEELQQIHESKIEDVKGVSKKVDKLAGKHTLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE5</accession>
    <name>A0ABV2ASE5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003806</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002541">
        <property type="protein sequence ID" value="MES1922297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="51" mass="5834" checksum="7613A514624DF704" modified="2025-10-08" version="1">MAYTSPVACQWLLVMAAWLLVRFVIGIIENFKIHEDMHYGTSGQHTSHRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM7</accession>
    <name>A0ABV2ASM7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">proton-translocating NAD(P)(+) transhydrogenase</fullName>
            <ecNumber evidence="1">7.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004198</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>NAD(+) + NADPH + H(+)(in) = NADH + NADP(+) + H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003396">
        <property type="protein sequence ID" value="MES1922675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007886">
        <property type="entry name" value="AlaDH/PNT_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160">
        <property type="entry name" value="NAD(P) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160:SF19">
        <property type="entry name" value="PROTON-TRANSLOCATING NAD(P)(+) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05222">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01003">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52283">
        <property type="entry name" value="Formate/glycerate dehydrogenase catalytic domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-1278">Translocase</keyword>
    <feature type="domain" description="Alanine dehydrogenase/pyridine nucleotide transhydrogenase N-terminal" evidence="6">
        <location>
            <begin position="92"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="27661" checksum="50A6BE9B6C914FDC" modified="2025-10-08" version="1" fragment="single">MDLRSLKAHRLIFNSMRKLCHKSRFAKSIFPVNQRRSYFNKIGNSKNRIKFSIAKFDYPILSQNQNFCSTHKKSANERKVIKTVPFDKMTIGIPKESFQDERRVAISPNSVMKLAKKGATVLVATGAGEGSNFTDEAYNKAGATICSQQKALSADVVLKVRAPSNEEISHLKDESTLFSFVFPAKNKQLVQKLEKKKTTLFAMDCIPRITTSQGYDALSSMSNVAGYKAVVEAAQHFGNFFSGQTTAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN4</accession>
    <name>A0ABV2ASN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003398">
        <property type="protein sequence ID" value="MES1922678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10596" checksum="5CA05D6DC12A4B84" modified="2025-10-08" version="1">MTVFYDYAVKLIKSSDDRAVSWRESMEHCEMYFDSYLFGDLPLGSRKKMCKTIGVELSGPTWIGIATQIYISADQGNISCIRLSYKYFDINL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR5</accession>
    <name>A0ABV2ASR5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">glutaminase</fullName>
            <ecNumber evidence="3">3.5.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003999</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>L-glutamine + H2O = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaminase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.2" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010002919">
        <property type="protein sequence ID" value="MES1922481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="entry name" value="DD-peptidase/beta-lactamase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015868">
        <property type="entry name" value="Glutaminase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12544">
        <property type="entry name" value="GLUTAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12544:SF29">
        <property type="entry name" value="GLUTAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04960">
        <property type="entry name" value="Glutaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="beta-lactamase/transpeptidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00049534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="22394" checksum="E1FFBB4970AF74BA" modified="2025-10-08" version="1" fragment="single">MMREYKSFPNKDEDVSKVLDFYFSLCSVELTARDAAVLSASLANGGVCPITNDAVLESINVRNCLSQMLSCGMYDYSGEWAFSVGLPAKSGVSGCVLIVIPNKMGIAVYSPPLDKIGNSVKGLAFAERLSEQFSIHHLDSFHAKGGRLERAVRMETSRRRQHRLNISNLLVSASSGDLDEIKRLVSIGVNPFEPGIDGRTALHLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR6</accession>
    <name>A0ABV2ASR6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004221</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003460">
        <property type="protein sequence ID" value="MES1922697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6673" checksum="46C62370EEF75CA8" modified="2025-10-08" version="1">MGKPDLAAQAEGRNPEPIMGDHRNPNNPWLDFKSSKSKRVRNKSGFGDFERPSKKKRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST8</accession>
    <name>A0ABV2AST8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004266</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003557">
        <property type="protein sequence ID" value="MES1922743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22007" checksum="817346CE0FBB7E11" modified="2025-10-08" version="1" fragment="single">IINETENIYKKCLYYCEDIYNRHRAESHSQIICVLLEITTRFGFLLNKIGRLPDYNNEIAQSIIEDSAKSKFTKIRKLLPKNLFQFKKKDWDILETEVPRFIGVEISCYSVSNESFGGKHVSGKAIYSFLKPLCVELCSFLDNVDRLKSSDGVVEACRLLKATNDYVRASAGPEQFNGNLDFDGNNDFESFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASW3</accession>
    <name>A0ABV2ASW3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003605">
        <property type="protein sequence ID" value="MES1922759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="25299" checksum="36C8028796CCE6A0" modified="2025-10-08" version="1" fragment="single">CVILKRISIYFCMKKENLCIYNYSLVVTIITIFLCVFGGYINFKIMVNIVSENSIFKKLDILLKNNSKKIDKFQDAMDFIIDTDLTNKIEKYLKSINKLGTLLNGINDLTKSLKNSKVVFDLFEKFNYEKFVDDFNSISDETIKLLSKFITGTNISAEHLKLAQTHLNSFFLYSVTSYYETYKIANLFKMILESVLSLIYPLFITFTLLNYGIVLFVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASZ3</accession>
    <name>A0ABV2ASZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003716">
        <property type="protein sequence ID" value="MES1922786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="65"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9217" checksum="A1E7A56F0BAB28CC" modified="2025-10-08" version="1">MGAFRNAIVPCCVPIIESAHYSQIKRFLHEDINVAFGERSGQEIEANANNERGGKKRVKKHKSFHLKDINNDHSDGKREND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT78</accession>
    <name>A0ABV2AT78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004319</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003737">
        <property type="protein sequence ID" value="MES1922794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="18156" checksum="64CEC98BBC195B56" modified="2025-10-08" version="1" fragment="single">KFATQEFAWCFSELFDDYGEVLLQVDPIIDQQSAKNPQNEHRFLKMANLYLKKSVQTESEFIKNLAHALRTQKGLKPFPECYFLFEMELLNEDKFPKNRIAPSLVPMKQPQNCLDDDLITFEIDEFLESAEVYPELEYRNILYLQPLTLSSSKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT97</accession>
    <name>A0ABV2AT97_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003981">
        <property type="protein sequence ID" value="MES1922894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="26353" checksum="B0D67B26F8898C6F" modified="2025-10-08" version="1">MGIVNDSLIELYWSPHKNRDMKCNKHAILSYMQRLGLIAVSQNHSGNHFIPFANTHDYQDHMDSYTNRTPDLVFKFQHLPHFFFPTFIQGCMAQWNVLKDTGKLLIFNKAVFFDYGDHIHKIGVASGKVSIKLQVFSFEHTLDELKTAQIGKIIKETIKTTSAKFHQETHYEVGFSCYAFNSTNDDYSFLNENVIKALPKGRSQCPLHPHGRHSIDRKDFLKYWVKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT98</accession>
    <name>A0ABV2AT98_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004424</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003978">
        <property type="protein sequence ID" value="MES1922893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="11214" checksum="D3C6E3478E722740" modified="2025-10-08" version="1">MKCLTKPKYIREICDQDTHNTRHGTYDDSDISSEEYSYSVKIVDQHHIKPTSKSPMTSIKIKNKTYKFIIDTGLSVNILNENRRIQNMYQTQEEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU12</accession>
    <name>A0ABV2AU12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004959">
        <property type="protein sequence ID" value="MES1923165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18182" checksum="A874EE70CF10A486" modified="2025-10-08" version="1">MSQPNLNFAKTTEKNSQLFEETAKLENIGQISSIFGGHFQNFSSSQKTKLNLSLLQKMLNKQTTTKNGKIKALKLYNEKMMKVNSEKKDLFEDDLEDEKEKIKDVFKDDFAHEEDVDEAEDIVKDETAADLISFDSFPNVLFDYENGLFWPNFNFCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU67</accession>
    <name>A0ABV2AU67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004714</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004976">
        <property type="protein sequence ID" value="MES1923169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18157" checksum="E16F55F5986CCAE8" modified="2025-10-08" version="1" fragment="single">MLDEIKEEYESKINDMKSEFTRTQNYQTVKNSARSILSSMNPIVSSNDVIARNREADFLSKLEKYDYQIGDDGMTLVLNKETGERMEDPHGNPFKFEDIVKEEAALYYDFKAQNNKGSAGNEKGSGGGSGVKVPTNETEFYEMIADAQDAESRAEIRAAWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU72</accession>
    <name>A0ABV2AU72_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">separase</fullName>
            <ecNumber evidence="2">3.4.22.49</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ESP1_2</name>
        <name evidence="6" type="ORF">MHBO_004769</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>All bonds known to be hydrolyzed by this endopeptidase have arginine in P1 and an acidic residue in P4. P6 is often occupied by an acidic residue or by a hydroxy-amino-acid residue, the phosphorylation of which enhances cleavage.</text>
            <dbReference type="EC" id="3.4.22.49"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.22.49" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010005170">
        <property type="protein sequence ID" value="MES1923225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005314">
        <property type="entry name" value="Peptidase_C50"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030397">
        <property type="entry name" value="SEPARIN_core_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12792">
        <property type="entry name" value="EXTRA SPINDLE POLES 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12792:SF0">
        <property type="entry name" value="SEPARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03568">
        <property type="entry name" value="Separin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51700">
        <property type="entry name" value="SEPARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase C50" evidence="5">
        <location>
            <begin position="73"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="21485" checksum="E8BEE2F59877448C" modified="2025-10-08" version="1" fragment="single">KKDEKNLKTLNLLNKFYSENKNDIEVVIYLSKILQPFPIESLPSFQNISITRNLSLETTIPKNKSFGNNILSIKSGGYILNPGNDLPNTENRFRTFFDQLDFWKGLIGKGAKSDFEEILSNKEIFVYVGHSGGEQFLSSKEIEFLKIKSVSLLMGCSSGLMKLQGMFPPRGLVYSYMIAEWFHLFFMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUF4</accession>
    <name>A0ABV2AUF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004850</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005509">
        <property type="protein sequence ID" value="MES1923299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039309">
        <property type="entry name" value="BT1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03092">
        <property type="entry name" value="BT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17544" checksum="7EED8C88373B67EA" modified="2025-10-08" version="1">MMASLALGMAAANLLGSKSFVLFYALASSVVLCVLSLAWQESAKAKCNVYLFIVEATYIQIPGALDYWYTAEPSCVAQGPNFDMTYYLTYTNMVGAVASIIGIALFQAKMSKWPFRRAFLVFNRFSFCNFILFCSKFSFCNFISILFKKFLFAILF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL6</accession>
    <name>A0ABV2AUL6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Choline dehydrogenase 6</fullName>
            <ecNumber evidence="1">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">CHD6</name>
        <name evidence="1" type="ORF">MHBO_004874</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010005607">
        <property type="protein sequence ID" value="MES1923319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11782" checksum="2E20A50674F96A36" modified="2025-10-08" version="1">MFQKAGKKLGLEKALLHSWIKSERDIEKGKSGDLNKEELDKLLRFGAYHVLKDKEEDNKPQSIEDILASSEVMEPADVDQKSETVFGQATFKNTLDGLDKIFDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM6</accession>
    <name>A0ABV2AUM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004940</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005888">
        <property type="protein sequence ID" value="MES1923376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039309">
        <property type="entry name" value="BT1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03092">
        <property type="entry name" value="BT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="77"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="134"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="21856" checksum="8C7D4CC50F5A6C01" modified="2025-10-08" version="1">MFIFGDAIAMDMAEMAAKMPAILLTARLVKKGLESTMYAILAIYHDFGKNVAISIGTTLMMYFRIDFDSRPCHYEMLPWLIVISHTILPMLAFPFAFLLIPDVKMSDTTAFDKYTVSETYGDVSRFDDTDSDIDNVVSGRANGDVGSDNDEGEMDETRGEDVGNSEDVGINGEIRERGEISLSGLSGNGDGSRNDRDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX0</accession>
    <name>A0ABV2AUX0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transketolase-like pyrimidine-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004728</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the alpha-ketoglutarate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005029">
        <property type="protein sequence ID" value="MES1923183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011603">
        <property type="entry name" value="2oxoglutarate_DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23152:SF4">
        <property type="entry name" value="2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23152">
        <property type="entry name" value="2-OXOGLUTARATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Transketolase-like pyrimidine-binding" evidence="5">
        <location>
            <begin position="97"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="164" mass="18773" checksum="0EBF1E1001FD2F8B" modified="2025-10-08" version="1" fragment="single">MNEEEIKNVETAVETSLEDSFRKSKKLDPAEVDWMDHRWTGYHGIEKYSYLRTTGMDIEVLRKIGFESIFVPEGFKVHERLAKFLELRKVALSSGEGIDWGLAEAMALGSLAKENCKIRLSGQDVERGTFSHRHAILLDQKKITPQKFCYPLQNIQNANSSVRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV34</accession>
    <name>A0ABV2AV34_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">UTP15 C terminal</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">utp15</name>
        <name evidence="7" type="ORF">MHBO_005104</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006615">
        <property type="protein sequence ID" value="MES1923520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018983">
        <property type="entry name" value="U3_snoRNA-assocProt_15_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19924:SF26">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19924">
        <property type="entry name" value="UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09384">
        <property type="entry name" value="UTP15_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="3" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="U3 small nucleolar RNA-associated protein 15 C-terminal" evidence="6">
        <location>
            <begin position="32"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF09384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17093" checksum="B8141B8223EE33F1" modified="2025-10-08" version="1" fragment="single">KKLAIGCTNGLVTVLKSKKEKIQKKRKIIVDENVKTTILEKPKFRKLAKYDKDLKFFRYKEAVDNLIIKNNPSAAMASSLFRELIERNALKLALSNRKDENLAKILKFLIKNLFRPQFSVVFLNVAWQILEIYSEQVFLFSESKWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC0</accession>
    <name>A0ABV2AVC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005203</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007132">
        <property type="protein sequence ID" value="MES1923601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="26"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="41"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="16280" checksum="42C8BDA57DBFEFEB" modified="2025-10-08" version="1">MGRKSAAQLAAEEDARLKAEELQAGGESGGESGGESGGESSGESGSEPGGESSKITTSNEPAVKIEKVHAVALRNLPGTVVKLGQVILAPKNLVDEWSSVYWVDTHKNALEFAEKDHERKAKMIELNDPRSEVPPLLLELDHAGQLVIEVLED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE2</accession>
    <name>A0ABV2AVE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005253</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007364">
        <property type="protein sequence ID" value="MES1923637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046947150" evidence="2">
        <location>
            <begin position="24"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13914" checksum="6EB263A1B3B2FAD7" modified="2025-10-08" version="1" fragment="single">MHFIRHMYFGCFFFLSEIIFTDISEIPIQCKNSEETTLCVDIIDCSSVNRQAFHVTCVDRFTKDQFMHIQIYRHFKPHHYKNEFRSYITRQSLEMGRPFKPRPEKPSPRFISFVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVH4</accession>
    <name>A0ABV2AVH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005216</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007192">
        <property type="protein sequence ID" value="MES1923612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9796" checksum="6E48233761A3B2B3" modified="2025-10-08" version="1" fragment="single">VYQSLKECRENHFIFYMEKLEQNGIHYSDLLETKMDMEHVLQPQGDKSHLYNAYCACVEEGFKNFKKSLENSDLNDTKSCPKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE99</accession>
    <name>A0ABV2AE99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid permease/ SLC12A domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000075</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000009">
        <property type="protein sequence ID" value="MES1918049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004841">
        <property type="entry name" value="AA-permease/SLC12A_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004842">
        <property type="entry name" value="SLC12A_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827:SF72">
        <property type="entry name" value="GH08340P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11827">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00324">
        <property type="entry name" value="AA_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="154"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="197"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="227"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="362"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="411"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="436"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="473"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid permease/ SLC12A" evidence="6">
        <location>
            <begin position="80"/>
            <end position="550"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="632" mass="69572" checksum="7E98CE8B88E3EBBA" modified="2025-10-08" version="1">MDENYLNSHNSLMHRVDDPFNQDIKKMKKRKTIFEQSISSSTTFSQKRNSQDDADSVSERNCCGCFFRYCRKTKYGTWDGVFLSCILSIIGVIMFLRLGYIVGQAGIWQTWIVEFVSALVVFLTTLSMSALCSNGEVKHGGAYYLISRSLGPEVGGSIGILFSLGKSIAVAMHTLGIAEPIVDQIGLHITNSKANELRVYGAIILAVLVIIAFIGVGWVIKIQFLMALILVVTIICFIVGCFVTVNPRELIVGVGKGAFKQNFNSEYTKNVDIIAIFGVFFPSMTGIMAGANISGDLANPSKSIPVGTLSAIITSWALYTLMSTFLGSTALRGNLGECAKSTPLTGICQNLIMERIAIPGQIIYAGIYAATISSALASLVGSTRILTKVANDKIVSFLTIFSKKRKSGEPLFAYAPVTIISLGCIMVGSINQIATLVTIAYLITYASINIACFQSSFSKSPGWRPTFKYYNKWVALISGLSCFVLIFVLNYIIAIPASIATFLIFLMIFRNSPNVDWGSANQGFAIMTIVKQLKLLNGKKEHVKNFRPNIIVFSQNPNNDHKLISFLYTLKHSHGANFIGIVQKHLSISEIDEDYFECEAFEKKFVLFRNNFETNDFFFGCTILLKTVGVVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEE2</accession>
    <name>A0ABV2AEE2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidyl-tRNA hydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000093</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00462">
        <property type="entry name" value="PTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1470">
        <property type="entry name" value="Peptidyl-tRNA hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001328">
        <property type="entry name" value="Pept_tRNA_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036416">
        <property type="entry name" value="Pept_tRNA_hydro_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00447">
        <property type="entry name" value="pth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17224">
        <property type="entry name" value="PEPTIDYL-TRNA HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17224:SF1">
        <property type="entry name" value="PEPTIDYL-TRNA HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01195">
        <property type="entry name" value="Pept_tRNA_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53178">
        <property type="entry name" value="Peptidyl-tRNA hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0820">tRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="222" mass="24635" checksum="A68BB9ABD375567C" modified="2025-10-08" version="1">MFHKGLLGTNVLKATRSIFTPWGRVRHDKLWKPKLVVGLGNPGMDGTRHNLGAMWVRHIAKQCEAQLEPLPKLNSAVCRLDNPEKTVLMVPTTYMNLSGEAVKQCITELGISPDDVAVVHDCLEVEVGEVKIRKKGSLNGHHGLLNIARETGHKKLKRLSIGIGRPDSVEEVIDYVLGKPDLEDFAKIEGFAFNFVGNEFIKELYDAPEDKMIGIPVLGHEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEK2</accession>
    <name>A0ABV2AEK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cullin family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000134</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the cullin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1310.10">
        <property type="entry name" value="Cullin Repeats"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016158">
        <property type="entry name" value="Cullin_homology"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036317">
        <property type="entry name" value="Cullin_homology_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001373">
        <property type="entry name" value="Cullin_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00888">
        <property type="entry name" value="Cullin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75632">
        <property type="entry name" value="Cullin homology domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50069">
        <property type="entry name" value="CULLIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cullin family profile" evidence="3">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="16881" checksum="52A48D0B6CB4EF90" modified="2025-10-08" version="1">MKAAIDRNVDKCVGFLIKFVEESIAREDAAQTIGEMVPLFRLLSHKSEFEFAYSASLAFRLMGAPAESPRASEVERRVLGVLKAECGANYVARLNDMLDEFFCKPSQQVFGVKSFLRLKVFGRKIWPACSDAAVDVGSVLPQLAEQIVFSKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEW5</accession>
    <name>A0ABV2AEW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000238</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000031">
        <property type="protein sequence ID" value="MES1918240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="171" mass="20307" checksum="3F3B3BB4A21AFAA4" modified="2025-10-08" version="1">MLTKIISKYFQNGKLYFAAHSLIFCNLGNFQKLEILNFILCDVSVEIKSEHFWDNFLFVLNEIFICCNFDDNEDGRNFSEKLFLITKNLFFFILKNGKIAFLRNIARKLMLQDIIINLLSQKFANFGEKTKEDFLCLILDNFDLFLGENQSNFDYSFAIVFYCLKEYFDVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEX8</accession>
    <name>A0ABV2AEX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000235</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3210.10">
        <property type="entry name" value="Hypothetical protein af1432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039356">
        <property type="entry name" value="YfbR/HDDC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11845">
        <property type="entry name" value="5'-DEOXYNUCLEOTIDASE HDDC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11845:SF13">
        <property type="entry name" value="5'-DEOXYNUCLEOTIDASE HDDC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13023">
        <property type="entry name" value="HD_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109604">
        <property type="entry name" value="HD-domain/PDEase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="3">
        <location>
            <begin position="8"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="149" mass="16641" checksum="16823B78AA0F7FCC" modified="2025-10-08" version="1">MAEFVKLAGKLKRMKRTGWILNKVPNPESVADHSFSVSLMSLLLSKTSPKINSLKLVKMAIVHDLPEALIGDIPPFEISGVSRKIKRDLEDKAISEIGRVLGNEQSCFAQEIKHLCREYNEGSSQEAKLLKDLDKFFSEIKTGHAAYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF30</accession>
    <name>A0ABV2AF30_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Gustatory receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000036">
        <property type="protein sequence ID" value="MES1918283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="140"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="377"/>
            <end position="397"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="399" mass="46462" checksum="551B483BA6270FDD" modified="2025-10-08" version="1">MYIGLITKNLTNYSISLGFFNKFSDIHLGNHLRFYLSLTIQFNKLCSVSDKMIDALLKSNTLDYINATFEIGMKDFFKAMGKTLTSMAGKTSELATNINDLISFIAKNFNPYIEEFTNQVSKISGVFYIFDDMIMYSRNVFTFFLVNLALIQYGVSILFCIYFLLQIKNEWKLRLKFISTIYFVISFCIIYIKYLLYIRIIWSCYFFQDVTNKLDSIKYVMFRNQYFVDENRCFSHWKSFNQTKTSNSFNMIVEICKSCLFKKDSLIFDEMYAEMNINSNGVLSYAEKGYKVLKKMRFLLEEWKMLLIQPEVGENSFASVFLGAIVTDLINISDGIEKDFGNRTSFINVIKEAESCEFANDLYVYLTSNACNLIPNLIFALILLEICLLLCFSVIPLTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF55</accession>
    <name>A0ABV2AF55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">G-patch domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000303</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TFP11/STIP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000041">
        <property type="protein sequence ID" value="MES1918320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000467">
        <property type="entry name" value="G_patch_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022783">
        <property type="entry name" value="GCFC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045211">
        <property type="entry name" value="TFP11/STIP/Ntr1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23329:SF1">
        <property type="entry name" value="TUFTELIN-INTERACTING PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23329">
        <property type="entry name" value="TUFTELIN-INTERACTING PROTEIN 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01585">
        <property type="entry name" value="G-patch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07842">
        <property type="entry name" value="GCFC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00443">
        <property type="entry name" value="G_patch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G-patch" evidence="3">
        <location>
            <begin position="103"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="74"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="74"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="769" mass="90846" checksum="1BAC16A30D3873E6" modified="2025-10-08" version="1">MSSDDSSDLELLQKKKKRRNKDEAIYGVLAADILGGNDFKKNYKNVKFTAGKRLKEEDFEKPEIFARSAKTANSNNFADSNANNATPTKNMPRFDKDFNRFSNHTTGFGMKMLKKFGFKGRLGKHETGRVNPIIPKIRSAKKGNMSRPGLNFGGIDQRPKLEKIDKLSVEEDDFDWNKERLWLKGRMKSKIYSYKEVLELKKDMKKVDRVMFDYTKSQKGERVELKKSFGGFNDSGLVPELRFNLKKTLENIELSILKNEEDKTRINTIIDFLENKLRQSRLNEKNYTEKQKSLIDFEVKIELAQKRYETIRQSSKLDFEAFSNYLSIFEKIESEFRFFYETFGVATVVFNHSFELLTDYFQREWMPFKFRTLTIMQPKKSNEVILRIFETLKNLLHYKKPKLNVLFDRLIERLIGSKLRFFVTKEWNVLDENNKMVDFLTEFKNALPSEFYDQLIANFITPKLVQLVSSWNFEGNKDSLKELVSPWTKIGSKESTEILIEYTANSISLEMDKWLPYNEESFEILLEFSELIPDKVRSIVEEKIMPKIEYSVSSLQIDKLSQEIDVVEFISKWQDLIPVDKIVDIFENDFFPKWISALFHLLKKLKNDRNGAVELIEWYQTWKKALPPVALKRKRFAENMFLALQMMHCFALKMELPDFDQLMLEHSKNVKLIDYKSVETENTRKHQKFAKKVFRGVDSKGFERENFSFKEIVQTFAQEHDMEFYPYPNKLFDGKQIFLFGKKQIYLNNNCAYLKISDSWRPVSLDQLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFA4</accession>
    <name>A0ABV2AFA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Coatomer subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">SEC26_2</name>
        <name evidence="2" type="ORF">MHBO_000078</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000010">
        <property type="protein sequence ID" value="MES1918053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016460">
        <property type="entry name" value="COPB1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10635">
        <property type="entry name" value="COATOMER SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10635:SF0">
        <property type="entry name" value="COATOMER SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Clathrin/coatomer adaptor adaptin-like N-terminal" evidence="1">
        <location>
            <begin position="23"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="234" mass="27372" checksum="5991047DE32DF926" modified="2025-10-08" version="1">MIKAKKCPLLINSENFSENEKLDSIVVFLESNDVDKKRIALKKLIAQVIKDTSKLREVLIPVIKFCFSSPERDIKLLCLYFWEVFWTVSDKEHFKDETLLVCNRLLQDLKHPNEYIRSATLRLLCSFQDPQILEMVKQELIQNLEHGEAVCRRFALMALISTEKTGFCVIEEINDALLEKALTESDDACKRNYFVFLKQKNEEMADSFLSKIWQNLDNESDLIQSEIIRFIKNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFC0</accession>
    <name>A0ABV2AFC0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000091</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="7050" checksum="50AA886DE8180D85" modified="2025-10-08" version="1">MTLFETSALTGESISLMFQTVAEQLYHASGIYSPEKHLSKANSELRVPAVTDKEDSWNCCRVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI7</accession>
    <name>A0ABV2AFI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Mitochondrial ribosomal small subunit component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RSM19</name>
        <name evidence="5" type="ORF">MHBO_000386</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000060">
        <property type="protein sequence ID" value="MES1918418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.860.10">
        <property type="entry name" value="30s Ribosomal Protein S19, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00531">
        <property type="entry name" value="Ribosomal_uS19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002222">
        <property type="entry name" value="Ribosomal_uS19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023575">
        <property type="entry name" value="Ribosomal_uS19_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880">
        <property type="entry name" value="RIBOSOMAL PROTEIN S19P FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880:SF2">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00203">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00975">
        <property type="entry name" value="RIBOSOMALS19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54570">
        <property type="entry name" value="Ribosomal protein S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14942" checksum="98B266B8C16EC5D1" modified="2025-10-08" version="1">MAFLNGFKRLEFTLVKDAANLKQKRHFGKRPQWKLPYLDVEFLVKVRKAKQNKQTWRNFTKKVHLTYDRKMTIVPEFVGLKMAIHNGLMFVHVLITPEMINHKMGEFSHTRKLKYYLEGMETSTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU1</accession>
    <name>A0ABV2AFU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal protein S6 kinase alpha-5</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RPS6KA5</name>
        <name evidence="2" type="ORF">MHBO_000498</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000080">
        <property type="protein sequence ID" value="MES1918543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00180">
        <property type="entry name" value="PKc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24347">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="54"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="324"/>
            <end position="586"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="586" mass="66605" checksum="DD23C908ACBD2B3A" modified="2025-10-08" version="1">MAEEEQSFSENKIVLSWYEPNSNENDLFTFRRKDRSTNCICVKCDECESKIEDYEICSYAGHGGNGAVFRVVDKETREISALKAMRKLDKLMLCIKTEVEVSEKLKGLDCVCNIKHVFESSEYVFVVSEWLACSLEDVNNCNEFSSSQIGNIVVNLVDAMLTVHDKGVILADMKLSNIMLDNEGNLKFIDFGCSTDTDKDVGNRRVGTVGYRAPEMSETGLTKVSDCYSLGVIIVILCGIPQEDIVTKDEHTKKYHSKIEGEKNVISETPFGEDLDLVLLVDNLLEKTPEERIQPKDYSKIHMFHFLDKILKPHCECSEKASSYKLGQVISYETNCLVFEAVKLEEKYAVKGYLKTPENINEVLNEIRICSRLKHPNILKQLHVFEAPQCLYVMTELCEVSLNDMHQGQTVRQLGNMLLLEQDIDEIAASIVIVLMYLAANDVIHTNLCLRNVMFTKSGILKLTGFGRSVDLTGNTRNIKKKVNLEFSAPEVHAGYATVKSPYWNLGIILYELRTPSNTFVEDRDTNLDSNYIKFADGCLEKSTIERKGFILQNKYPKYIKDVIDRIGGVNFLGKLTKEQYFNLYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX2</accession>
    <name>A0ABV2AFX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000089">
        <property type="protein sequence ID" value="MES1918585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23021" checksum="C6A7F3D73DD47D0E" modified="2025-10-08" version="1">MLHRIRELAVSIESATELDSIAVKCDNLEILEIEWAPFAPSRRSLLQVFSSCTRIRSLSLWGFSVEPSQFLVAKRIEELFFYSTNLDDDYLESLSLQLCDKPLRRLKISGQTCTIRGILSVALYLPELEELNISYTKVDGDDVADLLSAKNTRGELQVLRHLKHLSIGWDQVDVVKKRLSSLRKNMVVDCSPWCKQKCCVAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG30</accession>
    <name>A0ABV2AG30_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000382</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000059">
        <property type="protein sequence ID" value="MES1918414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="255" mass="29964" checksum="3B6C40CA14970CE6" modified="2025-10-08" version="1">MAKFIDDLKNIKFFDYDVAALENEVFKNCMYAKQLDGLTSNMEKMVGKKNSARNRAEIEESHFDYRRVLQEVENGFMNVALLWAYHTAAEKIFAAKDKADSIARNARDKEKQFSSTKTFYNLLQKSEKAIRKIDRLYEDAKFLIESIRTGSEEDKADSMKDMAALQWLCDKTLRNLEKTQSAFGEKGHYFLAKYYDIEDNISRLAEQRRIAITSLLLNSRMEYAEQMRWQRQSQIFCPKRRDKHGAVEHRDRVSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG89</accession>
    <name>A0ABV2AG89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Mitotic exit network component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">MOB1</name>
        <name evidence="1" type="ORF">MHBO_000596</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000102">
        <property type="protein sequence ID" value="MES1918662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.30">
        <property type="entry name" value="MOB kinase activator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005301">
        <property type="entry name" value="MOB_kinase_act_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036703">
        <property type="entry name" value="MOB_kinase_act_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22599">
        <property type="entry name" value="MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03637">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01388">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101152">
        <property type="entry name" value="Mob1/phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21534" checksum="27DEFF65053D77BE" modified="2025-10-08" version="1">MSADLNKLAESERLDYYLLGNIEEASSCPKNLNKDEWIAINIAFFYNEISVLYASIAKHCNENNEQCANSKNKTNVYTKKHIRNKLNQISNLFSDHAFFPVDRSVPLREDICDILSQISQGILKIFEHIYIAHHHEFSSLPMLNAFFLHFTEFNFQNNVLGDVDLGLLRPLYHKLLECRGNILLVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGD1</accession>
    <name>A0ABV2AGD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fructose-1,6-bisphosphatase</fullName>
            <ecNumber evidence="3">3.1.3.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">FBP1</name>
        <name evidence="3" type="ORF">MHBO_000639</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Carbohydrate biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.11" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000113">
        <property type="protein sequence ID" value="MES1918718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042132">
        <property type="term" value="F:fructose 1,6-bisphosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044015">
        <property type="entry name" value="FBPase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000146">
        <property type="entry name" value="FBPase_class-1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556">
        <property type="entry name" value="FRUCTOSE-1,6-BISPHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556:SF35">
        <property type="entry name" value="SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18913">
        <property type="entry name" value="FBPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56655">
        <property type="entry name" value="Carbohydrate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fructose-1-6-bisphosphatase class 1 C-terminal" evidence="2">
        <location>
            <begin position="10"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="14645" checksum="8F0F018534C748FB" modified="2025-10-08" version="1" fragment="single">LMNDNLRIPDGECFSVNTSYYQDWDRKTKNFINNCQNKKRMFRYIGSMVADVHRTLLHGGIFMYPPNNKFPNGKMKLTTEANTIAFLIESAGGKATDGEKSISLLQPSNNDDTTPIFAGSPKLIEEFEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG3</accession>
    <name>A0ABV2AGG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000653</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000115">
        <property type="protein sequence ID" value="MES1918737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="221"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="29136" checksum="CCF901B6A7F43CC8" modified="2025-10-08" version="1">MSLITIFLLMRPHLSQYGCDLTSFLIYSIDTFKEPVLSSNCTYALDIGELCVFALNHARNMRLANKIRLFPLQNVVDNNLFVQCNHNGELDPPFGMINYECGTLARKYGSGISEFDPVTDICGFDRKEILTVLDFSMLCLTAPGEVEMGSAGRIYSREERWPVFYNESVFLCPGGMLDSTTGKNYVKIKCVGNEWKPEGNCTFQNEDTIKKQYKPSEHLKVIGLLSISVIILILSGIFYLIGTNYYLSTKDIAHLENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGU5</accession>
    <name>A0ABV2AGU5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Nuclear pore complex protein Nup98-Nup96</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">NUP98</name>
        <name evidence="11" type="ORF">MHBO_000736</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nuclear pore complex</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleoporin GLFG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000136">
        <property type="protein sequence ID" value="MES1918837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1610.10">
        <property type="entry name" value="Peptidase S59, nucleoporin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025574">
        <property type="entry name" value="Nucleoporin_FG_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037665">
        <property type="entry name" value="Nucleoporin_S59-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007230">
        <property type="entry name" value="Nup98_auto-Pept-S59_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036903">
        <property type="entry name" value="Nup98_auto-Pept-S59_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23198:SF6">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23198">
        <property type="entry name" value="NUCLEOPORIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04096">
        <property type="entry name" value="Nucleoporin2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13634">
        <property type="entry name" value="Nucleoporin_FG"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82215">
        <property type="entry name" value="C-terminal autoproteolytic domain of nucleoporin nup98"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51434">
        <property type="entry name" value="NUP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0509">mRNA transport</keyword>
    <keyword evidence="7" id="KW-0906">Nuclear pore complex</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0811">Translocation</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Peptidase S59" evidence="10">
        <location>
            <begin position="442"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="116"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="209"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="259"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="212"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="262"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="309"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="352"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="655" mass="73465" checksum="BED86C53F32234C5" modified="2025-10-08" version="1">MNDFDRNDPRQIERKRVLLKAVTDTLNNVNVENDVGRIFDRILEVDFTQFIVPTALGARFLDWNPSQQTSANMSQHNNAKFALPTSSNNLFGGNNNVTGNNNSSLFGGNNNNSLFGGNNNTANNTNNNSLFGSNNNTDNPNNSSLFGSNNNTVNTNISSLFGGNNSGTSNNNASNLFGGSNNNDNTLSNLFGGNNSASTNNNSSNLFDVGNSVKNSTNNDIGNKVDDPYGFGIKYDKKEILKQSSALSSVIVSNDKNENNIENKSANGNNIFGDSSDKNKNENNIFGDSSDKNKNENNIFGDSFDKNKNGNNIFGDSSNKNGNENNIFGDSSNKNGNENNIFGDSSDKNKNENNIFDGTNENILKNTNKSTPKKDDETNKTKPLKNFFDDLDNEDKDIINKIQNQDNSTNSNTKNTVNENLPQKENIKEKYERNLSFPIFTRKNYWTKPINLENLDSSITLEELQHVENFEIGNEFGTIRWKGAVDCSNVNFDKLVKINKTSVEVYPNDDEKPPKGDELNKPAVITFFDVGRPKNINEVKVQQKFKQFLNKQILENNKEAEFISWDLDSNKTVFEVKHFTKYALNIDDFDESEKDFDESESSDFFFNKSGKNTALCKSKLKRFSFSRSGDLVGFKERRILLQKNFLEKKEEFNVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH17</accession>
    <name>A0ABV2AH17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000864</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000171">
        <property type="protein sequence ID" value="MES1918980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14161" checksum="A17F3699F7972A90" modified="2025-10-08" version="1">MEFLFSIALVKVSLSAYNECLGGSISVSGNNLRCTYTILPGAELASTKNLLETKGVLSFKFGRSPDPLAIHKRCLDYVANKSAVIIELVSLDGSETVCHLKTFQEYPERSSLGEGYVGYERKFFRLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH21</accession>
    <name>A0ABV2AH21_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Vacuolar protein sorting-associated protein 28 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000873</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the VPS28 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000174">
        <property type="protein sequence ID" value="MES1918993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037202">
        <property type="entry name" value="ESCRT_assembly_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007143">
        <property type="entry name" value="Vps28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017899">
        <property type="entry name" value="VPS28_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037206">
        <property type="entry name" value="VPS28_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017898">
        <property type="entry name" value="VPS28_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038358">
        <property type="entry name" value="VPS28_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12937">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12937:SF0">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03997">
        <property type="entry name" value="VPS28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140111">
        <property type="entry name" value="Endosomal sorting complex assembly domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140427">
        <property type="entry name" value="VPS28 C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51310">
        <property type="entry name" value="VPS28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51313">
        <property type="entry name" value="VPS28_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0967">Endosome</keyword>
    <keyword evidence="4 5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="VPS28 N-terminal" evidence="7">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="VPS28 C-terminal" evidence="6">
        <location>
            <begin position="114"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="211" mass="24112" checksum="EA4536DEE688A9A7" modified="2025-10-08" version="1">MSMFEINFCNDLRDIGVLENENQFEQKARLFSIIASIEELERLWVGDSISDKDYTNDCSVLIQKFKILYPSLEATVPTVATFMRRYGTNADMAVNRCREGAPATGSISNSVKKKGTLIIFETVHNFITVMDAIKLDMRAVDEIYPSINLLKESLEKEKGILPKKEMGKILDWVDKIKSMKATETISEEDSRQLLFDLENAYNLLHKSLKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH84</accession>
    <name>A0ABV2AH84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000181">
        <property type="protein sequence ID" value="MES1919022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17388" checksum="EEDAD88184EC9BDB" modified="2025-10-08" version="1">MDNIESKKRDFTNNGSFFDFSSLLSDDNLGKDNMNILDKCLDRDFPCDMYKDFCQNSKMFFDGTEDIDLNLDHIINNNEKDNCDNILYMNTIGDEMAQKGKKSRKEQKVYVYNLNERIQKIIKWKRKKIDFILGPKREVSVFADKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI64</accession>
    <name>A0ABV2AI64_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">60S ribosomal protein L21</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000824</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL21 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000160">
        <property type="protein sequence ID" value="MES1918937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.3260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.70">
        <property type="entry name" value="Ribosomal protein L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001147">
        <property type="entry name" value="Ribosomal_eL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018259">
        <property type="entry name" value="Ribosomal_eL21_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036948">
        <property type="entry name" value="Ribosomal_eL21_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20981">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01157">
        <property type="entry name" value="Ribosomal_L21e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01171">
        <property type="entry name" value="RIBOSOMAL_L21E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="104"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="104"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="143" mass="16786" checksum="860F32E952AF046C" modified="2025-10-08" version="1" fragment="single">MPHSFGYRARTRKLFKKDHKQKGKRSVTVYQQVYRLGDYVDVVCDSSQQKGMPYKFYHGKTGKVWNVSKRAIGVLIKKVIGNREILKKIHVRIEHVRPSRCREDFLKRKRTKSESQKGQTDKIETKRKPLGPRKGYVVSVDPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI76</accession>
    <name>A0ABV2AI76_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000271">
        <property type="protein sequence ID" value="MES1919375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="461"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="801"/>
            <end position="823"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1102"/>
            <end position="1168"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="3"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="175"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="232"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="643"/>
            <end position="687"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="719"/>
            <end position="756"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="464"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1102"/>
            <end position="1115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1127"/>
            <end position="1151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1168" mass="135010" checksum="17FB77967389070B" modified="2025-10-08" version="1">MAEREFAELKKDLEREREAKNEAREDLAAAKEKAFGLENLVRSANEQQRAAVAEAEQVKASCSALKNVEQRLREKLENLTEMANINETKIARLEETNKLLSETEKVKLEKALEINEELKTEWHELRQARELDLKTGREALQNNNDLTKKVLADLRFEKEARKEDKTKTERVLADLAKSKIDLTKAKQQISELENFKKNFEAADLNVVGSLAGSGIDEKTARKIKFECSVKKIVEYEHENADLRLQRDNFEEMYKTSDKILKEQTDSIDKLKKEKNAQIFQLEENCNKSEEKLAKALRSLQQSIIEAAKLKQENENLLIQIKTIETALERVRKSKIEIEQNINKKIVRLENDLVLAKKEKMAVIKDYENEVERHGKTVEKMRNSSSEKESLKIQITNLEIQNSELLKQNNSNKNASNAKFDEKVEENKYLKEALKENKKKADLILDELDRTNSLNRYLRSKDKNVVNSENSNAESSRDESKSLENYKKLLADARKEQSFLELRSGKSEKQLENLKRERDINKTLTESLKNELEKAISEKTRLKAFENNSEISEDLNLQISVLKDNNKSLREEIRLQSLQKRELDKRINKLEEAEIPNTKKIASLKEENSLLSMRLESREKMIKDWEKRCMRILEKSNAIDPEDHKRLQSELENNKKALLAAKRESAEIENQSKLLQKEIESLKKAENALKYNLTEARRSLENSKKDEDLKKECDRLREGHSALLRERLTLQRDLVKLKEEQKENEKVVTEMREKTDRVVFELEKFKMLAQKTDFLLDEEKETSNIHKRNAETAAKRLRSFKAIKQRENESTSNPSPNDAKKTLIRKPIPKTTLANLPINDSQKTVGNFAKTAEKRKFDRSNEDQFFGKKDIKIAEPNFNNLENKQNFLFSENKDFGKKDLGTGNMEERKADLAALSTTNNEKKESANIVIADQVENDEINLAPTINKMANEEKLTTTKNENFYEKDVKNIAKIDENDVENIFKFDTKPNNAFKTETKEMTEKAINPFTDNQKNPTELSFGGYEDFYKKTKNDRKTEDNSEKEIKFEAVPDIFDFSRGPFLGGSDKEKKGDATISPPALTEIEKQKLEKSKNDIVEIEPLKVVETTSDLKSSQSENSEIAFLERTNSGQEKRSEKIEIISEPEKIEADKKEGEGSMEVLEISDVENSSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ5</accession>
    <name>A0ABV2AIJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001323</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000310">
        <property type="protein sequence ID" value="MES1919503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="11401" checksum="FAECFCD8EE007954" modified="2025-10-08" version="1">MKMVENNKTIKNNNKKLKQKNKKSQIEKFVQKIEETTNEQLFHKINIQMLKGRKRKNWIKKRMVELGVKRKKIKIPYKNLKKIAKNRKRKIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ7</accession>
    <name>A0ABV2AIJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000305">
        <property type="protein sequence ID" value="MES1919485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22061" checksum="D245974E1E42B5EF" modified="2025-10-08" version="1">MFTSKILDHSNKNGNIKKVDKNKNSDPSKIDKFRQNLDKFIENKITLKKFYNTSILLIQKQIAEKQNIKTAILEITNCLHIFLSFFNQISLKTDIKSNHFVVTNVTLYIICKIADLLLIINWEIVPDSTVTKNILYSKITDTYFCYNTFLLKDCKNVKKCRFLYSLQILKNLKSLLTVLWSPWRIKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIL4</accession>
    <name>A0ABV2AIL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001336</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000314">
        <property type="protein sequence ID" value="MES1919520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="437" mass="51639" checksum="512C9C6132E7ABDA" modified="2025-10-08" version="1">MNVNQSCTDLKIPQFVLFYGDEKRMSLLTYKKNKTPNRFSIISVIKMGVKNLLKKNMEKSKQSSNNTFTKQGNNESQRLKPLKKKVYQNIYTDLVLNCKEISEVHRLLTENYEYCGENIPLNFKHTFVNAIYLIFIRKYLIDFSDYNPENYYLTVSKYLEGDEDSKKIIENNVERCIKELHSAETKPTEIVKPQTISEENKSITEIDEYLASIIKLFDSIDFDENKSTEIVKPQTISEENKSITEIDEYLASIIKLFDSIDFDETKSTLDVERMSKVENYLQSVNEFMEFEKYLVQTKHNKLIVDQFERVIFDILKINEEKTGSFEISLLIDEFDNWQYKTNILNLIIPNIPENSKIRLFLMQNVQFCDDGESIFDKLKLFAIEYSNLLCRFLNEDESKSFKDSEENYSENDNLIKKLIGRFNENCKDNDVIKYEWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR3</accession>
    <name>A0ABV2AIR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001371</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000327">
        <property type="protein sequence ID" value="MES1919562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11827" checksum="4189800A5965560C" modified="2025-10-08" version="1" fragment="single">MRRGFDSQIRLLASKTKKVEKELESLHSAPRKTTQQKKKLKTLEKRKDGLSKHKISTSSLEKLLIPKSPLLGKTVIDVEDLHFSFEDKAVFRGASFSLTKDAVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ4</accession>
    <name>A0ABV2AIZ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">histone deacetylase</fullName>
            <ecNumber evidence="2">3.5.1.98</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">HDAC1</name>
        <name evidence="6" type="ORF">MHBO_001431</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone deacetylase family. HD type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.98" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000348">
        <property type="protein sequence ID" value="MES1919635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0141221">
        <property type="term" value="F:histone deacetylase activity, hydrolytic mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd09991">
        <property type="entry name" value="HDAC_classI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="entry name" value="Histone deacetylase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003084">
        <property type="entry name" value="HDAC_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="HDACs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625:SF10">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037913">
        <property type="entry name" value="His_deacetylse_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01271">
        <property type="entry name" value="HISDACETLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="Arginase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Histone deacetylase" evidence="5">
        <location>
            <begin position="5"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="346" mass="38406" checksum="13E4263F34C3E781" modified="2025-10-08" version="1" fragment="single">KNKTEESDCPIFDGFFRFNQRSAGASVGAAQHLIAENADVAINWGGGFHHAKKMEASGFCYVNDIVLAILQLLQKHQRVLYVDIDVHHGDGVEEAFYASDRVLTLSFHKGGNFFPGTGKLEDIGTGMGKNFSLNCPLHEGMDDDTFFAFFKPIFDRSMAVFRPGAVVLQCGADSLTQDRLGCFNLTPKGHGRCVSHVVSQALPTLVVGGGGYTVKNVARCWTYETSVCAGIQINNDIPYNNYYEKFAPDFRLHIEEDNSENFNTESYLKDTQKAVFEVLRKIEIAPSVPIGTSINMNQNGSELNFLDKNGGKLLLRKQNENEFYGKKPFNNLLSRNLYDGNDVSVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB4</accession>
    <name>A0ABV2AJB4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001390</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000332">
        <property type="protein sequence ID" value="MES1919584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15489">
        <property type="entry name" value="PHD_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="6">
        <location>
            <begin position="167"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="52"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="52"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="84"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="101"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="119"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="129"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="151"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="30299" checksum="04AA3CFADA176B5B" modified="2025-10-08" version="1">MTDDDSNDSIEFLGESTVTEFKTEIAKVPISLSPGSSKNKFVLTELIVLTDDEDAPLDENNSDDENNVNYVDLNFNDKNEPKNQKVNQKNQKTAKTNKKVQKNDKNEQKSSENDENSSDYESYSTYSNEDSEDESAEQIYDEYRNDNQSEIGDDSNEASSSEEDYDEEICSLCKKVGENLLSCKTCPVMYHKKCSKFKQKKKGVVWICPECEKKKTDEIEKTKSRKSVQAAKFPKLAKIDVIDGFQILSFPSPSKTASNLPRNHEKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE2</accession>
    <name>A0ABV2AJE2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UBX domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001204</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000265">
        <property type="protein sequence ID" value="MES1919357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01767">
        <property type="entry name" value="UBX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049483">
        <property type="entry name" value="FAF1_2-like_UAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006577">
        <property type="entry name" value="UAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001012">
        <property type="entry name" value="UBX_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050730">
        <property type="entry name" value="UBX_domain-protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23322:SF1">
        <property type="entry name" value="FAS-ASSOCIATED FACTOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23322">
        <property type="entry name" value="FAS-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21021">
        <property type="entry name" value="FAF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00789">
        <property type="entry name" value="UBX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00594">
        <property type="entry name" value="UAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00166">
        <property type="entry name" value="UBX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50033">
        <property type="entry name" value="UBX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBX" evidence="3">
        <location>
            <begin position="317"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="240"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="398" mass="47073" checksum="B8166A978ECC2457" modified="2025-10-08" version="1">MEANLTSEKSEKLKTFKEYVLCEDTALCVRFLEEENWNVDEAVIKFLERPKTAQRSLLSRTATFASNLTTNIFSFFKSFFVADKKKEFEVTMNKFTKKYGPLHPEFSSDEFEKNVKRCASEKKLLFVYIHDSRPESKYSRGERYSVHDIDDFCRNALTSKPVVEFLNRNYISWMADVTSREAKNLGAQIRISKLPFLLIAAPSKNSAWVRVFQHEGRISEMTLLTCLLDSHSNFEDFTRREALRSEDRRKEQNLRKKQDEDYEKAINCDRDLHRDERDRAEKEKQERMERLKIEEEKRRKVEKLKKYFEDNEEPLLTEENVISIVFSLPDGKTISRRFNATDTIEKLYLFVESKDLDFGPNFVLLTIFPRTLFKDKNVALKEAGFIERSRLVVEPFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF8</accession>
    <name>A0ABV2AJF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Golgi to ER traffic-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">GET3</name>
        <name evidence="3" type="ORF">MHBO_001541</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arsA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000393">
        <property type="protein sequence ID" value="MES1919767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02035">
        <property type="entry name" value="ArsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025723">
        <property type="entry name" value="ArsA/GET3_ATPase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016300">
        <property type="entry name" value="ATPase_ArsA/GET3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00345">
        <property type="entry name" value="GET3_arsA_TRC40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10803">
        <property type="entry name" value="ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10803:SF3">
        <property type="entry name" value="ATPASE GET3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02374">
        <property type="entry name" value="ArsA_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ArsA/GET3 Anion-transporting ATPase-like" evidence="2">
        <location>
            <begin position="25"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="324" mass="36061" checksum="9D87538E63CD7523" modified="2025-10-08" version="1">MSDLSDEELVYEPNLKHLLSKEKLNWIFVGGKGGVGKTTTACAIATLLCKQGKKVLLISTDPAHNISDALCQKISGEETKVNGIDNFYAMEIDPNRGISEKISGGNVSVFSDLVSSIPGIDEAMGFSELMKQVRHMKYDVIVFDTAPTGHTLKFLRFPSILEKGISKMIELKSKFSGLLSQISSIFSENENLKETTGILAQLEETKAVVEAVNDQFQNPELTTFVSVCIPEFLSVFETSRLIAALNDYKISCENLIVNQVLFPEENSNCSKCKARIKMQRKYLEEIDTLFDDCSIVTTPLMDEEVRGLPKIEEFSNFLVEAFQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ3</accession>
    <name>A0ABV2AJJ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001598</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000417">
        <property type="protein sequence ID" value="MES1919841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12271">
        <property type="entry name" value="POLY A POLYMERASE CID PAP -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12271:SF40">
        <property type="entry name" value="POLY(A) RNA POLYMERASE GLD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81631">
        <property type="entry name" value="PAP/OAS1 substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20943" checksum="A04667B86B7CE679" modified="2025-10-08" version="1">MINSFGWTLLCVQFLQQIVPPILPNLQMYHITDTTKFLRASLFENFGDGNKLSIGELFYLFLKHFNCANFDIEKQAVSVFNGCFIPRGDYNIPNNVYSKNVLVTVDPIMTSENVSHHTIKETWYYISKEMERASEMLVNGRNIQKVLKKKMFNENYIKNNFEFEKVHRDFEFCWEIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN0</accession>
    <name>A0ABV2AJN0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001642</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000435">
        <property type="protein sequence ID" value="MES1919891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="17279" checksum="87C8E9DFA22F8370" modified="2025-10-08" version="1">MSQIIAKIKNFKVKPRIKMDSINKEAKIIAEEISNFKTKINRLEKDEIIDEIQNLNNTFQNKIDLFPHFKKYWLFLYCIIIYDVSIKDDINDDMDTKDIKIKLIELQNDKENLSIFKSNLRLYLTSLEKFLLRKDDKKHLLYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJX0</accession>
    <name>A0ABV2AJX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001717</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000468">
        <property type="protein sequence ID" value="MES1919983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="12129" checksum="E94E0BCF2CC851EC" modified="2025-10-08" version="1">MSTEFSVKNKNLYEILTNTPAPNQTFQKFLSEIILQKRKTSWDVMDFNVSFFGKYFEFLNLYSNSVIVNTAFEFLSQVEYLFCLFGGFIKYLRNKNRIRSSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKN5</accession>
    <name>A0ABV2AKN5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">VWFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001930</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000566">
        <property type="protein sequence ID" value="MES1920239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00033">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.70.10">
        <property type="entry name" value="Complement Module, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050525">
        <property type="entry name" value="ECM_Assembly_Org"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035976">
        <property type="entry name" value="Sushi/SCR/CCP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000436">
        <property type="entry name" value="Sushi_SCR_CCP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24020">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00084">
        <property type="entry name" value="Sushi"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00032">
        <property type="entry name" value="CCP"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57535">
        <property type="entry name" value="Complement control module/SCR domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50923">
        <property type="entry name" value="SUSHI"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="2">
        <location>
            <begin position="16"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="3">
        <location>
            <begin position="199"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="Sushi" evidence="3">
        <location>
            <begin position="322"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="395" mass="43773" checksum="9ED0D5C03BDFEFB1" modified="2025-10-08" version="1">MQIVIFFKPVSNCAFNIAYCIDGSGSITQRNPDGFLDEKNFVIEYNNEITKYSGEPFLKSTAVGFANNYAYYFEYNDYSSTEEVDNAISKIKQPSDTGGTKIGGCMHEIYKKARPNDLAIVLLVVTDGMPNHDTYNISEMSEKMRSDNYFIQAAGFNNANLETLTEITGNPDMVIYSNKIEDLDKQLEKLTTEICEELYVCKEPPSVPRATQESLDKCYNKTVGNICPVECETDYKLNDTSAVICQKSGDWLPAVECVGAYDCPKGPQVENAEQNSIDACNKKNEGYTCEITCLSNFLLNGDYPVCQSSGKWDPMCECVSDQICPNPPNVENALDTTKCADSQVGAECEVECKDGYHLNNTYPVCQEGGGWKPTVSCLTNAGYDCQNSLNQLESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKQ0</accession>
    <name>A0ABV2AKQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Rab-GAP TBC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001945</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000572">
        <property type="protein sequence ID" value="MES1920254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.80">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000195">
        <property type="entry name" value="Rab-GAP-TBC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035969">
        <property type="entry name" value="Rab-GAP_TBC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045913">
        <property type="entry name" value="TBC20/Gyp8-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20913:SF7">
        <property type="entry name" value="RE60063P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20913">
        <property type="entry name" value="TBC1 DOMAIN FAMILY MEMBER 20/GTPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00566">
        <property type="entry name" value="RabGAP-TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47923">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50086">
        <property type="entry name" value="TBC_RABGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="180"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="Rab-GAP TBC" evidence="3">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="24059" checksum="ABEA514254CADE53" modified="2025-10-08" version="1" fragment="single">SYEMTLRIIDNYYRDFLTGNIQDSLPLAKFAMKIVEKADKELYKHLDENCIDETMILPWIMTWFSQNKSSLTVIWRVFDFIIKNNLVMPYYIAAQKILTNRSNLMTAEWIHTAMKMISSAPETKRILTESKKLFKKIPPSKVLELMKNDGIVIDTKSRLATNIEKVKLAEPKKGCCKNKYILIVFLFGISMLVLLLMLVDEIFNIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKZ6</accession>
    <name>A0ABV2AKZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002024</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000620">
        <property type="protein sequence ID" value="MES1920344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="403" mass="45705" checksum="8C22CF969119512A" modified="2025-10-08" version="1">MDNEFIKASNKNSEDLKAKILALQEVGDIPAIFLHLNDFFFNNGSLAALGDLKFASEIKETPDEQPKYQQPVVIPESVFDVKDMMDTLIRELNDLIPKYKHLFELRKEFCRNAKEAAGTTNIGDTTNKLMQSFKELTEKLNRPPNFTIPLLSETSIEASFINHFFVMLNEQTVTYVPKILFLADKVTAKYQKMTFDLTVDMFAHLFKADKPGDPVSKDGIAFLRSVQAVHLRSIHDGEIFEMIGSKMHGTAISSQINEETQEMLEEALQEEKTEFSDLSKHPYPQHPYREKFANLGKIKDIVETVKVYSLRTRSNLESLKKCLLEIHTSVAPSDCSLLSNELSSICPNALQKSFVALFKKFAKAIEKGCLVIDVKFGTKDSLVEELKIYCEELLVPADKVVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL21</accession>
    <name>A0ABV2AL21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Transmembrane emp24 domain-containing protein 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">TMED10_2</name>
        <name evidence="11" type="ORF">MHBO_002048</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Membrane</location>
            <topology evidence="1 7">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the EMP24/GP25L family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000635">
        <property type="protein sequence ID" value="MES1920371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015720">
        <property type="entry name" value="Emp24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009038">
        <property type="entry name" value="GOLD_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22811">
        <property type="entry name" value="TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01105">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01190">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50866">
        <property type="entry name" value="GOLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="3 7 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045689819" evidence="9">
        <location>
            <begin position="23"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="183"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="GOLD" evidence="10">
        <location>
            <begin position="35"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="24821" checksum="D369F779E66A2731" modified="2025-10-08" version="1">MSKKVINGAIWAFFLFLKLSTAFHFYVNDHRRKENFCLKEDLQENAIYNAKIKVSSQMEDDSGHSNILIYVLDENGNKIKSRYLKKEDRFVFMSRADGVYNLCFQTGNNGPQIKTKISIESGIDDKYNSIDFAKFEKMGAIEIEMKKMIDLMVEIKQELIIQNIRESQMTKMTDETSELIKNISMLETFLFVVFSVAQMYVLKHFFKLKKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALC3</accession>
    <name>A0ABV2ALC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000680">
        <property type="protein sequence ID" value="MES1920455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="82"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="20023" checksum="E72E32CC82E3154D" modified="2025-10-08" version="1">MERILNDLKLDESYIEALEDNYIYSPEEMKKMGENDVIEIFGQKDAAVFIKWQKNSSRTTKNTKSKIQQKTKDSSKSLSKKLSSEKFSPKKPDLEKPPSKSKEDVSEKHLNHTGEHKRRLHRKKKRNSKIPKELLQASPNTAKSIESKQIFQKSLKYNFSPKRTQKSAKMPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD9</accession>
    <name>A0ABV2ALD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002157</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000702">
        <property type="protein sequence ID" value="MES1920493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="29080" checksum="3D0C125AA5B78EE5" modified="2025-10-08" version="1" fragment="single">MAQINLDNYIELTDDKLKECIEISPVLIRRIVLDKIDKIESSKKHKNDVVFNTIELLAKRLDLIKDGKTIKKVSSKKKKKKNFLIQPISVTKENLMKFKEMAINFHLDKKPELLDPKSLQILSKTILNNSNPKITEKFEQILFQNIHKNPESAINHLYSVFTLKDEKEYEKSLAKAVHFLTQNTEKRDEDVIKYFCLLLPKPSTFFFEAIYNQISAGMENAQHFLDAFLDYALLRPLQRQKALNVLLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF8</accession>
    <name>A0ABV2ALF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Rpa1ap</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPA1A</name>
        <name evidence="4" type="ORF">MHBO_002169</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000709">
        <property type="protein sequence ID" value="MES1920503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04474">
        <property type="entry name" value="RPA1_DBD_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007199">
        <property type="entry name" value="Rep_factor-A_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003871">
        <property type="entry name" value="RFA1B/D_OB_1st"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47165">
        <property type="entry name" value="OS03G0429900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47165:SF4">
        <property type="entry name" value="OS03G0429900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02721">
        <property type="entry name" value="DUF223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04057">
        <property type="entry name" value="Rep-A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Replication factor-A protein 1 N-terminal" evidence="3">
        <location>
            <begin position="4"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="Replication protein A 70 kDa DNA-binding subunit B/D first OB fold" evidence="2">
        <location>
            <begin position="160"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="119"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="129"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="308" mass="34109" checksum="8CB32BD554630929" modified="2025-10-08" version="1" fragment="single">MDNLSKNAIIDISNGKTTTKPLLQIIHIQNMTKRGSASAERYIIILSDGRHHMEGVCTNNLGLAIKTGRIKNFAIVRLDEFRVNTAKNGKKVIVALKGELVNGAIGSEIGSSVSYADYSPDAETRKHRPTEAPKTEPKKFKPLNGDPNVLSDLEQSIVPLESLNPYRGKWAVRVRCTAVSPVRMWQKSTGSGKVMSVDLLDESGTEIRATMFNEAVDRFGDVFAEDKVYVIARGRVKLANKKFTHIRNDYEITLDAESVVQVVVDDRRIGKENYNFSALRDLESADENSFVDVLAVVSRIDPVASIMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK6</accession>
    <name>A0ABV2ALK6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Crooked neck-like protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">CRNKL1_2</name>
        <name evidence="10" type="ORF">MHBO_002224</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the crooked-neck family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000740">
        <property type="protein sequence ID" value="MES1920565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055433">
        <property type="entry name" value="HAT_Syf1-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045075">
        <property type="entry name" value="Syf1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246:SF3">
        <property type="entry name" value="CROOKED NECK-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23233">
        <property type="entry name" value="HAT_Syf1_CNRKL1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Pre-mRNA-splicing factor Syf1-like N-terminal HAT-repeats" evidence="9">
        <location>
            <begin position="76"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF23233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="19777" checksum="AEF3F9B498273DA7" modified="2025-10-08" version="1" fragment="single">MNQFKDNVETDPKTSYHKSGRNLKKEKVLNKAPSDRQITAEQIIREAYEHRVDEFKPQSHRISNEEELKAYQLSNRVEFEQKLRRQPHSINCWLRYAKWEESQKEWERVRSIYERALNVDYQNRGIWLKYAEFEMKNRFPNHARNVWDRAVKLLPRTDQLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU9</accession>
    <name>A0ABV2ALU9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Trafficking protein particle complex subunit 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">TRAPPC2</name>
        <name evidence="1" type="ORF">MHBO_002083</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000655">
        <property type="protein sequence ID" value="MES1920414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006722">
        <property type="entry name" value="Sedlin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12403">
        <property type="entry name" value="TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04628">
        <property type="entry name" value="Sedlin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="15183" checksum="72C109352655883C" modified="2025-10-08" version="1">MYLCVVSKDDLLLFEHDFKDPSFKVEGITQFLLHSTLDLVDLKSTSTDEMDLKEIDTFDKNAISCFVTASNHRFMLMYNKNRLTERKISAFFDQIYAAFVKMQMDPFYNYDDQINSTEFLESVKKSGSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV7</accession>
    <name>A0ABV2ALV7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">5'-nucleotidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_002149</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'(3')-deoxyribonucleotidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000694">
        <property type="protein sequence ID" value="MES1920484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008380">
        <property type="entry name" value="HAD-SF_hydro_IG_5-nucl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02244">
        <property type="entry name" value="HAD-IG-Ncltidse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103">
        <property type="entry name" value="5'-NUCLEOTIDASE DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103:SF12">
        <property type="entry name" value="FI20020P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05761">
        <property type="entry name" value="5_nucleotid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="378" mass="44422" checksum="B4C37A2D25CCDDCF" modified="2025-10-08" version="1">MKQILTFNFRNQLHFRINLFLAFFQFTKLSFKRLNITLRLMAYNKKLKKSDIEKIKLFYEELEMKMQRGQDLGDYADTKLGQIYANSDVHLNDIQVFGFDYDYTIANYTKETNVMTYMEGRNYLVDKMSYPKEIRDFAFNPKFSIVGLHYDIKTGYLLKLTQFSKIQYGTVYYGKQQVSQSKVEEVYPGRRISDIYAAENLKMMSDLFALPVANLISDIIEFFSEQNIEFNSNYLYIDIQNAFDAVHLDKTIHKNISANPEKYIGSSEKFISFVNAIMKSGKKMFMLTNNTHFYVNLGCEKIFAPIVDDPDSGIKHWSEIFDVIIMHSKKPDWYDAKNAFRIYDPVTASLCINTVNTFERGKVSNLILDLLRRKFRRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALV9</accession>
    <name>A0ABV2ALV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002307</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000789">
        <property type="protein sequence ID" value="MES1920656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="80"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="185"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="25194" checksum="3B95869B1780C4E6" modified="2025-10-08" version="1">MGKLKKHIVNELTGGYYDKKELKKQQKKQMKMQKKMMKQQMHNQQYPPGYNPAYTQGYIPPPHQDYNQQHGAFPPTQGYPVANNQPFPQPNAQPHMKNKKQKYPSGYPQNNPLNTQKYGPSQPIQPFNPNVQQNRQPPLGVNQMYRPPYNPQAMAQNYSNEAAYQFAPAGQQQMGQQQMGRRQFANPNYPQSNSNVNVQMRQAPPGPNQFHPMNSNNAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM02</accession>
    <name>A0ABV2AM02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002311</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000792">
        <property type="protein sequence ID" value="MES1920660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="entry name" value="Enolpyruvate transferase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8218" checksum="1733444959535F1F" modified="2025-10-08" version="1">MGIKVYRDEENLVLEKRGNQEILKSLEKIDMSNCTDSFMAMSMVAAVTNGTTEIFNIQVIYWDDYFCNNLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM66</accession>
    <name>A0ABV2AM66_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Actin-related protein 2/3 complex subunit 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ARPC4</name>
        <name evidence="7" type="ORF">MHBO_002148</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
            <location evidence="1 6">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ARPC4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000693">
        <property type="protein sequence ID" value="MES1920483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004733">
        <property type="term" value="F:pyridoxamine phosphate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1460.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034666">
        <property type="entry name" value="ARPC2/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008384">
        <property type="entry name" value="ARPC4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22629:SF0">
        <property type="entry name" value="ACTIN-RELATED PROTEIN 2_3 COMPLEX SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22629">
        <property type="entry name" value="ARP2/3 COMPLEX 20 KD SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05856">
        <property type="entry name" value="ARPC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039100">
        <property type="entry name" value="ARPC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69645">
        <property type="entry name" value="Arp2/3 complex subunits"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR039100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19717" checksum="AF3FA18F0FF2BF98" modified="2025-10-08" version="1">MANTLAPYLKKVRAALNEGMCLRNFPSQKIERHNKPEVEARMNKELLLDPIEVSRTAREKVLIEPSVNSVRISIALKKADELEEVLADRFMRFLMQRAEEFEVLRRKPVGEYDLSFLVTNFHTEEMIKHKVVDFIIEFMEMVDKEISGMKLSVNSRSRVVTQEFLRQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG2</accession>
    <name>A0ABV2AMG2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002163</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000705">
        <property type="protein sequence ID" value="MES1920497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="199"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="26924" checksum="8F0236E593CC3E25" modified="2025-10-08" version="1">MTEIDKILNEKNNEKIFQKPKFKNINSEQEKFVSQLFSESEADPRDFAALQTLNEQKDISNNEDFEVGEIDKNIKAKIKKDDCSTKNKDTSINRKDIVAKENDRSKEKSGQKIENSTKFVKKTNLKRKAMNKTIVAKREFKTGKICSAEKILDFSQLKMNDISAMMNKMDDFVKKEMTSSFDKFINGLHKCYQNFGFDCQRKIKTVLKLKEKIEETEDKISKVKNLFEKMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK7</accession>
    <name>A0ABV2AMK7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002524</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000951">
        <property type="protein sequence ID" value="MES1920912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="132" mass="15343" checksum="B0E0BCC9328B3D7C" modified="2025-10-08" version="1">MLFLSLNICSIMSKLSNNCDLKIFDPKMVVKLFDKNFDLIECSGNFVISVDDIEYMFYGSKCNGTVYDLINFSNVTCVRFLILTKNLNSTKNLLSEKGYLRDKKFAEKYPTSKPTHFFKIPEQHYHESVLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMU2</accession>
    <name>A0ABV2AMU2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000979">
        <property type="protein sequence ID" value="MES1920960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="234"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="363"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="490"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="247"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="290"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="316"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="363"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="490"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="517"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="579"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="579" mass="61762" checksum="1F6577D5E6901938" modified="2025-10-08" version="1" fragment="single">MFPKDDDSIVQSTPSIVICAESLSRFPSELDGQQESMDDVFGNTCPDTQVAQQLGEQDSSTVSVYSDDDRTSLDQSSDDTLSSVALNRILDAGGDSQTDTLSTMSSQQSSDSVFYVGNALGVDLNGSDCTYAPDDDTLTEKQSPNQSLQNITSNTTSLGGKVTEAMEVAKDVEAIFGALTNILGVTLSTNTSTNDTNIYKCADKSVINGSGDHITGDSIGDDEDIDFEEYECEEEAMNCDQSDKSKTTKRHRNVVNKNRRNRGGKSESTDEDEYKTTSRVKSRSRSRSPNNRDTEKESGRSRSPVRKDVTSTTADQTHDVQDDVNRQIHHVETPELMGEEESVFVAATPKVPTTTLSTDLAVSSATSTSATNTSATNTSTTNTSTTNTPVTIPLSPTASVTIPSSPTAPVVITSSNIPSAAPIIIDPDLLKMVTDSSSTQESNATPLIGTPIFTPSATSEDVIMNGENIETNKRPLDGDADDSNDVKVRKMKDNDESPPIKRPNQQSHAPIQPLPATAQQSHASTQPLPATVQQSHASTQPLPATAQQSHASTQPLPATVQQSHASTQPLPATAQQSHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN61</accession>
    <name>A0ABV2AN61_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DC-UbP/UBTD2 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002699</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001093">
        <property type="protein sequence ID" value="MES1921116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.225.20">
        <property type="entry name" value="Ub domain-containing protein, DC-UbP/UBTD2, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032752">
        <property type="entry name" value="DC-UbP/UBTD2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038169">
        <property type="entry name" value="DC-UbP/UBTD2_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16455">
        <property type="entry name" value="UBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="DC-UbP/UBTD2 N-terminal" evidence="2">
        <location>
            <begin position="6"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13418" checksum="6C9AE4D277E2E81A" modified="2025-10-08" version="1">MGNVNQKIKTKKEIREWKESTTPISRRNLIKQRQNFWSTRIDGNSDNWNILKMEISSEKLETKRRIHSESDLSPLKIDIENHCYKCNDANGYIYTVFITFLVTIFHSSRSKHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN4</accession>
    <name>A0ABV2ANN4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">THO complex subunit 2 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002827</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001209">
        <property type="protein sequence ID" value="MES1921274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040007">
        <property type="entry name" value="Tho2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032302">
        <property type="entry name" value="THOC2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21597:SF0">
        <property type="entry name" value="THO COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21597">
        <property type="entry name" value="THO2 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16134">
        <property type="entry name" value="THOC2_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THO complex subunit 2 N-terminal" evidence="1">
        <location>
            <begin position="12"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="THO complex subunit 2 N-terminal" evidence="1">
        <location>
            <begin position="291"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="459" mass="54254" checksum="64A746AC75C1B375" modified="2025-10-08" version="1" fragment="single">LKTRTFAIESQIKKYDFLHENSEGFSRLIIESSNFEFEKFDQFEKSVWKIIGKYDLSLERALDLLTDFANFYVQNQNLNFLNIFSKFPKQTLCKVFGLKIMNFEGAVPKSFFRLCAYCLKLQIFDISDFYNYIPGDDNEIDEMFFGYEEKSKIEIENVKLEPIPIEGKEKVVTNLPRRRSYPPYSSCPRGHYQNMEFAKITENTKICDICNNSKEQILTCPRCKYQNFNICKKCCLNDAKFSLVNEMLEIGEDCYRLIEKIGMNKIYDHPATKKLIGRKIENIIEESNLKNWDSFLKAFEEIIKILPDQILLFRKRVFSKLCKFLERFLSKKQTNLLFQTDSDHSNNLTKLIKFAIFPTLNAMESNFVYSEKVWAFLSQLNYEKRFEIYGWWLNEGHKRCHKTAFNAKVALLQTMRFRKMHLHKDEKKVGSGKALLKFVHGNSVLVINDLLCNIMHRVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW9</accession>
    <name>A0ABV2ANW9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spermidine resistance protein</fullName>
            <ecNumber evidence="5">4.1.1.50</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SPE2</name>
        <name evidence="5" type="ORF">MHBO_002770</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Amine and polyamine biosynthesis; S-adenosylmethioninamine biosynthesis; S-adenosylmethioninamine from S-adenosyl-L-methionine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic AdoMetDC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.50" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010001153">
        <property type="protein sequence ID" value="MES1921204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004014">
        <property type="term" value="F:adenosylmethionine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.90.10">
        <property type="entry name" value="S-adenosylmethionine decarboxylase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048283">
        <property type="entry name" value="AdoMetDC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016067">
        <property type="entry name" value="S-AdoMet_deCO2ase_core"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11570">
        <property type="entry name" value="S-ADENOSYLMETHIONINE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11570:SF0">
        <property type="entry name" value="S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01536">
        <property type="entry name" value="SAM_decarbox"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56276">
        <property type="entry name" value="S-adenosylmethionine decarboxylase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0620">Polyamine biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0745">Spermidine biosynthesis</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="29012" checksum="D347284B6A690BA9" modified="2025-10-08" version="1">MSFSNCANLKNIESENFEGSEKKLEIKTEGTDLRLISNKKWEKILRMAKCQILSHVSNDFVEAYILSESALFVFQNKMILKTCGTTPLLICIPLILKTFSLNKSLLVYVIYSHSSFLFPQNQPFPHRFKQFAKINCPENQNFLLETLNFPKLLYKNLRNFESERKFLERFFSGKIFVTDTKQEPIFYLYFAQIRPYFPKNEQTVEMVMFNLSKNLAYFYKNNLLFKSESFLLNKIYFWLKNNFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP49</accession>
    <name>A0ABV2AP49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PUL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002982</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001359">
        <property type="protein sequence ID" value="MES1921450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013535">
        <property type="entry name" value="PUL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08324">
        <property type="entry name" value="PUL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51396">
        <property type="entry name" value="PUL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PUL" evidence="1">
        <location>
            <begin position="39"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="36880" checksum="96157BD762DE14E8" modified="2025-10-08" version="1">MLDSTMKNQIKEHLQKFVDSEAVARRKRREEQKSFRIYKTIPIWNKCSLNLTFNCDPEKMFRQIFLNIEKDNEQKSEKDKIKKPEKLVKLVTENSLFHVSEFTKEHRKELLDLLKIKISVFPVFDVVRVLMCHDKFVSDFWSDFELKNKVFERMADSKDFLEMAMASKILSNFIAKKRKRPILNDEDIEIAKQVLRLLDNFYAKSTTLEKSKHCGMFRKSVVVVGSNLAIWTGRDNLNGLLDDYKKLMAALLSFAEELTEEKVLKMAVTTIASLFLKIEKMEKTDKNGLNLALRLVQNYPNLKNLEEDLEKLIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APE0</accession>
    <name>A0ABV2APE0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Derlin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">DERL2_2</name>
        <name evidence="8" type="ORF">MHBO_003079</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Endoplasmic reticulum membrane</location>
            <topology evidence="1 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the derlin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001473">
        <property type="protein sequence ID" value="MES1921550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035243">
        <property type="term" value="F:protein-arginine omega-N symmetric methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007599">
        <property type="entry name" value="DER1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11009">
        <property type="entry name" value="DER1-LIKE PROTEIN, DERLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04511">
        <property type="entry name" value="DER1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="20106" checksum="C73DFFE01DBCBF81" modified="2025-10-08" version="1">MNYDVGSLFSDIPFFTKSYIFASISTTALCKLNYLSPLKLYFHIERIKDGQLWRLITSFFFFGSKLDLNLIFQLFFFCRYSSSLEEEFIGRSSDFVYMLFVGWTMILLLGSFFSVIFLGSAFSFMLAYIWCRRNHDTRMNLMGLFNFPASYLPFLKFFAYLILKAHNIFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APH4</accession>
    <name>A0ABV2APH4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Vacuolar amino acid transporter 7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">AVT7</name>
        <name evidence="11" type="ORF">MHBO_003105</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Vacuole membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001497">
        <property type="protein sequence ID" value="MES1921573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF678">
        <property type="entry name" value="VACUOLAR AMINO ACID TRANSPORTER 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <keyword evidence="4" id="KW-0926">Vacuole</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="64"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="203"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="246"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="10">
        <location>
            <begin position="69"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="31372" checksum="45EF4498A47547B0" modified="2025-10-08" version="1" fragment="single">MVNKLKKAKEDIEELKRKTDDKREIDFKAHENTENGSKDPLKSDSFDLELSQNQKTDYWLDKPFGVVIFTLNMAKNIIGSFLIFIPWTFTLSGVVLGNIMLVLIYFFTAYSFSLIGFLGKKTRKNSYSLMFEDIGTWLVVLVDFSIIGITISANAGYQLVISSRIMSIIKFYQNYDFPNWAIVLIVSIFVLFPLSLFKRLDSLRFVSITAFVAIIFLVAGILYFIFDLDTSKAEISLFSKTPYSFFVAFPILAGNFDCHTNAVTFFLEYSDKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS0</accession>
    <name>A0ABV2APS0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003206</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001621">
        <property type="protein sequence ID" value="MES1921675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045068">
        <property type="entry name" value="BACURD1-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003131">
        <property type="entry name" value="T1-type_BTB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11145">
        <property type="entry name" value="BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11145:SF8">
        <property type="entry name" value="RE57120P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02214">
        <property type="entry name" value="BTB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00225">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BTB" evidence="2">
        <location>
            <begin position="67"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="279" mass="32207" checksum="4D38D12D534373E7" modified="2025-10-08" version="1">MENLQNNSLKRPSLPSNKIETSQSKKNKSVPDINSIKIQKSNQEISPQNSVENILSSIKKINSDSSNIVTLNVSGKIFHVHSQTLEKHPDSTLGILAVSGYFEKNKKPLFLDRDNTLFPLILSFYRNGNIRLPKNVSKKALFDEISYFKLPIKFSEILEEEEIWTKIAKTIKKNVKNEVLRSILVSLAFEKDERIRFFYNIEEKSKGKTACLDAARVECPYCKQIVYFHTSDWFCLMRSHPGTWLRSEQQWSCCSSRNILLDGCTRQKHYNCLGFNGEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ13</accession>
    <name>A0ABV2AQ13_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Kinesin-like protein kifc1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">KIFC1</name>
        <name evidence="8" type="ORF">MHBO_003302</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001746">
        <property type="protein sequence ID" value="MES1921771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027640">
        <property type="entry name" value="Kinesin-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001752">
        <property type="entry name" value="Kinesin_motor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47972">
        <property type="entry name" value="KINESIN-LIKE PROTEIN KLP-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47972:SF45">
        <property type="entry name" value="PROTEIN CLARET SEGREGATIONAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00225">
        <property type="entry name" value="Kinesin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00380">
        <property type="entry name" value="KINESINHEAVY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00129">
        <property type="entry name" value="KISc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50067">
        <property type="entry name" value="KINESIN_MOTOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0493">Microtubule</keyword>
    <keyword evidence="4 5" id="KW-0505">Motor protein</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinesin motor" evidence="7">
        <location>
            <begin position="18"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="268"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="113"/>
            <end position="120"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="288" mass="33112" checksum="1EB4EBA44A7C0458" modified="2025-10-08" version="1" fragment="single">QDEIRKKLHNQVQELKGNIRVYCRVRPLVKTDKHFGKQNISFEFPEDSLNQKIVALTKKQNNLKSKKLKIVKREISFDRVFSPNDKQNVVFEEISQLVQSALDGYKVCIFAYGQTGSGKTFTMEGPENMNNKNDEGMIPRSVKKIFEHIREHKKNWEYKCEVSFLEIYNEEIRDLLTSENKNIQISLEDEYKPAKNAKYVKVTSESEIEPLLRTAKKNRSVGKTDVNEYSSRSHSIFQIILNGKNPETGFSVNGALVLVDLAGSERLKKSNSTGQRKEEAKFINSSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ59</accession>
    <name>A0ABV2AQ59_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein S2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003076</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001472">
        <property type="protein sequence ID" value="MES1921548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="253" mass="28996" checksum="E5A0DF06A6D50FA1" modified="2025-10-08" version="1">MLVSLSQPAPIPFQKYNVRPTTIKKKLKHNPLTNLIKTAATKTGIFEKENSVVKMPPFYHKMNKLQILIDLYNETLNENLSFNKTAKILGEEIRYGIKVITFNTCLNKISNDFESLFLEKRDLYVVGLQQVPNITNLNENILESIKKNHGSDIFSLVFSCVSDKTALLVFASERMEHEISNVEMRKIGKNVALRMSVGDSTLCLVTSEFDSQGAIGVENVLRNIKFPKTLWDLKKDKIFESEFYKFDYNNLNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ75</accession>
    <name>A0ABV2AQ75_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003369</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001829">
        <property type="protein sequence ID" value="MES1921831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="335" mass="39351" checksum="3F09A3C1B29E08DC" modified="2025-10-08" version="1">MPKRPLRHQFKLNATLESLINQIISIMVPKSVDEEDRLVENFSLYFRNEGNEIDSNNEKITDSILKSLLPDVESNVIFHSSEKIPLKENPNKKLSTKHSNLDDNILNQIINPNLRTIKIDLINIEIEDFDNRIFDIQIKPKSKYFDLLNMIEYVYSTQNSNKMIKHCSLYEKNEIDDKFRIIESAEIPNKKFQKLFFLKNNLNGDFKQICVCCVSIPNEIKLKFNNNDNLQNVLIQSCKTFRDRKYDLRDENFDNNFNPKFLNISYRIDDNNHVLDLDKKVADLSHFELKIFPKKFQDRPSIEKKMSVSSFSNSRTSLILHRMGLSAKSLTVCFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQE2</accession>
    <name>A0ABV2AQE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003167</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001576">
        <property type="protein sequence ID" value="MES1921638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="205" mass="23193" checksum="77B8C5A26932E39A" modified="2025-10-08" version="1">MIYFNTNNVLMNLEDHIKALSKLEEELEKGLPEIAKYVATNDLIALITRRVIGSQEDYTGKPFKSYSTKPMLTNRTALTSRAYSSVAGSKKKRRDLDWVTINGHKLFELKGGYAEYRNLLGHTNKNKSFELTGEMWRKFGILSVSTSNYITTVIMGGTNEASQMKIDANSAREGVSIIEASKKEIEIAEKSMQKWLEDVVSRNLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQI5</accession>
    <name>A0ABV2AQI5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copine-1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">CPNE1</name>
        <name evidence="3" type="ORF">MHBO_003279</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the copine family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001712">
        <property type="protein sequence ID" value="MES1921749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045052">
        <property type="entry name" value="Copine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010734">
        <property type="entry name" value="Copine_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857:SF106">
        <property type="entry name" value="C2 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857">
        <property type="entry name" value="COPINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07002">
        <property type="entry name" value="Copine"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="2">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="386" mass="43368" checksum="BDBD6CD49B8D609C" modified="2025-10-08" version="1" fragment="single">IKKNLNPYWKPFKVSSLDLCDNNYNEDIRLRVWDYDKIGKNDLIGEAYLKVNDLKTSATFDLKIHGKSKSQGKVEIGTFKKTKMYCFDDYLKGGLCFTTIIAIDFSEQNKPIRSPDSLHYLGGANEYESAFRACAQTIANIDSDQKIPVWGFSARLNGQLSRCFSLTFNPSMPKVNGVQEVIDCYRNALNCVSLGSPKELLEVLNTVKMLVEQKLVMGVNEYFVLFIFVSPGDIADIAKVKDMIVELSDMPLSVIFVGIGAGDFSKLSFLDDGWRRFRSSVGKKCLRDSVDLIRYRSLFSRSQNNQIEAIMQGEIYKTITEQSLEYFKMKKMVPGQTSVAGVGFGSSAPMFNRSVNTNMGLGNINPMMGQQQNQMMNRPAMNPMAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ7</accession>
    <name>A0ABV2AQJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003353</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001810">
        <property type="protein sequence ID" value="MES1921819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="17193" checksum="37EE9EF21E83A4B4" modified="2025-10-08" version="1">MYGIADSKMPVTYSKETCKISDPNKTFELSKEQILSHCFYEDPKDGSTFFSNFENNLFLDKAYVLCPEGLLSNGKNYFEIECVEGTALANGRCGVSSELSGHDSTNFLEYYEKTVFQTSVLPLSVCSLLLSFAVFLIGYFKCCLPKNVQLIVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK5</accession>
    <name>A0ABV2AQK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003487</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001995">
        <property type="protein sequence ID" value="MES1921962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11364" checksum="7507DBD6F1C0E9D1" modified="2025-10-08" version="1">MLENKAEFISSLIFGIIVLLAIGFISGCAVSALILNDDHLSLIMQLRKPKKGSAEQTSPTVNMLESDILDNAEEGTYIAVDNGVYDKLGKNRPHAPIFKLYSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQS5</accession>
    <name>A0ABV2AQS5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003242</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001668">
        <property type="protein sequence ID" value="MES1921712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19544" checksum="1B4BF2E08FAB4D67" modified="2025-10-08" version="1" fragment="single">MSANLFVSKETKNLRKEMAACQDLINDNRYDCFKDWNFNFENFGDEKNNLYWTNIYGIFEPERIDEIYIERSFQTANSETDGINLFKLAFQSKSNGLFIPDDPSVENLFTAISRKRNDQEAHFNDKAVSSTTFSYFVGIFGLFVIVIVGNYLYNQMSDNLGCLFDDSDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT3</accession>
    <name>A0ABV2AQT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">E3 ubiquitin-protein ligase ubr1</fullName>
            <ecNumber evidence="5">2.3.2.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">UBR1</name>
        <name evidence="5" type="ORF">MHBO_003424</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010001910">
        <property type="protein sequence ID" value="MES1921894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003126">
        <property type="entry name" value="Znf_UBR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02207">
        <property type="entry name" value="zf-UBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="UBR-type" evidence="4">
        <location>
            <begin position="10"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5792" checksum="77407B16EAB7625A" modified="2025-10-08" version="1">MESHSLQNGVCARQFKEGEPAYRCTDCQKDSYCIQCLPCFRVFLPKNAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR85</accession>
    <name>A0ABV2AR85_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003498</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MICOS complex subunit Mic60 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002010">
        <property type="protein sequence ID" value="MES1921971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019133">
        <property type="entry name" value="MIC60"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15415:SF7">
        <property type="entry name" value="MICOS COMPLEX SUBUNIT MIC60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15415">
        <property type="entry name" value="MITOFILIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09731">
        <property type="entry name" value="Mitofilin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13750" checksum="16F6CA21EF6F1DC7" modified="2025-10-08" version="1">MSKQSLKNWFLFDVEKSMRQAILAKNSNNPFRHVLAYIISRLSKNESAYVEGNGPAKTLSRTCYFVRKNDFARAVEEMDTLTGFQKTVCGDWENEAKRYLELKQLLDVTKTFVRMNDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC4</accession>
    <name>A0ABV2ARC4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003606</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002199">
        <property type="protein sequence ID" value="MES1922089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051023">
        <property type="entry name" value="PP2A_Regulatory_Subunit_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10648:SF1">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="245" mass="28380" checksum="F61DB7D9A6FD0F54" modified="2025-10-08" version="1" fragment="single">ISVRKAIAAVTPDIAKIIGKANTCKYLFEPFGNFLSDETEIRIQALKRSDEFMSFLNNEEKIILFDKIFSNVKNSGVVWEIRHIAAKQISAFVELLDRKTISEKVASLFLELINDSVYRVRFETTKNLGRLLNYFESVDPEYSTILEKQCSFFASSAMSSHRQLFIKICENLLDVIPTKKFCEYYKKAISLNGDKVVNVRITLAAFLRRNRRFLEKLDYEKTKSTIEKLKKDVDIDVRNECGIFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR1</accession>
    <name>A0ABV2ARR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003858</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002641">
        <property type="protein sequence ID" value="MES1922350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15431" checksum="18BD35273F8B3905" modified="2025-10-08" version="1" fragment="single">VFKFILDFETIVSLYTKTLFPESTNFQNDLIDNLFSMRSHITEKIILSIISKFIPNDEENNLFKKELLAILEIEEQILDKIVNSPDLFVMDAKRNPSTKQEKEQILKNGSTELKAFIALICFVHLALDGFYKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS0</accession>
    <name>A0ABV2ARS0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003877</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002678">
        <property type="protein sequence ID" value="MES1922370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10500" checksum="A6E70EE725D08472" modified="2025-10-08" version="1">MVNDLKYSYKAKYVYFDDEDKVISTDVVTMEKEEFKLQPYRVFPRNADRVEIHLSIMTYGINGRSLDYMFRESPKKVEVSVMREPYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ9</accession>
    <name>A0ABV2ARZ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Coatomer alpha subunit C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003957</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002821">
        <property type="protein sequence ID" value="MES1922442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010714">
        <property type="entry name" value="Coatomer_asu_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06957">
        <property type="entry name" value="COPI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Coatomer alpha subunit C-terminal" evidence="1">
        <location>
            <begin position="2"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="19615" checksum="F516E71F0AFE6188" modified="2025-10-08" version="1" fragment="single">KANEILNFCREYILALRCSKERADCKSQKRAFELSCYWTQLGLKPIHTFLGLLYAVNMGKALGFDKTTAVLCRRCLELGVDIELPQTTRKTLESVSQVLSEVQDSRKSAEKLKMDLRERLELDAKKLVPLESSEERRICGYCKSLYGVESGENNVCGVCQIGGVGNASFDGFSDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS15</accession>
    <name>A0ABV2AS15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003972</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002866">
        <property type="protein sequence ID" value="MES1922457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="28465" checksum="EEAAE02DE578A381" modified="2025-10-08" version="1">MSEEDENFRWINTAKSYASHTAQFFHSFNFPEEKQVGRNLKKYPIIRLEILSAASMKNLIFVSYVIFIISLILSSFERSLRRSTENLDQIKIDKNGAMAVWNKKFSVNLNNRFFELNGFIDSFKIKSQNAQFRFDFGVDLSVISKNGEKLRNWNSSVYFGYSRYNKDKNIILVSEEKSPFGYYWQDKIFESGGSNEDLVILNIQIFLKNFSIENVDDDISIKMKFVKTNNVNHFILQYFAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS56</accession>
    <name>A0ABV2AS56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004016</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002964">
        <property type="protein sequence ID" value="MES1922498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="11905" checksum="79FB912990E04065" modified="2025-10-08" version="1" fragment="single">YLEKANLLDNMLRGSAIFTAVGIFFTIISYACNKYSCLWITTIPVVLFVLVLTGLLEMILFNAILKKIGFGVERGINFYVFVCVGIFMTVPAIFECCLSRVKKPVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS98</accession>
    <name>A0ABV2AS98_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Clathrin/coatomer adaptor adaptin-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004061</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the adaptor complexes large subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003065">
        <property type="protein sequence ID" value="MES1922546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026739">
        <property type="entry name" value="AP_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11134">
        <property type="entry name" value="ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Clathrin/coatomer adaptor adaptin-like N-terminal" evidence="6">
        <location>
            <begin position="2"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="247" mass="28090" checksum="F2755A734EF76022" modified="2025-10-08" version="1" fragment="single">ELQYIVLKNLKILLKAHPNFLKDYTRVLFCKYNDPPYIKSEKIDLLVLIADSSNAEQILLEFNDYSREVDVDLARLGIRAIGKVALRLPSKLNQCINVLRSLLTLKRNHIANEISVVLKQIFDAFPDYRRLNVVEELAENPELIDRSDSTEAFIWLLGALHGKLKIDVLEALKYYFEGFQESEDGVRDQLLSAAVKCYVAEPTGEGKQLCEAALSAAENFERSIDLNEQAAFYKRVLNLGADDAKRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC3</accession>
    <name>A0ABV2ASC3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003854</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002623">
        <property type="protein sequence ID" value="MES1922346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12855" checksum="B383539E098F43B9" modified="2025-10-08" version="1">MLNKFYILDLTLMANYTYTLLLADFVKKSMAHKLSTLLSDDPTISQYVKHRKLLKQHPGDTILKKSYEVALTNLQLAVSRKHMELMKRGHSTSLKYAEELMQYWGMYYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASC5</accession>
    <name>A0ABV2ASC5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003091">
        <property type="protein sequence ID" value="MES1922560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="5950" checksum="988BA1BD9F42E077" modified="2025-10-08" version="1" fragment="single">MVTDGMGADVLATDVVGADGMVTDGVATDVLVAGVLVADVLVAGVLVAGVLVTDVLVAGVLVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE6</accession>
    <name>A0ABV2ASE6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004012</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002957">
        <property type="protein sequence ID" value="MES1922494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="169" mass="19628" checksum="510AB3572BFCA0F8" modified="2025-10-08" version="1" fragment="single">MCIKKLKELINSRKFKAVFLMRNNSCYEQFVKYAEVAKSFGWDVHVFYPEFLSSSLHLLFVCLQSVYQRSFKGDHPTFKSVPIKRQIEITLSFFACFRRAKESATVDSVSSIQWISPNAVENKMSVKPRRREAEYLRCLVKMYLNSDSPFSVSISEHSFDVLSLLGIKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH0</accession>
    <name>A0ABV2ASH0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004122</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003200">
        <property type="protein sequence ID" value="MES1922605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="108" mass="12436" checksum="1E41FB2C6972096F" modified="2025-10-08" version="1">MAKFFLVGIITAGCMFKTRPTKDSFRSFNEKYENDGNRFGFLTVLEKTVRMKAKLYEYESLAEIKYEDFGFFCVGTANATETLKFVGAFGLWFPINSNEVTNIRYCSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL1</accession>
    <name>A0ABV2ASL1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Peptidase S26 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004178</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peptidase S26 family. IMP1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003351">
        <property type="protein sequence ID" value="MES1922660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.109.10">
        <property type="entry name" value="Umud Fragment, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052064">
        <property type="entry name" value="Mito_IMP1_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000223">
        <property type="entry name" value="Pept_S26A_signal_pept_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019758">
        <property type="entry name" value="Pept_S26A_signal_pept_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12383:SF16">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12383">
        <property type="entry name" value="PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00727">
        <property type="entry name" value="LEADERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="LexA/Signal peptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00761">
        <property type="entry name" value="SPASE_I_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="2" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase S26" evidence="7">
        <location>
            <begin position="85"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00038445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="22945" checksum="4CDD9545DB635D76" modified="2025-10-08" version="1">MRPLFREKKYGIDFAIYRSIDQEVASNLKRGENGLCDTKNNNVVERGNVIVARSRGKNVAKRLAGIEDEIVEIKPKIDKPTNEKLFVLVPKKHIWILGDNTNKSVDSRYYGSIGIENLKGVIVWKLWPYDRFFGRIKKLEEKEGVLCSLKNKDELIDKGKTNIFFYKNKTNSKFLLVDNENNSEILYFGDVLRKINET</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP0</accession>
    <name>A0ABV2ASP0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ACB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004017</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ACBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002964">
        <property type="protein sequence ID" value="MES1922499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022408">
        <property type="entry name" value="Acyl-CoA-binding_prot_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000582">
        <property type="entry name" value="Acyl-CoA-binding_protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035984">
        <property type="entry name" value="Acyl-CoA-binding_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014352">
        <property type="entry name" value="FERM/acyl-CoA-bd_prot_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23310:SF62">
        <property type="entry name" value="ACYL-COA BINDING PROTEIN 1, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23310">
        <property type="entry name" value="ACYL-COA-BINDING PROTEIN, ACBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00887">
        <property type="entry name" value="ACBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00689">
        <property type="entry name" value="ACOABINDINGP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47027">
        <property type="entry name" value="Acyl-CoA binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00880">
        <property type="entry name" value="ACB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51228">
        <property type="entry name" value="ACB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACB" evidence="3">
        <location>
            <begin position="6"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="11374" checksum="12B376B66E6C0ED4" modified="2025-10-08" version="1">MAESDIEKKFKKAEEHVRNLPKSGPFSPSREQKLKMYSFFKQATIGDNKEKKPWAIQIEKSLKWGAWKKLEGMDKEKAMEQYVLLLKQLDPDFAVNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR3</accession>
    <name>A0ABV2ASR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002995">
        <property type="protein sequence ID" value="MES1922514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10411" checksum="29322DCF886642A4" modified="2025-10-08" version="1" fragment="single">MTPNVSERCILFFNPGQCVAVEQESRFIGFRADFKVIGWVNLPMFSFGDTTAIQAKILDNIPEFLDPVEKLCKIRVKFLGSDDPDSGIFSEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS2</accession>
    <name>A0ABV2ASS2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004251</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003521">
        <property type="protein sequence ID" value="MES1922728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="273" mass="31409" checksum="F9AEBC81A84D0754" modified="2025-10-08" version="1" fragment="single">MPANVFADNVKSREAIMNPNRVYKNKIVKEWLTDVNIVDGDMMVGRYSLDMQEELLNDEDIAKSLADPSSVTFNQLFVGKVKTDPEYQSIVRILSDHNISGYTIDGFNTAITNPDVLDMMRNMKPGKEPFNTKMVDERAQVFFKSNLYSYPDFEKQYYPKINHDQSVQVRAKFANVLNKTYNKKAEEKALRVVGIDSVKTSEAYERRRQYASKLKSDIYTDLARIKDEIKANKIYRANNKYEFNKSLITKDYSILTRDVNGVNATAINMGSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT19</accession>
    <name>A0ABV2AT19_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004100</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003150">
        <property type="protein sequence ID" value="MES1922586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00340">
        <property type="entry name" value="GSH_Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029760">
        <property type="entry name" value="GPX_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="GLUTATHIONE PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592:SF78">
        <property type="entry name" value="GLUTATHIONE PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000303">
        <property type="entry name" value="Glutathion_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01011">
        <property type="entry name" value="GLUTPROXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00763">
        <property type="entry name" value="GLUTATHIONE_PEROXID_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 4" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="177" mass="20458" checksum="AF5D4859890EF28C" modified="2025-10-08" version="1">MGLFKALFASGVYKAKNLYKEEMGSFFSLSFKDLDGSLVNFDKFDKNVVLVINVGSKCGLADPSYKQMNRLYSKYQSKNFTILAFPSGQFSNQEYSDSKEIKAFVESKNAKFPVFEKSDVNGDKANPVYKWLKKAFPGEITWNFHTKFIVDRSGKPVRRFEKKTSWEEIERDIVKYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT50</accession>
    <name>A0ABV2AT50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcription factor TFIIIB subunit brf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">BRF1_2</name>
        <name evidence="1" type="ORF">MHBO_004384</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003899">
        <property type="protein sequence ID" value="MES1922855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="12757" checksum="8FF1A0235830BC55" modified="2025-10-08" version="1" fragment="single">MNVRFCNSCKTKTQWDSTPVCTQCGCFSDPKDDNTFFSETIEYSEKREVGTSVSGPEKTRVKKIRSGGYRTGASVDSSWETFEKGKRVVSNIASALNLPLVIINSANNTYRLGLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA5</accession>
    <name>A0ABV2ATA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Myo-inositol-1-phosphate synthase</fullName>
            <ecNumber evidence="1">5.5.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">INO1</name>
        <name evidence="1" type="ORF">MHBO_004146</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.5.1.4" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003274">
        <property type="protein sequence ID" value="MES1922628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004512">
        <property type="term" value="F:inositol-3-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002587">
        <property type="entry name" value="Myo-inos-1-P_Synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11510">
        <property type="entry name" value="MYO-INOSITOL-1 PHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07994">
        <property type="entry name" value="NAD_binding_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="275" mass="30913" checksum="2702D268E5904181" modified="2025-10-08" version="1">MTIKSQSAKTSAQKRIHVNSDNVRYSNDSIFSLFSYHHNHVTEKSEQIEIEPKIANFVIRTKRKVPRTGLMLVGLGGNNGSTVAAGIIANRRNLSWKSRRGVHNANYLGSLTQSATLKMGDANGREKYFPFKRVLPLLNPDDLVVSGWDISGADLKTAMERAQVLPLGLQNRLSEEMAGIKPLPSVYYPDFIAANQNERADNLLEGSRASLLHLEKIRRDIRLFKEKEKLEKVIVLWTANTERFCEVTEGVHDTEQSFMKALKEGHSEISPSQVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC2</accession>
    <name>A0ABV2ATC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004416</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003965">
        <property type="protein sequence ID" value="MES1922887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19314" checksum="91FC0C81CD0568B8" modified="2025-10-08" version="1" fragment="single">RFFFSEPTIFDSDGKMIKDCLEQIVKPVIYYCYNYDINKSPKNEKSKSLLRKSMSTTIRILIGNIDVMIDRIQSEYGKYFVQFVALIADLAAKFYAKNGDETFIAKISESLKNLFHVCKNDKKFLNYKNAKNENLMQEILKMSRHFHEAIKKGIVEGITDSNLNKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD1</accession>
    <name>A0ABV2ATD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Translation initiation factor 3 subunit b</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PRT1</name>
        <name evidence="7" type="ORF">MHBO_004452</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004052">
        <property type="protein sequence ID" value="MES1922923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011400">
        <property type="entry name" value="EIF3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011041">
        <property type="entry name" value="Quinoprot_gluc/sorb_DH_b-prop"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013979">
        <property type="entry name" value="TIF_beta_prop-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14068">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14068:SF0">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08662">
        <property type="entry name" value="eIF2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50952">
        <property type="entry name" value="Soluble quinoprotein glucose dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Translation initiation factor beta propellor-like" evidence="6">
        <location>
            <begin position="14"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="159"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="245" mass="28129" checksum="19C8B57EF3CD469D" modified="2025-10-08" version="1" fragment="single">VLHSSFSPMKPLLAAVYVFKNQYHVSVFDLKKDEEIVHLQREKVNRVLWSPCGLRLVAVGLSSGGDACNGGLVFVDCETRLVIKKQSHFNCNSADWSPFGRFLMTAILDKSGLVDNRTAQRSYNIYDSAGELVVSQNSSQLKQFLWRPRPKLKESAEPNSEKRQELEKLDESVRLLNVNEEERLRGNRLTNYRNAMAGLACSLEEERKLIEKLRKDLIVVSLEEEVEIEKDVRVEVERFVEEMDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATI7</accession>
    <name>A0ABV2ATI7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pre-mRNA-processing factor 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PRPF6_3</name>
        <name evidence="2" type="ORF">MHBO_004513</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004239">
        <property type="protein sequence ID" value="MES1922981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045075">
        <property type="entry name" value="Syf1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246:SF1">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14559">
        <property type="entry name" value="TPR_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21792" checksum="9919531CB0B8DF78" modified="2025-10-08" version="1" fragment="single">AAKLGKIVTARAIYSKMLQHFPNDSAIWWDAIMLEKNNKQDLVPLLQKGVKECPSSEALWLLLSKTKWLNADLDGARQVLASAAKVNSKSESICLAAVKLEFEENNFESARKILETARERINSARIWMKSALLEREMANFGRENEILLEAVTKFPKMKNFKVWLMLCQSFERLGDFESARNFYVKSVSSIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP0</accession>
    <name>A0ABV2ATP0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004564</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004410">
        <property type="protein sequence ID" value="MES1923030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="76"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="13351" checksum="601D95FC7E92E680" modified="2025-10-08" version="1" fragment="single">MKRDLKTCEQKHRFDIQNINQQRAFDAENHKLESNKLKDETKRNKELTGQLAAVNNKLTESERTVTRLTVDRDRYKSHYEDTKEHLKKAESRNDKIETLNRHQQQQVGGNGTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR2</accession>
    <name>A0ABV2ATR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004537</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004308">
        <property type="protein sequence ID" value="MES1923004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="108"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="15842" checksum="B3B665AD6B68F976" modified="2025-10-08" version="1">MLKKLLLVAGAAIGGIYLTSEEGKSARESLLKKKSAFEPIVKDLLKQTNEILEGSKNIDSKEVKANIDLLVNQAKQSLIDLDLDKTSETIKDAIRVASKQIRKAVNESEKELKNSKKKVVAKKMQVKTRKTQPVKKATVKKAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT6</accession>
    <name>A0ABV2ATT6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Shieldin complex subunit 2 first OB fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004331</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003783">
        <property type="protein sequence ID" value="MES1922808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049507">
        <property type="entry name" value="SHLD2_OB1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21669">
        <property type="entry name" value="SHLD2_OB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shieldin complex subunit 2 first OB fold" evidence="1">
        <location>
            <begin position="18"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9476" checksum="8D0AAD86DC02BB3A" modified="2025-10-08" version="1">MYIFAQFLSIISTLQEEAMRQVFVKEDQVKIKNIFVEDTSEKCKVALWRSAAEEDVRPGDFVEITDVVINVFRNGLVIHVMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU71</accession>
    <name>A0ABV2AU71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004767</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005161">
        <property type="protein sequence ID" value="MES1923223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="17083" checksum="F3752084DD7D6529" modified="2025-10-08" version="1">MGMQALQADLEQSQFKVKQMIASEEARMQSMQESREQQDIAGLGAELAAGRSQYETGMAGAIKGVGAIGSTLMGTQLPQGAASTRTNYGSPTTIDPIQTGVDTSMYADPNIGGRIGASPYGTGVSGYGTDPNLGGRIVPNYGSLATINPIGTGGSGYIDPNQFRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ8</accession>
    <name>A0ABV2AUJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ubiquitin carboxyl-terminal hydrolase 15</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">USP15_2</name>
        <name evidence="3" type="ORF">MHBO_004689</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010004884">
        <property type="protein sequence ID" value="MES1923144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050185">
        <property type="entry name" value="Ub_carboxyl-term_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="2">
        <location>
            <begin position="92"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="22"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="15723" checksum="5B0C1BB78D9CB7B0" modified="2025-10-08" version="1" fragment="single">AILLTKDLETEKIKLRNKHKSNKAESRFSETTKSKNNDLFGQSSKLNDEIVDNVEIDSFNKNTDKMADDSDEQLTEGEEKSNPPLFKTKGLVGLFNLGYTCFMNSTLQCLSNTKVLTDYFISNRYLNDINSENPLGWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM5</accession>
    <name>A0ABV2AUM5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004917</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005783">
        <property type="protein sequence ID" value="MES1923353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16359" checksum="FF38373B7A885ACB" modified="2025-10-08" version="1" fragment="single">MSNFIVGQIKCRSVKKRVEEEVSLAESSAFSSMLDIVKEIKQCGGKRGASVRLKRVLEEESRDGVKRAKKETQDNEQNKKKKVTKKPQTPKAKPKLSVQKELRLREAMAFAGISLTTDNTSPEKHERTTAHTPERTLVSQKSIHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV7</accession>
    <name>A0ABV2AUV7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005022</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006249">
        <property type="protein sequence ID" value="MES1923449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="19276" checksum="D43486709A2F1B36" modified="2025-10-08" version="1" fragment="single">MTNIRKSNRLSTRKKKSYIDFKNSTDSEDFKLEKFDTEAYSSSSNDISNKNKKFKKSDPFFDNLGDDYVLREDSEKFQIGDKLIFVKKLAKNHKDINRQFFGYLDNLGNIEECFVKEIYYEKSLTGNNQRYINFEFEKHPFLSINLLYDKNFAFLIPCFIAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUZ7</accession>
    <name>A0ABV2AUZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006353">
        <property type="protein sequence ID" value="MES1923473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11806" checksum="172815573A9CA651" modified="2025-10-08" version="1">MPCFEISSEIDVPVHLEPGVIVKTPVQPNKTAERKSHSNKKYSWRRDNPKGEDFISEKCAAVKYRRAQHVKENIYEEGVKLELRDDSDQMFLKVWMKVDSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV03</accession>
    <name>A0ABV2AV03_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005066</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006431">
        <property type="protein sequence ID" value="MES1923490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964:SF113">
        <property type="entry name" value="USPA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="19"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="16815" checksum="08522E6FB56C3CF6" modified="2025-10-08" version="1" fragment="single">MAQNGVEIKDVIDVKRETGKILFAYDESDHSKIALQKLIQYHLKPGDELYILNVHPEMKAVSQLVKDKSNYEATYMKKVALIKSVAAMIEAKHNVQTFSIVKIGEAREVIRKAISEFGITQLILGSRGLGNIKGMLLGSVSSYCVRQCNCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV85</accession>
    <name>A0ABV2AV85_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005173</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006970">
        <property type="protein sequence ID" value="MES1923577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="20841" checksum="C57B250A60E302FC" modified="2025-10-08" version="1" fragment="single">LTKYKKWSSRSTIQDNTEKFNAGTVDFSTLSQHYDTESQIDDQNPKNTLSFAVGPFLTDLREKSHEHHILLPNIDKKSSQNDLSYFQENESKDFDSEDSKYITESAETESQWRSPINHYKQLNKWLSLCSGPLIPAKLYALKNYFVFAGKMFFMGTSDSIDIQATATKHTPRAKNIIKMLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD6</accession>
    <name>A0ABV2AVD6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005208</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007160">
        <property type="protein sequence ID" value="MES1923604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7404" checksum="8BEB1D57561AD7B7" modified="2025-10-08" version="1">MLTRQSNAPPTILLLPCTKAGRRHACQAREEMFLVYLFGVLTGLSASIMRGVFFAYPHCQDLPVHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE8</accession>
    <name>A0ABV2AVE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005224</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007218">
        <property type="protein sequence ID" value="MES1923619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="17581" checksum="5336AB279A817F5B" modified="2025-10-08" version="1">MYYSEYAQWIPGLLMLFILQMSFQSLKLMLKDVRKSMLFFLVNCDFDIEKRIQMVNRMAFCRPSHLVRASHDKGILYEKCYSNLENRIVEFLLILKRKTNTRRVHGFITQVDNLLGKLRRRKSHEPSKLTKKCLKNIKAYVYFDFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVW9</accession>
    <name>A0ABV2AVW9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GGDEF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005156</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006914">
        <property type="protein sequence ID" value="MES1923564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="Nucleotide cyclase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="1">
        <location>
            <begin position="3"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10172" checksum="DDEBD46CB89799DD" modified="2025-10-08" version="1">MTIIRGEDLAARISGRTFTLTLPDTNYEDAANVLKRIEGIVKRTQFICETDCSPISVELTAQIIESNGETSAQELFTKQPSTFNHLPDVKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER5</accession>
    <name>A0ABV2AER5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005288</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000026">
        <property type="protein sequence ID" value="MES1918201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="14674" checksum="B617C056BBE177E9" modified="2025-10-08" version="1">MPAKRFFGGVNINISADCDVDSLKVCVETIRELISGRRFISITIDGKDFDETKFEAFDMYVDFIIYQTEPENIAEFTESVKIYKGKSQLVAELSYSPNIVGSLMMLLSNSKYGGIVASSLDGENIKLVSMFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFB9</accession>
    <name>A0ABV2AFB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Structural maintenance of chromosomes protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">SMC4_1</name>
        <name evidence="7" type="ORF">MHBO_000350</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000050">
        <property type="protein sequence ID" value="MES1918378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937:SF172">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RecF/RecN/SMC N-terminal" evidence="6">
        <location>
            <begin position="15"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="278"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="351"/>
            <end position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="480" mass="54421" checksum="5234646BEB023A5D" modified="2025-10-08" version="1">MIESTNKKEDGRLVLEKMTLFNFKSYKGSIEIGPFHKRFTSVVGPNGSGKSNIIDALLFVFGRRSSDIRFKRITDLIYKSPEDKSESSCRVTIHFCSVVDRDNLRADGAPSNDEFLVVENSAFTVSREVTSSGASKYRVDEKTVAFRDICALLKTKGIDLRNNRFLILQGEVESIAQMKPVGASEGETGLLEYLEEIIGSNRFVPKIENALGRVEEFAEQRQESFSRVKLVEREKESMEGSRKEAMRYLSKEWEYLEKNIRLQLVHSFYLQKGLKTIIANEERLRAQEKTEREELEKAETDLEKRATAFGEEQRVFEEIDARCRRIAAEFSALEEQDASLNVNIAYQTKRLKRFEARLAAEAAKAEQAEENANVSRVEIPKLEKQLAHLEKLRAEANRNLDSICETVHRNTAELRTELEAKETELIPFKKAVDSARQRVAALAGELAAVEERAKADGESARKTSAEIAEAKAKAKKEFSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH5</accession>
    <name>A0ABV2AFH5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">GSH2</name>
        <name evidence="3" type="ORF">MHBO_000144</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000018">
        <property type="protein sequence ID" value="MES1918128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1080.10">
        <property type="entry name" value="Glutathione Synthetase, Chain A, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005615">
        <property type="entry name" value="Glutathione_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014042">
        <property type="entry name" value="Glutathione_synthase_a-hlx"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11130">
        <property type="entry name" value="GLUTATHIONE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11130:SF0">
        <property type="entry name" value="GLUTATHIONE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03917">
        <property type="entry name" value="GSH_synth_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56059">
        <property type="entry name" value="Glutathione synthetase ATP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="134"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="20"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="67"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="27595" checksum="5754055EEA8A6BE4" modified="2025-10-08" version="1">MSSQNTKIENNLKNEQNFENVDKNDQNLDKNEQNFENVDKNDQNLDKNEQNFENVDKNDQNLVKNEQNSEKPDKENEKINECLETAIKTLHSTIKKEILDEKLSKLLETSTSNPENNKKLPNFPFSLLPKKIKIENLEKDISIINKLVDSVSRDFEFLRDELREVIKEDSFVERLFGIYSDTFEMDLMRGHPAININRADFFFDEKAQSYFLVEINTISCGYSGISAHMVDFHAFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ6</accession>
    <name>A0ABV2AFQ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PARP-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000281</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="221" mass="25817" checksum="8C045AFEA1E4AE71" modified="2025-10-08" version="1">MDFGLITIALFLAFYYYVLCKMMRKPKTARISESPNDPKEENSLFDSDLCEEKGFKCCICKNKITTLADKEKTKDRIGNKPVAIHGKMYHSYCFEDNFTVIARRTEQTPNATENDFDEPNLYENGCAKVEQKNAPKNKERSSNKKRFVKIVSSNFSQIEKNGPLFKSRAATIDLTAKKDRRKPKPQSTENLNENFRLKKIELERRRMNLRKKFKAENEFDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS8</accession>
    <name>A0ABV2AFS8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000488</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000077">
        <property type="protein sequence ID" value="MES1918528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16448">
        <property type="entry name" value="RING-H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037381">
        <property type="entry name" value="RFWD3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16047:SF7">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RFWD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16047">
        <property type="entry name" value="RFWD3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="3">
        <location>
            <begin position="8"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="97"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="347" mass="40921" checksum="BE596710E3C3037F" modified="2025-10-08" version="1">MSVNLSNCSICLELLEDNICTTRCGHIYHTFCLRSWMLNKRSCPLCKKQVGKKSPVQLYTSPIDIAREIINKNAENGDDEEIKKFEIGFLKTENRNLHRYNKEIKTENGTLRDLLRERNEDLKIKEKSKNELENILIKIQNSNNDKNEILKQKTLKINKLNKEIEQLKNMNNCIQIANEIKGDVFTENFFGPETTFEEKYNVTKISYLYTQSEYKRVNNQLRELRHILENKESDFKEQISNLKYKNSLLKSSLLSKQLKLNEKKLDLESSLRESIVKENSKLDIGDLRKDDTKSDSKFSDSNFFDGKFYSQTFFYQQKHFRKKRGLFKQNKAADDYQTEVSSFFSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG12</accession>
    <name>A0ABV2AG12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000576</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000098">
        <property type="protein sequence ID" value="MES1918635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="185"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="265" mass="30858" checksum="778073553088473B" modified="2025-10-08" version="1">MSWNFRSANGSHFLRSICFIIQISENKEKSEKFFENIDKSTMRKRFLRSMNINSENLANGKIRSQLHQKLKNFYAGLYENQKVATNEMLKAMPNFNLDKISEQTQENIFDLKNVTSGLEEKIESKIEKIKMVDFFEDAKYSRDDLTHEAKDFLKLIYGDFGGPGKNGLSEKEIDEWSATEDMSFGEEMDSSVEGENVMSEISGERNDREETEDEFFTTKMDKDLKERMVRDLKERNKNVQGCENRAVFSDYDTGILIARKSVEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG36</accession>
    <name>A0ABV2AG36_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000587</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000100">
        <property type="protein sequence ID" value="MES1918649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357134" evidence="2">
        <location>
            <begin position="20"/>
            <end position="972"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="945"/>
            <end position="968"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="972" mass="113009" checksum="C404354CC9F8F30C" modified="2025-10-08" version="1">MLFLIYLLFGTVILENCTLWNVDNFVFENYDKNLKNYGFKSGIYKDGEDRRGKMVVSCKKGSEFVSIGKKFLNEYFIGEFVNNGFKIVEQKHVNVKEICCREVSEKHTCSLEYNGYANIGIPAPKFLNHGKCQTFKDSRNSTNEKYFCCIENVLRESICEKSKVFVKTLKNESRIESDLMRIGDICKTTKITEYWDDILKIEVNFIKIERFNVCPYSNNDQFYLNTLHRNNNVYSVLSSDMLLVNIKIGRFPSNLFYLKNDDICKFKCSLLQCEKDNKTIELNKISNQNINCSKKSGKLSENFACQNKSCMINEYLFNYQEVETGKMSLLNCKRNFIGVRAKSKWSFFPKINVTCNNDLIKMVSELGETIVDEIDCFDLSDYERCPSDRINKDLPDFVSCKTTKKFKRIYSLCSHLSPVLYFRKCRDVLEYGCNMHEDNFNEFYCQNDQKIKISCGYKKTISKESYHKKLCDSKCDMSKEFSDSLQIDEKIGCKDGELVKGISGRYYFGIELICQNTKWNIHVDNKKVDILADEHCSKFKLKSCNSFRFFDKSFRYEIYCGNETLYVECYVTKTFGYGPLEKLLDKICKLSLNFCTINHHYHNNTVSKQYLIFKKSTKIQKYREDVFIASNNKLKINLECHTGTFVLPHGTNITKNSDIAKLCESMCLFKTSEQLNIDFIESGSTETVRCLDKKFVKIEEKYFDSVALLCHERSLINKFMHTYLPTIGCERVDVATCRHFSKDSISDYHYNCSNDNGKIIKLNFFCEDKLYEKIRNVEWKRKVLVACRSCNILNGKFVLKGRAGSTKKYVKEGTHDVECKNSMKDWLAKEEFLYPNLTIKCSNSHLAHHNFFCERVDTGCNISKVISGGQIISSGPKDGTILRNRIGIFVVCPNKRKLHILCKRSKIFYKLAERIQIYKSYEEKTKICDFNSGDKRPDNVKIPSLYLVLPIYSCLLLLVIATSAFACYKNRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG79</accession>
    <name>A0ABV2AG79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LisH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000439</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000068">
        <property type="protein sequence ID" value="MES1918474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006594">
        <property type="entry name" value="LisH"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50896">
        <property type="entry name" value="LISH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="123"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="226" mass="26261" checksum="26E087735BD8C05D" modified="2025-10-08" version="1">MKQIPKKIGLPETCILVQNFLRTYGFRKSAEMFSEESLSHQNKVVYKKEKKVKDLIDIINHYLCINVQEDVKTEIKNLTQKLQFLLHNYSSFRYSHKDSANLENFAISNKNAENNEENSKKDLKIKKRRKTTSPKKRHLKQNAKDHIKSSLLDRMITNEDFAVGLADAINKTKFENTLDDENPIDFDNLSFSQDYYGKVFNAMTEDQRIQKTLGGIVNVTSKGKFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB1</accession>
    <name>A0ABV2AGB1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="3">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000625</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PPP phosphatase family. PP-5 (PP-T) subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000108">
        <property type="protein sequence ID" value="MES1918700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013235">
        <property type="entry name" value="PPP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051134">
        <property type="entry name" value="PPP_phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45668">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45668:SF5">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08321">
        <property type="entry name" value="PPP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13414">
        <property type="entry name" value="TPR_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0464">Manganese</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="8">
        <location>
            <begin position="15"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="8">
        <location>
            <begin position="81"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="PPP" evidence="10">
        <location>
            <begin position="122"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="Calcineurin-like phosphoesterase" evidence="9">
        <location>
            <begin position="219"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="282" mass="32867" checksum="92C159C24C5BDB93" modified="2025-10-08" version="1">MANRQISENYEMKTDEEYKQIGNDLFKQNKLNEALEQYLEAIKINPENGCVYSNIALVYIRLEKYGQAVIEATKSVKFGYNKGYYRRASAYLAMANFDKAAKDFRIASKLFPSNFGIKNKLAFCNAEIRKAIFTDSIKNENNIPLSERLDLDKFVVPDDFSGLKLNFPLNRETVLEIKSNLKQQKRIHIRFVYQIILKTIEILKSEQNLVKSSIPKEAKFNVCGDVHGQFYDLVNIFEIFGEPSKNNIFLFNGDVVDRFLKMLIFLRRKIKIWLLKIKNDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB5</accession>
    <name>A0ABV2AGB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">U3 small nucleolar RNA-associated protein 20 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000458</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000071">
        <property type="protein sequence ID" value="MES1918494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052575">
        <property type="entry name" value="SSU_processome_comp_20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046523">
        <property type="entry name" value="UTP20_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17695">
        <property type="entry name" value="SMALL SUBUNIT PROCESSOME COMPONENT 20 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17695:SF11">
        <property type="entry name" value="SMALL SUBUNIT PROCESSOME COMPONENT 20 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20416">
        <property type="entry name" value="UTP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="U3 small nucleolar RNA-associated protein 20" evidence="1">
        <location>
            <begin position="1"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12756" checksum="3C5E7DE5F4F71467" modified="2025-10-08" version="1">MKKVLLKGYQKHVLGYSLNSLLSSILEWAEKGSLDDFAPNLVQILLEDIFGRPSEDRSVEKIKYSMKEASSEKSFDSFRILAKMVNFRQSEKGLNLILDNVQKTFFKKCFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB6</accession>
    <name>A0ABV2AGB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000619</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000107">
        <property type="protein sequence ID" value="MES1918692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101447">
        <property type="entry name" value="Formin homology 2 domain (FH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="306"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="463"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="312"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="322"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="370"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="399"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="463"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="486"/>
            <end position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="618" mass="71041" checksum="E548B069A75C9CF3" modified="2025-10-08" version="1">MNKNSQFAELLNSHLENCEIERNQTDITEKTDIVTDVNKQEDVNNQIKVNNNIHLIQSGEDKYHSINLNTENKTTADVPVSSNQKNELNGLVNSNSDHDQQETISIDNDYEQNFQFFPRNQSNYSQWEDDVLMRQRENTISGRNIDESARNHFPTFQIEAQKIDATASDINTTDTPPINPSEAWNNCDEIQQTFAKEFVATTCQQRQKESLESDESPKNGHFKNINDVDLIRFDDDVDQTKGNNCYSSSNQNRIVEEISQIDENTRPSIEILSLPNKNTTDKRLCEKENKCIENLDMRLMKQINKVERNENNNDQTQIDSNQTEKNEEKEPVIKRTNNKHVRTIIQPLPPPPSSPQLKSESEVSQNLALSPPPPPPPPPPPPSPIPYLKSGLKVAQGTPEKKSLENKEFDVAKDTNSAVKDDENMNSDKNDDADSGEAEFNSFRFQNFNIKGLKFRKESIIRSIENHELNKKDKKDETDKTDKNAKQQTANNQNLKTVIESSDDESEDKVNCLFYDSDTDGFFRKDLHKEANNENDYKAEEELEWETSPDLNNTAHSGIERMDVTQLSKCFINNIKESRNKYKRKVKIIKPGRIDFNKKKFDALKKKFGVSKKEDAKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF6</accession>
    <name>A0ABV2AGF6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pyrroline-5-carboxylate reductase</fullName>
            <ecNumber evidence="4">1.5.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000678</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-proline + NADP(+) = (S)-1-pyrroline-5-carboxylate + NADPH + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:14109"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17388"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="EC" id="1.5.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-proline biosynthesis; L-proline from L-glutamate 5-semialdehyde: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the pyrroline-5-carboxylate reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.2" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3730.10">
        <property type="entry name" value="ProC C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01925">
        <property type="entry name" value="P5C_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028939">
        <property type="entry name" value="P5C_Rdtase_cat_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053790">
        <property type="entry name" value="P5CR-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029036">
        <property type="entry name" value="P5CR_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000304">
        <property type="entry name" value="Pyrroline-COOH_reductase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00112">
        <property type="entry name" value="proC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11645">
        <property type="entry name" value="PYRROLINE-5-CARBOXYLATE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11645:SF0">
        <property type="entry name" value="PYRROLINE-5-CARBOXYLATE REDUCTASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03807">
        <property type="entry name" value="F420_oxidored"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14748">
        <property type="entry name" value="P5CR_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000193">
        <property type="entry name" value="Pyrrol-5-carb_rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="6-phosphogluconate dehydrogenase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00521">
        <property type="entry name" value="P5CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 4" id="KW-0521">NADP</keyword>
    <keyword evidence="3 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0641">Proline biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyrroline-5-carboxylate reductase catalytic N-terminal" evidence="5">
        <location>
            <begin position="18"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="Pyrroline-5-carboxylate reductase dimerisation" evidence="6">
        <location>
            <begin position="177"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF14748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="30114" checksum="425A51786513C807" modified="2025-10-08" version="1">MSIPKKQNVEKRARKMSVAFIGARVMGPAMAAALINKSVFAETKMVLCNTDSEITSGLRSKFPKSKITTDACEAVEGADLVVLCVPPKGYRKTLKAIEKSLNPTQLVISVLAGIKLDDIQEIIPTSPVTRVMPNITATVNEMASGFAFGRRMESDDQKELVRYVLNSIGTAFEVKEPLLGAVTGVSGSSPAFVLMMIEALADGGLLHGLPKDVGLKLAAQAVMGAAKMALESEVHPAQLRDRITSPGGTTIAGVQSLEDDGFRGAVINAVDSVVERAEELSEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGH6</accession>
    <name>A0ABV2AGH6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000122">
        <property type="protein sequence ID" value="MES1918775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001900">
        <property type="entry name" value="RNase_II/R"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00773">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNB" evidence="1">
        <location>
            <begin position="35"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="251" mass="29086" checksum="747AB50E1E5F62EA" modified="2025-10-08" version="1">MCITGHVGSLFLTKQNVPAPYRVLPINDFKERLQNIRISRISLLRSLECAKINSKPHLKSEKAHSPMALSEYVQVTSPIRRIMDLLAHYQIRSAILEQRPPISKEFMTFLGNAAVESFQMSKRLQTSRNNFIILKNIQKKLEKEGPFRTKCDVIKVNSTNFEFEKINFFQKDYRKNFKEGTATVIIKEAYPSKGALNFEVISTKPYEGKDLDCNEVVSRYRLVLYSKQVFGIENVKSDYFNLKTDLEDMTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGL4</accession>
    <name>A0ABV2AGL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">18S rRNA pseudouridine methyltransferase</fullName>
            <ecNumber evidence="9">2.1.1.260</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">EMG1</name>
        <name evidence="9" type="ORF">MHBO_000730</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase NEP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.260" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000135">
        <property type="protein sequence ID" value="MES1918830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18088">
        <property type="entry name" value="Nep1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005304">
        <property type="entry name" value="Rbsml_bgen_MeTrfase_EMG1/NEP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12636">
        <property type="entry name" value="NEP1/MRA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12636:SF5">
        <property type="entry name" value="RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE NEP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03587">
        <property type="entry name" value="EMG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="alpha/beta knot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="25003" checksum="5F7181F616A42A2E" modified="2025-10-08" version="1">MTKTHKITKMGKAPKPPKIHILLLNASLETLKTKNGFELLDCDAHRSILLKLKKDPNLFRPDIVHQCLLTLLDSPLNKSEKISIFVSTQKNVLIKINSKTRLPRTFRRFSGLMAQLLHKRKIRAAENKEVKLIQIIKNPITNHLPTNCLKIGTAMSGKLVKLSEFLPSLPRNSPVLWTIGAMAHGEARADFEEKSVSLSEFALSAATALSRICCSYEEFLGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGP6</accession>
    <name>A0ABV2AGP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000571</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000097">
        <property type="protein sequence ID" value="MES1918629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="243"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="282" mass="33309" checksum="067DF73E5D8632ED" modified="2025-10-08" version="1">MGEILAQEPHFSLQKKDIFRRIETMTPEKFKNWALYESVKKENATKDKIKNCDNDDTIKDGEEDKIKDGEKDKIKDGEKDKIKDEEDKDDDKNVDKKIKNDYKKIKNDDRNGAKDESFSKEDNEDDESDSENSKKAAIPPRRSLRKTPTRLLKAQMELLNKRKSAFFYESGKRRMPCFADEVLEELVSSRRLAVWLKQKEKRNGGKKRVYFATKKSIQWKSLSKSRLRIAPFSRRSKEEDEFFEIKDKNNMSPQEEQKLREQMNKKVSDQVSDNFTNFSLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ1</accession>
    <name>A0ABV2AGQ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">U2 snRNP-associated SURP domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">U2SURP</name>
        <name evidence="7" type="ORF">MHBO_000754</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000141">
        <property type="protein sequence ID" value="MES1918858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.790">
        <property type="entry name" value="Surp module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006569">
        <property type="entry name" value="CID_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008942">
        <property type="entry name" value="ENTH_VHS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051485">
        <property type="entry name" value="SR-CTD_assoc_factor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000061">
        <property type="entry name" value="Surp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035967">
        <property type="entry name" value="SWAP/Surp_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23140">
        <property type="entry name" value="RNA PROCESSING PROTEIN LD23810P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23140:SF0">
        <property type="entry name" value="U2 SNRNP-ASSOCIATED SURP MOTIF-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04818">
        <property type="entry name" value="CID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01805">
        <property type="entry name" value="Surp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00582">
        <property type="entry name" value="RPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00648">
        <property type="entry name" value="SWAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48464">
        <property type="entry name" value="ENTH/VHS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109905">
        <property type="entry name" value="Surp module (SWAP domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51391">
        <property type="entry name" value="CID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50128">
        <property type="entry name" value="SURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="42"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="SURP motif" evidence="5">
        <location>
            <begin position="162"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="CID" evidence="6">
        <location>
            <begin position="269"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="237"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="240"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="444" mass="51347" checksum="9A6C5EF8BB244475" modified="2025-10-08" version="1">MDLMSHLFVNYGRNAISRKKEQKNQNFLRIEKSFEQSDPQTKNVLISNLPDDLSEQELAIEMSKFGPVGTVRIFVESINGKTINNAFVNFMWRDDARNAINALNDQILFDKIVTLSMEKVLPPVWYPIQFGKKEATVVDIDQLKNVEMRTVEMIKDDKTRRLIDAVATFVSKEGYLFEKHFIEIHAEDPNFDFITETKTPKNLYYRWRVYSLSQGDSLDDWSLKPFRIIENGPLWIPPSKNRQNTSSNTKSTQKPITKFERKKSITKFMKENKRDELDQILSNLDKDRYSIREAMGFCIDNSEHAIEIADTITESLIVEETDVNKRISRLYLVSDILHNSDSSVRNSSAYRSEFQRNLEEIFAGLHSGYSKIDGRITAEKMKEDVLTVLNVWQAWSLFPVTLLNSLEATFLSVPKEETVLGVNKEENEDIDGVPLEEDIDGFQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV0</accession>
    <name>A0ABV2AGV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RecF/RecN/SMC N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000566</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000096">
        <property type="protein sequence ID" value="MES1918623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937:SF12">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0498">Mitosis</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RecF/RecN/SMC N-terminal" evidence="6">
        <location>
            <begin position="3"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="17090" checksum="8B6863276A4EFB5B" modified="2025-10-08" version="1">MGIKSLILNNWKSYNGQTSIPIKQFAAIIGPNGCGKSNLLDAICFALGVNSAKLRGKKMQDQIHKLADGTSAKFASVEIIFEKSAEKDLILSGIVSFKRTVNALGNSSFEFENKTVSKKNYFEKVFSSNSVGANRDSEAQQEFSCFPGRHRFDRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH28</accession>
    <name>A0ABV2AH28_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000084">
        <property type="protein sequence ID" value="MES1918562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="52" mass="6011" checksum="4FB9ABB22E21B7F9" modified="2025-10-08" version="1">MVSNKFRSHKYEKTKKSIFSTDLIGNVGATEPSRFNKNPNQRKHAQLKTLHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHI4</accession>
    <name>A0ABV2AHI4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000207">
        <property type="protein sequence ID" value="MES1919136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="74" mass="8887" checksum="621DB23A3AE6A015" modified="2025-10-08" version="1">MNAFYGDLRLHGKDILDYIERGYDVFTRMRSLLSIWQSRMFILFDWQPPTRCGSQWCRANIHGAICFRFNPVVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL9</accession>
    <name>A0ABV2AHL9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein L9 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000853</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bL9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000168">
        <property type="protein sequence ID" value="MES1918969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.5.10">
        <property type="entry name" value="Ribosomal protein L9, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000244">
        <property type="entry name" value="Ribosomal_bL9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009027">
        <property type="entry name" value="Ribosomal_bL9/RNase_H1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020070">
        <property type="entry name" value="Ribosomal_bL9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036935">
        <property type="entry name" value="Ribosomal_bL9_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21368">
        <property type="entry name" value="50S RIBOSOMAL PROTEIN L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01281">
        <property type="entry name" value="Ribosomal_L9_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55658">
        <property type="entry name" value="L9 N-domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal protein L9" evidence="4">
        <location>
            <begin position="30"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22065" checksum="BD1B866E4AD67495" modified="2025-10-08" version="1">MFKFSTKLIPFYSCKNIVNPNKHHFAKRTIKVVCVEDIPNFGNKGLVRTCKPGALRNWLRPQKLAAIATKENIDTYYDPKAEKINSLKKEKKAEQKRVKRMSKTVLKIYRPHSNRILDQKITEGDISALMFKHFSVILDPEKIEIKDHEIIEKLGNYDFYADHEGNRVKMHILIEPIKIIEKEKFEID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHV1</accession>
    <name>A0ABV2AHV1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptidase M24 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001123</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M24B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="entry name" value="Creatinase/methionine aminopeptidase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001131">
        <property type="entry name" value="Peptidase_M24B_aminopep-P_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050422">
        <property type="entry name" value="X-Pro_aminopeptidase_P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763">
        <property type="entry name" value="XAA-PRO AMINOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763:SF6">
        <property type="entry name" value="XAA-PRO AMINOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="Creatinase/aminopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00491">
        <property type="entry name" value="PROLINE_PEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M24" evidence="4">
        <location>
            <begin position="3"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="10592" checksum="FBFF9FD0BC726A30" modified="2025-10-08" version="1">MHFERPTEEEVRQFTLVLKGHIALARAVFPEGLSGSMLDVLARQHLWKRGQNYGHGTGHGVGSFLNVHEGPQSISVSKKPSIGLKAGMVLSNGNIFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHY4</accession>
    <name>A0ABV2AHY4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001149</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000249">
        <property type="protein sequence ID" value="MES1919294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052462">
        <property type="entry name" value="SLIRP/GR-RBP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48027">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="104"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="197"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="198"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="232"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="27861" checksum="3B9C968261F51700" modified="2025-10-08" version="1">MESTVGNKEMPKTQNNQNSQNTAKDQLNKKSLSISKNKPEKQNAPAITAKNATSIVSENIVDDLFFLASDVEKSEFMRRSALEFPNSQSLKVLISKLDRNPDLRKIYVKTFGLKKEAEEDLKTAFSRFGSVSNVKIVINQQTGELRGYAFVGFESVLSALNALEQRHVTVKGITTVNSTFKRNTLKQFPGRDFDGGFAQNQRAPNMQNNMSGPGGHPNPYFGGQWNGDQRAFGQSGNFGQGFNSQSQSGPRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI45</accession>
    <name>A0ABV2AI45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001201</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000264">
        <property type="protein sequence ID" value="MES1919354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.20">
        <property type="entry name" value="Alba-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036882">
        <property type="entry name" value="Alba-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007347">
        <property type="entry name" value="SpoVS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04232">
        <property type="entry name" value="SpoVS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="13531" checksum="9F56704C867E1743" modified="2025-10-08" version="1">MGGLRFVVIKDAQNLYRETDFVQNNEMIKISKHSKVPKIAKLFIHYLLKTGSLTMGSMGSTSVFQGIKSIILAGKQLQKMGLEISFQPRFVSLQIGDAGNEKRSVLKIEVKIEKSYCHRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI87</accession>
    <name>A0ABV2AI87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DNA replication ATP-dependent helicase/nuclease</fullName>
            <ecNumber evidence="11">3.1.-.-</ecNumber>
            <ecNumber evidence="11">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">dna2</name>
        <name evidence="16" type="ORF">MHBO_000955</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Key enzyme involved in DNA replication and DNA repair. Involved in Okazaki fragments processing by cleaving long flaps that escape FEN1: flaps that are longer than 27 nucleotides are coated by replication protein A complex (RPA), leading to recruit DNA2 which cleaves the flap until it is too short to bind RPA and becomes a substrate for FEN1. Also involved in 5'-end resection of DNA during double-strand break (DSB) repair by mediating the cleavage of 5'-ssDNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="11">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the DNA2/NAM7 helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="11"/>
    <dbReference type="EC" id="3.6.4.12" evidence="11"/>
    <dbReference type="EMBL" id="JBDODL010000195">
        <property type="protein sequence ID" value="MES1919088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045055">
        <property type="entry name" value="DNA2/NAM7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041679">
        <property type="entry name" value="DNA2/NAM7-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041677">
        <property type="entry name" value="DNA2/NAM7_AAA_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014808">
        <property type="entry name" value="DNA_replication_fac_Dna2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887:SF433">
        <property type="entry name" value="DNA REPLICATION ATP-DEPENDENT HELICASE_NUCLEASE DNA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887">
        <property type="entry name" value="DNA2/NAM7 HELICASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13086">
        <property type="entry name" value="AAA_11"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13087">
        <property type="entry name" value="AAA_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08696">
        <property type="entry name" value="Dna2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0158">Chromosome</keyword>
    <keyword evidence="3 11" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="16" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5 11" id="KW-0347">Helicase</keyword>
    <keyword evidence="4 11 16" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 11" id="KW-0408">Iron</keyword>
    <keyword evidence="8 11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="11" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA replication factor Dna2 N-terminal" evidence="13">
        <location>
            <begin position="115"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="DNA2/NAM7 helicase helicase" evidence="14">
        <location>
            <begin position="451"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="domain" description="DNA2/NAM7 helicase helicase" evidence="14">
        <location>
            <begin position="542"/>
            <end position="622"/>
        </location>
    </feature>
    <feature type="domain" description="DNA2/NAM7 helicase-like C-terminal" evidence="15">
        <location>
            <begin position="630"/>
            <end position="770"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="33"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="8"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU367041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF13086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF13087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1919088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="777" mass="88090" checksum="A70406E657DA88E6" modified="2025-10-08" version="1">MGADKESSSQADRFSQTISQNMDEFEDIFSSVPETAEFSQTDPKIGEAAEHKNKKRKNNNKTAPFADQTTHFNNKAIDKQLRILKIRYYTITDVRISSQNMAEQLEITVKDRNSESSATEKLFLRENWVDAIFAKGDKLNLVSIGDGPTQNYNCVDNSSPSFAVLHPDLLINSTSISTSFDCVRKTIVSETYKNYGMTNKNALLGCLAHELFQQCLENKVFTKSFVLRSLEAVITRNRIDLFSQNINREEANAFLRKYVDRIAKWGPFYFRESPIKNNLCIGDVYDIEELILSPNFGVKAKLDASVQIHHNTRNRGNCVEKTKLLGPLEIKSDQLKNFDETTIQKISKGDKVVINIQNGPVCVGTGTVIKRRDDYVEVMSENRINEKILNRFQHKNFEICLSENRGAFSYLQNVLLSIFVNDSFHERKRKLIDRKVESLLKKLDLFGDFAKLNFSQQNAVTKSLEVEDYCLIFGMPGTGKSTTITFLLQLLNKLKKKVLVATYTHSALTHLLLKLAAKKVPFVYAGKMTPQCDSVVAENHIRAISDRCDKDQTFYRRIENNFIFAATSLSTGSSFLQSQNFDYCIIDEASQMSEIACLGGLRLADKFILVGDHFQLSPLVRSDAAKRAGMEISLFERLFAEHKTSTIALTSQYRMNSDILKLPNNLFYQNKLFCGSEKVKTAVLSVVASETKTALLPKWLKSVLSPKNSLIFLNTDKMEAIERREKNSDREIIINKGELVVIEKILDLFESAGLAKSQISVLSTYKSQTTVFILTRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI99</accession>
    <name>A0ABV2AI99_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Zinc-finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001236</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000277">
        <property type="protein sequence ID" value="MES1919397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="142" mass="16680" checksum="6A4DAFB2A8D38F01" modified="2025-10-08" version="1" fragment="single">GQRVLFSNYKCCHKKFCDLCLHRYMEIGDVIKKMEEQRKFKAGIRNTFVWICPACKNICSCASCKRKRYGHSQFYSNRTNTFFNVSEPVTATESIPLNIITNEKQTDFEIDMALNRAMEMNFKGLFKTENGKFKLIEDIFMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF2</accession>
    <name>A0ABV2AIF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Zinc finger and BTB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ZBTB5</name>
        <name evidence="8" type="ORF">MHBO_001286</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000294">
        <property type="protein sequence ID" value="MES1919456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24393:SF34">
        <property type="entry name" value="PR_SET DOMAIN 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24393">
        <property type="entry name" value="ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13465">
        <property type="entry name" value="zf-H2C2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="50"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="78"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="106"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="134"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="163"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="22574" checksum="B304E1D9F5D5814C" modified="2025-10-08" version="1">MTDNKLEKNVFQSFRRLSVLAHVTKRFGSNVVMERSKHDITVLKNIKNCCFCKFCCKVFAKLPDLNRHLRTHTGERPYECDVCSKAFSDKRNLMHHNQVHTKSRPFVCDACDKAFARMSHLKLHFKTHESEGLYRCEMCLKRLDTKEELRLHRERHEAGNGAYRCRHCKVYYRLYHSFQQHLKTAHGTED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIJ8</accession>
    <name>A0ABV2AIJ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001321</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000309">
        <property type="protein sequence ID" value="MES1919501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="17629" checksum="5207FAEFE5A9188F" modified="2025-10-08" version="1" fragment="single">VIVNGEIEDPVSGIIVENVPFNLTLQTIGDWFNSNIQTKMGTQKEMIKNVSNPPQLKNSILVILNEHSAMSAALSLNGSIFGNFRINVFPAPKELISNFLIDNQQNISGKSPIKINTKFNQKSQNWDKKILKMAGQIGGPLETPSLIAIYPKIENRDIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK2</accession>
    <name>A0ABV2AIK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">serine C-palmitoyltransferase</fullName>
            <ecNumber evidence="5">2.3.1.50</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_001322</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; sphingolipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Sphingolipid metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.50" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000310">
        <property type="protein sequence ID" value="MES1919502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050087">
        <property type="entry name" value="AON_synthase_class-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693">
        <property type="entry name" value="CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693:SF2">
        <property type="entry name" value="SERINE PALMITOYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0746">Sphingolipid metabolism</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="43"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="12">
        <location>
            <begin position="138"/>
            <end position="487"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="494" mass="56643" checksum="BEBDF2A56FA2DA8B" modified="2025-10-08" version="1">MKNFFTKAIRKILTDFKLHDHFFVAVAQKWAKKLAYAFWRDKYHVFVEVFLLVFIVSYFFIEKPFKAKKPKELSEQEKEKLIEEWVPEPLIKKSPRFDDIVPPLFLESAVSTVVTIEEKKYSNFASPDFLNIANRPELKETACRIVRKYAVGSCGPRGFYGSTDVHLSLEKKISALYGSKNCVIYSDTIGCVSSVIAAFSKKRDIILCDSACNFFIKHGVKISHSESFFYEHNNMQSLEKLMIAVKKQDETTKRPLTRRFIVAEGVFRDRADILDLRKLLELKRKYHYRLILDDSFAVGVLGLRGSLDYLKIPLSEIEIYCSSLNFAFGSVCSFCVGDEDVSNYQRLGSAGYCFSASAPPFTAGASSTAIDIVTIEQWRINKLNQITKYFWSKINSLKSNLELHKFEILGEHPVPFCHLRQKNGGKEENENFLMLAKIVKSLRNFGILVEFSRPNCIDGYPSKRGSIRINVNCEHSVEQIDFLANSIKKILNTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR8</accession>
    <name>A0ABV2AIR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000330">
        <property type="protein sequence ID" value="MES1919578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14825" checksum="376E93BDABBC38C4" modified="2025-10-08" version="1">MQNFINNPLLQNFLTLFRQSYKNKFLVFKMKKGERSRDLNPHKKQKHISLLSVIIIFSLMPLYNMSIFDGMRESVDKMKDSIEEKVDNIKTYSRDKFVRSKEYYISLKEDANEAYTKTKKWLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIV0</accession>
    <name>A0ABV2AIV0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001406</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000338">
        <property type="protein sequence ID" value="MES1919606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13315" checksum="28553DCFD188E883" modified="2025-10-08" version="1">MIFYFLKNFLLFEISRKIKKSRKSIRTFRNSPLKSQPSNRDLRKLAQFNEKNILLKRVLRILLTCEPRKLPKPLDVEFFRKLQTKKSPSHSAKHKKNFEGKKIEAMVWSPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ73</accession>
    <name>A0ABV2AJ73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001351</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000320">
        <property type="protein sequence ID" value="MES1919539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14120" checksum="5FDFBAAE5C0C012B" modified="2025-10-08" version="1">MLNDVQGLSLTVILKKIQIRITDLNYIMLELVEIVLKINKRNYFLCDLSTDKIFLCTDGTVSMPNLSDCVKLAVVMKPELFYVAKVIRSIVSKSGYNDLLSAAIHIEENRNEPNYFENLHRIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJD1</accession>
    <name>A0ABV2AJD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Zinc resistance conferring protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ZRC1</name>
        <name evidence="11" type="ORF">MHBO_001543</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000394">
        <property type="protein sequence ID" value="MES1919770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="entry name" value="Cation efflux protein transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027470">
        <property type="entry name" value="Cation_efflux_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036837">
        <property type="entry name" value="Cation_efflux_CTD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058533">
        <property type="entry name" value="Cation_efflux_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45820">
        <property type="entry name" value="FI23527P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45820:SF4">
        <property type="entry name" value="ZINC TRANSPORTER 63C, ISOFORM F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16916">
        <property type="entry name" value="ZT_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160240">
        <property type="entry name" value="Cation efflux protein cytoplasmic domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="Cation efflux protein transmembrane domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="103"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="147"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="Cation efflux protein transmembrane" evidence="9">
        <location>
            <begin position="2"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="Cation efflux protein cytoplasmic" evidence="10">
        <location>
            <begin position="220"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF16916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="315" mass="34961" checksum="1444F78089B08F28" modified="2025-10-08" version="1">MLILIISFFFVELIFGALYDFLVLVADAMHMLTDAIALVIGLYAFIKSKKVRTDKATFGFVRMEVVGGLVNGCFLMVIAFDIFREAITLLLKNEVNKDLVENSGVLLIIGGIGLGVNIIGLIVFGFDHGHGHSDDNSEKKKNFNIQAVFLHVLGDALGSVAVIVSCLVIRYSTWERRTIIDPICSMIISVIIFATSIPVVRGTVRVLLEKVPTTVDLYLLKRKLLAIDGIKNIHELHVWQLNSNKTLATCHVILDKSKNFKRLNDDIQKVFHGCGVHSTTIQPEFQSGSKDCFDIVCGSTRCIEELCCEKIESDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF5</accession>
    <name>A0ABV2AJF5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PWI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001567</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000404">
        <property type="protein sequence ID" value="MES1919802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="246" mass="28752" checksum="190347466408CF86" modified="2025-10-08" version="1" fragment="single">MDYLDIDCNTPKVKNLHSQIKKKLSELLKTEEQKVDDNLLMYSLLLFENRHTKESIISGLNTFFPDNSSAPFVDWLWKVLEPISEEQKRPNFDSKKLSDKHISITKPVSNPKKTIAKKSIKAQKNKIPFGKQNFEQKRKIEKNQNFEQKQKKKIMEQLLKMKSSEKKNIFVETVKNSKENKSIDENPDTAESKKIPNSFKKAMDNLKFKDEKINKHLIAKNKNLARAESAVRCHFWPKCQKGGYLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT3</accession>
    <name>A0ABV2AJT3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001667</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000445">
        <property type="protein sequence ID" value="MES1919924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050149">
        <property type="entry name" value="Collagen_superfamily"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023:SF1112">
        <property type="entry name" value="COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24023">
        <property type="entry name" value="COLLAGEN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="23"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="132"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="18218" checksum="95ED5C1321AE6580" modified="2025-10-08" version="1">MDQKNYHRYHSNKYYLPGPPGEPGIEGLPGKPGCRGRTGPPGEIGYTGDAGRKGCKGLTGRVGCIGILGPEGEPGICGPKGIKGEKGEGGPPGVKGLKGPPGPRGVTVVGPPGHIGAEGQTGLPGKKGETGLPGPETKGLPGEPGPEGPAGNIGAPGPVGPPAPILPPIPGPPGPPGPPGPPGPPGPPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKE8</accession>
    <name>A0ABV2AKE8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001621</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000428">
        <property type="protein sequence ID" value="MES1919868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="387" mass="43913" checksum="52F799BEFF452671" modified="2025-10-08" version="1">MLSRKFDSATLISLSGIVNSISDKSLSCIDENSANSFREAARSIFSFAAGEDLLKALASSIEKLSKSEISAANSFERFYGELAKEAETNLRKTNLFSGELKFLEEAVSETKRLLALQSQKNVLSDKIWAQIAKLLASFGELWANSKVSSQTRNLERIGKDFLKIAALSLFWDFVGDERNRKRKAPEKTSGKDDNLGKEDNYFSEAKLRNEKKQRISQISKLFQNILDSENCRSLSSTVLKCFGDLCSISDVFLNRDEELNTKICDFFIRFADERVIDGEEADFEKEDIFAACKLVLIDALKFKPILFKLIQIYRISEKELKFILRASISKAISANRRAIGEIVQKYVDERKPVYLQFMEAKERAVLQKLVKNGETDSKVIVEAVFEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG3</accession>
    <name>A0ABV2AKG3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phage protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000433">
        <property type="protein sequence ID" value="MES1919883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="60" mass="7485" checksum="3B853A18CB48883F" modified="2025-10-08" version="1">MLNKRNSISKIKKEDYPEMDDYEFCNMIARKEEKSENFDWKKRFARLIKDRKKELRLAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKK2</accession>
    <name>A0ABV2AKK2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UDENN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001882</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000541">
        <property type="protein sequence ID" value="MES1920185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052809">
        <property type="entry name" value="Actin_polarity_regulatory"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28245">
        <property type="entry name" value="ARF3-INTERACTING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28245:SF1">
        <property type="entry name" value="ARF3-INTERACTING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08616">
        <property type="entry name" value="SPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="436" mass="50759" checksum="A9B91A7C078E82CA" modified="2025-10-08" version="1">MKLTRAIHFVSLAEFDVEHGSVLRHQYPFQLKSKDEKCHQRNEDGTYFTLEFENPVGCGDEIAKIHKAQMDFEINCFETEAKVESLKFPNENCSIKIEREDFYFVKICGKNHNEKIRIDEKTELKKEFLLVRLDETKFLFSVENDWIKFYLIVNKIKSDLADKSLDDHQIEPFRLYFVSIVKEKKSAKFERGSRRYALSIATPFLWFANLKGLLRIAMESIIENDENEQTVLKKLYHAMFLCETPGFLFHKFELNGELFFKWENKMYPINFGSSNRFQAEKIGISVLKKRFGTSLATILIAVLLEKRILFIGFKCPTTQLCRIVLSACLLAMPLNADILSLTFPYVDLFYIDQLKKLKSYIVGSNNPIFEQKEDMWDLVANVEEGTLAKSKDFAANVASTDFQFFAKTVLSKFAYLRMRSESIKNAEKCLCNILEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKK5</accession>
    <name>A0ABV2AKK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001749</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000479">
        <property type="protein sequence ID" value="MES1920019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9646" checksum="633D5D75CAA08CBF" modified="2025-10-08" version="1" fragment="single">MTNRKTQKEIKAENLIYEQVKLLNDKILNKNYSIDKTRKCDLSKGCLYVLPPEKLSLQNRLSKRKKQIEIGKNSSSYKICLTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW6</accession>
    <name>A0ABV2AKW6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002017</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000615">
        <property type="protein sequence ID" value="MES1920336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="224" mass="26229" checksum="ABDC96A1C68EE6FB" modified="2025-10-08" version="1">MMIDYIGSKIKKEWKFELKTNEKNLIKNKFFKPKKSVKGIMNGLKKHSKIENYIKNLTKTKMTNLTEIETANLLNYLTKSSEPILFTKILKKLFMSRKPGDEILKSLFELKNDQISRIVEIAIFLLSNCEDNIFGNKTKNIIAWNNMILTYLIKKNDKTLIKSFSKIKKNIKFRIKLAEDGLKILNLIDFLAKTKFQKNISVSRYSLVEISRSNKFKFSSKNLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALE3</accession>
    <name>A0ABV2ALE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Ribosomal protein S6 kinase alpha-6</fullName>
            <ecNumber evidence="8">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">RPS6KA6</name>
        <name evidence="8" type="ORF">MHBO_001987</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000598">
        <property type="protein sequence ID" value="MES1920304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000961">
        <property type="entry name" value="AGC-kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51285">
        <property type="entry name" value="AGC_KINASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="AGC-kinase C-terminal" evidence="7">
        <location>
            <begin position="145"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1920304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="28706" checksum="3B26ED6CE2818A55" modified="2025-10-08" version="1" fragment="single">MNVTWSFLLCQPRNMLLDADGNMRLCDFGLSYQFKKENEVLKNVAGTDSYNAPEMINKQTYRFSVDIWSMGVCLFEMIFRKRPYKSDENMINCHQKNIELNFPDFIPSSDSVRNLLNRMLQFRPKNRIGCGPNGVKELKEHPWLRSIDWESIRSRKLKPPFVPREEKRGTTMVDKNIFHKDNQKRGNSGFLDSGAQQRFQGFEYNVALHSEDHAMLPPPVRKKNEKRILRTDLSKLFKESLKPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALP7</accession>
    <name>A0ABV2ALP7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">HSF-type DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002046</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the HSF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000634">
        <property type="protein sequence ID" value="MES1920369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000232">
        <property type="entry name" value="HSF_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015:SF427">
        <property type="entry name" value="HEAT SHOCK FACTOR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015">
        <property type="entry name" value="HEAT SHOCK TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00447">
        <property type="entry name" value="HSF_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00415">
        <property type="entry name" value="HSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HSF-type DNA-binding" evidence="5">
        <location>
            <begin position="16"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="181" mass="21793" checksum="2C85254BE0DD953E" modified="2025-10-08" version="1">MENKNNFEMTTPIQRKISPFVTKLHLAINDEKLNFAIKWSNEDKKIIAITTNKLEEILPEHFGINKTQLFKRLLRIYGFEQMNTFNLSENGREFWRNNFFVKYQFPLLRLIKTNIERRKKYFRRGDNLVCVLIKIKGIQKQNRLLKRKYKIAKQMKNLVLEMLSDLSGYTVEDLKTKINKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX2</accession>
    <name>A0ABV2ALX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Kinetochore-associated Ndc80 complex subunit nuf2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">NUF2</name>
        <name evidence="11" type="ORF">MHBO_002165</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
            <location evidence="1">Centromere</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NUF2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000706">
        <property type="protein sequence ID" value="MES1920499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.60">
        <property type="entry name" value="Ncd80 complex, Nuf2 subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005549">
        <property type="entry name" value="Kinetochore_Nuf2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038275">
        <property type="entry name" value="Nuf2_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03800">
        <property type="entry name" value="Nuf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4" id="KW-0132">Cell division</keyword>
    <keyword evidence="8" id="KW-0137">Centromere</keyword>
    <keyword evidence="3" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6 9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0498">Mitosis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinetochore protein Nuf2 N-terminal" evidence="10">
        <location>
            <begin position="7"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="150"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="381"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="461" mass="53912" checksum="40E2AC4EC445B65E" modified="2025-10-08" version="1">MPFKKNLSFPILPENQLIETYNSLSIDTTAILRKPTSQNTRDTYQQIILRLLNCSFEDVFGNNIVTTDDFTNPELHEHSVPYRAFSLIFPKIILYSGIEDFDEIKDIAKPSKRRVIMVLSGLLNLLKFTNALKDFSLQCESETFEISKSLEEAKNRRNLLENDKQKLIKTLENDEGEIKTLEEDITKNEMEIKSFQKELLKFDKIEEVRKKKYLTNKQNFKENKNVLHEKKKRLAKLEQQIVSSPEKIKFKLSDLKSKIDVTKKTVEMNDRKLKKCLEYERMADKLMNKINSRIAECNKIESDLKTIKSLKKKLKKIDFKINETKHKINTVEENKNALVGSQEFQKQRETDLQGEIEQKRKEMISALDSVHKKELSAQKTKAEEDQRVEQIRSKIAATEKRIAEARAREKELLNEADKEITLFKVAVAEFFKKTESSLGDFEARENVWASEIYEREQLSGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX6</accession>
    <name>A0ABV2ALX6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serine/arginine repetitive matrix protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SRRM1</name>
        <name evidence="4" type="ORF">MHBO_002113</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000675">
        <property type="protein sequence ID" value="MES1920444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1390.10">
        <property type="entry name" value="PWI domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002483">
        <property type="entry name" value="PWI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036483">
        <property type="entry name" value="PWI_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052225">
        <property type="entry name" value="Ser/Arg_repetitive_matrix"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23148">
        <property type="entry name" value="SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23148:SF0">
        <property type="entry name" value="SERINE_ARGININE REPETITIVE MATRIX PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01480">
        <property type="entry name" value="PWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00311">
        <property type="entry name" value="PWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101233">
        <property type="entry name" value="PWI domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51025">
        <property type="entry name" value="PWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PWI" evidence="3">
        <location>
            <begin position="26"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22830" checksum="DE396848CFFC8AB5" modified="2025-10-08" version="1">MTTFYKGTTIEQSYLFKDKQKKLKSKMAFPKCFRRKIDIKKVNIDVIAIWIKRKTNDILDFDDDVLNGMIVNMLKEGTDPKEIQIFVTGFLEKKAYDFMKELWKLLIKCSKSESGISKELLEEEKKFFKLKKIDKEEKKKRERREFRDKMDSKTRRRLDQIEAETEKLTERKKKRRYFSEKTISEKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM70</accession>
    <name>A0ABV2AM70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002412</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000858">
        <property type="protein sequence ID" value="MES1920775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11697" checksum="D03885976F7A63CA" modified="2025-10-08" version="1">MSKKTFVMRPNGAVLFEDSFRLALRVIFFNLVNSEHEAAQQTAELITEYDPCVFYSFLSFNTIILILLYTTIGFSVNAVCNKGVFVFVCVYAGGFIFRSRTII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD6</accession>
    <name>A0ABV2AMD6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PDZ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002132</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000686">
        <property type="protein sequence ID" value="MES1920467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="510"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="559"/>
            <end position="572"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="612" mass="67975" checksum="57619A03C0162251" modified="2025-10-08" version="1">MVPCDRVSYTKLDEYGRKVVSLKGIDKKVYPASVMMEDDHYNIAFLRPYDLPQKAKKDAINLKPFENDVKFYKAAPVNTKLVTKYFVDQSGNCKDAAGVISTIRSNAFGLSDHVGLLSFVENQFGEMTPGAALYNENMRFSGMAMGLQQEGFAVLPAPLIEMALYRFKCQRSVDNSLNTQISHLFSNIKCQPVDESTAGLLNVPLGNGVRVSKNIGALKADDVILAVNGQSIDNTGNVKIAIVENDSTLYDIPWGVFSTIVTPEKPNLLLSVRRNGQNLEIKHKCTYNRDMIPKDDVSINNDYLETYGMVVKVVNLAEVVTNLQKNMIGINEMEAFTDDSRRDKDQMALEIDVNNASPHFQEISQLQGKLLYSVNGVPVNSVLDIAVALETPINRGAKNFIEFKSTDDYVLHVENERFRTDEKSSLKKYPNQKFRSQTLQQINCPKCATANPLVSSNRLICRVEKCRQKVADFELTENGVKMNVIRPNAALLGNLPKPKAEFHANEINDGETDKLQKMPPYLGNNGQPGERPAQPEVPQNPGLNGPYGTNPGQTEIPSQNQQPTIPGEQQQQGIPANRIQIIPAQMAKKETKNTNRILKSSKIVFSGTSSMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI2</accession>
    <name>A0ABV2AMI2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002477</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000908">
        <property type="protein sequence ID" value="MES1920853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="22158" checksum="2D30D3C320AA4A35" modified="2025-10-08" version="1">MQTFYVTEKKSKHALTASKSKQPYLEKEVKGYPFLKLISNNSVFDKINLWEHLFYIFGTKNKIKIINVNLFENAVLVIYKKLGLKIVFLDCEIVDTEKTDYKSMLRLFFILLTMIEDCNYDFAYLKQNVFAYLMKEAEVGYEDLIDLTQNFRCQTSFERNSHSFVALTNPYHYFYLLLNFYLFFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI5</accession>
    <name>A0ABV2AMI5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002479</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000910">
        <property type="protein sequence ID" value="MES1920855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="269"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="304" mass="35322" checksum="237F76F9C2D94B04" modified="2025-10-08" version="1">MADLILFVGTNKITSKLNFGIKLSDLTENEKDSNFVVDKNSFKILLHLKYFGIGFRLRSFDKNTFSHLGGYPPFLICERKFVKQSEIIDFVNKRYGINSKTKNAENCKDANFGKLKICVSLLKQKIKKFEELKSQKSLIRKFCSKLNFLNLFSINGNNLQNKNQLILEINYCLNEIAPIYEKMCTENIKILNFDLLKMLVTLMEFDNNGDLFGINQLFENFLNEMKKILRAKLVNRISKVNGADKINMENSKMSLENSSIFKKYGIFKIRYLVFVATAAFMFISLAKNSEKSPEKNRQKYDLFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMS0</accession>
    <name>A0ABV2AMS0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002572</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000987">
        <property type="protein sequence ID" value="MES1920970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052788">
        <property type="entry name" value="RING-type_E3_ligase_ATL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45798:SF97">
        <property type="entry name" value="ALCOHOL-SENSITIVE RING FINGER PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45798">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="51"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12768" checksum="48FCE4378A3EDE8E" modified="2025-10-08" version="1">MEIYRMLYLSIPFVFTMSLIAFVFWQLFKCYNRKKNLKIVPINSLEDEERCPICQDEFKEDEGMTVTKTTCNHHFHSECIKTSLTHNGGCPTCRFDLELDMAPNELNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN30</accession>
    <name>A0ABV2AN30_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein S2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002646</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001050">
        <property type="protein sequence ID" value="MES1921048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01425">
        <property type="entry name" value="RPS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10490">
        <property type="entry name" value="Glucose-6-phosphate isomerase like protein, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001865">
        <property type="entry name" value="Ribosomal_uS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005706">
        <property type="entry name" value="Ribosomal_uS2_bac/mit/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023591">
        <property type="entry name" value="Ribosomal_uS2_flav_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12534">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12534:SF0">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00318">
        <property type="entry name" value="Ribosomal_S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00395">
        <property type="entry name" value="RIBOSOMALS2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52313">
        <property type="entry name" value="Ribosomal protein S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="180" mass="21008" checksum="746527530882E271" modified="2025-10-08" version="1" fragment="single">ALKCGEPFIVHKYHDGILTNFSYLSSKAKERRFFRMDKAENRDIKDVMKKYARYRLSDGIPSIIVLMHKTGNEILINEADRVGIPVACLCDSDVDPSRIMYVIPGNDDNEPSVRYVMEMLSNAILEKKKNIRFWRKLIDIQRKEPKKLYSPNVKPNLSLRKGLTQIEMLNPKIRPKRKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANA9</accession>
    <name>A0ABV2ANA9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Farnesyl diphosphate synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002735</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001118">
        <property type="protein sequence ID" value="MES1921163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039702">
        <property type="entry name" value="FPS1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11525:SF0">
        <property type="entry name" value="FARNESYL PYROPHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11525">
        <property type="entry name" value="FARNESYL-PYROPHOSPHATE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00005">
        <property type="entry name" value="Isoprenoid_Synthase_Type_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01017">
        <property type="entry name" value="Polyprenyl_Transferase_Like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="303" mass="35493" checksum="C28DA3DF0F82C7ED" modified="2025-10-08" version="1">MEPKAFLENYRKQFEDCKNEFLDHFKGDLRLEQKFVDRIERLIDYNCHGGKNNRARSLVRMVKSISENQKKPFNAKLKQKTYVLACCIEILQSSLLVADDIADNSSLRRGKPCWYKCEDIKMDAVNDSYILESLVYFILKKHFSEEPIYVRLVDLHRDVILKTQIGQMIDLSFKGYPKNVKELCQRFSYKNFESIITFKTAYYTYFIPIMDALLLCGMHSKEQENAALKIAIELGKKFQIQDDFIDCYGDPSELGKIGKDIEENKCTWLVVKALEKATEAQKKIILVYRSQIKNRSFFADNFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANG6</accession>
    <name>A0ABV2ANG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="14">ATP-dependent RNA helicase ddx47</fullName>
            <ecNumber evidence="14">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">DDX47</name>
        <name evidence="14" type="ORF">MHBO_002784</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the DEAD box helicase family. DDX47/RRP3 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="14"/>
    <dbReference type="EMBL" id="JBDODL010001167">
        <property type="protein sequence ID" value="MES1921221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd17954">
        <property type="entry name" value="DEADc_DDX47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044765">
        <property type="entry name" value="DDX47/Rrp3_DEADc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050079">
        <property type="entry name" value="DEAD_box_RNA_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959:SF24">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE RHLE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10 14" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 10 14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="13">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="11">
        <location>
            <begin position="33"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="12">
        <location>
            <begin position="215"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="9">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1921221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="396" mass="43941" checksum="DFE8F2F44356BA48" modified="2025-10-08" version="1">MSSFSDLGVAEQLCKACADLGFKEPTEIQKEAIPRALEGRDIIGIAETGSGKTAAFVLPVLQALLAKPAPFFALVLAPTRELAYQIKEQFESLGAQIGVKCTILIGGLDMVSQSMQLAGKPHVIVATPGRILDHLENTKGFTLRSLKYLVFDEADRLLNMDFEKEMTAILRAIPSDRKTYLYSATMTKKVSKLKRACLANPATVEVSRKYQTVKSLRQEYIFVPAKFRDVYTVAIANDFSGKSVMIFTNTIRNTHKLELVLKALDFSVIGLHGKMPQDKRIAALNKFKSGKSAILVATDVASRGLDIPQVDLVLNYDVPQKSKDYIHRVGRTARAGRSGLSIAIVTQYDVELFQRIEQCFNDKISDWLQIERIRGQRRGCDGFFGESRRSAKNGVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANH3</accession>
    <name>A0ABV2ANH3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002652</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001054">
        <property type="protein sequence ID" value="MES1921054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="23436" checksum="6DED547629918135" modified="2025-10-08" version="1">MMAFFFILVNKEKTVKYFKIPQVNILGVNFPIEKEKTHNESVSRQDDLQSNTEVTATNAYTETEGGSCHLDNPVLQTNKVSENPNTEKQTRQELQSSLNLGKTEQRKMPMKTPSKYSLKSLLQTFDNVTFHGERSVQYLTLLDFAGQSAYYACHQIYLSERAFYILVMDMSKDLNAVVGEEVCDHSHTVFETWRYRGIYYDSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM4</accession>
    <name>A0ABV2ANM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001204">
        <property type="protein sequence ID" value="MES1921267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="417" mass="49177" checksum="017A302842815B32" modified="2025-10-08" version="1">MTIFIKNYRNDFLNKLNFHRKQIFFNQKKNFFIKNDISIKQLSFQLSNIELTLQNRKKMTNWLKNQTVQKKVLSAFEQNNELLWRKTIILESLARNLTIHTIDENKRLHKLIEKNFYQYLPTVFGSLLIEKMISISDNKNEFEFWGQMLSKSFKIFNDGYGDNKAIYVYKSFLRKVPEAQQYLEYEKIFNVDAICTSNGSSFFKLSFDKMADTEKIKAVDFLCKNIVKIGNSKNGKYVITHVLNMNFKEFTDILAKNIIDNFEKILFDKDGILIVESLLSHRFYDIEAKIMKNFEKIFSGKKLSLGEIAAILITKKKSFCENICKSNDNKPVIFLKHLNENSLNNFIQNLTVSTKEKMFRNFLKSLENIDTLILDENKVIKKLFKYSDEFKLYLDNNKNSKIEKSLKSLKMGDNKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN8</accession>
    <name>A0ABV2ANN8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002832</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001213">
        <property type="protein sequence ID" value="MES1921282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="25153" checksum="A6C4E3B01013E64F" modified="2025-10-08" version="1" fragment="single">EEIVFKIIVSDGNSFVRCVNKRCQVTEPSVKRNFFVYTNRTRHKEVFVQINDTAVTNAKTILIVDTAKLYSELFYDGLVFVKWFKEMPYYHIGAENEVYSAKFFENRNHRLCLMDARVDDNFLNIKETQRGFMDNITIHCKVGYLTTNYEDKSFVKCVNGLSVVDYPCHRYLDPDINMEVIFSLFATCAMVTLMLIRILSPCLCRKYSNSMYFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR3</accession>
    <name>A0ABV2ANR3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cysteine-rich PDZ-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002848</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001228">
        <property type="protein sequence ID" value="MES1921302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="111" mass="13147" checksum="4E1E243218D41CE1" modified="2025-10-08" version="1">MVCTKCQKKLSTIVVPDTWKEGSRNSEKVSHRGKKPGQTVKLNMLKRSKEFLHKIKKAKFKKEILSHLQALCPPRKILLCFLRLQKWDLFHVWQEDTKHQNLQTNNALKHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS1</accession>
    <name>A0ABV2ANS1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">dihydrofolate reductase</fullName>
            <ecNumber evidence="2">1.5.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002851</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 5,6,7,8-tetrahydrofolate from 7,8-dihydrofolate: step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.3" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001230">
        <property type="protein sequence ID" value="MES1921305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00209">
        <property type="entry name" value="DHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.430.10">
        <property type="entry name" value="Dihydrofolate Reductase, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012259">
        <property type="entry name" value="DHFR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024072">
        <property type="entry name" value="DHFR-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001796">
        <property type="entry name" value="DHFR_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48069">
        <property type="entry name" value="DIHYDROFOLATE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48069:SF3">
        <property type="entry name" value="DIHYDROFOLATE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00186">
        <property type="entry name" value="DHFR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53597">
        <property type="entry name" value="Dihydrofolate reductase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51330">
        <property type="entry name" value="DHFR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHFR" evidence="6">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14871" checksum="A5A2A5F31AC6E015" modified="2025-10-08" version="1">MGRKTWESIPNNVKPLKNRLNIVVSTTLSKKSKGENFTASPSFQHAIKMCQDKEKIEKLFLIGGSGIYETALRHDLCDKLYLTEIDKEFSCDVFFPKWDKSKYKIESKSDFQQENGLNFTYVVYNKCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV8</accession>
    <name>A0ABV2ANV8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">WD40 repeat-containing protein SMU1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">SMU1</name>
        <name evidence="6" type="ORF">MHBO_002891</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus speckle</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001274">
        <property type="protein sequence ID" value="MES1921357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045184">
        <property type="entry name" value="SMU1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22848">
        <property type="entry name" value="WD40 REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23410">
        <property type="entry name" value="Beta-prop_VPS8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="111"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="149"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="192"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="234"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="366"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00026184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="401" mass="44598" checksum="44765368CA28133D" modified="2025-10-08" version="1" fragment="single">ISFRSFQCFFFKQNFLAQFYSTEEEKQLCRKNIADDICDEVYSVESSRLLTLLNQSLKWQQSIGVLPKGSKLDLLRNSSLSERTQREKVITKLDNEIKFGDGDTHAESAVFSPDGQLLATGTTDGFIEIWDFDTAKLNTDLKYQAADELMIHSDAVLCLCFSTDSEKLAVGTKDGQIKIFRVSDGECIHYFKEAHGAGVTSVKFSGDGSQVLSSSLDFTAKIHGVRSGKTLKVFRGHKSFVNDVHFANSNNILTASSDGTMKLWSIKDSSCVHTINSGDKESAIVSICPFPRKNDLFFVCSRSPSVHLIRSNGSVLKSYAAPPRNGVEACFVAIATSSLGKYLYCVDEKNILYCFLVETGKLLHAVKTHEKGVLGIRHHPHLNILASFSLDHSLRLWRPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP20</accession>
    <name>A0ABV2AP20_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PLD phosphodiesterase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002958</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001340">
        <property type="protein sequence ID" value="MES1921426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.870.10">
        <property type="entry name" value="Endonuclease Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025202">
        <property type="entry name" value="PLD-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001736">
        <property type="entry name" value="PLipase_D/transphosphatidylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21248">
        <property type="entry name" value="CARDIOLIPIN SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21248:SF22">
        <property type="entry name" value="PHOSPHOLIPASE D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13091">
        <property type="entry name" value="PLDc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00155">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56024">
        <property type="entry name" value="Phospholipase D/nuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50035">
        <property type="entry name" value="PLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="241"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="2">
        <location>
            <begin position="171"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="30915" checksum="31A913D2C8DB1C5C" modified="2025-10-08" version="1">MQISTIRHFKNKINDEKNPKTTNFFQPIAHRLYGYKKRAILFREILKTVKEEKSIYKEKLFVRKMCSLLSTRNVANGEFVQILSSSRHKHFRHISKSILLAIQSSSDFIRITNPYIIPPLSIQSALLQALSRGVKVAIITTGPTDVKLVKLASQIFLSNLVKRGAKIYELQNKVLHAKTIVIDGAYCSLGSFNFDDWSSKRNLEMNVTAVSTKSASILSKHFKEDLKNSKKMDKRKFKRKGGIFMLICYICLFVSRSPDFLKKLGKFYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP76</accession>
    <name>A0ABV2AP76_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002822</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001205">
        <property type="protein sequence ID" value="MES1921269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964:SF113">
        <property type="entry name" value="USPA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="23"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="18787" checksum="0580CE69D73B6E4D" modified="2025-10-08" version="1">MSKKKIENVRINDFEIPKELQNRRRILITVHESDHSIKTLSFVKEHILKKDDFVMLLMAMKRTIIPYLLTVDALKTIEDEELKREAFDMSNYLDHFDQYEKMGYLVQGENPRDTLVKAIEELKPTIIATGSHGKGVFKRLFSGSTSEYLLHHAKIPIMIVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APM0</accession>
    <name>A0ABV2APM0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003154</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001565">
        <property type="protein sequence ID" value="MES1921627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11979" checksum="A86B1A258F25EE00" modified="2025-10-08" version="1">MAIIKNCRVNFLRFFEILPRALLRATCFGFIVLTYFTSAIVLNFIQFLILRFFLIGKTKRRAIVRKICQFWWNLTDFSAFYFLGLKFKFSYSKIDYFQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW9</accession>
    <name>A0ABV2APW9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RGS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001682">
        <property type="protein sequence ID" value="MES1921726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RGS" evidence="2">
        <location>
            <begin position="50"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16425" checksum="4576CF12935C39B1" modified="2025-10-08" version="1">MYDNDVHHKQSRKRHKNQLECPNPNLIANLKPFTSCHYIEQRLNSEGKMNFDYMMSEPLGRHMLKSFFASVFSISKVIFMSDVKLFQRIRAESARRKVAEMILERFVLPADDREIEESVFAHDKFYVFLQFLTIFANQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD2</accession>
    <name>A0ABV2AQD2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ycf1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003413</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001894">
        <property type="protein sequence ID" value="MES1921880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="31"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="276"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="311"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="181"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="59"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="318"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="357"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="406" mass="48197" checksum="A9B53656FB2D9B3D" modified="2025-10-08" version="1" fragment="single">ITEGIESSKEKTRSRRKLHFKKLSQDYLTEKSKIEITENKKNDKIKTEKPKLQTEIPKQKTKKPKKQTKKPNKNKKSKWEEKEERELQQQNLEKLLLFEKEQSEKYRFLPEWNNLPSALLLKKRLSSVRKDLLNRLKSLLQIHEDTKKEREIFVKEFFRQRSKDEAFKERLRCITETDLWRKENLAEKSRLIEKIENERQKVKEQKKISQNINDDLDFALKVIIKNHLTIRNEQIERKNKHESLRERNLAIIKKFDKKKLEERQIGKQTGTKFAKISNEWTSKNKPKTSKFSSQIEKPSYKKSELKSILEQNLNQNRKSSETSNEKNGEKKSIFGKNLTEKNDEKKSIFGKNLTGKNGEKKSIFGKNLAEKNDVKKSIFGKNLAEKNDVKKSIFGKNLAEKNDVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQH7</accession>
    <name>A0ABV2AQH7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003435</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001919">
        <property type="protein sequence ID" value="MES1921904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050392">
        <property type="entry name" value="Collagen/C1q_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15427:SF26">
        <property type="entry name" value="COMPLEMENT C1Q SUBCOMPONENT SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15427">
        <property type="entry name" value="EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="115"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="5">
        <location>
            <begin position="146"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="22324" checksum="B9047D69D4ABFE44" modified="2025-10-08" version="1">MFVYPFDDVTQTRTEVVHNLFEISGLHNFGTFDNGEGYRVRLYKVYTASSANLLFIVPLEERSEGFSGDHYHQQYRGKDGGTCSAFVNIGQTSDMPFPGKVQVIGYVYYNSSAQGPKGDKGDKGDTGPAGPTGSPGPIGPVGPQGPAGPPGPPGPPGPPGPTKRSSDKCLDFGVSLISYFLDFFIISCVCNELFICRCLNENMELHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ1</accession>
    <name>A0ABV2AQJ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pre-mRNA-processing factor 19</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PRPF19</name>
        <name evidence="5" type="ORF">MHBO_003469</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair. Required for pre-mRNA splicing as component of the spliceosome.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the WD repeat PRP19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010001972">
        <property type="protein sequence ID" value="MES1921943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038959">
        <property type="entry name" value="Prp19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43995">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43995:SF1">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="4" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="54"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="138"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="180"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU367101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="293" mass="32543" checksum="9D52F3BB76965142" modified="2025-10-08" version="1" fragment="single">KFSKKWSIGSKTKKFNSFEITKNNIFIGNDDGSIGVYDQNSTKNELKPTLKNYLDHHSDRISKLSSFSPKTFVSASHDNSIAIWDKSDKFDLRKSLKPHSDKITGLSIQPMRRHFATCSYDKTWAFIDLEYAKKLRNSEKQESELICISFHPDGLIFGAGSNGGALKMWDIKSQSDVATFEHGKTSVTAIAFSENGYYLASGGSDGVVRLWDLRKSDTIAKLPKLSSAVDDVVFDPFGGYLAVCGDFGLSLYTSKKWESVKNLNKKGAIAINFDEDRLTAIQKNGSGLISYAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL2</accession>
    <name>A0ABV2AQL2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">tRNA synthetases class I catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003371</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001832">
        <property type="protein sequence ID" value="MES1921834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024909">
        <property type="entry name" value="Cys-tRNA/MSH_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032678">
        <property type="entry name" value="tRNA-synt_1_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890:SF3">
        <property type="entry name" value="CYSTEINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890">
        <property type="entry name" value="CYSTEINYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01406">
        <property type="entry name" value="tRNA-synt_1e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA synthetases class I catalytic" evidence="5">
        <location>
            <begin position="35"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="120"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="27222" checksum="5CAF995E802C1A7A" modified="2025-10-08" version="1">MSKQAHPHWEVPKPNLNKNLFVYNSLTSQKNPFYSLNENIINWYACGPTVYSSAHLGHARAYMTFDIIRRILGEYFHYDINYVMNITDIDDKIILKARRNFLLEAYLEKNEKSNLERKFKSAIEESVGNALGKLEELEEKLKLADERQKSEIEQVIKGEKVKLKSVRKMKSFSIKKLIETSQSRDVLSESLDRESGEREIDFSIFKKHSKKFEEEFFEDMKVLRTISKNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV6</accession>
    <name>A0ABV2AQV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bromodomain and WD repeat-containing protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">BRWD3</name>
        <name evidence="2" type="ORF">MHBO_003556</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002125">
        <property type="protein sequence ID" value="MES1922039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052060">
        <property type="entry name" value="Bromo_WD_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16266:SF17">
        <property type="entry name" value="BRWD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16266">
        <property type="entry name" value="WD REPEAT DOMAIN 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="375" mass="43105" checksum="F39E364CBE6BBE87" modified="2025-10-08" version="1" fragment="single">SDIALSPDDSLIFSGSYDCSIRVWDNKRDELVLVLGKHGRIVNKILLSPLWKHGEKFVASSSDDGMCFVWDFRDFCKNFENGESIFQLSKMARYPIFSYRDNPSKRRKNCISELEWNSNGKEIFCGGNGGILFSLDFDQKYLEDIGDFRHFNDNIDIDIFSKRLKQKFAGPKQTVSSIVYQKYERKEALFTSNHDGKVRIWNRFRPEDEFECSFVFSFRRCFAAKEFQQYKVLSLAFSCDKRKLAFSGTTDLIVVVDVETHKILHRLSGHRQSRNILALAAHPSEPDILFSAGYYGNVVVWDMDTGRQIKLFENRNLDPTNVLDGATSSQGNIFACVSVNGIAQLYGFECKQPYLEVPKIQFFFNDGKHGDEFGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ3</accession>
    <name>A0ABV2AQZ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LRRNT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003610</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002204">
        <property type="protein sequence ID" value="MES1922093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000372">
        <property type="entry name" value="LRRNT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01462">
        <property type="entry name" value="LRRNT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00013">
        <property type="entry name" value="LRRNT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046475016" description="LRRNT domain-containing protein" evidence="2">
        <location>
            <begin position="22"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="LRRNT" evidence="3">
        <location>
            <begin position="21"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6823" checksum="595BCBF70CABA135" modified="2025-10-08" version="1">MQLVGWVLVVLSLFYSQITYACPDQCSCGKDYFSDETFVYCGSRGLTEVPTRIPTDIYEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR17</accession>
    <name>A0ABV2AR17_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BACK domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003614</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002212">
        <property type="protein sequence ID" value="MES1922099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011705">
        <property type="entry name" value="BACK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07707">
        <property type="entry name" value="BACK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="BACK" evidence="2">
        <location>
            <begin position="122"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23827" checksum="BB2416DFD5E23FE4" modified="2025-10-08" version="1">MKYMELFWHHLKLQQKSDYIFNASSQSNLGLEQCVASLAVAARKKDSCFYQFQILSVSSKTFILSLLEKNDGIKFLSKLVSMNPFESQGLTFTVKRVQAVLASKYKIFNQYNWIEDKLRACDLPMPLFIELISFDHIDIMSENEVWIAASYWISSNISITDLKSDSVEAKQIFSVLRLHLMDKTYLSNVVCVLLLSLLLCIFLYLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR33</accession>
    <name>A0ABV2AR33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003629</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002237">
        <property type="protein sequence ID" value="MES1922114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12961" checksum="5541F52F31208DA8" modified="2025-10-08" version="1" fragment="single">MQGYLHTRFPSRKKRFSGILSDTLFLFPNELIQLRAKRVLYRVLKIKRKSISVPFIKIFCSRLPSRLYNEKHAEKVFGLLLDIVVLQCDGESRDRLNEECFERIFKIAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR55</accession>
    <name>A0ABV2AR55_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cold shock domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003677</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002310">
        <property type="protein sequence ID" value="MES1922160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="200" mass="23592" checksum="9AB6C5BB33BA9EA3" modified="2025-10-08" version="1">MSEKSDEENLTWTEDLNPENYFDWTISKSLQEKKENVNTPQNTNEEVFNSQTNLLSSKGTVVYFDLKTDEGCLREDKNVRNFFFSSKDIFSNDFLVYKGEEVLFNYNNENVENKRPEAFNIVCKSLKRRIMVGEVVFSSHERGFGWISIAIFDKNKPFVFFMEKNVLKKKDGERIEKGDRVRFIVNLEFEQPFASRLELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR81</accession>
    <name>A0ABV2AR81_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003668</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002292">
        <property type="protein sequence ID" value="MES1922152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="364" mass="41759" checksum="45F5323D1542E88C" modified="2025-10-08" version="1">MLLDWTFDPDENIFNPLIDSPTEFVQVHGDSFVHSIHFGKSSAYQINLSKSVFEEGIVQKDLKKSIDSFLNNEMSDKLTKWLKNTISAENCRVYRLPFGSFKAPEESEPITMNELKELLRLQNSQTALSPTVIDADISFYPDRIVAGALFKSREPFCSRFEQNVAPNCVDLFQSMRYLEHLADNLGSKNGEKTSLNEIKLREKAFDLKKNLLKAKEWTKKQSQMLNEISTLSLPDASNVFEGMDEEAENGNLIEKNKSYNRKTEDMEKMSFYKIDKSEKKIKDIKMATENMVSVNKVDYKTIVWLCIELTRALEKYSSQTIDSSSEIPKFVVFASFNKNVPTLLSNESHFGDFGPGLRLFCEYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARB4</accession>
    <name>A0ABV2ARB4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002414">
        <property type="protein sequence ID" value="MES1922221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13239" checksum="560A3F697A37EEF7" modified="2025-10-08" version="1">MIRDKIVFSTSGKIQQLLLRDDELDLRKAIKICQSYEQANKQVQEMKDNKDTKVHKIKTKQPRATKNPKPPAQRFRPRKPNEKHKPSIKRCKFCGQKHPMKKEECPAWGQKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC2</accession>
    <name>A0ABV2ARC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003734</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002425">
        <property type="protein sequence ID" value="MES1922225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050116">
        <property type="entry name" value="DNA_polymerase-Y"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11076:SF33">
        <property type="entry name" value="DNA POLYMERASE KAPPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11076">
        <property type="entry name" value="DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14949" checksum="317200106F9337EE" modified="2025-10-08" version="1">MSHLSVRKIPGVGKVTERILKEIGIEKCKDILKNVDLLFKYFKEKTVIFLVNSALGIGSIEKSKNDQRKSISTERVFRPLNNRFELEQKLTEICSVLANVKISIFLRKFCFFNDFRTILIKRDLKIQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARK9</accession>
    <name>A0ABV2ARK9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CWC16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002348">
        <property type="protein sequence ID" value="MES1922179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007590">
        <property type="entry name" value="Saf4/Yju2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12111">
        <property type="entry name" value="SPLICING FACTOR YJU2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12111:SF2">
        <property type="entry name" value="SPLICING FACTOR YJU2B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04502">
        <property type="entry name" value="Saf4_Yju2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="13"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="23"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="282" mass="33234" checksum="02BCA3D6E41A03BD" modified="2025-10-08" version="1" fragment="single">MSSLAAARADNFYHPPDWDPKKSSRNKFQKSRGRNQYEQKHMVRFEMPFNIVCDGKKRNVEEHHIGAGTRYNARKMAVGFYFSTQLWEFDMCCHQCGNKIIIKTDPKNRAYEITKGGRIRIEKYSAEAAKVLKPVDPELMEKRDKDKMFALERDTEQKMATADKKKEIAKIFSNRMNRKNDYDLARKLRKRFNKNSVKEKIRNFNGVLLPVEKDDVTRAKIFRLKNGLKRDKKRFAKIKALQKVKMATEPIFGYKKGLSKKAKTEIRSKRLLVERNIKLCKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN1</accession>
    <name>A0ABV2ARN1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribosome biosynthesis protein nip7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">NIP7</name>
        <name evidence="7" type="ORF">MHBO_003825</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NIP7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002577">
        <property type="protein sequence ID" value="MES1922318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd21146">
        <property type="entry name" value="Nip7_N_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd21151">
        <property type="entry name" value="PUA_Nip7-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.450.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.10">
        <property type="entry name" value="PUA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040598">
        <property type="entry name" value="NIP7_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055359">
        <property type="entry name" value="Nip7_N_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036974">
        <property type="entry name" value="PUA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016686">
        <property type="entry name" value="Ribosomal_synth_fac_NIP7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005155">
        <property type="entry name" value="UPF0113_PUA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17833">
        <property type="entry name" value="pre-PUA_NIP7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03657">
        <property type="entry name" value="UPF0113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017190">
        <property type="entry name" value="Rbsml_synth_fac_NIP7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88802">
        <property type="entry name" value="Pre-PUA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50890">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="PUA" evidence="6">
        <location>
            <begin position="93"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18652" checksum="71211F6D42F2747B" modified="2025-10-08" version="1" fragment="single">MRQLTEDELEKLFEKLSKYIGKKVRNLVEDNSNVIRLHKEKVFYVPKSNLRDAENVEKKKLFTTGVCLGKFTKTKKFRLNITALPILAEFAKHKIWIKQSSEMSFMYGNNVLKAGIGRMTENTPKYQGVVMLTMNNVPIGFGVTAHSTEECRDLDSSAITVFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS19</accession>
    <name>A0ABV2AS19_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">mRNA decay protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">NMD2</name>
        <name evidence="1" type="ORF">MHBO_003990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002907">
        <property type="protein sequence ID" value="MES1922473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039762">
        <property type="entry name" value="Nmd2/UPF2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12839">
        <property type="entry name" value="NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12839:SF7">
        <property type="entry name" value="REGULATOR OF NONSENSE TRANSCRIPTS 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="27033" checksum="D8212C74CF3F3B29" modified="2025-10-08" version="1" fragment="single">MLEHLKTNGRLSTKRLESLKTVNEDYNKSFILISSMAESLGSSMDMSEFALKSAETCDEILMQLWKEITGDVKENLFEDEETRAFYEDFANLEMYVKRIDKKETEKSEEKMAEEKLKLEALRKHLGIYDQTEEPPKEKLSGISLLLSDLGNANNKAKIDSIAERFCALNNLDAQIQLMGKILKVRKDKLGQILFYCRLIATLSKFFKDFEKRIVEVLEKQFYGMFFAKDKVFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS34</accession>
    <name>A0ABV2AS34_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002652">
        <property type="protein sequence ID" value="MES1922359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046553879" description="Secreted protein" evidence="1">
        <location>
            <begin position="24"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="90" mass="9654" checksum="E2A632337398CF40" modified="2025-10-08" version="1">MASWSVNFLGVFWLHWLSQMSGARDPKFERGAHVRGRSQPPMGSPCPLAPGNPMGCPLCLRCWCYGSDGARGPNGFEIPSGVYLGPCGAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS43</accession>
    <name>A0ABV2AS43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">AAA ATPase midasin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MDN1_3</name>
        <name evidence="4" type="ORF">MHBO_004004</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002925">
        <property type="protein sequence ID" value="MES1922486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00009">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103:SF2">
        <property type="entry name" value="MIDASIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48103">
        <property type="entry name" value="MIDASIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase dynein-related AAA" evidence="3">
        <location>
            <begin position="14"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16220" checksum="2CEB64C735D0ED14" modified="2025-10-08" version="1" fragment="single">MFNILRAMQLDKAILIEGSPGVGKTATISALAKLTKNKLVRINLSEHTDIMDLIGCDLPRGDKFCWEDGVFLKAMRNGDWVMLDELNLAPQQVLEGLNSVLDHRKCVFVPEIGENVSCADGFRVFATQNPLSEGGGRKGLPFSFLNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS47</accession>
    <name>A0ABV2AS47_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004013</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002960">
        <property type="protein sequence ID" value="MES1922495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="300" mass="34511" checksum="78E83456E4E0A9F4" modified="2025-10-08" version="1">MIQNKLLDLSLVDSYFSQSMTSKRPLLHMRSVYFAACFFNILVVAEKKLEKDDFPKIFSVFCDIAKGKYQRNNIDGAAFEYFIKIERLYSRLSAESKSPKTDSENPNLPEYAKKDNSGTSEKDMKLFSLHKEVKTKPKEQKPKEREKTDLEVSKIEDRAEAKMLLIEWQKSIKRFGGEAEFATSENLLKRLSDRRFVCKLIKVVLDLSETDQTKNGGSFGLRNSEELAKMVAAVARHAVELSPSRIFVLKSVFVALVEAVMVHLRKEGNPRVPHWFILRLLENFKFGDNLESKVRVQVFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA4</accession>
    <name>A0ABV2ASA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004057</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003062">
        <property type="protein sequence ID" value="MES1922543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="80"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21666" checksum="21375C774934AA6C" modified="2025-10-08" version="1">MSFRSQKNLRTFNNDSTDFNISEMSSNAVNKTLEVKKLFETLRNQRILEKCLNRELGKGLFLAKRQTSKNETRTLILQIADRVQNDAEKAKLKKRILKLQNEVDNRKKSSDRQKSIFREKLRCSNFSAENINKNLRQSEKTVERLRKDAEEKIKKEKENAFLNAKIENLVAEMDKGKKMVRMKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP2</accession>
    <name>A0ABV2ASP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004213</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003438">
        <property type="protein sequence ID" value="MES1922690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="12463" checksum="98A9F6D96DD0FA58" modified="2025-10-08" version="1">MTSSVVSSLGSELTPFSSVAVHRILFPLSGFWTLFIINTLLPDPVTTNRGSVIAAPSTVHVNVTGRPVVGTDVDAAVQVRLCCLWLIRFPCKLITGSVGGPNSQIKYLHYESTTFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATA6</accession>
    <name>A0ABV2ATA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004421</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003974">
        <property type="protein sequence ID" value="MES1922890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18005" checksum="DF8D09AA84FC8B69" modified="2025-10-08" version="1">MIANWDLLSPAKEDTAKDQIHKKQSKQRKLVVLINEFKKQSFPPLENALEISRDGRRQNDIVVLLQLAKLKKQMKVLGRSKSVESALNFIAEEENSDFFASPRTKFSIFDFMQKAEEAALVIKETGGTAKRTDGELPAAKSVDSGGPGTGDGGPTRNSFNVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATC1</accession>
    <name>A0ABV2ATC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004439</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004005">
        <property type="protein sequence ID" value="MES1922910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12774" checksum="F68303D44715C354" modified="2025-10-08" version="1">MQFDKGKLTIIKGDSEAFKVSVMDKETQTLRPFIDGDKIYFTIKKRINTAEKILQKVITTFDEGIAVVELTPEDTANILVDDYIYDIQVNFANGTIKTIAKNKFEVDGGVTYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATD5</accession>
    <name>A0ABV2ATD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004454</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004057">
        <property type="protein sequence ID" value="MES1922924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007499">
        <property type="entry name" value="ERF_bacteria_virus"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04404">
        <property type="entry name" value="ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="17757" checksum="8C1B09DD70C6BDF5" modified="2025-10-08" version="1">MLPVKCNAKEIDFQYEKSGYQGKVDKKAITMTSLVTTWKVVDVDSGESIEIESPGNGADTQDKGAGKAFTYAYKNAIQKMFMLFSGEDTDNDHSDKLDNAGTQVSVTMLKEAINNVGTDEQTILDSYCDKYKKTCTELKFMSQEGKQYYYNRMTKAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATS8</accession>
    <name>A0ABV2ATS8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004483">
        <property type="protein sequence ID" value="MES1923052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45766">
        <property type="entry name" value="DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45766:SF6">
        <property type="entry name" value="SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="9414" checksum="F23DD29531E92CC0" modified="2025-10-08" version="1" fragment="single">TPSRPIELYTQLQCLLPPKKSAKEWFMSRYNYSTRYCDGHKEMRGRMFVWNDKGNSNLTELNIMLNRDVMIRRLKKDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU4</accession>
    <name>A0ABV2ATU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004349</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003820">
        <property type="protein sequence ID" value="MES1922823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="107" mass="11826" checksum="23DB18307BC48F29" modified="2025-10-08" version="1" fragment="single">DVGNKTCHYSNAGNMADSAIENSGENTILMTSVDNNCSNEEASFRRKKDDDLVLNVMNQCQESTTVHIHSTKEAGVGEHITKYENVDTKDEVKGYVMKDIIDAVTQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU52</accession>
    <name>A0ABV2AU52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004753</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005112">
        <property type="protein sequence ID" value="MES1923210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="216" mass="24642" checksum="F9027450BD25770C" modified="2025-10-08" version="1">MAKRFIKDIRFFKLDNSSLLSSLQKRSAILQKFNSFAKNTKLSEQLKISEKTATQNLQYILDKPSFPNISGLSPDTWNSKLKSFIEELSNKKDFFLNREAPKEKKSFFEELFQIYKTCSNSNDFEVKQTRNTALCALIAFSISSASLSLLLKVVCLLMDLVEENEEIDLEMVENFFGILGKFDADCGLSVPISGLKDIEKSNMIVGLFVWLNFVIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU98</accession>
    <name>A0ABV2AU98_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005267">
        <property type="protein sequence ID" value="MES1923245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13613" checksum="5FE9476464877B94" modified="2025-10-08" version="1">MHSHTDFRKSLLYTQMCSVHHHVNKVCFYSYYMSYYRNIHKLLLHIQTYIFRLVNICYLNNSNCILYYTYTHNIRQHTHGCIYHILNHRNHCGSSCYTVVCTMYHNILVDTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUA8</accession>
    <name>A0ABV2AUA8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004793</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005292">
        <property type="protein sequence ID" value="MES1923248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032847">
        <property type="entry name" value="PRPF17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43979">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43979:SF1">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="112"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="21"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="28"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21853" checksum="AAACE9D13D8E8E08" modified="2025-10-08" version="1" fragment="single">IDGFKGPWAKFEEDEEELAEMNAKQKRLKELFQQREKAKNKKSNENKQPSEPDNKTNEKSEKTEDSNFKETTVFEYTEERDYLGRTYMFCPHEFRGEKNQRCFVPNKKIHTWTGHTDAVTKISWFPKTGHLLLSASMDNSVKIWDVNSHRRCLRTVTGHQMGIRDLSLNRDGTKFITVSFDQWIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI4</accession>
    <name>A0ABV2AUI4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">B30.2/SPRY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_004888</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005646">
        <property type="protein sequence ID" value="MES1923331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001870">
        <property type="entry name" value="B30.2/SPRY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043136">
        <property type="entry name" value="B30.2/SPRY_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045129">
        <property type="entry name" value="RNF123/RKP/RSPRY1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003877">
        <property type="entry name" value="SPRY_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13363:SF5">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13363">
        <property type="entry name" value="RING FINGER AND SRY DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00622">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50188">
        <property type="entry name" value="B302_SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B30.2/SPRY" evidence="4">
        <location>
            <begin position="45"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18246" checksum="D9E1B201EBE09B45" modified="2025-10-08" version="1" fragment="single">LMPFSVLVHNSNDNNKNFKELIKSNKFPEMLCFLQNVCHKKQFSAINNAEKLRKRNSFRKGPQKVSLKPIRDYNVLITETERGFSIKSEKDFVTVVGDVTVTKGAWYYEILLENSGLMQLGWANEKFMPQNIESGCGDDNFSWAYDGSRQLIWNESLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUM2</accession>
    <name>A0ABV2AUM2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005833">
        <property type="protein sequence ID" value="MES1923365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12234" checksum="8A54B12896613BB2" modified="2025-10-08" version="1">MEDKLQNIKTFEFLDVLANTATFRKEHGRKALCLFLSDGSTTNNILWVFEHVRNLNFWDNLALDEGKDTILSEIPRSFLKHLVEDLVRLDRDEEVKRGKNATKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUN6</accession>
    <name>A0ABV2AUN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004956</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005958">
        <property type="protein sequence ID" value="MES1923390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13230" checksum="4FF3AFD6C442E04D" modified="2025-10-08" version="1">MDTAKSQNCSDLFVGTNCSIFCVEDYTKIGNNPICVAKNNNTFDFVEIPHCFRKDDNFFKSTIWPIFLYAIMATCLVMAGIIMVSNIKVAVAADEIEEELDFADPQYIDPEIRIDVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ5</accession>
    <name>A0ABV2AUQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004929</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005830">
        <property type="protein sequence ID" value="MES1923364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6399" checksum="96A12C2DCF7FC38D" modified="2025-10-08" version="1" fragment="single">IAAWSDEEHVIQNRALYQAKFDAVLTVLSGYLKVDKPDAGFYLWPQTPINDIDFSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV6</accession>
    <name>A0ABV2AUV6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004713</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004974">
        <property type="protein sequence ID" value="MES1923168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10951" checksum="11A4CF37D9DB74F5" modified="2025-10-08" version="1">MFSIPSAILNYWGRSLNEGNEFFEKYLEDNKENALDFNTNFVKNEIAFKDDQNFDALSSNYEKNNFKRMKRRISPATGCGSIFFDELIQNKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV26</accession>
    <name>A0ABV2AV26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA topoisomerase</fullName>
            <ecNumber evidence="4">5.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004879</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the type IA topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010005621">
        <property type="protein sequence ID" value="MES1923324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.460.10">
        <property type="entry name" value="Topoisomerase I, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.20.10">
        <property type="entry name" value="Topoisomerase I, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.290.10">
        <property type="entry name" value="Topoisomerase I, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000380">
        <property type="entry name" value="Topo_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013497">
        <property type="entry name" value="Topo_IA_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013824">
        <property type="entry name" value="Topo_IA_cen_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013825">
        <property type="entry name" value="Topo_IA_cen_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013826">
        <property type="entry name" value="Topo_IA_cen_sub3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023405">
        <property type="entry name" value="Topo_IA_core_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003602">
        <property type="entry name" value="Topo_IA_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390:SF20">
        <property type="entry name" value="DNA TOPOISOMERASE 3-BETA-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390">
        <property type="entry name" value="PROKARYOTIC DNA TOPOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01131">
        <property type="entry name" value="Topoisom_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00437">
        <property type="entry name" value="TOP1Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56712">
        <property type="entry name" value="Prokaryotic type I DNA topoisomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52039">
        <property type="entry name" value="TOPO_IA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Topo IA-type catalytic" evidence="5">
        <location>
            <begin position="1"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS52039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="17223" checksum="43913F3D39246563" modified="2025-10-08" version="1" fragment="single">GVDCGDDEPISPVENGSGLSGKEKSIYDLIASNFLASISPDCEYMSFKTDFKVADETFSLKASKTTKRSFIELNENYGNFEGQFPLLEKGETVPLKNVIILSEKTKPPSYLSESQLLTLMAKNGIGTDASMSTHIQNIINRNYVTTEKGRTLVPTTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV73</accession>
    <name>A0ABV2AV73_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005157</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006917">
        <property type="protein sequence ID" value="MES1923565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="6671" checksum="EEB2CC5AF91EA65F" modified="2025-10-08" version="1">MDAAHWIATAIAAVMPMVANDIGEIIEPNATASVFTAPAAPTWPNAALIWVPCCNAMVRGLKPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVI0</accession>
    <name>A0ABV2AVI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007268">
        <property type="protein sequence ID" value="MES1923627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046514284" description="Secreted protein" evidence="1">
        <location>
            <begin position="25"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="92" mass="10572" checksum="ECE21C527A3294EB" modified="2025-10-08" version="1">MLATKILCFYFSIIALFQQTLVFGECDRNVGPVGSPECVLLTPYYHKYQWGTCVTNSYMQTASKGYAMCRDHSATYCYYQCMLELYEIAEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVV1</accession>
    <name>A0ABV2AVV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ATP-dependent RNA helicase mtr4</fullName>
            <ecNumber evidence="6">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">MTR4</name>
        <name evidence="6" type="ORF">MHBO_005098</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010006597">
        <property type="protein sequence ID" value="MES1923516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3380.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050699">
        <property type="entry name" value="RNA-DNA_Helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012961">
        <property type="entry name" value="Ski2/MTR4_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131">
        <property type="entry name" value="ATP-DEPENDENT RNA AND DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131:SF7">
        <property type="entry name" value="EXOSOME RNA HELICASE MTR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08148">
        <property type="entry name" value="DSHCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01142">
        <property type="entry name" value="DSHCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-dependent RNA helicase Ski2/MTR4 C-terminal" evidence="5">
        <location>
            <begin position="1"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18391" checksum="1D04908BF27F784E" modified="2025-10-08" version="1" fragment="single">GRVACDISISDEFLTPELLLTWCFNDLNVEQIVSLASCLTGGDRAEVKVRLKNELADPYFRLQKAAKHVATTIRDAKIEIDFDQYVNSFRPNLMEVAYAWCKGAKFAQICKMTNSFEGAVIRVIRRLGELLEELSNASKIIGNEELAAKFEKGSKLIKRDIIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW56</accession>
    <name>A0ABV2AW56_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005114</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006659">
        <property type="protein sequence ID" value="MES1923528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015496">
        <property type="entry name" value="Ubiquilin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10677:SF3">
        <property type="entry name" value="FI07626P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10677">
        <property type="entry name" value="UBIQUILIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23195">
        <property type="entry name" value="UBQLN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14592" checksum="29DCA88B35913394" modified="2025-10-08" version="1" fragment="single">IVSNPALLNELMRNKDRVIQNAENHPEGFNVLHRMYNSVEEPLHDAMKGSFMQKSFKNTEKDRSVPDRFSLPSDEEIPDPWNVSATNSRIFGNNNWMKQKVVRTVLKPVNKPKQQNSTTSNQSTLDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWF8</accession>
    <name>A0ABV2AWF8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005269</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007461">
        <property type="protein sequence ID" value="MES1923651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="12612" checksum="0CA9E2A64E57F75E" modified="2025-10-08" version="1" fragment="single">NLSSFEADFNENNRRAEENESNTYEQAVNGSVAGLGVLKNWKLSGNAATGELAYVRTGNDPATGKPYDPNNPANQTSLGTIGVRATNRSDYTSTTEMAQAEVGALAEVINSTLLDNQAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEA0</accession>
    <name>A0ABV2AEA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000048</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="7440" checksum="B994102BD6BDD158" modified="2025-10-08" version="1">MRHVASYCAGFNVMGYKGDYQSTKNGKLLCAVSCDTALGYFPDGFYKQSQNLRKSSTEPSLTTRSTSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEA4</accession>
    <name>A0ABV2AEA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000088</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16808" checksum="A42412D12AC43E21" modified="2025-10-08" version="1">MSEREVNRLTIALSQSSETERMQQLEDDLSKLTDQNLVLKGAISELEERNESQSDEIEILVQKLAETELEDKKENRDPEEAVRKSPKAVKAGELKEEDESLREKLEQINLWEKELNLLEKNLTSREKKIADKEKYIEEFTRFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEG7</accession>
    <name>A0ABV2AEG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000126</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000016">
        <property type="protein sequence ID" value="MES1918108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="235"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="20"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="31939" checksum="32B14377091CE6DC" modified="2025-10-08" version="1">MSFRFKNNENENYQVKPFPSNLSGVNQSNSLYADDDQANNRPYNTDITFDFTEIGKQKALILSNVYFPDAIEVKSSSLEFVRDEYDENRRQMKFLFVPDGEEHVLHIQNNSKTQHNIKLTPKTPTIEMFSVRSTRLLVRNLYNRKYLKLKSNNYLKWNLESHPTINFAYFLNFDPLGKSHNIELHYVPRNGQNVLCENGKIKLDIKNFSHNETQIYPMVYPMGLTKTVSTEENKYSKENEIENEIENEIENEIEELDEEQSLFNEIRPGLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEL7</accession>
    <name>A0ABV2AEL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cation-transporting ATPase 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">SPF1_2</name>
        <name evidence="10" type="ORF">MHBO_000165</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000021">
        <property type="protein sequence ID" value="MES1918155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.150.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004014">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059000">
        <property type="entry name" value="ATPase_P-type_domA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006544">
        <property type="entry name" value="P-type_TPase_V"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45630">
        <property type="entry name" value="CATION-TRANSPORTING ATPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45630:SF7">
        <property type="entry name" value="ENDOPLASMIC RETICULUM TRANSMEMBRANE HELIX TRANSLOCASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00690">
        <property type="entry name" value="Cation_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00122">
        <property type="entry name" value="E1-E2_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="Calcium ATPase, transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="222"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="domain" description="Cation-transporting P-type ATPase N-terminal" evidence="9">
        <location>
            <begin position="166"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase A" evidence="8">
        <location>
            <begin position="263"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="449" mass="50467" checksum="917B73B89A9F51CE" modified="2025-10-08" version="1">MTQTQLFKSFRLLRKRNNVLFYHNVYPFIVSSLLSTVLLFAFPGQKFSLKMREISLSFEITPFRAFAGCFALISALFLFALLCSLWSLEFKSFVMYQETKSVSNASHAFVEALPHCGSSEICPLSDLGQKTFFVFQKTKHFFDSSSGKFEPVAFPISMPIKRYLESKGLEDQDIPKIENLYGPNEFEIPDISFSKLFIEHISAPFFVFQLVVVVLWSLDGYIGYSLLIVAMLLLFEASMAYRRLKNLSDVRGMRFPSFPIYAFRNGKWTLIDSSRIFPGDILSFRAARSVGAPCDVVLLRGSAVVNEALLTGESTPQTKTAINSFDEVDQVLDLSAKHKSSAVNGGTFVLSASIGSPSEAVPPLVPDPPDGGALVYTLRTCLPSNQSFRNQPRTVASHHSPFDRKRFSRLRQRRAEVSSGSFECFCVLRSVRFQEEHRAAGHRRGRPLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEP2</accession>
    <name>A0ABV2AEP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000151</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="17784" checksum="422DAA98885C93A0" modified="2025-10-08" version="1">MKRKENEIENKKGEIEISERLKMENEEQTENLKKKLILQKQIVDDQETKLSEQINNKENLEKKLKAKDKELSRIEKEVASFIVNKRHSINEKKSKIDNFAKIAKSIQSKTKLVFDMNDNLKEQLRTIQKLKKHLEKTVCYSNSVTNNRLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF15</accession>
    <name>A0ABV2AF15_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000268</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000036">
        <property type="protein sequence ID" value="MES1918281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="63"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="8797" checksum="1E849FFE3F6F17B0" modified="2025-10-08" version="1">MDYLHPQNEKHFKLQTFILRLFHPLLRLPSLRFGTASTQNFHSCRGRSSGARRSLFPRGCPRSPSSVLPTLSTSFPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF83</accession>
    <name>A0ABV2AF83_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000328</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum lumen</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000046">
        <property type="protein sequence ID" value="MES1918349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="entry name" value="Substrate Binding Domain Of DNAk, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45639">
        <property type="entry name" value="HSC70CB, ISOFORM G-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45639:SF3">
        <property type="entry name" value="HYPOXIA UP-REGULATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00301">
        <property type="entry name" value="HEATSHOCK70"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0143">Chaperone</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047497652" evidence="9">
        <location>
            <begin position="22"/>
            <end position="898"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="844"/>
            <end position="898"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="542"/>
            <end position="591"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="859"/>
            <end position="874"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="875"/>
            <end position="884"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="885"/>
            <end position="898"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="898" mass="102859" checksum="BB6CC0ABEF214D02" modified="2025-10-08" version="1">MQMIKLLFLLSSLSLISFVHSVVLGIDVGEQSIKVGAVAHGKGIHVMLDGQSKRKIPSLVFFDDSERRFGNEAVNSAIKKPDKAVSNFKSALGYNGDVEEALTRWPDLRQSNVSSNKKDGKSESVYFSVPLEKEHRDLSPSEILAMLLLKIKDFSISEHNFVISAASITVPQYFTQSQREAVLKAAKLAEIEVSSLISENAAAAIQYGVQFSGEKAKSVLFCNMGHSKTEISIFKFEKEKKNKKIKRIVEEMDYAFDDSLGGRDYSNALADFIISDFKEKKGFSEEDVFEMRKNKRKMAILKTKVEKAKKVLSVNKESFVTIEEFYDEKDIMKTVKRSEFVAQTKNLTARITALLAQLKEPFDEIVFLGGATRIPSLREAVKLFTKKNATKTLNPDEAPALGAAIRSAHKSAAFRIREVEPFFKNPFQVEMTLYYNEVDSSDSEKLKAKSVLLFKLSDYLDRKRSVAFNCKSDIQGKVLYSDSKLPAGQNPLVFQFSVVGASEFYALNKERGIPKVNIQFHLDENGMIKIANAKAFYKMRDNNDVDNKKENIETKKDDKKENIETKKDNKKENIETKKDDKKEEKMEMKLKIKYLDGKGSLESLSGNLYEDSLRKIQEFEKRDLVTKKTVEKMNQLQELTFKYIDVTETDLYKEKTTDEEKSKIAKLIKQTENWLSENTGDNKTSEDEYIKQIDKIHNCTKVVMDRLTEYLELPKAVEYANEVMSFVSKVVNQTIAKKPWIPEKEIKAFSEKSHEYIKWLQEKIDQSKKLAKTADPIIKYEDVVIRADELKSKAEEFSMREKIEKPKSSNFSSGGKFWRRRKAMTRRKSIRTYLDDFLKKTKQVFVPEQSRPRKKTHSKNGDKKGENDDRKAENGDNNNESESAENFKSESDDLKKDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE3</accession>
    <name>A0ABV2AFE3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HEAT repeat-containing protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000378</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in nucleolar processing of pre-18S ribosomal RNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the HEATR1/UTP10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000058">
        <property type="protein sequence ID" value="MES1918410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040191">
        <property type="entry name" value="UTP10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13457">
        <property type="entry name" value="BAP28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13457:SF1">
        <property type="entry name" value="HEAT REPEAT-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="1" id="KW-0698">rRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="2098" mass="241833" checksum="5C0192ADB6734884" modified="2025-10-08" version="1">MTLLSKQLAHLSTDYKNSISDKNTKRKPIRTLTASFLFEPKVAREIDNTTIYKMGLEGLHELSDDFPAFLSFEKSIFLPQRFAIIRMLNFRYLNVSVNRSAKTKSELEQLDKTIRKFLKLLSPFFLKTSSHKCVEFLIRFFDANEHFPESLLLCALPFHTSSYFLRLVQILKFGHSRWDFLYGKSASSQEKQEMAPLKTDFLLRKATSDIFILKLICSDAVKTANLLGKTDKVDCSKFDFFEKMAFSVFSGNSSSAKSSKIRVFLPILISGVDSCHPKFRSSCFSVLLRISDSLSLRGDLQNDLLSPCFKRIDEDDETLFFVCAFFQKQKESIKIKQKELKKLLGKIPKILKKLKLKKESSNFVLSILSSLVNHADNGSENEHSEILAQSLKAIDFENVVTTQIAVKLITEKLFGKSNPFSKVLQLIFHSKNFVFDDFFDNEIFLQSPKKYIDKLKKDVKRSLMFGETDFFEKWVLRLKTDFGADMKVDGGFLQLSSQNFNKIEKHLESGKQPSIREKAKISNFVANFCKVLCGFYNGHNSDLQKIGKRRVWDKIITAFQIAIFLKKQNFVVRNNKINKNLTTFFDKNVFDFIVTSFFERFMDESAKPEILLKLVLNFFGEFRYFVDNSQIWIEGVLVACCNNKRMLKILIEYIEKEQSTFSLTTMPLIKNFASESLDGKTGEKGFFGLERISGKNRKVDKGVVTMIKALLPTFKKTDLPKILEILLKIFSNFRFSGDSEIEEMSNLLKNVFIAASKTGNQILITRVVTIAILRFSVKAIKIQNLVVNCFDHQNLISLCAKILLTKFLNLQQPLFNPSKNFAKNDFEISNFCKNFESVKAKNLLQISKTAENLLQIILELKKSESFNFELLKIALIIIKNGANENGDNVEVAIKSISETISITDFSTESILAKLPKLKNGIDELVISIQILNFLMSNFNKNGGLDQSETASKLLNFAVKIMEQISKKGKIAQIVKNLFDYETTMSLISDEKHQVLEKVICFYFRDYYFGGSEDKNILFFEKTFYKLNKQSKEKILKSLTKNVNFAKIFESIKIRQIVNINFLLKIARNSTKLLEIKNISKIKQHQKSTLNSEKTAFKILELTEKSIKNICAFTAKFSPKEIAHFFKLMTQLIQKIALKKQNRLLPILLKTVRRFIKYSSETQKINIENFDIEAVSKALNGNIENEREFVKILTVLCKTSNLDLSQKRKEDILRNTNYFLLTKEKSLNKNMSNCIKKLIPFGLNFIYSENLKIETKIVKSLAKSFLDFGDKNSIFSKLVQNFQLKELSSFFVEFEFLEFKNIENFGNKNLTLSSAKMLNLFKILPIQKLLLVSASILENSKIFSKCGDFGFETEKLLIAVCELIKIKNWDSDNKELEKKDKIGAMSALLKGLSNFSNIFSQRLFSKIFENCESNKTEMAVLEIEKIKNVLLSEKEFSEIMNFFPIDKNSEKSRKNVHFLRIYRRLIDCKCVIFDHFDLETFLKVLLKLADNNEDETSSQILQKNLVQNIVTREIQTSLSENDGESSEKESQFDKIKNVFSSAIKIIYKNLNVHQRTKIKILTFVLENFDYGNGPSSMLNNRFQTIIDLLETSKTVETNNRFDILKLVTICLKYFKTDLSEILKIYQNNFLKTENFLKAKNFSVKKRNSENIKTELNFIHVAILEGDVLNEKKISETAKFFKQILLFLFSVSNLEIDQIITIQNDLLTSFLNLKIDQILTCVLEKTNLKFVLKTAKEIFDETIAEKQLETNLLKLFSFVDMAVSSKSLNLECAKIISDLLFDAMDVHIDRNSSNEFTKQVHSLCTKMQLSHCFTTFCLRLTEKQMISQYEKLKNWVEDVKTVEMGQISLPIKNRKNENSFEVKRRKFEFFLSVSKNLIESIDSLFLPLLRYSMSTCGLCLKFVTSENPPKNKNFVEESKAAIKKIKVANQKMAMAKPTNSYFLVENLLKLLQLSVDQVRKSRSIAEFSETEFEHIETDICKLMETEYKNSKFGFPQFSREFANFVKKLSVVVPGDEKKSLLVRSLLFYTHNRFAKVRMCAVLALKNLIIALKGALPNISVVISAVSERLEDDNEMVENAARDLIRCVEEQTGEKLNEFLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG4</accession>
    <name>A0ABV2AFG4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Acyl carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">ACP1</name>
        <name evidence="15" type="ORF">MHBO_000371</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Carrier of the growing fatty acid chain in fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the acyl carrier protein (ACP) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000056">
        <property type="protein sequence ID" value="MES1918402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="entry name" value="ACP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01217">
        <property type="entry name" value="Acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003231">
        <property type="entry name" value="ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00517">
        <property type="entry name" value="acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20863">
        <property type="entry name" value="ACYL CARRIER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20863:SF28">
        <property type="entry name" value="ACYL CARRIER PROTEIN, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="ACP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="12 13" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5 13" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="11" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4 13" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Carrier" evidence="14">
        <location>
            <begin position="20"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1918402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11806" checksum="3D789C215E009E49" modified="2025-10-08" version="1">MNRAINRSLRYFCSSILDRPNIFKRTVKVFKMVPSLKNYEVSKIKDDSNFVTDLNLDSLDKVEIVVGLEEEFDITIEEDISDKFTTVKEAVDYIYKTIQKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFN7</accession>
    <name>A0ABV2AFN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GOLD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000442</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the EMP24/GP25L family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009038">
        <property type="entry name" value="GOLD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01105">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01190">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50866">
        <property type="entry name" value="GOLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046357136" description="GOLD domain-containing protein" evidence="2">
        <location>
            <begin position="20"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="GOLD" evidence="3">
        <location>
            <begin position="27"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21291" checksum="756D7C2BA39C2341" modified="2025-10-08" version="1">MPFDNLICLVLLLVVNIESYVVDVQGTTCFKQQVDFQNKLRLSYRVLNNVENALVITITSPSNEMVFSNSGRREDDIELNGNTEGKHMICFESKTHKLLVINFSVRVDDMNQIISLPKEEQLQNIGKLFFEANKGQFDLMEELSLIMDHQSFLRTRLSYVKKQLRRSRSRILYISVFVYAVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFR0</accession>
    <name>A0ABV2AFR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000471</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000074">
        <property type="protein sequence ID" value="MES1918506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.240.10">
        <property type="entry name" value="Tyrosyl-Transfer RNA Synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050203">
        <property type="entry name" value="Trp-tRNA_synthetase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43766">
        <property type="entry name" value="TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43766:SF1">
        <property type="entry name" value="TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="37055" checksum="99E26FE80F647A0E" modified="2025-10-08" version="1">MAGKIKKNVLCVFRVKKGIHLGSYLGTVKNLKYLANSNILYICIADTVSFLEKDLIFSNNAKTNFESITSTLLASGLDASNTKIFRLSKIRQIFDIAWILGCPLKIGNKNLIQLYSKLLYSAVIQAIQPTHLFIGTTQRDKLLYEETKNVLLSQIKKKEGKQELFYKEIFSTLNEPIKSLQNPENDMGEEADKTNFKGNIYLTDGDSTIVKKINRSVTDSEKGISRFSKNGEKRIAMSNLINIFAALRNEDSKNIESLLRERKNKKDFKDEISKLVIEQVSPIRKRAFSGFAKTEEFLVENEKEISFLAIKQLEILKKCNFIFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFX5</accession>
    <name>A0ABV2AFX5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">30S ribosomal protein S11, chloroplastic</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPS11</name>
        <name evidence="5" type="ORF">MHBO_000324</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00364">
        <property type="entry name" value="Ribosomal_uS17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000266">
        <property type="entry name" value="Ribosomal_uS17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028333">
        <property type="entry name" value="Ribosomal_uS17_arc/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032440">
        <property type="entry name" value="Ribosomal_uS17_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03630">
        <property type="entry name" value="uS17_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744:SF9">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00366">
        <property type="entry name" value="Ribosomal_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16205">
        <property type="entry name" value="Ribosomal_S17_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00973">
        <property type="entry name" value="RIBOSOMALS17"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS17 N-terminal" evidence="4">
        <location>
            <begin position="4"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18082" checksum="01FF1B6185AF9AFA" modified="2025-10-08" version="1">MADQNQRAFQKQPTIFLGSKRLLARKTKEGKARFWKNIGLGFKTPDAAKHGTFIDKKCPFTGNISIRGRILSGKVISAKMQQTIVVKREYMHFVKKYNRFEKRHKNVSVHCSPAFKVKIGDLVTFGQCRPLSKTVRFNVLRIDRKSDSLSDVKVFKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG33</accession>
    <name>A0ABV2AG33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000554</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000093">
        <property type="protein sequence ID" value="MES1918610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10939" checksum="CB1248D03827E0CE" modified="2025-10-08" version="1">MRIDALLKEDVKLENVEKLKSIISEFANIDNYEKLGNAIDFDKTEKTIDSIKNFLIRKIDRFEEKIQPKHKVHSYDLKRKELIDNLKDIGMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG71</accession>
    <name>A0ABV2AG71_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000354</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000051">
        <property type="protein sequence ID" value="MES1918383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9926" checksum="95C8962CDC647852" modified="2025-10-08" version="1">MLCRLRLDQNNELRRLEMSSRAKDKLLEYHRICPFLSPVIPSAEGEQYVLDLKYEVGKGNLRQRIKNLNRRQISFKTNIKFEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGA0</accession>
    <name>A0ABV2AGA0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000381</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000059">
        <property type="protein sequence ID" value="MES1918413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="36801" checksum="551FDDD96CA9239C" modified="2025-10-08" version="1">MARIFSNSINSKLKHENPLISLKSLLFEALSDILPDDFSKISDINLRRIRLSDGSDKAPEQKAVHYRPFYPQKDAPNRDGLFEEKSEQKNQFVSIRFSLNCDEDERTLKRIAKKLLFSNRGEFCNHKLLSLFNEVRTTDLETPFELSDFRWHQMALETPPNLLPWLSEEQKTLLGISDYSRFKDDPVVYVEDDLFSEYWKDVGCGLPEEKSARCDFNMYTSNYFIMMQCHNALLKLTRSVFCQLSKKKKTKRRFTMLRAPHIFGDAKDHIEETVMHRVYTFVVPDSLRHKIDRAAQEVIALGCDVKLKWSEELD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGE1</accession>
    <name>A0ABV2AGE1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000667</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000118">
        <property type="protein sequence ID" value="MES1918753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="199" mass="22971" checksum="5110750AD99D6203" modified="2025-10-08" version="1">MEKSRSQLSSLLVLNSVYPNKLEEQPFGNDNNIKELINKGDSSLSEEFHRRRINHELSRRSLSSIKNMSSSSSYIDKINSEGIKLFKEEANSGGTFQLLETKGIFKKWIEVTIKYKTDENGSYLIIDKGSSKQLINVNDLNFHAKTHKEKKLPKKVLQNPDLFICLVSKKDKKYLLAHDKNQRFAWTKGLMMIKEGKYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGG6</accession>
    <name>A0ABV2AGG6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FACT complex subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">SPT16_1</name>
        <name evidence="5" type="ORF">MHBO_000689</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the FACT complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M24 family. SPT16 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000123">
        <property type="protein sequence ID" value="MES1918780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.210">
        <property type="entry name" value="FACT complex subunit Spt16p/Cdc68p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056595">
        <property type="entry name" value="Fact-SPT16_PH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013953">
        <property type="entry name" value="FACT_SPT16_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013719">
        <property type="entry name" value="RTT106/SPT16-like_middle_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040258">
        <property type="entry name" value="Spt16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13980">
        <property type="entry name" value="CDC68 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13980:SF15">
        <property type="entry name" value="FACT COMPLEX SUBUNIT SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24824">
        <property type="entry name" value="PH_SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08512">
        <property type="entry name" value="Rttp106-like_middle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08644">
        <property type="entry name" value="SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01287">
        <property type="entry name" value="Rtt106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01286">
        <property type="entry name" value="SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0158">Chromosome</keyword>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="FACT complex subunit SPT16 middle" evidence="3">
        <location>
            <begin position="21"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Histone chaperone RTT106/FACT complex subunit SPT16-like middle" evidence="4">
        <location>
            <begin position="288"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="409"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="418"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="441"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="454" mass="52295" checksum="554E0B3C27223AFF" modified="2025-10-08" version="1">MKKISYEDNSLFPPVSNYFKIQTDSVSDSILLPISGALYPIHVDFVKNMQLSRDDNTNLLQISLDSKTPENNFGEIFVKEIILRSKSNKNFELVVKRTKEIKKKLLRKKVTETGKQLNSNEALILTKNQEKVPKINNLKIRPSLGGKRSSIGFIEAHKNGFLFSLNSAKSKPSRIEILYKNVKHAFFQPAANTASVLLHLHLEEPLLLSRKTKDIQFYIDVVESSQNIEKNMKGDQEAIREEQRERFYKKKLNKIFAHFAKSVTKICSNVESGVEKLTFDVPCEELKFIGVPDRSTVNIYPTANCLVSIEEYPPFVLPLSDVEIAHFERVQFQIKHFDVVFIMKDLKSYKRIDAIPIKHLSQIRRFLRDANIIYFTGSINLDWEKILKEINSDLKEFWEKGGWRFLDDAENADKSSSGEESALEGESFNPSDENYSKESYSDEESDDIEESEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR0</accession>
    <name>A0ABV2AGR0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000583</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000099">
        <property type="protein sequence ID" value="MES1918644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051826">
        <property type="entry name" value="E3_ubiquitin-ligase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22765">
        <property type="entry name" value="RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="3">
        <location>
            <begin position="54"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12069" checksum="87E15A946B3A1839" modified="2025-10-08" version="1">MNTDETIGVIIGSLIVALILVTFLVFLYKGILSRMKNAKYYKLVNLISHLEESCSVCLNDYSSKRPPYMLACGHIFHRECILRWAITNKPTCPYCRKIYEKFED</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW1</accession>
    <name>A0ABV2AGW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000578</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000098">
        <property type="protein sequence ID" value="MES1918638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1082" mass="127099" checksum="72DA608041385136" modified="2025-10-08" version="1">MTMERPEINQFLETLKPKNKKFSEISSVENSQFVQLVDILKNGSERNRLFTALLIENSIKEHYKKINFVEKSELKAHVLALYENEESPKVLLRIQSIILRIKSLEYFESGWSELFEFIVKATLSKKHEFVKSVLGLLKQLLSMFEEEFEDNFDVISAIHMNFLFSATYFKNAIDLMPCLISMTEKILSKNTKEPNDWNRIRLMEFQFITLLRRIKKLDEMSKSGEVPITYALEGIRHFIDSRLPYFEKYQEELFENLFLISKRSVKKNTNDNLIEKSLAKLLSWILNSQKIDVATESNMLKILSISLKILMNEVFRDCTQTKFVGLDLTYTFCIKSGYSSQNLIQSLSSMYTFEQPVVVFVILKVLSYIPKLHQDVTLSTDLLNLLNIGAHQMDIFDYANSTESSQLNFQIALISIEILTAFQKLIVEFKKQDFVIKIFSKVCKHLIFESYNKTPLSRALLQLGFKYLASAQIGTQTDFLGNLVEKFGRLIEDDNALEKATEIIRDIFSFNLAIFGEPKTCKRDENAFLTISTRCAVFMETIFFKYCEKIVEATHEESKMDELAKPNCDELQCYKLMAVLVANPYLKDKFDSKRIFCILIDRAKTWIANKEKKNLSLNFEILLKTLEFRNLPDETEYEFFFNFLRETIEKMADNKIVFPTKTITSIEENLLHMESLVVSSADVIERFCEKYYNRENNEKALVNALRSLKVVAKLMGDHFYKHSFQIMETMCKISQKSWIFNIVLFDTIYDILKITAKISFSKDKEKLSNTFKFLLKNVLDETNDKVFVFKLSKIRLLLNSDDRVALNDEIVALFGKLIANDTVVQNKIAKSFYSDTTDEFYIRENFLLIDHVVYELLLKFFSLNHEKGNETQVKVFLNKVLLTLIDKDCLFEKKIIIFGFLGQINFSFKSLNPNLMQRILKLLLDTCLEKCDFAKKNNAFYCLQEFIKDESVDFKEKSRYFFNTIVETMLEVKESSRKKDLFEMAWLLLKRFKIVNVKDNLMLDFLSNIPENFRFRIKPRFKQFLLYLLENLTNRKLELKEVKVKNIILILIEKIKEMERTDKKMRMDLEKIENGQTMIKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH06</accession>
    <name>A0ABV2AH06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">NAD kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000818</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000157">
        <property type="protein sequence ID" value="MES1918932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="entry name" value="Probable inorganic polyphosphate/atp-NAD kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.30">
        <property type="entry name" value="Probable inorganic polyphosphate/atp-NAD kinase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00361">
        <property type="entry name" value="NAD_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017437">
        <property type="entry name" value="ATP-NAD_kinase_PpnK-typ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002504">
        <property type="entry name" value="NADK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20275">
        <property type="entry name" value="NAD KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20275:SF0">
        <property type="entry name" value="NAD KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01513">
        <property type="entry name" value="NAD_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20143">
        <property type="entry name" value="NAD_kinase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="NAD kinase/diacylglycerol kinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="307" mass="34940" checksum="A6477AA7F74FD2ED" modified="2025-10-08" version="1">MIANGLKKTKYLLIIKKFNDKFNVDRIKKMAENISTKHSVRIYVEPSFYKRNPLKQFNCFNEKIADKIDLCISIGGDGTILHLNSLFQKISVPPVLAFSTGHLGFLINFHQNDLEKIVEHYLIKPSNFSISPLFTLVCTKKRHGKLEKSYRVLNEITIERGEWLLPIPIEIFVNGKILTKTKADGIIVSTPTGSTAYSMSAGGSLVSPMVSAILITPICPHTLSFRPLIVPLETEIKIRVPKFVCSQSDDASAYLTFDGQIREKLKDDDEIIIKASETRFPIVRKEKEESTWYQSLRDKLHWNSQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHB0</accession>
    <name>A0ABV2AHB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000941</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000191">
        <property type="protein sequence ID" value="MES1919070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012098">
        <property type="entry name" value="SND3_fun"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28112">
        <property type="entry name" value="SRP-INDEPENDENT TARGETING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28112:SF1">
        <property type="entry name" value="SRP-INDEPENDENT TARGETING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10032">
        <property type="entry name" value="Pho88"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16269" checksum="240F7CD897C814F8" modified="2025-10-08" version="1">MSLVVPFYIRILLPLFITFSIRGVEFTDRNILLIRIMYAFSILLQLAVYYYIYRRVMTIKSTATVKVPKQQGVLSAASGSSNNKKPEFELKKEWEYDYGILRAAVKSLFFSSVISTLIHVYFNIIPSILIPPCYFNFYLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHB1</accession>
    <name>A0ABV2AHB1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">VWFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000774</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000147">
        <property type="protein sequence ID" value="MES1918879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047418569" description="VWFA domain-containing protein" evidence="1">
        <location>
            <begin position="16"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="228" mass="26724" checksum="F2C11EFC35941AAE" modified="2025-10-08" version="1">MISLFYFTLISFSSSLKNPDQNCRYNLIVCLDISKHIDASQIEDLKSATLDAINLSRRLNQNSFEDFQLLLYADKVKAVPKYVYSVDFNDDYTDFSFGFQRQYTDLCDKYKFFQKNFLEQITLINRPAYLHKCMEESLNHKKSGMKNVLSVVTTYISIFDYSDIKKARDNLLNDGFHIEAVTLDAVTANLFENLTDQDYIYSFDESMGEKQYSYNKIYEQSMCEAFDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD1</accession>
    <name>A0ABV2AHD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Developmentally-regulated G-protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DRG3</name>
        <name evidence="2" type="ORF">MHBO_000953</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000195">
        <property type="protein sequence ID" value="MES1919086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045001">
        <property type="entry name" value="DRG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43127">
        <property type="entry name" value="DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="TGS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGS" evidence="1">
        <location>
            <begin position="18"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9642" checksum="121E060C6B816262" modified="2025-10-08" version="1">MFRSLPDFEEPVILRSKYRTVKDFCLTIHKDLMSDFKRFQFKFDSALVWGTSAKYYPQTVGKNHRLLDEDVIQIVKGLPSAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD7</accession>
    <name>A0ABV2AHD7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000895</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000179">
        <property type="protein sequence ID" value="MES1919017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050620">
        <property type="entry name" value="Thioredoxin_H-type-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438:SF468">
        <property type="entry name" value="THIOREDOXIN-1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="9"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="16680" checksum="26C349D0C71CCDCA" modified="2025-10-08" version="1">MEKLRTVRSEKELEELINSSRKLVVVYLMAPWCLPCIKISNKIGQLDSFRGDIDLVRINIDDYDRYNGCKILPIFLIFKNKKKIRSFYGSNIEKVKLILGEYTSSDFFLFFKFDFDVFFKFIICIFSNFVFVILFTFVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHL6</accession>
    <name>A0ABV2AHL6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001019</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein disulfide isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000211">
        <property type="protein sequence ID" value="MES1919155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02961">
        <property type="entry name" value="PDI_a_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051063">
        <property type="entry name" value="PDI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45672">
        <property type="entry name" value="PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047497655" description="Thioredoxin domain-containing protein" evidence="2">
        <location>
            <begin position="20"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="12"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10226" checksum="83C166F264D9F022" modified="2025-10-08" version="1" fragment="single">MTQNTLFVILSILLGFVTSEVTLIKTEKEFKELIKNENALVKFYAPWCGHCKALAPEYVQAAKDLMADKVKDVKMVEGHSIFKPLNFDSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM2</accession>
    <name>A0ABV2AHM2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">G-protein signaling regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">RGS1</name>
        <name evidence="3" type="ORF">MHBO_000669</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000119">
        <property type="protein sequence ID" value="MES1918757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.167.10">
        <property type="entry name" value="Regulator of G-protein Signalling 4, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016137">
        <property type="entry name" value="RGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036305">
        <property type="entry name" value="RGS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044926">
        <property type="entry name" value="RGS_subdomain_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845:SF192">
        <property type="entry name" value="DOUBLE HIT, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10845">
        <property type="entry name" value="REGULATOR OF G PROTEIN SIGNALING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00615">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01301">
        <property type="entry name" value="RGSPROTEIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00315">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48097">
        <property type="entry name" value="Regulator of G-protein signaling, RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50132">
        <property type="entry name" value="RGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="225"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="RGS" evidence="2">
        <location>
            <begin position="271"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="387" mass="45371" checksum="2A312BDB78FD42F1" modified="2025-10-08" version="1">MKDFYREWSLIYLIFGVATATPLYFLLFERFEFQPLKTRSIFFTYVFIAAYESFGALTLILLYFPTMPCYVFFVIDQVIVVFMIHMMAFRSLGAYVFYLAAEEALKAKTFQSRKWYVRYNPSKRPLPFILLFVFTFIPLTTPIILFLAFKDNVYDTFYSCYLNFKEVFYVYSVIALDSVFIIFIGYKILSYNDSLNIKQELIYSGCVCITGLLLEILLMETNFSIITVNTTIMLVTFLLRIIIAVFPIVKSFDEQRIILTNKNSSLSPKKRLKILFENPVNKALFKKHLQSEFSVENILFYDAVQDMKRKESKYSEEDLRKAIDFIYIKYVEPNADFQVNISSKQRKNVQNKIDVLDSTIFDAAAEEIFTLMAVDSLPRFNPENNST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN6</accession>
    <name>A0ABV2AHN6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Prenyltransferase alpha-alpha toroid domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_001043</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein prenyltransferase subunit beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000219">
        <property type="protein sequence ID" value="MES1919180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045089">
        <property type="entry name" value="PGGT1B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001330">
        <property type="entry name" value="Prenyltrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774">
        <property type="entry name" value="GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774:SF6">
        <property type="entry name" value="PROTEIN FARNESYLTRANSFERASE SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00432">
        <property type="entry name" value="Prenyltrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Prenyltransferase alpha-alpha toroid" evidence="8">
        <location>
            <begin position="3"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="26366" checksum="7B09C2570FAC874F" modified="2025-10-08" version="1">MIIGTPEALELIDRKSILDFFFRLKKDNGSFAVNIGGECDVRGTYTVISTAALLGLLTPELTDGVAEWVASCQTYEGGIAGEPGDEAHGGYSFCGLATLIILEKQNSIALEKLLDWAVKRQMTVEGGFQGRTNKLVDGCYSFWVGAIPILIQSTLKPEDKTKNGCFDGDAAAKYILGACQCTINGGFRDKPGIMCDLNHTCYCLSGLCASARNMDNKALFGNLGIAEIDFVHNINKGKISPFWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX0</accession>
    <name>A0ABV2AHX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000911</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000183">
        <property type="protein sequence ID" value="MES1919034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10497" checksum="CB201BF489C85E61" modified="2025-10-08" version="1">MGQTKSKYVMEMEPDSSFSHADPDEAIEMFEEDSRQVPSVVENVEPFPASPKAFEEPLQAGKETDKAVKGKVVNTNPDAKVKYPSVFIWVSTFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHX4</accession>
    <name>A0ABV2AHX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000244">
        <property type="protein sequence ID" value="MES1919276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11881" checksum="B3262CEBD7150B27" modified="2025-10-08" version="1">MDKLKEKMKVPKYIVEHKSMKKIFDLTTIDPISNYVVLIYYALAIMASLVVIYILSNLFFFIIKHFCVCQYQQLQRKQTDDKQQFFNEQVLNDTIDDIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI27</accession>
    <name>A0ABV2AI27_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001189</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000260">
        <property type="protein sequence ID" value="MES1919341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15357" checksum="D7310FA595CB514E" modified="2025-10-08" version="1">MFGKVRKLSKIKKSQNFLFVNAKRTVMDQKNFTNNTSLNTECGFYWGYITQAPAYIRNQAYMKWILFYGAVYYMYTYSTAKEHSANADLEQRYRNGQVCDHCGSCHTSYICPHISEYPNGIDPITMRPRPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI32</accession>
    <name>A0ABV2AI32_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Telomerase Cajal body protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">WRAP53</name>
        <name evidence="2" type="ORF">MHBO_001180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000257">
        <property type="protein sequence ID" value="MES1919330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051150">
        <property type="entry name" value="SWT21/TCAB1_mRNA_Telomere"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13211">
        <property type="entry name" value="TELOMERASE CAJAL BODY PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13211:SF0">
        <property type="entry name" value="TELOMERASE CAJAL BODY PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="341"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="346"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="378" mass="42106" checksum="1A4592CE0317AA48" modified="2025-10-08" version="1" fragment="single">KNCIMALPPKCRSEDQFKANFPQRSCWSPDGLCFSTFSEEKKLFVFETPQSLLLGKKEHNTNDLKPVLTMPEQGSVYDMAWSPAMSSRHPETCLLFSCSRGRPIHAFDAFNGKLISSYCTFDANEETATAFSIGFSPAGDQFVCGHRGFMSKFSVSEPGNKAIKLKLPSQNGKLAKNAISTIAAADASGKIWAVGDYKGKTFIFDEKSGKATIDFDWDTNRNGIWKVDMTDDFSYLLSSARKQSEILMWDCRFAAKPVAWFERPVHTIGNQRMGFCKSTDGKYLFTSSADGIIRKFDLYAAEVCPKPEKCFRTPFEFVNDIDLNKLSENLAVLSVGKRSFGQNEYSSSSDDSSSSKPGISKGNKILTKNGLYIFDFSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ3</accession>
    <name>A0ABV2AIQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">60S ribosomal protein L23</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPL23</name>
        <name evidence="5" type="ORF">MHBO_001219</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000270">
        <property type="protein sequence ID" value="MES1919374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00337">
        <property type="entry name" value="Ribosomal_uL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="entry name" value="Ribosomal protein L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01367">
        <property type="entry name" value="Ribosomal_uL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_uL14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_uL14_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761">
        <property type="entry name" value="50S/60S RIBOSOMAL PROTEIN L14/L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761:SF8">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01374">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="Ribosomal protein L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="140" mass="14875" checksum="EE351D5E2F0E2B41" modified="2025-10-08" version="1">MSKRAKKGAQGNKLKTSNGLPVGALINCADNSGAKNLCIIGVLGRSGRMNRLNSASVGDLVVCTVKKGVPKLRKKVFRAVVTRQRKMFRRENGGFVCFEDNAGVLLNTEKTMLGSVINGPVAKEAADLWPKIASAASSIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIS3</accession>
    <name>A0ABV2AIS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyltransferase 64 protein C4, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">EPC1</name>
        <name evidence="2" type="ORF">MHBO_001229</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000275">
        <property type="protein sequence ID" value="MES1919389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="26"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="373" mass="44035" checksum="2E8FD9650B1B38B0" modified="2025-10-08" version="1">MENKVVENTVLTIVRLKPKKIPPQKNNDEKSQIDVKDNKTKETVKESIPIPLAQIKKRTRAKRSWQCPKFYIKNSLASGSSLPTIMDFYDMSSDDLEWLKSVRTRNKDLKLDKIQMSKLIEYFEHFYRIDDSIPNESKSEILSLSKAKKIGFIFGIKNEIKKLLKPLIRCYIKRPEQDDPSIYTSFRPRKISRRASTRSSNRTFRNDREILVKVKILKKDLTHLLKLLSLVRLREEKKLEQMLYDALIFDRKLLITKYGNELYRKITKNENFLNEKSILKPVLPYEAFFSFNGKFKKECALGDIYKTILQTREDNSLLKSIPNFNKTLVEKQNLGTFEKSVLFRLDVNGNLICDLFYKTDQKTNYFNEEILNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX6</accession>
    <name>A0ABV2AIX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001403</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000337">
        <property type="protein sequence ID" value="MES1919603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13393" checksum="0EF9F503387EAD3C" modified="2025-10-08" version="1">MFTKSGVLKLTGFGKSVDLTRDNLHIREKESTLYLAPELEEGYVTVKSPYWNLGRILNEISADIVLSPKTTCDKEYTEFVNGLKKRSTADRIGFYDPRLMPKFLETKREKLFINLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ0</accession>
    <name>A0ABV2AIZ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001416</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000342">
        <property type="protein sequence ID" value="MES1919618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050817">
        <property type="entry name" value="DjlA_DnaK_co-chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24074">
        <property type="entry name" value="CO-CHAPERONE PROTEIN DJLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="256"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="329" mass="38658" checksum="449B1A3937A94FC3" modified="2025-10-08" version="1">MQIYASNKIFEPFTQILKGFDIKKNECKKLSASFLKTNKAHLEQINFRPSTLWPDILKNVEEIEKDKAKIKLLDKLNAHEVKIRDMRIEVMARKAKLIYVPAYVINYDCGPFKNNIFLLNGLDKDKMIGIKTFNPFKIGSAVLAINSIIFYTLSGFLITDIVAVSLLTIIPAVFSGWLSRLFSYRQTQKLRKDRKERNENLKTIESSRKNIEFDDEESFGYFSNLFNEKIFLQNRLFDKFVEQKRAKIRMALDKKGYYALLGLDPSTRKITQEEVHSAFKKKARTLHPDRFTKLTEKEIVVRNEVFKEIIKAYQILKDEKKRSEYDRLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ5</accession>
    <name>A0ABV2AIZ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Bromo domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001452</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000358">
        <property type="protein sequence ID" value="MES1919660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04369">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45926">
        <property type="entry name" value="OSJNBA0053K19.4 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00503">
        <property type="entry name" value="BROMODOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bromo" evidence="4">
        <location>
            <begin position="46"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="162"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="173"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="25839" checksum="832534A5A7EB999C" modified="2025-10-08" version="1">MFLIFYNIKKQSREWFSVKNVPEEEHNFYLNESIKQDCILILDRISKEDANNLFLNPVDLKLFPLYTRFIEKPIDLTTVKKKLNNGVYRETTDFSDDVRQIWLNCELFNNPGDVFSKSAKICSKLFEDLWARLLKKLDNFVRLEEENTYGFDRIMNKSSNSQLNKEISQNESKNVDKISDKEKMEIEQKAKAERLKLKNELIKMSQNNVDSISSATESE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ25</accession>
    <name>A0ABV2AJ25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001456</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000359">
        <property type="protein sequence ID" value="MES1919665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18489" checksum="FA09D101E08BFD6B" modified="2025-10-08" version="1">MLINVEFKNLDTKKAKGKLKSAIYNFLTKNGVQSNDDFFVDEFSFSSEDAFKIIKNYDFGAKTVSFPDLGEVNSIFSDCSDINDLFDGIKMFEEITTSKPKLTHVYLRPYELGSVNFAELFNTIRENELENAFKFAKLRQKVNNVLTHNNQYSIDQFKVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ29</accession>
    <name>A0ABV2AJ29_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Programmed cell death protein 4, variant 2</fullName>
            <ecNumber evidence="8">3.2.1.106</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">PDCD4</name>
        <name evidence="8" type="ORF">MHBO_001111</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PDCD4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.106" evidence="8"/>
    <dbReference type="EMBL" id="JBDODL010000239">
        <property type="protein sequence ID" value="MES1919252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004573">
        <property type="term" value="F:Glc3Man9GlcNAc2 oligosaccharide glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003891">
        <property type="entry name" value="Initiation_fac_eIF4g_MI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039778">
        <property type="entry name" value="PDCD4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12626">
        <property type="entry name" value="PROGRAMMED CELL DEATH 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12626:SF0">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02847">
        <property type="entry name" value="MA3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00544">
        <property type="entry name" value="MA3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51366">
        <property type="entry name" value="MI"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="MI" evidence="7">
        <location>
            <begin position="27"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="MI" evidence="7">
        <location>
            <begin position="163"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="305"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="306"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="340" mass="38829" checksum="CEA7A5AF9680739C" modified="2025-10-08" version="1">MSRSVRRGSVSPGSKELFAMKMKGLQDFKVRVSRIVKDYLIANDYEDFVSRINELEPKKSEIEQIPKILMSISFDRNDNERKVVSDLIVKLVMNKVIKEKDLGMGFSLLLSQVPDLRLDVPNVVQYLEYFVDSFVNNKVLKYGDSSKFVEVLSIYSGSNPRKTIKKIVEKIIKNYFVSGELEECQRAIEEINDTNLYPLVVKYVVSLSFDFGASQRELVSQLFAKVVDDHVETKFIQQKHLGEGFILLLNNAEDLSKDVPEVFDYLSFFIARAISDESLPRSFVKNSAEKTTNDALIVATFTIQGTRKRRPAHPHGKQHGETALRLGNQHRRSGRDQVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA7</accession>
    <name>A0ABV2AJA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ATP-binding cassette sub- B member 7, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ABCB7</name>
        <name evidence="8" type="ORF">MHBO_001546</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000395">
        <property type="protein sequence ID" value="MES1919773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18582">
        <property type="entry name" value="ABC_6TM_ATM1_ABCB7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221:SF402">
        <property type="entry name" value="IRON-SULFUR CLUSTERS TRANSPORTER ABCB7, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="67"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="185"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="217"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="71"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="31908" checksum="7B15EFE19F3B5C8A" modified="2025-10-08" version="1">MFSRKFLKNVSANLMNKKHGSNYLNFGRPRFLFSFARKKERKAPKSENEAVFRFVYKSLRPTNWYDVMRIVIAFSCLVSSKVIAVQVPFLFKHAVDSLNAYENMGGVSQPFLGPIAILVSWGILRTTSSLLYELRSAIFNPMAQNAVRSLTCKTFSHLLKMDYAYLLTQNTGAISRAIDRGQRSIYYIINSTIFNILPTILQIALVCYLLGNSCGSTFSFITMGTIGVYFLFTLSVTEWRTKLRKELNRLDSVASSKAIDTIMNFETIKVQINTIKVFQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC1</accession>
    <name>A0ABV2AJC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transforming growth factor beta-1-induced transcript 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">TGFB1I1_1</name>
        <name evidence="7" type="ORF">MHBO_001540</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000393">
        <property type="protein sequence ID" value="MES1919766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08368">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24205">
        <property type="entry name" value="FOUR AND A HALF LIM DOMAINS PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24205:SF16">
        <property type="entry name" value="GH01042P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00132">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0440">LIM domain</keyword>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LIM zinc-binding" evidence="6">
        <location>
            <begin position="74"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="LIM zinc-binding" evidence="6">
        <location>
            <begin position="134"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="LIM zinc-binding" evidence="6">
        <location>
            <begin position="221"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="269" mass="31184" checksum="39F94463A5EA00B2" modified="2025-10-08" version="1">METLPFRAKGIKSLLDQNNIEIVKPGNEYTVKGITDTKWRINNCNNFYWVDKSYLEFYKKMVQIGPGNRNFFEKFCIFCDRPIESKYLIAAGENFHKECAECSECKKDLREKVFRKINGIVYCDQCDLLHNGPNCASCGGIITSQYLKALGKSWHENHFVCYKCSEPLKREFGLVEEKPICTKCQYEDTPKCKICEEMSSMRINGENFCEKHGKEKEEGKPFCFVCKKDINGKYLKVSQKDIHPQCLKCSKCSADLFGKLYKEKSGKIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK16</accession>
    <name>A0ABV2AK16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000378">
        <property type="protein sequence ID" value="MES1919718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="22618" checksum="CCA6E404DDF331DA" modified="2025-10-08" version="1">MKNLLKINKRHFIENYLKYIRMRSRINMIENIKKFECLNGHCMGTYCQTDNPTKTKLVLHIENEIYRVYAINFIGIFENIHLGNKSDKFIYKKLKQIMAKIEESMRQVSIHCESEDFFIGGKIFSFRKSKHGKMIETGCLLVNNILSRNDFCVFEADPSSYDEITCTGDSYTNHMISNYKMAVNFIANKFNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK44</accession>
    <name>A0ABV2AK44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001600</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000418">
        <property type="protein sequence ID" value="MES1919844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BZIP" evidence="2">
        <location>
            <begin position="39"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="36"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13138" checksum="F42836402ED75B20" modified="2025-10-08" version="1">MSQSKVYLEPILTENDKGEAIIVSAYTRRQIKTYPGESHEKRCERLKRNFETARKNRQTQKKVIESLKARARLLKDENEKIRSEVSYSEVQKTMDHNNYAKSLDVLNIFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK48</accession>
    <name>A0ABV2AK48_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">protein-histidine N-methyltransferase</fullName>
            <ecNumber evidence="3">2.1.1.85</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001771</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the methyltransferase superfamily. METTL18 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.85" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010000490">
        <property type="protein sequence ID" value="MES1920045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019410">
        <property type="entry name" value="Methyltransf_16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14614">
        <property type="entry name" value="HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14614:SF39">
        <property type="entry name" value="HISTIDINE PROTEIN METHYLTRANSFERASE 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10294">
        <property type="entry name" value="Methyltransf_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00038126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="240" mass="27668" checksum="3D23F8A38419DEB7" modified="2025-10-08" version="1">MAKTANSKETTKFRTLQIKNYSFKYLRKPEKHFNKNSDFSELKKIIKYRDIKEGLYEGGFKLWEGTIDLLEFLITSKFDFDGKTVLDLGCGHGLLGIWAMKNKAKLVYLQDFNENVLRIATKKNIELNKCSNKDFELVAGDWSNKKFLGKLKKNKFDVILTSETIYTPKNEKLVIKWIHKLLKRNGTAFVSAKRFYFGTGGSFLSFKALCSPSKLDAEDVKCRCDGKSNIRQILKITKTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK72</accession>
    <name>A0ABV2AK72_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Metal transporter cnnm2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CNNM2</name>
        <name evidence="6" type="ORF">MHBO_001622</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000428">
        <property type="protein sequence ID" value="MES1919869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045095">
        <property type="entry name" value="ACDP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002550">
        <property type="entry name" value="CNNM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12064">
        <property type="entry name" value="METAL TRANSPORTER CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12064:SF94">
        <property type="entry name" value="UNEXTENDED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01595">
        <property type="entry name" value="CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="cAMP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51846">
        <property type="entry name" value="CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1 3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="44"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="101"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="130"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="CNNM transmembrane" evidence="5">
        <location>
            <begin position="39"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="4">
        <location>
            <begin position="545"/>
            <end position="637"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="347"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="347"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="362"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="637" mass="71300" checksum="94666DB487AFCCE7" modified="2025-10-08" version="1">MSLADICNAVEGLANCKLEDPSCLSIRTIASKCKINADPLIPRWALAICVGILVAFSGMLAGLTLGLFSLDISELRVLKESSRPNIRRYAKRILFVRKHGNWLLCTLLIGNVGVNVALTVLSDDLFNNNPALSFLLSSTLIAFFGEILPQAVCTRWALSIGYYCVPFVVVVMFLLCPLAWPLGKFFDKTLGKEIGMIFTNDELKHLINMHVKTAGAELCEEQGRIINGALDFFKLTVDEVLTPWHHVFCLRDSTRLTFGVLLDVFKTGFSRIPVINRTGHAVGLLFVKDLVLIDPEDATPVSSLLRLYGRNLEFVRSSDPLKSIMATFVSGRSHLAVVVSEDGEPDEKDKIVSARKARTDSSKTSSESSSCSDDSGVFSKLKRLFRHDRSGSKYLSKGIKESLEEVSIEETAEMRRLRERKPVGIVCLEDMVEKILDLEIVDETDVYVNPKEKNLVNRAPFDVSKLSVFDYRRTLPKHYLVPPEVTAAAHHLFASLSKKLGDSKNEYFDLKTTKLLLRLSKVEEVLVEHLSLDECDREKDVSQGGSSLLKRGENASKCLIILDGRVEVQDEDNNKKNLKRWGIVGEDALLNELEGRGSYVSVVDAHVVLNSRVVRPNREDLREILNFRAEQFEKRVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKK1</accession>
    <name>A0ABV2AKK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arf GTPase arf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ARF1</name>
        <name evidence="4" type="ORF">MHBO_001885</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the small GTPase superfamily. Arf family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000542">
        <property type="protein sequence ID" value="MES1920188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024156">
        <property type="entry name" value="Small_GTPase_ARF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006689">
        <property type="entry name" value="Small_GTPase_ARF/SAR"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11711">
        <property type="entry name" value="ADP RIBOSYLATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00025">
        <property type="entry name" value="Arf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00328">
        <property type="entry name" value="SAR1GTPBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00178">
        <property type="entry name" value="SAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="170" mass="18819" checksum="0A893C4F8BD8509D" modified="2025-10-08" version="1">MGNAPHKSAKKVILIGPEGSGKSTVFNYLTKGRHKEPEIDLKFSQEFVHADKAEISVWDMPGNPVDRHMWRHHFQQCYAIVFVVDSSNPEKLGEARALLQGLQREDSLENSRLLVLANKQDKANAIKAAELSKLLRLADLQMPFKIVPCVAASGKGVDSGIELLLGSDFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL36</accession>
    <name>A0ABV2AL36_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002063</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000641">
        <property type="protein sequence ID" value="MES1920386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="124"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21894" checksum="CA4F93BE0BC6C4A2" modified="2025-10-08" version="1">MTSKNVKQKTLMKKLEKYHQEDLQEALLNMLDQINFDRKALISMILKSGKTRQIIEALERVKGDSLVVNNDVEDMLEDEIQLKNFKSKIDIDQYDPNILVDAETSDSDLTEMFNKKFQISTKKPKLKQKLEESPKKRSHKNGGLDELTSEDGDDWNGKKFENIDKCCLEDLSSEEDVINIRSLQNMPIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALQ7</accession>
    <name>A0ABV2ALQ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000759">
        <property type="protein sequence ID" value="MES1920608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="51"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="41503" checksum="57D03F549750411C" modified="2025-10-08" version="1">MESYLNSSTISLSRLPVFKNITKSRNFEETAVGLKPKHSNVQNYLSFFNEIHCKSEKIDKLKNHLLKLMEEKQILLQITSFEKLFEKVFIEKYRFVFVFQPRVFEARHVLENYVECGYYTPFICCFEYGPFAVFAFHSANNVTMTPLDEALEVDYDNLFRFFIVYLNYLDYCNLEIDRELKNSTIFFDQCNNVILDDFNVSCSMDSFQSRQKNTRIVSRFFENFWGSISNLGLFLKVVERLAALPSNKSIKSIFLMKYFEKNSDRYLPEVFLQQYDKSTKIVTLYLIDGQVYRFNATNPFCLTYLKWNIYITRNFDDSVLVRKNLGSYKYQKTIRGSNSKIFFAVFTYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM06</accession>
    <name>A0ABV2AM06_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">MutS protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">msh-5_2</name>
        <name evidence="6" type="ORF">MHBO_002139</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA mismatch repair MutS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000689">
        <property type="protein sequence ID" value="MES1920474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361:SF20">
        <property type="entry name" value="MUTS PROTEIN HOMOLOG 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair proteins mutS family" evidence="5">
        <location>
            <begin position="62"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15466" checksum="79293C19990AC6EC" modified="2025-10-08" version="1">MSITAIENNLTEPQFKEENGLIIRDGKHPLLSSICDNDFIPNSCIAGKNGLFFNQRKSFINIVTGPNNSGKSVYIKQCGIIAYMAHIGSFVPAKEAIVGRVDMFLNRQFAKTVKTVKDFEQDSDKRRQRFHFVVILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM41</accession>
    <name>A0ABV2AM41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000825">
        <property type="protein sequence ID" value="MES1920725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052575">
        <property type="entry name" value="SSU_processome_comp_20"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17695">
        <property type="entry name" value="SMALL SUBUNIT PROCESSOME COMPONENT 20 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17695:SF11">
        <property type="entry name" value="SMALL SUBUNIT PROCESSOME COMPONENT 20 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="33943" checksum="90006EF46F72B865" modified="2025-10-08" version="1" fragment="single">MVLEVKKAYNKLKKGKNQYKFRSFSDRVKLVNVSILGTKTSQKLEPNETHFISAVRHFSDSEPSTIFSSLKRRLLPLSRSLPLLLLNQKEITFILCDGLLSADTTYCYKPTFSLIAALAQDLKSDFAYVDKALETLIRTADPGRPELLELVFTTICFLFKFLEEKFVRDFAADFRANFFVLLSSPKLHIRKFAAESCAYLMRKTPVAEFRKLLNILFDFDKLNIGAKSTKKFDFYVDGLSSLLFYFVKSPYGDFHSNIRIVVKTIFSNFAKSGDNIIFSIEAIKSFLFKNISPNIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMF7</accession>
    <name>A0ABV2AMF7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inositol-1,4,5-trisphosphate 5-phosphatase 1</fullName>
            <ecNumber evidence="2">3.1.3.36</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">syj1</name>
        <name evidence="2" type="ORF">MHBO_002483</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.36" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000914">
        <property type="protein sequence ID" value="MES1920861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004439">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046985">
        <property type="entry name" value="IP5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000300">
        <property type="entry name" value="IPPc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200">
        <property type="entry name" value="INOSITOL 5-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200:SF300">
        <property type="entry name" value="TYPE II INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22669">
        <property type="entry name" value="Exo_endo_phos2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00128">
        <property type="entry name" value="IPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inositol polyphosphate-related phosphatase" evidence="1">
        <location>
            <begin position="81"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="556" mass="61939" checksum="5D744A5E783D88CE" modified="2025-10-08" version="1">MDISEPLIETDTDTPTFFRNREMVRLLLSEHSALATELYENEQVIAAENDPFGLPPPSTENPPDNLAALFACELEQTTVPKTLKIKVVTFNASGKGPPKELRAVFDTGDADLFAVGLQELVEMRAGSIAASLWSGWEPLLRVWREAIKQSLRKSGLEFVLMADKNMMGLALLVFARKEVARQISGVEVKTVALGVMRTLGNKGSVAVRLNLMDASICFVTSHFASGKTNVDDRNSDFHLSVEKLDFKLNKWDYRIGGALLNSDTVIWFGDLNYRLQLKNESELGYVFSLIDRGELNELAQNDQVLFSPPFQLNNERSRNSVFAEFTEGEIAFAPTYKFVPGTLANYDKSEDGKQRMPAWCDRVLFKSNRLSLLEYDSVSAVRVSDHKPVCALFAARFRSFEPAALADFAARIGAKIGALKKVLRPKLSVFPTALEFAKMYFGVSVSRAIRVRNEGKSVLKVAVEVKCAPGGSAWAAALDRKLCVPLCRSKEARVEFKIDSKVVSRLRVEKSNPVLRAQIRLKIERGEDVVVQVKAVYMRSSFGCPLDFLCRVLQCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN20</accession>
    <name>A0ABV2AN20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002649</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001052">
        <property type="protein sequence ID" value="MES1921051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045571093" evidence="1">
        <location>
            <begin position="16"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13791" checksum="EC51530F8E27C3AC" modified="2025-10-08" version="1">MTIILFIATAKFAFSCVMNIEFCVKDKTFNNLAKNVYLDIVDFNEGYVDAMAILYGVNSGVAMISFTFEDVDSIDDVAISLLNLALNVETGFKTIIVPFNDENRRFRTETQCFRLFGQNKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN46</accession>
    <name>A0ABV2AN46_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Guanine nucleotide-binding protein subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">GPA1_1</name>
        <name evidence="5" type="ORF">MHBO_002541</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000966">
        <property type="protein sequence ID" value="MES1920934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.400.10">
        <property type="entry name" value="GI Alpha 1, domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001019">
        <property type="entry name" value="Gprotein_alpha_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011025">
        <property type="entry name" value="GproteinA_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218">
        <property type="entry name" value="GTP-BINDING PROTEIN ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10218:SF302">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-5 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00503">
        <property type="entry name" value="G-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00318">
        <property type="entry name" value="GPROTEINA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00275">
        <property type="entry name" value="G_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47895">
        <property type="entry name" value="Transducin (alpha subunit), insertion domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51882">
        <property type="entry name" value="G_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0807">Transducer</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="35669" checksum="087AE31F9388AB68" modified="2025-10-08" version="1">MFTTKSDMLDFNDSIIENLFELLRTVLKMCYELGEYTDEDGNYYDCRISEELEADVQIIFSFHSILIDSDTLKSIKRLIKDDGFITVSKQLRHLYHVSDGCDYFLEHLDRIADEKYVPTFTDIKYCRDRTIGVTHEEVSYEFHGKQIDIDIFDVGGQRAERKAWQNVFANTSALYFFVAISEYAMKCIEDDVTNRICEALSVLRILSEAPVFATTPMLIVVTKSDQLKAKLDEGEKFHLEPPESGIASFEPYRGDNTLEDIQQYIEDICRAQVKGDKKVIVVFKNLLDDNVTFRDEFDQLLDAVEALKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN50</accession>
    <name>A0ABV2AN50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001076">
        <property type="protein sequence ID" value="MES1921092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="223" mass="26220" checksum="F1B06B1320E53867" modified="2025-10-08" version="1">MNLCNASFHKRKLDLLYPYQRRVLRQIIIMSNFLVHSSIYLTNEIDFDRTVNFDPSGTAIFNLVQCEYVEEPDSETLKKHCIFLLRSINTIFFCKMTSVVQSLAEKIRHNLLNGSYLFDCLSLDPNADQSEFMFGLNVENNFYIYDNTFQPLSMCNVADNQHLVGPINSKFMINVRIFGKNSKPLFDFIICNNILFDQIFDDMKFSYVLYNRRCVAGRYYLTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN68</accession>
    <name>A0ABV2AN68_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribosomal protein S18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_005309</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bS18 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000853">
        <property type="protein sequence ID" value="MES1920767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.640.10">
        <property type="entry name" value="Ribosomal protein S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001648">
        <property type="entry name" value="Ribosomal_bS18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036870">
        <property type="entry name" value="Ribosomal_bS18_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00165">
        <property type="entry name" value="S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13479">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13479:SF40">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN BS18M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01084">
        <property type="entry name" value="Ribosomal_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00974">
        <property type="entry name" value="RIBOSOMALS18"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46911">
        <property type="entry name" value="Ribosomal protein S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="165" mass="19192" checksum="F4AFA142F6A9CC36" modified="2025-10-08" version="1">MFPKVKGFFIGGKLQTGNLLNSLKRTAFTEERENLLKKKPFNVDNTLKNRLLFPYNPNSPKTPQVIKDLPETFNEKVVEHIDNQSVRKINQLCNLCLNQIQKMKEPSFTTVNVLDNYMNARGKILPRYKTKLCPKHQRKIRKAIINARQLGYLSYTKNVLLDKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN70</accession>
    <name>A0ABV2AN70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002698</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001093">
        <property type="protein sequence ID" value="MES1921115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007788">
        <property type="entry name" value="QCT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05096">
        <property type="entry name" value="Glu_cyclase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11679" checksum="F31E15D765320265" modified="2025-10-08" version="1" fragment="single">MGTISIFKKIIIFLITNKLIKYFVSENTKTILIDDFVKFYHDNTRFKYENGYLYESGGLYGKSILIKYKLGHREPKQRSLLDKNLFSEGITIVNDKIFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ7</accession>
    <name>A0ABV2ANJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002563</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000983">
        <property type="protein sequence ID" value="MES1920963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20435" checksum="DB373543477182ED" modified="2025-10-08" version="1">MNSNKVKQNKKLQIFKVNDEYDDKFFGKVSNDSEDNDSEEVSQEFESNFEESQALKAKIISAETIPDFVQFTNQKCVNLNTGKKTLDIRLLGNSFDRNDQLTIESIPEYWFVSISEGKSHKENQRMTNVVAVSILQFEVLPDCCEKNIKDYQHIEIIGGGSNGAVFKGQNLKLKHLSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANU0</accession>
    <name>A0ABV2ANU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001251">
        <property type="protein sequence ID" value="MES1921330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17570" checksum="C3201284DDDFA8FD" modified="2025-10-08" version="1">MNSKSAWRTQPTLKDNKSKNFRDILSEQKVQEILKNDMAILEKQNSFKKESNDFIESDLALAQKLQVKEDMLFAAMQSTPLIEDRKDPDWAEVTRNELVSKNITVTKHNKHVEGSRYAQKMQGFNGSGNLEGLKVPSSVFNHFQNRMNRKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP06</accession>
    <name>A0ABV2AP06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">FCP1 homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002936</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001317">
        <property type="protein sequence ID" value="MES1921405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013954">
        <property type="entry name" value="PNK3P"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08645">
        <property type="entry name" value="PNK3P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="78" mass="9056" checksum="220D399A5CC38999" modified="2025-10-08" version="1">MGCSNNKNVLKLFPALKNDKTCFVLTNDKKYTSTKVAAFDLDWTLIKPKKGLFVKTKENLMFWDEKVPQKLKKLSDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP31</accession>
    <name>A0ABV2AP31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002968</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001348">
        <property type="protein sequence ID" value="MES1921437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050746">
        <property type="entry name" value="DAACS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958:SF63">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958">
        <property type="entry name" value="SODIUM/DICARBOXYLATE SYMPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00173">
        <property type="entry name" value="EDTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="184"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="193"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="226"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="276"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="288" mass="31444" checksum="0A9D359B69579018" modified="2025-10-08" version="1">MARKNPFKYISHYTSAILTALATASSAAALPLNLEASYRAGIDKNIANFVLPLGSTLNMNGSSIYYPVTILFIGFLYKKPVAFGTQILLSLVTVFVTVGSAPVPSGALVYLTLVSETVGVTLPLQAQSLIWAIDPIMDRILTATNVLGDSFSVALIEVTFKWMIKRRAKKDGKNASDEFKKIATQVNISGEDDSGKPSDGKHPRERSSSALSRTLRRMRRSQQIIEESKRKSVTKPLREFEEKMELSPKSDDDKTAVKTVFDVPVDAQADVGDLPGNKDDGARSDNKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP50</accession>
    <name>A0ABV2AP50_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002796</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001178">
        <property type="protein sequence ID" value="MES1921239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042635">
        <property type="entry name" value="MEGF10/SREC1/2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24043:SF8">
        <property type="entry name" value="EGF-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24043">
        <property type="entry name" value="SCAVENGER RECEPTOR CLASS F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="23077" checksum="B51447819A5FA089" modified="2025-10-08" version="1">MGCDASGVCKGSYCSYGFWGSLCDKTCGKCLVYNGRYECEKKSGKCLNSCETGFYGDSCTFPCSPQCINKQCNGYTGHCDSRGCITRYHGYKCDTKCSSNCVDNICDGYYGKCIKGCNNGFFGHNCTYSCPPNCKNNKCNQDNEECSEGCKPGQFGNDCETPCLQSTFCLHNTCYQNNGSCNQGCIEGWQEPFCNGKIEKKEIAIKHIAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APD9</accession>
    <name>A0ABV2APD9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003069</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001467">
        <property type="protein sequence ID" value="MES1921542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15510" checksum="CF9C9E56C37426C5" modified="2025-10-08" version="1">MRISTKDDLDKHSATLLMLVKQIMLLHSPRQYKLVLDTIFKETPILSKIDKPGLAVIVDFLEGNRPDSVESGSAEERFFKLVSDFESKIETFDETFYIESLQLCVEFARYGFLTLTDTLLIELNEKFVESKMQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APH2</accession>
    <name>A0ABV2APH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003108</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001499">
        <property type="protein sequence ID" value="MES1921576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="377" mass="43714" checksum="33F51B6E8983CF2B" modified="2025-10-08" version="1">MIKENNNTKAVTCRKIDFDDKLEEAYKEGKTWRWFAEKCDHNSVEMSPMGDNLSVEIQCEYPPKELIGICADVDERKISKIANKKDDQLDQSSEIGRKNKKERYVIDQIKIKEDKVFSAALNLIEERLVSLQHVQIAKDETELFQMFTKLEEHFRKEFGHVFKEAHSDVKNSKTKLPISNNESKFGISDNPKKLPICNNAKNAKKMGRKNVSSLPKTKDFVTLYSSPGDEVVDLVRRDILYLRYTEKVLFEWIANHLKAKSVQISQQMLEAAPADTPRSYAMLGALQKLAPSQIWIEQAQRWMPLPVRSAFGYFSEQEVKKMRESLRMQDSWRTEAARGTNEENIFSEMDEAHREDFIKKMGGSNKSDVQKEIEKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ4</accession>
    <name>A0ABV2APJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001287">
        <property type="protein sequence ID" value="MES1921371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6267" checksum="0A76E72DEB3C40CE" modified="2025-10-08" version="1">MAAVIATTEKSESDPFSSALRLISENAKSLSKQRKKMRKEIAAKIIPLSSISFVVRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ5</accession>
    <name>A0ABV2APJ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001301">
        <property type="protein sequence ID" value="MES1921389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9111" checksum="AD43EFAD02C8C0DC" modified="2025-10-08" version="1" fragment="single">MGSAHTYDIRADEKSNKKPNSAESVSVALNEEELSNLDEMTIKLKYENEMKQLESLADKSDLRLGRDAVQLKKARKKKDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APN2</accession>
    <name>A0ABV2APN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003019</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001412">
        <property type="protein sequence ID" value="MES1921489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="Quinoprotein alcohol dehydrogenase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045217208" evidence="1">
        <location>
            <begin position="23"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="299" mass="33808" checksum="76C295B86B4FA5BB" modified="2025-10-08" version="1">MSIQLPPFLIAFLLLCLKAEIAQNTKSELGLFTESTLEKEKIIFRTANDHLKAVDISTGKITWDISPKSLNEQTDKLKNRLVKGADGSLYFTSASSNSSFIHKLPLTIQKLVEKSPFLMEGFYILGSKKTSLLIINIKNGNILFEENIFSKNQNFLEKSLLNDGHLIYAVQSDFFVKIFSFESGKSWNSSLSELRVLEANSVFSNDFYVEMQSDGKTALKNKNKEVVWETFSGIFDAKMTTVYVTDNNKLLKIPIFYGPENNALYKNKNSVAEYLSYLKNIDKNGVPSRVPAIKGFLFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR5</accession>
    <name>A0ABV2APR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003202</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001615">
        <property type="protein sequence ID" value="MES1921673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="154" mass="18084" checksum="762F80096F50AD7B" modified="2025-10-08" version="1">MLDFKKENISNKIAEDLSFFLFINLIDEIPSLQENAATTISKLVKVHERTCRLKCINTLKEYLKFVIKISDDDQMSSDSEHFDQTLYSCGSLGPKLKKGKNVNFEERKNKILNDKSSYWRISVGAIFLFFRMEFDYNSNFADFKYLHQILMKIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT6</accession>
    <name>A0ABV2APT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003077</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001472">
        <property type="protein sequence ID" value="MES1921549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="79" mass="9545" checksum="8E4291804FA824A3" modified="2025-10-08" version="1">MKGLVLVKNSDSPGWCDRILYFSERLEPSNYKSVLNIRNSYHRPVSINFDYTIQFFDEKYDRYCDMLRDKIKNNKQVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ21</accession>
    <name>A0ABV2AQ21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003081</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001473">
        <property type="protein sequence ID" value="MES1921551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="15611" checksum="5708F3DB82EDEC51" modified="2025-10-08" version="1">MEKKLYDDDKSIKELMLTFPRRSVRINLPNDIVEDKTETPKIRKTNKLKSKKIRKIETRKKSFFKNKKAKNSSSRKAKFFKIEKYFPKEYYTWNKPRKQLWKQLGQNPDKYYYLYCAPGQYFNEKLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ57</accession>
    <name>A0ABV2AQ57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003003</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001381">
        <property type="protein sequence ID" value="MES1921472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="22"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="99"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="183"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="237" mass="27695" checksum="6F5E1EE2FFBB8FF3" modified="2025-10-08" version="1" fragment="single">MNTENDELQKGSLRYKMECDRLRERLTEFDQLQVRYNELERRISEALGKAAQSDQLNNKYVEKIKELQDIIGQRDTNIRLLETRNAQMCAADDSVANDIHQYQTTLLAYKQENDRLNTKIIELENRVIELEEDLRTRIEAAKEAAASTAVQIDGLLNDTQKLEAVKISLEGQLRDRETDCDRLTKQLGECEQLRVRCNELERRISEMAELVAERDQRIEQLNIERTDNSDDFSNQTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQJ0</accession>
    <name>A0ABV2AQJ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003473</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001977">
        <property type="protein sequence ID" value="MES1921947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82171">
        <property type="entry name" value="DPP6 N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="286" mass="32105" checksum="EB5D2C44BA20CD32" modified="2025-10-08" version="1" fragment="single">TENDKTHLKLIALGQSINISIIDLTSNRKSLILPKKQILSDFVSTDIAFDGDHKLFISAISTNGKGRIFEASLETKKIVNDWSPNAFLPERLAFGNNLLAVADKKIALFDLNGSSAILRNVFKGHLNKISSLEMSEDGKLIISSSSHMKEHEAMLWSAESRSTEPFSILQCTFPINLAILKNAENPKIKNDEKKSLTSLTVNEDGSASLFWLNFKNGFVQKRSNPIFKLKLSKGRIVFGDLFDRKVVLLTKNGSFFSVEKFVFEKIKLENGQIAKRKRNNFGQNLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL3</accession>
    <name>A0ABV2AQL3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003491</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the dermatopontin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002001">
        <property type="protein sequence ID" value="MES1921966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026645">
        <property type="entry name" value="Dermatopontin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15040:SF1">
        <property type="entry name" value="DERMATOPONTIN-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15040">
        <property type="entry name" value="DERMATOPONTIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14704">
        <property type="entry name" value="DERM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9709" checksum="59ACB410C1315A37" modified="2025-10-08" version="1" fragment="single">ARGPLFLNFYQGKRCAPCISGYVNDYDQAVHFRCPGAGYINGMASYHHNYYEDRRHKFRCCGRRGSRGYYLTINDVIFINQNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQL9</accession>
    <name>A0ABV2AQL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003243</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001668">
        <property type="protein sequence ID" value="MES1921713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="9"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="24070" checksum="112D3746896ADACF" modified="2025-10-08" version="1">MRQTKIIENGNNMNNSNYCNKVEEEEEKDKKYKPTTSESSESYNYYTEHIHHHNIHHYHHHTDRYVEHEHHFYDRKDILHTPTHCDHKSEEKYLGKSFEKGNCEELIYGNNEKNNYFASNEDNSYHFNKNCGEKNFNNNANNFNNESDFNNVNNCNGNNDNETFAKKSYLQKAESEDCSCEEKMRIGNQKKMYFDNNSGCYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM1</accession>
    <name>A0ABV2AQM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003497</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002005">
        <property type="protein sequence ID" value="MES1921970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8203" checksum="A21CD5B9F6F0548B" modified="2025-10-08" version="1">MYGFTGGTPDYLLRSNVQTRRVILHGGESKYSGCVVRQAKHFFYEYVNGNSNYLLYQHVHSFEVNCDKIHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI9</accession>
    <name>A0ABV2ARI9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SF4 helicase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003611</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002205">
        <property type="protein sequence ID" value="MES1922094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007694">
        <property type="entry name" value="DNA_helicase_DnaB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027032">
        <property type="entry name" value="Twinkle-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12873">
        <property type="entry name" value="T7-LIKE MITOCHONDRIAL DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12873:SF0">
        <property type="entry name" value="TWINKLE MTDNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13481">
        <property type="entry name" value="AAA_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51199">
        <property type="entry name" value="SF4_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF4 helicase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="246"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="254"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="273"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="304"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="323" mass="37085" checksum="BD436D6F4E3B970C" modified="2025-10-08" version="1">MYPKKGVSTLWGSLEIKNARLVKIMMNQHSGVNIENDIENFENHSKEFEKLPLNFLKFFGSTDLVQLIDAIEYATFVYDVRHIVLDNLQFMIGHSNNMNKLEQQDWAISTLRHFATKKNIHITVVIHPRKEDDNKKIGISSIFGSAKATQEADNVLILSNEGGKKLVQLKKNRFTGDIGSVEVNFDKDNKMFFSEETPLNYGRPMGVKDAYKKFIEESRIPIEEDSEKGEVKEDLLFGDESVVQTKRTRKSKSEKKNLDKETDNNENIISRLIIEDQKTEEVEKEEILGNSDEAIKDSGTKKEEKKKRRTAGKGRKKTKEKAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARL9</accession>
    <name>A0ABV2ARL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003816</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002562">
        <property type="protein sequence ID" value="MES1922309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10672" checksum="97543DDB22CFA125" modified="2025-10-08" version="1">MTWSDCGDSNRIWSDDVFCDEDFDFCAERDFCFFAWGNRTICSKEIFFPENGFFFRSQENWSESRLYEDSIGLPMRFLRSILRSFGKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ART8</accession>
    <name>A0ABV2ART8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DnaJ subfamily B member 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DNAJB2</name>
        <name evidence="2" type="ORF">MHBO_003885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002689">
        <property type="protein sequence ID" value="MES1922378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043183">
        <property type="entry name" value="DNJB2/6-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45168:SF3">
        <property type="entry name" value="DNAJ HEAT SHOCK PROTEIN FAMILY (HSP40) MEMBER B2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45168">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY B MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="12"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="193" mass="22166" checksum="17ED55B3AEBCB634" modified="2025-10-08" version="1">MANTEPDFESKDFYKILGVERNATNKEIKKAYRYLALKWHPDKNPKNRRMAELNFRKISEAFQVLGDHKKKRQYDRGGLENINFGNHFHSADDIFRKFFGTDNPFSSMFEDLGFGSGFEMGGFGSEFSSEDDLKSGKSFYSSSTTRKIINGEETVEKTINKNGKLTKEVYVNGQLTRKMIDGVEQNLLEIKGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS29</accession>
    <name>A0ABV2AS29_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">UTP11-like, U3 small nucleolar ribonucleoprotein, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">UTP11L</name>
        <name evidence="6" type="ORF">MHBO_003987</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UTP11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002899">
        <property type="protein sequence ID" value="MES1922470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007144">
        <property type="entry name" value="SSU_processome_Utp11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12838">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12838:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03998">
        <property type="entry name" value="Utp11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015952">
        <property type="entry name" value="U3snoRNP11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="97"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="22517" checksum="DB03A38D277BB9CB" modified="2025-10-08" version="1">MTLKNYLKPAKVHRERAQPKHRRNFGFLEKKKDYKKRAKNHNFKKDHLALLQRKAENRNPDEFYFSMVKSTFSKSGHIRNKKLLEPKEVLAMVEEDIKYLEFHLNIENNKIEKLQNENAVFRFDDSPNNKVDQSENKKSFLQQKMEKRNKIQKLLKKLKLKRCAMLPGRKQKVGDGKRFCFDKIRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS52</accession>
    <name>A0ABV2AS52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003827</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002580">
        <property type="protein sequence ID" value="MES1922319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="123"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="99"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="123"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="142"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="185"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="195"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="308" mass="34913" checksum="1DF1F384A25D9088" modified="2025-10-08" version="1" fragment="single">GSLKLKYEDYSKRQENFRFYKFSLASTFSKRYKNIESHLALKFEYFPKILKRENSKSAKSTGNHQKSHSDKENAPLDKLEEKKSSFLLEKSMSTNHILSKNSSPSHKSVSSAKDFQKNLQTDLLKEQTKKSSGKIDLKPETNDNLSKNGSNKVIVESKRSEETTNTEPEISIENVETAEKTNVVEETEPIPEMDVEQKESEVELKNGKNDSEAVANRATENQNIAQPNVEPINEQTKSDEQKNMVAADLAAKSICQKEAETLPPTKSWSFRRRKQTAKDNLETLIGARLGNEMAFSSAKKMPFKKSPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS87</accession>
    <name>A0ABV2AS87_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003047">
        <property type="protein sequence ID" value="MES1922536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10361" checksum="5C0C9E193E4E7BB3" modified="2025-10-08" version="1" fragment="single">YLTERPSREIVLVEEKPHPKYLTEKPGREIVLVEEKPHPKYLTEKPGREIVLLGEKSHPKYLTERPSREIVQMGGNCVREKLNLDVMQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASA5</accession>
    <name>A0ABV2ASA5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serine-threonine kinase receptor-associated protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">TIF34</name>
        <name evidence="6" type="ORF">MHBO_003964</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the WD repeat STRAP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002847">
        <property type="protein sequence ID" value="MES1922449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004824">
        <property type="term" value="F:lysine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19877">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19877:SF1">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="53"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00040390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="19304" checksum="FCD86BDE073A055A" modified="2025-10-08" version="1">MEFKLLDLKKHSRPITCIKFNREGDLLFSASMDLLENNILLWNPKNGELVGEYKGHLGVVKSIDVNYYSTLLISSGSDKTVRFWKVETGEEILSMAHLSMMTCCRWSNSEKYIACVQESLSDIKSCIFVYRISDELRLDRNPKNRIYNIKNMYFNKNKNLFKNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASB5</accession>
    <name>A0ABV2ASB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004078</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003101">
        <property type="protein sequence ID" value="MES1922564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15495" checksum="FED89436A27E1E96" modified="2025-10-08" version="1">MSRETANIVKTRLFCVKHEKKPRIEAFVLPGPGPQSFCPVFLKLKERNGEYKSEEAPVDLTGAQAQEAFPGVLRVVMMDKASGVEPRFVVNDDFCYEGDSNFYSEDYDLYEDYESEGGGDSECEGDQYESFDYREQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK5</accession>
    <name>A0ABV2ASK5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004167</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003324">
        <property type="protein sequence ID" value="MES1922648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13236" checksum="0804BBD54E95ECB3" modified="2025-10-08" version="1">MSNISEIFANDEISCKRKIAKKLSLKNLFVTSVYFFALLWLFFINAVKTLFDYFPRKRKFFNNKSNYVFEVNLLIRSFSTYLSLGLTIIVGKSKDFVLYLQSPKMKCCCYNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASL2</accession>
    <name>A0ABV2ASL2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003283">
        <property type="protein sequence ID" value="MES1922632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="214" mass="25093" checksum="90F941ED9F3EDD51" modified="2025-10-08" version="1" fragment="single">NIFSTNFYKFNTVFNDIETSICQEEVAKYLVSDQGLPNLLKILQISSVFDNMIFIKKKFGSHVYYQDNKWHYRFHIERKYSQIVYSLDRHLVSGFKERLSSNESPNLLTLISCLLLNLKENFKKLPKSEERLFDSNFRSDFDPISFHCCSTRIACNFVAVLLKNEIMDIETFRKIAETDANWNPLCLFEQNLRLVSAISQIEASMWTLNGVIML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ8</accession>
    <name>A0ABV2ASQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pre-mRNA-splicing factor SYF2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004240</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in pre-mRNA splicing.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">May be part of a spliceosome complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the SYF2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003496">
        <property type="protein sequence ID" value="MES1922715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013260">
        <property type="entry name" value="mRNA_splic_SYF2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13264">
        <property type="entry name" value="GCIP-INTERACTING PROTEIN P29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13264:SF5">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR SYF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08231">
        <property type="entry name" value="SYF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5 7" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0747">Spliceosome</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="38"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU367148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24652" checksum="989806E4443F2C88" modified="2025-10-08" version="1" fragment="single">KRKLETEKPENLVVGPDLSKMSEREKKFYKLKLQFRSSAKKTKREVLYEQNRNKRNSKNISQNTPRKKRIYSLTAADAKNLYDKQDLKARRRKNNGEKDHAFSAYLRKVEVLDDGGLPIQNEKELVNAEDLSIPNKVRNDKTDVDKMVAEIEEARSKRHTFSRRRKYDEEKDIHYINRRNEAFNNKVSRAFDKYTFEIKANLERGTAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR1</accession>
    <name>A0ABV2ASR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003946</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002788">
        <property type="protein sequence ID" value="MES1922433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="18015" checksum="C8F49E92310D17AA" modified="2025-10-08" version="1">MEKKQVERLIKKTLKGIGLYSKEALLLLMGTMAQESAFGRYIRQLNGGPALGVFQCEPGTFNYDLEKLKAKPHLYTKVLKVSGCREMTFEQLETNLALAICFARLHYYFYPKAIPRTLEEQYNYYKVYYNSVQGAATKDQYLTNYKKYIGEFKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASU6</accession>
    <name>A0ABV2ASU6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Interleukin-6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004058</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003063">
        <property type="protein sequence ID" value="MES1922544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="104"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="118"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="128" mass="15184" checksum="1303E465F5DD59A4" modified="2025-10-08" version="1" fragment="single">QTVYQSLKDAVLEKECKENNFIFYMDNFEQTDIHYSDLLETKMDMEHVLQPRGDKSHLYNAYCACVEEEFKHFKKSVESSDLNDTKSFPEIFGCLEKLEEMLNTHNKKPQTNQGGKVKTKDYLRKMER</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX5</accession>
    <name>A0ABV2ASX5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Barbed-end actin filament uncapping</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">carmil2</name>
        <name evidence="4" type="ORF">MHBO_004297</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003658">
        <property type="protein sequence ID" value="MES1922773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027038">
        <property type="entry name" value="RanGap"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24113">
        <property type="entry name" value="RAN GTPASE-ACTIVATING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24113:SF12">
        <property type="entry name" value="RAN GTPASE-ACTIVATING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13516">
        <property type="entry name" value="LRR_6"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00368">
        <property type="entry name" value="LRR_RI"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="238" mass="26735" checksum="2F4D35A5DE6E777E" modified="2025-10-08" version="1" fragment="single">LSIDGENLKVIGETIRNLENSYRKILVENVQISDNAFSDFSYDILCNKNVEKVKMFDCKVNSPNCMNGFYAGFQKYHPNLKSLNISNNNKIGDIGIENLARVIGNCSLESFKFSHCGFTAKGMNILSIALCSKFLLKSIKKLDLSNNNLKKEGSFYLARFIKRTKTLEKLNLSNTEICVGTIVNAIVNRKVSKKSLTDIDLSNCLKMDEADKKALGFYLKNTTTLSRCQMSGIKNNPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT43</accession>
    <name>A0ABV2AT43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004082</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003112">
        <property type="protein sequence ID" value="MES1922568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14507" checksum="159E9AEB1C3F4C95" modified="2025-10-08" version="1" fragment="single">FVKKRKTQILKKNVQQVNVVLRQEHVIQIVTATIVNHADSEYKQTTLVVLVVNKFTNCVLFGGVFVHPFLMPRKGYYRGIFMEDEIDKKSSKDLSEEERLIEEEHQKELAEIAGWYDWINREI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU27</accession>
    <name>A0ABV2AU27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA2/NAM7 helicase-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004073">
        <property type="protein sequence ID" value="MES1922931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045055">
        <property type="entry name" value="DNA2/NAM7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041679">
        <property type="entry name" value="DNA2/NAM7-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887">
        <property type="entry name" value="DNA2/NAM7 HELICASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887:SF495">
        <property type="entry name" value="HELICASE SENATAXIN ISOFORM X1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13087">
        <property type="entry name" value="AAA_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA2/NAM7 helicase-like C-terminal" evidence="1">
        <location>
            <begin position="20"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14476" checksum="C2269B058D502A21" modified="2025-10-08" version="1" fragment="single">DHQQLPPTVFLTGESSARIEKSMFERFQIAGFHSKQLLNVQYRMHPEIAKFPSEQFYENKLLNGANVMKTDYKKSFHSNPNFGPYLFYDLKSVETRLGFSLFNIDEANFVVSLLEDLCREFGPSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUL4</accession>
    <name>A0ABV2AUL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004926</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005820">
        <property type="protein sequence ID" value="MES1923361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6605" checksum="17FD23946425D425" modified="2025-10-08" version="1">MNEVMEVAMSQDFVSYLVAHQLRNETQKVVFNHYELDFSGDSVVHLWMYTTADKLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP2</accession>
    <name>A0ABV2AUP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004932</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005843">
        <property type="protein sequence ID" value="MES1923367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="33"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9204" checksum="E7F8DE546ABF0D8F" modified="2025-10-08" version="1">MGGTSDLSSDIITKIRKMHDDFAILLRVTKERVEAETSKLKSKENLCKNYAKEIKNALEKMKKMLIESATMQKSKDDFCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV32</accession>
    <name>A0ABV2AV32_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005108</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006645">
        <property type="protein sequence ID" value="MES1923524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17418" checksum="6A5C2DED3227545F" modified="2025-10-08" version="1" fragment="single">KDEPKKKAAPELPASFKELKELEPEIATAVEELLAQRLSDAQSLIDSKVNTYIAPVQEQVAQMHQTTHMSRITAAHPDANSIAGSDEFTAWIDKLPAWEKRSADSVIKGGTSDEVIELLDYYKEANDLRSKVSTNKTKNVKKKVDEELVKKVRDAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV38</accession>
    <name>A0ABV2AV38_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005568">
        <property type="protein sequence ID" value="MES1923306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="172"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="65"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="103"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="197" mass="19557" checksum="C94CD8BEFC706F7B" modified="2025-10-08" version="1" fragment="single">MADSVDLMDFVMGGGRLLASQKSKIDLSSWLDDQDDVNSLLDQLSASTPAVTVSDSEGAGGSSSNGGSPDVDVGGPECNEAMVPETPEGSESASDSDSDSDGDSSSSESDSCASDASSVLTDTSMDYSCDEVFWPNPDKSVKGSDGAAGPSAAAVAAAAAATCEVGDPAIYSDISDAEDEDRTSGAGSARKSPVSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV62</accession>
    <name>A0ABV2AV62_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Metallothionein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005136</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006816">
        <property type="protein sequence ID" value="MES1923547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="80" mass="8420" checksum="D2E2FEF4AF0DB9F2" modified="2025-10-08" version="1">MLSCNCTKKSDKAACATKTEQAADCTGDCANCDSKAACDTKGEDCCKDACKDADKKCDKSAQKECKKACEKESKGCCGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF8</accession>
    <name>A0ABV2AVF8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phage protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005277</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007502">
        <property type="protein sequence ID" value="MES1923659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="60" mass="6787" checksum="7DE943DA7718935C" modified="2025-10-08" version="1">MEGRIKIKPAFRITIRCIDEGDYKDTTFERKMELGVVAENCKEAIQKAADIIALEDGVNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG7</accession>
    <name>A0ABV2AVG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004942</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005910">
        <property type="protein sequence ID" value="MES1923378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6241" checksum="FA1E526B3802084F" modified="2025-10-08" version="1" fragment="single">MRLVVKLDCVSENLGTMKGDPVKITPSDDVEPYCVTTPRSIPFLLLPKVRNGLDRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVL9</accession>
    <name>A0ABV2AVL9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004974</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006047">
        <property type="protein sequence ID" value="MES1923408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05450">
        <property type="entry name" value="Nicastrin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16515" checksum="EC15C4FC5738FC17" modified="2025-10-08" version="1" fragment="single">GFIDLQQLANVKEESVYTENLSIYGTNLLNNKLGKIFFDNLETYAEQTSLTFTKHTQTSQKNVMPPGSNWPFISQNRFDNLGFVAVTDHDGRFINPFYQSRYDEEINKSALIEITTTVLKSILKTLFPKDEDVKNIKVTLRTVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW31</accession>
    <name>A0ABV2AW31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tyrosine--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Tyrosyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005095</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>tRNA(Tyr) + L-tyrosine + ATP = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10220"/>
            <dbReference type="Rhea" id="RHEA-COMP:9706"/>
            <dbReference type="Rhea" id="RHEA-COMP:9707"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78536"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010006585">
        <property type="protein sequence ID" value="MES1923513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050489">
        <property type="entry name" value="Tyr-tRNA_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46264:SF4">
        <property type="entry name" value="TYROSINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46264">
        <property type="entry name" value="TYROSINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00033323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00048248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="10368" checksum="389E93ADCE1E3069" modified="2025-10-08" version="1" fragment="single">ENDENQKRKDSKNRFEFIIERDDKNGGLAKFYKFEEVETAFKSEKLHPSDLKKATAREINILLEPVRKHFSTGKAKELLKQIRSFRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW41</accession>
    <name>A0ABV2AW41_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Endonuclease III</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005213</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007177">
        <property type="protein sequence ID" value="MES1923609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="81" mass="8978" checksum="A7351AA2692D06ED" modified="2025-10-08" version="1" fragment="single">SGKDIDVATTPTPLWKPHDHEKEMVEELSIDGLVRAVCGKHDHQCNDCPIGSKRNGGGMDCEGFRKTYPATAIEIMRKELI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWP8</accession>
    <name>A0ABV2AWP8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Chromatin-remodeling ATPase INO80</fullName>
            <ecNumber evidence="5">3.6.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">INO80_3</name>
        <name evidence="7" type="ORF">MHBO_005246</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Component of the INO80 chromatin-remodeling complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">The DBINO region is involved in binding to DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the SNF2/RAD54 helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010007314">
        <property type="protein sequence ID" value="MES1923633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050520">
        <property type="entry name" value="INO80/SWR1_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685:SF2">
        <property type="entry name" value="CHROMATIN-REMODELING ATPASE INO80"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685">
        <property type="entry name" value="HELICASE SRCAP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0347">Helicase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SNF2 N-terminal" evidence="6">
        <location>
            <begin position="2"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU368001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7965" checksum="997876F20AD9DE98" modified="2025-10-08" version="1" fragment="single">MAELWSLLHYIMPSIFQKHHDFKEWFSRNIEDHAEGKSQKLNSAQLKRLHMILKPFMLRRVFNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ADY3</accession>
    <name>A0ABV2ADY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000006</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="29219" checksum="F530D8459FD03B03" modified="2025-10-08" version="1">MDDINAEIEQHLKSKEDTGKIVVQQPLHPLELAILYSNRSKNKQTKTTLFETYNNNISQFGYEEKMSKKVKTDENPNFDKRDEKFRACTRIHFEGIFKEGQENEHCWLALLGADSLRTKENLLWKCKWCDAFIGYAKTKSKNTETEFPETSAQKTTKKNGFKRRLAEANELQGYVFKTCSNENTYYSASIEKEQEGQKSFCASKLEDLTEKDKKNFLRKFFPSVALEIKETEGEIDLVRAVQNAHNSVNNNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE48</accession>
    <name>A0ABV2AE48_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Haloacid dehalogenase-like hydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000031</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000150">
        <property type="entry name" value="Cof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00099">
        <property type="entry name" value="Cof-subfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10000:SF8">
        <property type="entry name" value="HAD SUPERFAMILY HYDROLASE-LIKE, TYPE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10000">
        <property type="entry name" value="PHOSPHOSERINE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08282">
        <property type="entry name" value="Hydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01229">
        <property type="entry name" value="COF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="260" mass="29334" checksum="C6D03EDF221E4617" modified="2025-10-08" version="1">MSTRSIHSIAIDLDGTLLKSPINGETEKKISEDSKQILRKLDKMGVEIIICTGRMPSCVFPIIEKIGVNCSLVTFNGALAYSKLDKERERTIIYKQFLEGEMTNKIFNFAEKLGYSVNFYTDSVVYSICKDNKQKELIVKYIKLCSANYQYIENYNEFKCKKAPKLAIMVPTNKVDSIYEKAKNTFGTEVHIILGNFFIEFLCANTNKATGLCSLLKHLKIDVDKTVGIGDGNNDAEFLNFVGYGICMKNGSEKTKKLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEL8</accession>
    <name>A0ABV2AEL8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000148</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Rho GDI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000019">
        <property type="protein sequence ID" value="MES1918132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.50.30">
        <property type="entry name" value="Coagulation Factor XIII, subunit A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000406">
        <property type="entry name" value="Rho_GDI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024792">
        <property type="entry name" value="RhoGDI_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10980:SF3">
        <property type="entry name" value="LD16419P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10980">
        <property type="entry name" value="RHO GDP-DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02115">
        <property type="entry name" value="Rho_GDI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="14023" checksum="1B042E74338DAA35" modified="2025-10-08" version="1" fragment="single">SNPSNFMTDESFQRYKERLIKNENLIIDEKNPDSFILKKITIIVEDEEKFNFEPSQKIHFILKEKSVYRIKIHYNVQRQIIDALCMETKIYRKGIKVLTNEDMIGSYAPSEKTYVVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEY9</accession>
    <name>A0ABV2AEY9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000009">
        <property type="protein sequence ID" value="MES1918044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="173"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="457" mass="54062" checksum="8AC1A08D294149C7" modified="2025-10-08" version="1" fragment="single">MLKVLKNCGKRRTVVKKKQFSTSVAMKKINSISQNLFKGSSNSNRSIRISNIKDEKARLLFEKYENDLTTFKKDQYFDTFSCLLVFKNDKAISNFFENDAPNLENANIKFCSKQPKTAILKQEELPREYLDYQLKSTENTIKINKKDFLEKYNSKINKESTEKIKIDLESLQIDKKDSALRQIGQELEEMNEKTMSEKDEKNLQREKYDIEYLQNSFDAVDSDVNLTSRKNYDKILSQKSVKYFNKNPNLVTEIGENVATKNQTIDWHSKFVDFENKWHYPELAKLKVKSQLENLKQMITAETDWVEISGIKKMVVNEMGKNNFGYSGLFGIEHDYMGGKEDNENKRKNRVSENNEELEMVDLTLKERLLYAQMVRYIEEKNDVKSSETTNEYKKWDKEWPRYILPDGTEYSEMDNEKAIEKWKERKMDFENSKKFEKRKNEILTKQLLGKTEELSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEZ6</accession>
    <name>A0ABV2AEZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protein phosphatase 2c, variant 2</fullName>
            <ecNumber evidence="7">3.1.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PP2C</name>
        <name evidence="7" type="ORF">MHBO_000247</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PP2C family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000032">
        <property type="protein sequence ID" value="MES1918250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000222">
        <property type="entry name" value="PP2C_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832:SF827">
        <property type="entry name" value="PROTEIN PHOSPHATASE 1L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01032">
        <property type="entry name" value="PPM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="6">
        <location>
            <begin position="22"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="21224" checksum="4BD163A62540505D" modified="2025-10-08" version="1">MGTLNSCLKSKSLYRDGNENFSVGTATMQGFRLNQEDAHKYTFSLKNHPSYALFGVFDGHGGEKASHFLEANILDTLNNLEKLDDENIQNALMLLDKKFVSEENSNIREQGSTCVFCLVKKSKNKLNKTIYDLTCFNTGDSRCLLLKQTGGYQPLSNDHKPTDKTELKRIKEAGGTVSSNRVVNSFSILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF70</accession>
    <name>A0ABV2AF70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000312</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000044">
        <property type="protein sequence ID" value="MES1918333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046947147" evidence="1">
        <location>
            <begin position="21"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="15313" checksum="9BBCEDE1F95D74BD" modified="2025-10-08" version="1">MKIWIVCAVLAFLRCFSANAVVSVKSVTVIHFRDNGIETFVEENNMDSKMQYKKIENNGVVQKIKLLEDVHGNKNLTLLESSPSLTQSKDFFIEQSQLKFYIKLLGTLFKSLLKIRLLSSISKNILIRMEIWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG0</accession>
    <name>A0ABV2AFG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">ABC transporter B member 11, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ABCB11</name>
        <name evidence="11" type="ORF">MHBO_000130</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000016">
        <property type="protein sequence ID" value="MES1918113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18577">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18578">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03249">
        <property type="entry name" value="ABC_MTABC3_MDL1_MDL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394">
        <property type="entry name" value="ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394:SF27">
        <property type="entry name" value="ATP-DEPENDENT TRANSLOCASE ABCB1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="24"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="68"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="170"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="255"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="652"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="695"/>
            <end position="721"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="770"/>
            <end position="794"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="800"/>
            <end position="820"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="878"/>
            <end position="901"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="913"/>
            <end position="934"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="29"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="354"/>
            <end position="590"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="656"/>
            <end position="942"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="978"/>
            <end position="1218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1221" mass="136297" checksum="099FD93E942677A3" modified="2025-10-08" version="1">MREKAEKSQINYFKLYRFCTKFDIFLLSIGFLLAIASGATTSVFAIILGRFVDILTNQQTNAIQFERLSLFFVYLGIVSFALYSGGFWTFLYVSGKQEIKCRKAYFRSAIRQEVEWFDEKTPVSISARLSRDMRKYKISVGEKVPILARDISSFISSIAIGYYYGWQYALLMTSCIPLIALSVTALSYISQKYEKREKQAYLNARIISTETIKGIKTVSSFCNQKYQEERYYRELEKTKNVAVLKNIFTGVSSGGMMATIFFVYGIALWFGGWLIQNNVVTPFTGKVYTGGDIITIFIVNINGATALGQVTPLIRAMAEGTVAGAAIFAVIDRKSKQDYYSDHGIKPKDITGKITFSNINFSYSSRKEMLVLEKLSFGVSPGQKIALGGPSGSGKSTVASLLERFYSPTEGNIYLDSFDLEDLNLKWWRESVSIVNQEPVLFNGTIRENILFGRLNATEKEVIEAAKMANAHKFIVKLQDGYETNTGDGGTFLSGGQKQRIAIARAIIKDPKLLILDEATSALDTRAEKTVQAALEKVMKGRTTLIIAHRLSTIKNSDLIFVMKNGKIVEKGNHKELIQKRGEYSSLVKFQTNMKLTETSAEKQQYGKISVASQNSKKESFKIGHNVSKQKKGKIPKVSLWRLIKMSEHEKYYIMAGMLTATLSGMTFPMLAIFVTNILETYSKIDKSSIEKDSLVYLGAFFALGIINFLSDLGSGYFYGYSGETLTKKLREMSFHSVVSKKMEWFDQEVNDQSKLSDLLETETTKVNDVTVGILPSIVSAISTLVTGIIISLISSYKLGLAVLASTPLLIIAGALSMLASSSIEKSSEKAIKNSNKLSKEVFDNIRTVAAFAAENSFVERYEKCYEEHSSRFFKKSVIAALPFGLVELIYYFINALAFYYGSKLIQSGQISFTQMLSSAFGAILGVSGFRYAIEFSPDIKEARIAKDKIFHVIDDDNDEIKGGYEVEDILKDGKFDIEFKEVDFFYPARQKEKVLDNFSFKLKQNTSISVVGSSGSGKSTIVSLMLGFYKPNKGELYLNDVPYKDINIHSLRESIGLVLQEPTLFNGSIKENIRFGKLDASDEEIIEAAKKANIHNDILSFPNQYETNCGIGGTKLSGGQKQRVAIARALIKKPRVLLFDEATSALDTESEKIVQDAINSLIEEKNAQRSTLSISHRLSAVKFSNFILVLSKGTKDEFGTYSDLIEKKGSFYKLLRAGNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFQ9</accession>
    <name>A0ABV2AFQ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">MIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000489</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000077">
        <property type="protein sequence ID" value="MES1918529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.80.10.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036300">
        <property type="entry name" value="MIR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016093">
        <property type="entry name" value="MIR_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46809:SF2">
        <property type="entry name" value="GH21273P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46809">
        <property type="entry name" value="STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00472">
        <property type="entry name" value="MIR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82109">
        <property type="entry name" value="MIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50919">
        <property type="entry name" value="MIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045099718" description="MIR domain-containing protein" evidence="3">
        <location>
            <begin position="22"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="MIR" evidence="4">
        <location>
            <begin position="23"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="24571" checksum="780A3282FDA1D21F" modified="2025-10-08" version="1">MLFRTAMIINFLVFSLTVALADKLPVTYGSVIKLQHQKSNYLLSANEAHWGSGSNQQIVTAMAGDERTTWQVFSSRKDSKKQGEPIRCNSNINFVHTKFKCYLHSHPIESLLSNGLQVSCHKPHDYNDDFFVFCKGKYWTTETPVKIKHEKTGRYLSTDQKYVFGSNNCGQNCPILRELEVFGKTKGDYEWIANQGLFFNEQKSEEINNVKKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW1</accession>
    <name>A0ABV2AFW1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CBS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000507</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000083">
        <property type="protein sequence ID" value="MES1918552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050511">
        <property type="entry name" value="AMPK_gamma/SDS23_families"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13780">
        <property type="entry name" value="AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0129">CBS domain</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="40"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="193"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="274"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="338" mass="38580" checksum="A11D465B5C7F1500" modified="2025-10-08" version="1">MTSRTIRRLSTAKSVSAKFFLDTCTLADVVKSKEKDNRIRKLVSVEGSTSVFAAMQIMLQKEVNTIVLYRTKGDSKKKIYFGMVNTVDLVYWFAWKQLKTDSEQIPISELAGVTEETKNFWTYPVAQHLDSVVQPFMQGIHAIIARRLHSKIRTIFVSQWDVVKFIHSTITIVTRQNDFFETTLKNSGILGRTQKPMSIESSSPVTKGFEMMSKMSFTGIAVVDEDGKLVSSLKSSHARQLFNKDLEKKFAEESVAAFLKRIGEPFGEKTLQNVVDENFTIEEMFKLVVDQHEHRVWILDESSRPRHIITLSDMIKETALRDFYKDFDDSSSGTSESS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG52</accession>
    <name>A0ABV2AG52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000412</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CLPTM1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000063">
        <property type="protein sequence ID" value="MES1918444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008429">
        <property type="entry name" value="CLPTM1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21347">
        <property type="entry name" value="CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21347:SF0">
        <property type="entry name" value="LIPID SCRAMBLASE CLPTM1L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05602">
        <property type="entry name" value="CLPTM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14937" checksum="DF11D8640839F00D" modified="2025-10-08" version="1">MKNSLNPIKKQNNELAITLETVPNYKFLLKTNFERSFEMQKSTFGEMEKEMEGIKRALRDTNPLFLALTFSVSLLHMVFEFLAFKNEIAFWKNKNDLHGLSVRTMFIELFSSVFCLILKICFSFCCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG92</accession>
    <name>A0ABV2AG92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000453</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000070">
        <property type="protein sequence ID" value="MES1918489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="188"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="205"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="226"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="239" mass="27150" checksum="57545F19A01396FD" modified="2025-10-08" version="1">MNKLDELINNKNEKSEKLGNHIVDLQNNSTRITEFVSILLAKGEFLLAENKALKIEKICAELKSMNLEIKLKSVEFEMRKIKEKLSRSDEILKRKKSTKRISANEKRISRKKSVTVLDNKESPKNVEMEKLKDEWIENKLKVLIAISPKSTDEQINEFKKNLNATWWSLTDEQRKEEAETVKISLGTLTEDSSSVSDDSIELSDYESSTLSSSTLSEKSAKDSDSVSDTSSFGSYSDSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG99</accession>
    <name>A0ABV2AG99_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000613</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000106">
        <property type="protein sequence ID" value="MES1918685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="297"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="327"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="377" mass="43744" checksum="D7D15D93AA04F2D0" modified="2025-10-08" version="1">MCKKDSLYLIHSEEETFRKFLHTATNDSEKEFFPLLKDFVFGSIDSNQSIFIKGKLLQMANNPFLLLSNLVDIKNKWHMTNVLKEKDEIFKQANYFVAKQIVENTSFKQSSFDLWSKLNEILKMNAYRKLISALSEVSEVYDKYKNRHYEITLTTQKVVTLGIDVVCFIDKMAETHLSKLEKSDPLEKDPRYLLDIILDGYRRCNGNLKAFDFNEAKQIEREFSLAKRCGSRCSLNDDKINEGLFSLIGLLKTIYKDTLHKNSNNTYFQLPSSECARRKHTFVNLIKDKFIAFTGEYFWLSFYTVSFLLFLSIGLKNSYSRNAELSMIMLLGLIFGLSIGSEVAMRINLIVRVAKHVGKCLGFTRKGKTKNDQEAYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGA1</accession>
    <name>A0ABV2AGA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000444</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="50" mass="5869" checksum="8FFF43AD63B203C3" modified="2025-10-08" version="1">MRQSEISRTKLVVFEMSILQKFRKSCSPFSRLQASSILPQSKSFLKNEYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGB0</accession>
    <name>A0ABV2AGB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Endoplasmic reticulum chaperone BiP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">HSPA5</name>
        <name evidence="4" type="ORF">MHBO_000628</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000110">
        <property type="protein sequence ID" value="MES1918706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="entry name" value="Substrate Binding Domain Of DNAk, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), peptide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="12"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="8110" checksum="33DCFEFCD6487C75" modified="2025-10-08" version="1">MTVSAEDKDSSNRAQITVTNDDSNRLSDKDIENFMEQHEKNKEEDEKMYQKVMAKNNLEQQAYRFSSAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGK6</accession>
    <name>A0ABV2AGK6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000697</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000126">
        <property type="protein sequence ID" value="MES1918793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="276" mass="32126" checksum="DF12D8195A9BC928" modified="2025-10-08" version="1">MGENKTSEQYFTFTVTNDTDRKMSFFDKSKSNFADYQYQDISPGETIEGYTKSPANLWAVDALTGERQQEFEVFSDGEHLSIIPQPKIVARQKLLSNYSNYFRQKYFEENGIEWKGDVLRAPVKSFMWNANYKNFEQIAKSSARKFSLDCNNDNNGIENFSDNENGYQIFSYNSNGKNVEENDDDYKKIDNENKKNNDKNVNDVTKDSDNGDLKYKLLTERTFPKVFSINGFLSKDESKFIASQYSHLLQEFDVFKDKGFCNNLKFLLFVAVPIFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGN9</accession>
    <name>A0ABV2AGN9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S17, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000579</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000098">
        <property type="protein sequence ID" value="MES1918639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00364">
        <property type="entry name" value="Ribosomal_uS17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000266">
        <property type="entry name" value="Ribosomal_uS17"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00366">
        <property type="entry name" value="Ribosomal_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="181" mass="21143" checksum="5BE29CA01C3B5201" modified="2025-10-08" version="1">MSSFKKLVLSSVGAKNGIKYNIYVNRVKGKNHIRVQKEKQFDLDRLKELKNKYIQVSSNHWMGLVLNNTRPKTIAVLVNHYVKQKFTKMPIKKRRKYHVHDEKNECVPGDVVLFKLGKKRSKSKAFDLVTVVKPAGRMENFLPMTEDDKKVHEKNGEVIQGENTYIRKEDYHDIVMGKDNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGV1</accession>
    <name>A0ABV2AGV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000150">
        <property type="protein sequence ID" value="MES1918895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="20319" checksum="39A00DE38DF7CC2D" modified="2025-10-08" version="1">MNRVIFLNSLHFDRNKQKYRDKPFNGKYRDIFDDTMTEITNFVQSELVSKKKKALRKRLLEERHDLYTARLQKSYDKRAKTDIEKKLLLQRITELEQRLLLMEGTASERLALLEKDELIKRLKSNIEQRSLVSGIDEEQKKLIGKEFRIALLRLELKKPFEEDRFGLVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX5</accession>
    <name>A0ABV2AGX5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">FYVE-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000823</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000159">
        <property type="protein sequence ID" value="MES1918936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000306">
        <property type="entry name" value="Znf_FYVE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017455">
        <property type="entry name" value="Znf_FYVE-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF388">
        <property type="entry name" value="CLARET, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01363">
        <property type="entry name" value="FYVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00415">
        <property type="entry name" value="RCC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00064">
        <property type="entry name" value="FYVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50178">
        <property type="entry name" value="ZF_FYVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="21"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="FYVE-type" evidence="7">
        <location>
            <begin position="193"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="27350" checksum="6A673E5252B34978" modified="2025-10-08" version="1">MVSCGSSHTAIIFESISPKECCLYAWGSNKSGQLGIPITNETSFLKLPTSVKLSGSPEFVECGSNHTFLKFSDNAIFSTGNNLRNQTGIVSKAAYENYKNEKKLGQKNINSKENSRSRRTFLKHKKIPIQSKIDSEIEAPIFYNEKFEKVLLLEKKSVSRIVCGGDCTLILTIKEWIEDAETSECMGKYAPNCKEKFSFVVRKHHCRYCGGIFCYVCANRFVYTNSKNSVRYCDRCYEQIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX7</accession>
    <name>A0ABV2AGX7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000763</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000144">
        <property type="protein sequence ID" value="MES1918867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="243" mass="29025" checksum="94C028CAE97D160D" modified="2025-10-08" version="1">MRNLTEQEKSKFMQKTLDQRRKKAQRAKESRLKKKKYIESLERKRDQLKLKLSMLETDVNNNAMVNKSHCDKQSKVKKMMFEQLEKKLDVDEALEDYIKIFKRNSRSRQHLSQYFLSKVGDSLVPDVETKFILWGLGMQKSKFYTNKNGVFHRVMVEKLKLSNKQYEKLLSYRGTAKSLCALLRQCLKELSLYEKELIAMLKAQHDHIDEVSANFSPREIANFCRWVDQNQNMMFMLNAFWDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX8</accession>
    <name>A0ABV2AGX8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Collagen triple helix repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000113">
        <property type="protein sequence ID" value="MES1918719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637">
        <property type="entry name" value="COLLAGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24637:SF421">
        <property type="entry name" value="CUTICLE COLLAGEN DPY-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="138" mass="14277" checksum="E23C0A17BFDF364E" modified="2025-10-08" version="1">MNKYRHYNYNETFDNKRHFCDEEHYLIRIPRPKPGPPGPPGCPGTPGKSVIGPRGFPGVPGKDGCPGPRGRMGPIGPPGIPGAKGERGCPGAPGCAGAPGAPGNTGPHGLKGFKGPVGPPGPPCFDYEEVFLSPKTTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH18</accession>
    <name>A0ABV2AH18_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DIS3-like exonuclease 1</fullName>
            <ecNumber evidence="5">3.1.13.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">DIS3L</name>
        <name evidence="16" type="ORF">MHBO_000695</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates.</text>
            <dbReference type="EC" id="3.1.13.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 14">Belongs to the RNR ribonuclease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.13.1" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000126">
        <property type="protein sequence ID" value="MES1918789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.690">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.700">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041505">
        <property type="entry name" value="Dis3_CSD2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001900">
        <property type="entry name" value="RNase_II/R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022966">
        <property type="entry name" value="RNase_II/R_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050180">
        <property type="entry name" value="RNR_Ribonuclease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033771">
        <property type="entry name" value="Rrp44_CSD1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23355:SF30">
        <property type="entry name" value="DIS3-LIKE EXONUCLEASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23355">
        <property type="entry name" value="RIBONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17849">
        <property type="entry name" value="OB_Dis3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00773">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17216">
        <property type="entry name" value="Rrp44_CSD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00955">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01175">
        <property type="entry name" value="RIBONUCLEASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="10" id="KW-0271">Exosome</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0540">Nuclease</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RNB" evidence="15">
        <location>
            <begin position="273"/>
            <end position="648"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00016366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1918789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="840" mass="97608" checksum="8BAAF335B5CE44F3" modified="2025-10-08" version="1">MQILDCYQSIQDYLCNKDINSNIEKFDEFLTQEELNFGLRNGEIVRGKIHFDYNWQEAFIYFDKFSQNEENSEKSKILILGKNNINRVINGDEVYVKILPRNLWRRSASESIVNEEGENIDEEIDYVSNVKDDISNSEKDDFAPNGKVVGVFKRNWRTYVATFQIEEETDKFRESNEILLCVPFDPKIPKIRVRTRNGNKYKNSRLKVVIDNWDVDSFYPNGHLLGELGKIGDLETETKVVLLENGLEIGDFGKMENCLPNDWTIPNEEIEKREDLRKSRTVLSIDPIGCEDIDDALSVHQISENVYEIGVHIADVTYFVPKNSPIDNEARYRGTSVYLKDRRIDMIPKRLSANECSLHKNKDRLVVSVFWKIDLKKKTKILEKWFRRSIVRSSAALSYVEANLMLLHPNKHDFDVMVSKQNEKQKEILEKTKSFDETKYKKLRKAILTLSEFAIFLRMERENNGAVNFNKNWELNSEDFFLDNVKDKEINELVKNMKIDKSEKLMNAHNVIEELMVLANHSVAVQILQSSPKEALLRRHGSPEKKSSKEMNEKLAKIGVEKLNFRTNKSLAHSVVQVTALKPKLDGIIKLFLRVAMSEAEYFCAGDEKCSEISHFGLAIDCYTHFTSPIRRYSDIVVHRNLIESAGFDINSSFRESPSKKIKPNQNSIEEIGTKIEQIKEMAFHLNTKNRSARNAQRMSIEFSRILELKNHFYYTFAVIIGIKENGFKVFVPNFQIEIDENSEDDQDSSSFQGAVVLKNKEGKFNEPFPIKQSRKTVENQNDCYIEKIDDTQILLKVPSLKIERRFELMEKICVQIGIDPNSKNIYRFPSIKLRFAFDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH50</accession>
    <name>A0ABV2AH50_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glycosyl transferase family 25 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000881</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000176">
        <property type="protein sequence ID" value="MES1919001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002654">
        <property type="entry name" value="Glyco_trans_25"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01755">
        <property type="entry name" value="Glyco_transf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycosyl transferase family 25" evidence="1">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23299" checksum="D55A284639EB4AAE" modified="2025-10-08" version="1">MKNVMSKLKIDPIFIDSVLAKDLESTPKEEFVKRGIITSDAKIKMSELACALSHIKTLMHFVDENTKNCLILEDDIDSNFNLETLKNKLSDIFEHLKGSYQFLNFGRCFGNCCFDRKISDNLAECIKPFCLHAYSVSSEYAKLILKEIFPLSKPLDYEILNLKKRYRTRFYCSTPWLFVQKREEVPSTLRDGQTDLPECIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH70</accession>
    <name>A0ABV2AH70_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000904</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000182">
        <property type="protein sequence ID" value="MES1919026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001660">
        <property type="entry name" value="SAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07647">
        <property type="entry name" value="SAM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00454">
        <property type="entry name" value="SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47769">
        <property type="entry name" value="SAM/Pointed domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50105">
        <property type="entry name" value="SAM_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAM" evidence="1">
        <location>
            <begin position="26"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="108" mass="12178" checksum="D931A4CF40D6C348" modified="2025-10-08" version="1">MSGTEKAGLKAINATENSLASDWKNWDNCKVAAWISSLKLQNDYSQTIKNFHLTGGSLINLCPEYLDFLHINNLEDKLKILNSLSDLIVLKIDLLYKKVIVEIQEKGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHA1</accession>
    <name>A0ABV2AHA1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Replication termination factor 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000928</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the rtf2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000187">
        <property type="protein sequence ID" value="MES1919054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16653">
        <property type="entry name" value="RING-like_Rtf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006735">
        <property type="entry name" value="Rtf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027799">
        <property type="entry name" value="Rtf2_RING-finger"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12775">
        <property type="entry name" value="PROTEIN C20ORF43 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12775:SF0">
        <property type="entry name" value="REPLICATION TERMINATION FACTOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04641">
        <property type="entry name" value="Rtf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="144" mass="16295" checksum="AD8BCA6FACB1E3F3" modified="2025-10-08" version="1">MGNDGGTIVGRMCVKIKKPKKSPKNVSFGETELDKWRHCSLSQEPLKNPIVIDRLGFLINKEALIKHLLQKSLHEKFSHIRSLKDVYPAKITFSKKSISSGSEIKAFYCPISDIMANGKQNFIVVKPCAHVFSEKALKEVKWQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD0</accession>
    <name>A0ABV2AHD0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000952</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000194">
        <property type="protein sequence ID" value="MES1919084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="312" mass="35511" checksum="CA69646AEF72170A" modified="2025-10-08" version="1">MPPEELCSDEWNKETINAVVSQNTGWAKKTRDFLKRLDCSLLVACVHRRQNSPIGEIKFHNLFALAVFLIRAAVAAQPRNVGRITRAIAALGMGRSLAAASEDEDLNYLVEYLRFTFTRLSQLLGNKREKRKFLAKLKADLHEFVCVLRRKEACKSNIDLRSFLLSRMKEQLWFSPNIWQKMHYFEAFAEKFVGYNKLTYALIEHTKLHIALSLDGIGYSKCAAEGDGWNVIVVLERQFGISAKEAGKVLSEMLADTKQRIEEEMKSLTESAAPGLSRYKNTAIRKLFEYCLDSISAPVVWGAKSDYFRVDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHE5</accession>
    <name>A0ABV2AHE5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LAGLIDADG homing endonuclease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000967</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000199">
        <property type="protein sequence ID" value="MES1919101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="97" mass="11037" checksum="55CD509EFC2521AA" modified="2025-10-08" version="1">MSGKDLSHRTIGESTLLALAESLLVPTKSLSAKTECSPSRGKFSFYRLYSKIVKPCHRFNRAQFWAVLRKSPNFPHVVNKIKSDSQNDKIVRLEICK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG5</accession>
    <name>A0ABV2AHG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Telomerase reverse transcriptase, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">EST2</name>
        <name evidence="1" type="ORF">MHBO_000973</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000201">
        <property type="protein sequence ID" value="MES1919108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003964">
        <property type="term" value="F:RNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.70">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0695">RNA-directed DNA polymerase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8864" checksum="F358261C7D05202A" modified="2025-10-08" version="1">MYFKTRFEEKSKKINYGKIAKQMLNFNKNQSTELKISHKFVIRLIYRIIKQNFPKNFLGSKKNFRQLTKSMAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP4</accession>
    <name>A0ABV2AHP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000843</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GET4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000166">
        <property type="protein sequence ID" value="MES1918959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007317">
        <property type="entry name" value="GET4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12875">
        <property type="entry name" value="GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12875:SF0">
        <property type="entry name" value="GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04190">
        <property type="entry name" value="GET4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="31663" checksum="B1F8E317FF526C07" modified="2025-10-08" version="1">MSKITNKRFVKKLKLARQYLADEKYYETATLLKSLKISFSKISNLAELLNFMNNFVSILFNSNHPNLADEIALLYIEAYSKSEQNETSKILDDFDILCKIAALYSDFLQPFQKAFYLEKALKLMEQKRFPLTLITKMHSTIAKFYCFQVRDYNNAHRHFLESGDISEHAKMVVMWSLCSVDEVDVLVTKIVLDYLAKNKINESSKFLIKMLISLNKLVDNPLINFCFLAIKSFEEQNFELFEELTILYKPEISDFHLDVEVVLEIAKRNVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP8</accession>
    <name>A0ABV2AHP8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001046</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000220">
        <property type="protein sequence ID" value="MES1919183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="188" mass="22482" checksum="230749A0667CB250" modified="2025-10-08" version="1">MSEPDYRKPKTVINTKGEKTVYSAYTNRPIKTYPGETDETRNKRLQRNFIAARNKRVSEKNLIRSLKEDLREIEDYNQRLREGCKILRKYINARKCIYGSNMSYLNNRVDYNSNKLDCVFKPDLSNWSKADEEKFKREEAFYKEEREVNRVKLLNNDITEYNFGANEDPCLLTDDSEDYLDKQLKELF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT7</accession>
    <name>A0ABV2AHT7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Solute carrier family 35 member F1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001100</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC35F solute transporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000237">
        <property type="protein sequence ID" value="MES1919241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037185">
        <property type="entry name" value="EmrE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009262">
        <property type="entry name" value="SLC35_F1/F2/F6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052221">
        <property type="entry name" value="SLC35F_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14233">
        <property type="entry name" value="DUF914-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14233:SF4">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35 MEMBER F2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06027">
        <property type="entry name" value="SLC35F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103481">
        <property type="entry name" value="Multidrug resistance efflux transporter EmrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="132"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="200"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="223" mass="25457" checksum="A7B4A6B7C6B2AC66" modified="2025-10-08" version="1" fragment="single">MGSAKPDSIKFGKAFKIISGWQFVTFLLAGTLVFTDLLKKNHTSLPSLQSTFAYLLVTIIFLPAFFVKEGFRLPKEPLWKFMLIGLLDVEGNFMIILAFRYTSITSVSLLNVSTTIFVAIFSWQFLKFKFRIYHLVFIVITVIGMTLLILTDVIFSEKSFTEGKPWQQILLGDGLVVLGCFFYSIENVTQEDIVKKEIQFYEYLAFFGLCGFVICTVQGFFVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU4</accession>
    <name>A0ABV2AHU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MYG1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000238">
        <property type="protein sequence ID" value="MES1919246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003226">
        <property type="entry name" value="MYG1_exonuclease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11215">
        <property type="entry name" value="METAL DEPENDENT HYDROLASE - RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11215:SF1">
        <property type="entry name" value="MYG1 EXONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03690">
        <property type="entry name" value="MYG1_exonuc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14803" checksum="D19DF2EAC8E501E9" modified="2025-10-08" version="1" fragment="single">KESIKFLKDSWLPARRIVLKAISERFEFDKSGKIIVLDKFCPWRGIVDEENKDILYVVYKQNAWRIMAVSEYSFKSKKPLKSEWRGLTNEKLEKVSGIKGAIFVHATGFTGGSKTIEGVLEMAKKSMID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI35</accession>
    <name>A0ABV2AI35_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001187</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000259">
        <property type="protein sequence ID" value="MES1919337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="87"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="173"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="201"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="29160" checksum="D114E37A65ECBF5E" modified="2025-10-08" version="1">MKSAKRIAKQLKRTKTPKSAMSKKPSQSIKTVETNKKTAKKINKKERRRRTSQKRSIKTMSNNGDKNIKRSVKKTINKKQVLSNKNGNKKSMKKVNKKSTKKSIKKRSKKSIKPKKIYDSCYSSDSDPDNPGVSSAMLYYNIVSAPRAPGKRKIKARDEAISTNIGGGGKSDDDWEGDVDEFPESDSRNVSSEYYSDSTDSTEKESGSGKDNSAEEEKIEGKSNQIDLSDNNDEIEQEVNGKKIKESKQKIKNNEAIVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIF6</accession>
    <name>A0ABV2AIF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001289</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000296">
        <property type="protein sequence ID" value="MES1919459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="290" mass="32964" checksum="40B10375D0CC107D" modified="2025-10-08" version="1">MPDGENGVFGCKSVSEANKKHCNFNFENLIDLEYNVKSIGTDQTVKAQCSKINFKFHIGCYNGYIINTSSLLPITSWYCDNICNLASLNDFLGSKSALFLRNINFVEKSYFENSGIYGKVACAPKKMMNTFDSTLFDVECFEGNWIVSYGDSSSNCVEFCSLNEFENLLKKTNVLPKTKDCILNPELIQSGANIFERKCALICRYGYQSPNNNNLGEIECRNYRFIHISSEKVDTNPKIIIDSMCRDTKTKTCDYEALSSSEINEEREKTLRDYLKDCEGKEDEWGDCVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG2</accession>
    <name>A0ABV2AIG2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000280">
        <property type="protein sequence ID" value="MES1919407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047623">
        <property type="entry name" value="SatP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30178">
        <property type="entry name" value="INNER MEMBRANE PROTEIN YAAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30178:SF3">
        <property type="entry name" value="SUCCINATE-ACETATE_PROTON SYMPORTER SATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="223"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="26888" checksum="1A9CB6B7DC6D24FF" modified="2025-10-08" version="1">METETTNIRKVNCKTADSTSTGFFAFSTASIFYGLSLSEAIPFSALSMLYSLVFGGFLQILCGFNQFLNGDVFYGTFFTVFGAHWILQYFVDILVVDSKNAIVDSVLWAAISIVFAVNSLDKNWIIILFLGELVAYFFVEMIVMAVGKGRVAMGVFLTLIGLSSFFLASVEFTVQNGGISVGDKFKIFATKRDCSISKFLLILMFDIIFIGEEPSSLKRFDDVVNVISGTIYCFIFIYSNEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIK7</accession>
    <name>A0ABV2AIK7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001328</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000312">
        <property type="protein sequence ID" value="MES1919510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="202" mass="23889" checksum="9EB7BE8379FFA0CB" modified="2025-10-08" version="1">MFFNEKFPYKKIIDLKTSSISTIESYPFYDKIFEIKRPEDRFFRLTNEIQNLLSPEFISGVFGPSLIAISTCFLKNNKPWKYFFYLFFRDDISSWLNLNRKDFKVGNDGAVQLGKQNLLEAQIKKAIGKNTYDVMNQISSFIKYDSVDSEVKEMVTGDVYNFICKLKNLKVKTISEKTKKFLDESMDENRFVFYFKEFANCH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW1</accession>
    <name>A0ABV2AIW1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001421</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000344">
        <property type="protein sequence ID" value="MES1919623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="22514" checksum="C690D52F7BAA0FB8" modified="2025-10-08" version="1" fragment="single">MLGLGGLGYSGLQSGLELSRSIFANRSHKRLESEADEVYRDPSYLTTGLMDRLRTDLNTVRDFVGLYEGNNTITSPGNMSQLSTGYTNFSELFDPSKIDQNMRLINSRIAKQREEEKAQEIRNMIGSDTTGALSGITEAIQSVAPENISFLSRARDVFRRIDPTTTSQNFVLATYADKLFDNYMSKKNKNTKDAIRDSIDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ08</accession>
    <name>A0ABV2AJ08_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001461</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000362">
        <property type="protein sequence ID" value="MES1919671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="106"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="19175" checksum="B71CFDAE6BE8008A" modified="2025-10-08" version="1">MKIKPLIQFYESKSLFSSKNIVSEKKIAIQNFSSTIQSNKNAKQRLKIKRLKAERIKMFKIISTVLSIARKLDHKELSQTATSFLEEIKLSGEKYFAVKSKKIAMARSRKERLDKLEEKMDCLDMKLEVLVRQCAENQEDVFARISKLYSSVKDLFGLFGAVLANF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE1</accession>
    <name>A0ABV2AJE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001556</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000401">
        <property type="protein sequence ID" value="MES1919790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12704" checksum="51E24EDF8D29F42E" modified="2025-10-08" version="1" fragment="single">TMKMTLDKEKSRYEQLRLQLREMDPSYVIGSPPIPTAVHQLDATNLNFMTRVTSPLECMTPPVPSQMFTQNNESPFVMSNSSVLGNMVNPNNVPTIFDESKLKSEIEKVQIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK49</accession>
    <name>A0ABV2AK49_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glucokinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001765</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000486">
        <property type="protein sequence ID" value="MES1920038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd24008">
        <property type="entry name" value="ASKHA_NBD_GLK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.367.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003836">
        <property type="entry name" value="Glucokinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47363:SF1">
        <property type="entry name" value="GLUCOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02685">
        <property type="entry name" value="Glucokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="256" mass="28545" checksum="5018A36590BD99FD" modified="2025-10-08" version="1">MPFYYVAGDIGGTNARLHLYLVPEKGDEELIAERYYKSQDFNSLTAIVFRFLSDVNMEEIPNSACFSLAGPVKNGIVKLTNIGWSSISEKEMESELGIKKITFLNDFAANGYGIQLLEKEDLFEISNNKLPEPNGPKVIIGAGTGLGEAFIFRKDSESIVVPGEGGHTDFAPRNKIEFDLMIYIRKKINLSRVGVERVISGPGIEMIYWFFVDNNPGLENKEVSDIIRSDRTPGKIISEFAIGKKVKNIKIVCSHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK70</accession>
    <name>A0ABV2AK70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001778</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000494">
        <property type="protein sequence ID" value="MES1920053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="402" mass="46242" checksum="2F36BF4D59A5040C" modified="2025-10-08" version="1">MKFCDLPPNSLTEDFKSNANCHLDSNNKFAGVCETISNSIFFVEFYNSRESSNSRLECNDSYNKNLYMRKKFINLPSCEGVVFNADSCEKRDNQFYKEGCKITFNENKVYSQNFSDNFVLNTKNVNNLCGSIYTSCNIPDNVDTGNDCITKNNMFIQTCQFSAQDSYAFKNGMDFKKTHELRCPFTSNNFILVEGCNTQFLGDKSLNSNDCTIIGLYIFGNCDLSYNHIQFQNENNKLEQYFKYRCSEGNDNSRDIVPVKGCPVSNTNEIKLHTCNIIDGYFYLECEFKLPKGYQYLNSNGEYKDRLNRKCSINGIQDKTDFVIEKGCVLPTLNIENKLLFGTDCFIKEGYYYRTCSVEAEENYLIKLDSSFVEMFELKCVKGIANLETIIVVHCFFVIKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK87</accession>
    <name>A0ABV2AK87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Coilin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001636</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000433">
        <property type="protein sequence ID" value="MES1919884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="257" mass="30297" checksum="5280AB139090CBEB" modified="2025-10-08" version="1">MENVTRIKIIDKNKKYLINLPNKIKKIKHLKKYLKQKLTLKSNFALFLKMGENDLYELLDFSGICVVRDSETILIFDENNNLKKEKKKRNNKIVKKIETVNMEKLNLSAKKRFKGKHVRFEDKKTDEESANSSDSIEQALIDFEKKKLPTSKEQFFAPRFLKNRKITKKTKITEKKLNGKPIESNNLKKGDKIAFKKLILNESTWQPSLSQYIECVVEAIENEKIIYKLINHKNKNEDIFGEISMKEMQQIILINFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD4</accession>
    <name>A0ABV2AKD4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">proton-translocating NAD(P)(+) transhydrogenase</fullName>
            <ecNumber evidence="2">7.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_001845</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>NAD(+) + NADPH + H(+)(in) = NADH + NADP(+) + H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000524">
        <property type="protein sequence ID" value="MES1920130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1220">
        <property type="entry name" value="TPP-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034300">
        <property type="entry name" value="PNTB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160">
        <property type="entry name" value="NAD(P) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10160:SF19">
        <property type="entry name" value="PROTON-TRANSLOCATING NAD(P)(+) TRANSHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02233">
        <property type="entry name" value="PNTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="DHS-like NAD/FAD-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="95"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="143"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="NADP transhydrogenase beta-like" evidence="11">
        <location>
            <begin position="1"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="391" mass="40146" checksum="EE8341F9B1DCC7BE" modified="2025-10-08" version="1" fragment="single">GAAGGLEIANRASVVSLPQLTAAMHSCVGAAAALTSIASFMSGCGEIDDTVHSVACCAGTFMGSVTFAGSVVAYLKLQGLLKSQPLDLPNKNMLNIGLVSGSAALAAYVVSGGVLSVPALFLMAGGSGLMGAHMTASIGGADMPVVITVLNSYSGWALCAEGFMLQNDLLTITGALVGSSGAILSYIMCKAMNRSLPNVILGGFGTKASKAVSSKGEAKTVTTDGAVQLLSEAKDVIITPGYGLAVAKAQYPVAELVKKLKENGARVRFAIHPVAGRMPGQMNVLLAEAGVPYDIVEEMEEINDDFKKADLAIVIGANDTVNSAATEDPQSPIAGMPVLRVWDAKKVLVMKRSLGVGYAAIDNPVFYKDNCSMFLGDAKSSCEKLVRGISD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKG8</accession>
    <name>A0ABV2AKG8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein uL23 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001535</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000391">
        <property type="protein sequence ID" value="MES1919762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013025">
        <property type="entry name" value="Ribosomal_uL23-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_uL23/eL15/eS24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005633">
        <property type="entry name" value="Ribosomal_uL23_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11620">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L23A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03939">
        <property type="entry name" value="Ribosomal_L23eN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="Ribosomal proteins S24e, L23 and L15e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL23 N-terminal" evidence="4">
        <location>
            <begin position="6"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16529" checksum="E64F7FD0723D26BC" modified="2025-10-08" version="1">MSKDNSAKAKNIAKIAKMGPFKKTKKVRKSVHFRLPKTLKLDRKPKYPKKAIPTKNKYGDLSLFKRALSTEKAIAEVENRNTIVMYFDNRATKHQIRRTIEKMNLFKAQKIRTLLDMTGDKKVYVRLDSEEDALAVSEKLGVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKX1</accession>
    <name>A0ABV2AKX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001816</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000512">
        <property type="protein sequence ID" value="MES1920099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="66" mass="7577" checksum="B6659F7AF9D45DF2" modified="2025-10-08" version="1">MLISENNLYKNIKNLTENSTGEDVFGHNLKILLRPPTLKTENFSLEIDIFELRDLPKMDLTNNGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL43</accession>
    <name>A0ABV2AL43_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquitin carboxyl-terminal hydrolase 22</fullName>
            <ecNumber evidence="2">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">USP22</name>
        <name evidence="2" type="ORF">MHBO_002057</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000639">
        <property type="protein sequence ID" value="MES1920380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13249" checksum="9511437EBF7E70E9" modified="2025-10-08" version="1" fragment="single">TVTTPAKIERIPKILCLHLSRGLQNAKNNKFVKFDAIISDDYYPFLYDFKFKYVLSAVIEHRGFLFEGHYIAYVKNNNNWYKCSDSKIEYSNIDEVLRTQAYILFYEYESH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL65</accession>
    <name>A0ABV2AL65_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001853</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000528">
        <property type="protein sequence ID" value="MES1920138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12383">
        <property type="entry name" value="RRM_RBM42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050825">
        <property type="entry name" value="RBM42_RBP45_47-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034215">
        <property type="entry name" value="RBM42_RRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47640:SF11">
        <property type="entry name" value="RNA-BINDING PROTEIN 42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47640">
        <property type="entry name" value="TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="126"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="211" mass="24662" checksum="D039B1D67F21DA14" modified="2025-10-08" version="1">MDDAALKEFEKEIENIEYETELKKREKPSIKNAIFSRKPTTISSTKPISQENKISEKVSKNAFKIENAVFDVQSLPKRMVKHEELVKKDKRFKKMLKEGGTLKSLRSACGKVWKDETISDWPEDDYRLFCGNLGNEVTDDTLKSAFNKYPSFCKARVIREKRTNKSKGYGFVSFLNSADYTKAFREMNRKFVGNRPIKLQKSKWRNRQVIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALE1</accession>
    <name>A0ABV2ALE1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">MORN repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001838</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000520">
        <property type="protein sequence ID" value="MES1920122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="18"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="186" mass="21801" checksum="3F7B52990247B4FC" modified="2025-10-08" version="1">MSELICEQKFEQILKQRLFELEKEILRQLADLKKWNKQRENRKSHKNEINEECYQREMICIFSKTKNDLNLLKKNLIDCRKDVKDIKSAIFENKKMGTFKKINKMIKDFKLFNSERGFGATNAVGTYNGQISEGLPDGEGEWTGIFFRFNGNWKKGVIDGIGVVTKLSNGEWFNGFWENGVLINKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALM2</accession>
    <name>A0ABV2ALM2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">60S ribosomal protein L7a</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPL7A</name>
        <name evidence="6" type="ORF">MHBO_002225</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Component of the ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eL8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000740">
        <property type="protein sequence ID" value="MES1920566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050257">
        <property type="entry name" value="eL8/uL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="Ribosomal_eL30-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004037">
        <property type="entry name" value="Ribosomal_eL8-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004038">
        <property type="entry name" value="Ribosomal_eL8/eL30/eS12/Gad45"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018492">
        <property type="entry name" value="Ribosomal_eL8/Nhp2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001921">
        <property type="entry name" value="Ribosomal_eL8_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23105">
        <property type="entry name" value="RIBOSOMAL PROTEIN L7AE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01248">
        <property type="entry name" value="Ribosomal_L7Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00881">
        <property type="entry name" value="L7ARS6FAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00882">
        <property type="entry name" value="RIBOSOMALL7A"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="L30e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01082">
        <property type="entry name" value="RIBOSOMAL_L7AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal protein eL8/eL30/eS12/Gadd45" evidence="5">
        <location>
            <begin position="115"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU367042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="29342" checksum="4A7BBD5B4FCD325A" modified="2025-10-08" version="1">MVLVKIDDAYKNRYRDVKLDHLFKARPKKFNHARQAPKKDFSRVVKWPKYIVIQRKKAILKKRLKIPPPVNQFSFTLNSNLTKSLYSLLKKYRPESTHEKKLRLKEAALQKIEDKTEKALKPSDKPYFVKYGLRHVTTLVEKKKAKLVVIAGDVDPLEMILFLPTLCRKMDVPYCIVRSKSMLGSFVHQKKVTCLAFTDVRKGKDEAVFEQLVKSVRANFNEVEFKKWGGGEMGKKSRAKVLKEKKFGETTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX5</accession>
    <name>A0ABV2ALX5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">mannose-6-phosphate isomerase</fullName>
            <ecNumber evidence="5">5.3.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_002327</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-mannose 6-phosphate = D-fructose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:12356"/>
            <dbReference type="ChEBI" id="CHEBI:58735"/>
            <dbReference type="ChEBI" id="CHEBI:61527"/>
            <dbReference type="EC" id="5.3.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Nucleotide-sugar biosynthesis; GDP-alpha-D-mannose biosynthesis; alpha-D-mannose 1-phosphate from D-fructose 6-phosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the mannose-6-phosphate isomerase type 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.8" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000803">
        <property type="protein sequence ID" value="MES1920681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07011">
        <property type="entry name" value="cupin_PMI_type_I_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.441.10">
        <property type="entry name" value="Phosphomannose Isomerase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001250">
        <property type="entry name" value="Man6P_Isoase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016305">
        <property type="entry name" value="Mannose-6-P_Isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018050">
        <property type="entry name" value="Pmannose_isomerase-type1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046457">
        <property type="entry name" value="PMI_typeI_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046458">
        <property type="entry name" value="PMI_typeI_hel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00218">
        <property type="entry name" value="manA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10309">
        <property type="entry name" value="MANNOSE-6-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10309:SF0">
        <property type="entry name" value="MANNOSE-6-PHOSPHATE ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20511">
        <property type="entry name" value="PMI_typeI_cat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20512">
        <property type="entry name" value="PMI_typeI_hel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001480">
        <property type="entry name" value="Mannose-6-phosphate_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00714">
        <property type="entry name" value="MAN6PISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00965">
        <property type="entry name" value="PMI_I_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Phosphomannose isomerase type I catalytic" evidence="9">
        <location>
            <begin position="4"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphomannose isomerase type I catalytic" evidence="9">
        <location>
            <begin position="64"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphomannose isomerase type I helical insertion" evidence="10">
        <location>
            <begin position="157"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF20511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF20512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="376" mass="42950" checksum="C336B8D9057E7880" modified="2025-10-08" version="1">MKFLDCEIKNYKWGKVGNESIIAQFCKEKTEDPNLNYAEWWFGTHQNGMSILKNEKLSLKFYLGRDLPFLFKILSVKTALSVQVHPSKEKAVLYNKEEPETYKDDNHKPEMCIAITKFVLLCGFRPFEDIVDDLAKFPEILVDILNLTDSKIREEMTTKQIFAKVFSFDSPKFPQILAKILSSSNLKQNFSDLVILLNRQYPNDIGVLAPFFLNKISLDPGEAIFIPNGTPHAYVQGDCYEAMACSDNVIRCGLTPKRKDLDRFVDCAEFSSGTEVLLIKPEIQNDFTTVYNSPENVGIEFFVEKMGSEKGENCLNCHENESILFVSEGKDLALKNDKNNERIIVNKGDILLIEQNEKIVAESNKNYELIRCCSNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM39</accession>
    <name>A0ABV2AM39_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DNA replication licensing factor MCM4</fullName>
            <ecNumber evidence="10">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">MCM4</name>
        <name evidence="13" type="ORF">MHBO_002385</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">Component of the MCM2-7 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the MCM family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000840">
        <property type="protein sequence ID" value="MES1920745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1640.10">
        <property type="entry name" value="mini-chromosome maintenance (MCM) complex, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008047">
        <property type="entry name" value="MCM_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018525">
        <property type="entry name" value="MCM_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027925">
        <property type="entry name" value="MCM_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033762">
        <property type="entry name" value="MCM_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF66">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14551">
        <property type="entry name" value="MCM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17207">
        <property type="entry name" value="MCM_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01657">
        <property type="entry name" value="MCMFAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01660">
        <property type="entry name" value="MCMPROTEIN4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00350">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00847">
        <property type="entry name" value="MCM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="5 10 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM C-terminal AAA(+) ATPase" evidence="12">
        <location>
            <begin position="382"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="8"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="39"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="621"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU368062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1920745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="621" mass="70786" checksum="5DC912BA1C8329FB" modified="2025-10-08" version="1" fragment="single">MSSPVHYPDSESQSRLRSESPETQRSISSHAKRHHPNSQREQTNSDRPSQNVESTIFADSQLSQINSQQFSQNENLQRFRNAQIWGTDIAVETCMSQFALFLREYRENSDSSPKYIELLQDIEENQIYHLMLNCKDLLSFNTNLYRQLVSYPQELLPLFDEEVNNLYRRKFPDDSSFERIQVKPFNLEKISRMRDIDPEDIDCLIAFKSMVTRVSAVIPEMKIGFFRCSKCAHETQIEVDRGRVAHPKACENTACKTRDSYSLVHNRSVFSDKQLVRAQETPETIPEGETPQTVEIFCYSDLIDSVKPGDRLIVTGVYRAVSIRVSRLQRNLKALYRGYVDALHFKKTLKHSFKVEEKSGEKNSEEGIDEKRLREISEDPEIYQKLVNSIAPSIWELEDVKRGLLCQLFGGVAKKRENKSFFRSEINVLLCGDPGTSKSQLLQYVHKISPRGIYTSGKGSSAVGLTASISRDPETRETVLESGALVLSDRGVCCIDEFDKMSDSARSVLHEVMEQQTISVAKAGVICTLNARTSVLAAANPHKSRYDAAMSVVDNITLPPALLSRFDLIYIVLDKPNERLDRKLAQHLIGLYKLEQEQKERDFLDAKTFAAYVALARKEVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMD8</accession>
    <name>A0ABV2AMD8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">40S ribosomal protein S7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">RPS7</name>
        <name evidence="5" type="ORF">MHBO_002261</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <reference evidence="5" key="2">
        <citation type="submission" date="2024-03" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Hiltunen-Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Burki F."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000761">
        <property type="protein sequence ID" value="MES1920609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="JBDODL010000761">
        <property type="protein sequence ID" value="MES1920610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000554">
        <property type="entry name" value="Ribosomal_eS7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11278">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11278:SF0">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN ES7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01251">
        <property type="entry name" value="Ribosomal_S7e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="196" mass="23357" checksum="B37FB383BECEEBAE" modified="2025-10-08" version="1">MANEKLEAHIKGKLYKSIDSPTQLDQTVAQALIDIERENKDIDLFRFQIISTREIDIQNNPKKALVIFYPYVLNTKVRKMQSKLTSLIERKMESYYVFLFPFRRILSVNNKRYKGNQNRPRNRALTNVYDKMLEDLIYPSQIAGRRTCMKMDQTRLFRVHLEARFKDSVEEKLPVFSAVYRKLTNRKTEFSFPEGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH6</accession>
    <name>A0ABV2AMH6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Symplekin C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002498</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000927">
        <property type="protein sequence ID" value="MES1920882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021850">
        <property type="entry name" value="Symplekin/Pta1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022075">
        <property type="entry name" value="Symplekin_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15245:SF20">
        <property type="entry name" value="SYMPLEKIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15245">
        <property type="entry name" value="SYMPLEKIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12295">
        <property type="entry name" value="Symplekin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81891">
        <property type="entry name" value="Poly A polymerase C-terminal region-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Symplekin C-terminal" evidence="1">
        <location>
            <begin position="143"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="412" mass="48603" checksum="A4ACAEF3ACBA1693" modified="2025-10-08" version="1">MGIVYELVFEDKNGVCDFAFNEIKNFLEICIKDERKFDILSRQKLLKSFIPKNDFRLLSIVISVLSSHLIRSLRFQDQNSPNKNDENFANENIETLTKIKDKKQNLTKNVTNILDEIENNKKLNQKISQIKISQNNENLVIYPIFPLLPKERIKKEFEKMVKETNLEELKKMIEYSFGYAHHLYCNNQNDQISFKTDKTDFSNLVKFLDLVDFDSFKKIEEIEENEKIGEHERKLAIWIFVKLHKLVNNKNDPNLLKTLELINHCLKKETIFNQKVLTEAVNKIMQGKETSILLMRTLIQIYLLYPGTIDLVKTVLTQLLRRKIWQSPSVWEGFVKCLAWTLPESMSVLTKLDSDLIKTAFKNDETFRTKLKEAFKKDGSLLFSLPSSLRRFLLSKDTMKRKSESYRKKRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMM4</accession>
    <name>A0ABV2AMM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bystin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000939">
        <property type="protein sequence ID" value="MES1920901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007955">
        <property type="entry name" value="Bystin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12821">
        <property type="entry name" value="BYSTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12821:SF0">
        <property type="entry name" value="BYSTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05291">
        <property type="entry name" value="Bystin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15081" checksum="22B40A97DA0B159C" modified="2025-10-08" version="1">MDKIEKINKKDIFKTGNIFEGNIADHVKFHFNEATDSSAAENGKTEQNELINPKIVELFQLLHFFNKSIGRALKQLHQGNLPKAMKAVPNLTNWEEIIDIANPFEWTPYAVQSVTKMFASNLKSEMAETFKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANA8</accession>
    <name>A0ABV2ANA8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">rRNA 2'-O-methyltransferase fibrillarin</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Histone-glutamine methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002726</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-glutaminyl-[histone H2A] + S-adenosyl-L-methionine = N(5)-methyl-L-glutaminyl-[histone H2A] + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:50904"/>
            <dbReference type="Rhea" id="RHEA-COMP:12837"/>
            <dbReference type="Rhea" id="RHEA-COMP:12839"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30011"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61891"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily. Fibrillarin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001112">
        <property type="protein sequence ID" value="MES1921151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000692">
        <property type="entry name" value="Fibrillarin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10335:SF17">
        <property type="entry name" value="FIBRILLARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10335">
        <property type="entry name" value="RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01269">
        <property type="entry name" value="Fibrillarin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00052">
        <property type="entry name" value="FIBRILLARIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM01206">
        <property type="entry name" value="Fibrillarin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="97" mass="10884" checksum="AEC4B6D2931EC332" modified="2025-10-08" version="1">MLVGMVDTIFSDVAQPDQARIVELNAKYFLKNDGHFVISIKANCVDSTASPEAVFAQEVAKLREWRFKPQEQVTLEPYERDHAVVVGTYRPASKGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM2</accession>
    <name>A0ABV2ANM2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002821</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001205">
        <property type="protein sequence ID" value="MES1921268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964:SF113">
        <property type="entry name" value="USPA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="24"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="159" mass="17909" checksum="0F3C5A22D77DDED1" modified="2025-10-08" version="1">MEGKGNKRVIINHLVVPKQMKDKRKILIAVDGSEHSTKCIEYAKKHICQKDDVVMFIRAIEKLAYPYLSVEISAKNQVLTRLADNMTAKCLDNFKDNERVGYLVQGVDFRTTLIEAADKLSPDLFIIGSRGKGAVKRLLLGSVSRYLLNHLNIPTLVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM9</accession>
    <name>A0ABV2ANM9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-arabinono-1,4-lactone oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ALO1</name>
        <name evidence="3" type="ORF">MHBO_002814</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001200">
        <property type="protein sequence ID" value="MES1921260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007173">
        <property type="entry name" value="ALO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010031">
        <property type="entry name" value="FAD_lactone_oxidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43762:SF1">
        <property type="entry name" value="D-ARABINONO-1,4-LACTONE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43762">
        <property type="entry name" value="L-GULONOLACTONE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04030">
        <property type="entry name" value="ALO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="2">
        <location>
            <begin position="16"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="28504" checksum="2ADA4E1A2BDC8419" modified="2025-10-08" version="1">MAKYINNSKFANWSKTNSCTPRYYDKPKTLFEIRKAIEFCKLNNVKMRICGSVTSPSDITMTDEFLLDTRGLDKIVSVDTTTSKSVLQSGVLLKDFVKTLSEKYFAAFPTLPSIMEQTIGGLLSTSSHGTGYAISSFSRYVSKMRIVDSNGELKVLRKDTDLFYAASTGLGLFGVIFDIELDIEKLFYLKSKQKSVETDFFYKNMIELAEKNEYFRAWTIPHINKTVIWEAEKIQYRSDLGDIRKFESF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANN6</accession>
    <name>A0ABV2ANN6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA_anti-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002833</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001215">
        <property type="protein sequence ID" value="MES1921283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024422">
        <property type="entry name" value="Protein_unknown_function_OB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12869">
        <property type="entry name" value="tRNA_anti-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="149" mass="16564" checksum="FAF6B80FA429F8DF" modified="2025-10-08" version="1">MDNKSNKKWFVISLVCIVIILSCICTLALSNNKANKQEEIIKVHALTLEQEYNDNEVAADQKYKDKWVYVFGTVQDIGKILNKSYITLEGKETTLSLSSAQCSFKGKNSEPIGSINKGDKVIVYGKCTGKVLCSVMFDDCQVAPQKEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANP9</accession>
    <name>A0ABV2ANP9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ycf15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002844</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001226">
        <property type="protein sequence ID" value="MES1921295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="65" mass="7310" checksum="B0DEF55DD7DA7332" modified="2025-10-08" version="1">MLRWHTNPSSLSTALTDRSFGFVTRPEEAPPQIRFGSDFVQIPNILQKRNKTGCLHDENSAVALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANQ0</accession>
    <name>A0ABV2ANQ0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BAR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002846</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001227">
        <property type="protein sequence ID" value="MES1921298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.60">
        <property type="entry name" value="Arfaptin homology (AH) domain/BAR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027267">
        <property type="entry name" value="AH/BAR_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103657">
        <property type="entry name" value="BAR/IMD domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="212" mass="24659" checksum="C6D5844AAED09A7F" modified="2025-10-08" version="1" fragment="single">MADKFSELFLDKTKQVEEQLVGGKNVTACSVSVLRRVSKLEAESGAMLRKLFNEELIQFKKSEGKDSMPTRKLYLEFLKMLRSMSALKKGFAAKLQNDLVPKFSTFNDEYERECKRIIKDFKGSRKNLGVIRKTMRSKNPNKIKAVEEKTIEFLEKAQELEEDRIETFKTCFEQYIKYNKSVIEQQKILSMKVDQISSSITKSNGIKYFCDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANV9</accession>
    <name>A0ABV2ANV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002671</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001068">
        <property type="protein sequence ID" value="MES1921083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24171:SF9">
        <property type="entry name" value="ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24171">
        <property type="entry name" value="ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="ANK" evidence="3">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="16582" checksum="BCCB53E56B75AC40" modified="2025-10-08" version="1">MPCTVPATIPKKKEMRRIESFGNLSSLMSASDVGDTDGIRDLVAESADLMLKNYDKRTALHLAAAKDHVEVIELLVNRYNGQKRHWKELSQTDRWGLTPLDLAYRKKALRSIEILEKCGAKRGSELKKNGEVLDKNDLNLIIFISSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP89</accession>
    <name>A0ABV2AP89_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cullin family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cullin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001418">
        <property type="protein sequence ID" value="MES1921497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.130">
        <property type="entry name" value="Cullin, Chain C, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045093">
        <property type="entry name" value="Cullin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059120">
        <property type="entry name" value="Cullin-like_AB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016158">
        <property type="entry name" value="Cullin_homology"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036317">
        <property type="entry name" value="Cullin_homology_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11932">
        <property type="entry name" value="CULLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26557">
        <property type="entry name" value="Cullin_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75632">
        <property type="entry name" value="Cullin homology domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50069">
        <property type="entry name" value="CULLIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cullin family profile" evidence="2">
        <location>
            <begin position="1"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21206" checksum="674C9A69EE3E0E0F" modified="2025-10-08" version="1">MLKDIDDSRKLDSIFNDYLEMNKIPNLLRPKLLSSSNWPKHQKQHFVKPRAMESFSLLFRDFCQNFGFKETLNFSHNIGSVVINADFDNCRNVKIVASPLQASILILLDSLNSITIVEMLNILKVDSVVFKRELKPLVHTRFCGILLKSPSKGYDPSHVLSVNKSCYPKENKITLPFGTTWFADD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX4</accession>
    <name>A0ABV2APX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001528">
        <property type="protein sequence ID" value="MES1921594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14691" checksum="0107B62BE21A78C0" modified="2025-10-08" version="1">MARKNRPKRKNRTKVDTYCEIDSLKKSSATSKELIVEQLTTAINQKSANEISEFEAKKELCLKYQRRFYGFDLSIIGISNSSLPPFSCRKRPLKQTRKRLNILRKKPKTGLCKKICCCLMAKSVLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ1</accession>
    <name>A0ABV2APZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003277</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001709">
        <property type="protein sequence ID" value="MES1921747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="12051" checksum="F0AFEFE95C2AE952" modified="2025-10-08" version="1">MRQSVYSIPRADSLASICFSKSLYDIGLGLPCPSYFIVSLKLGRAFVVVSPSHTGVQRGVLERNPLRGSYSAWTLSSHVQCSSSTNTSSSSHLSSHIPIPWTVYFNQILD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ83</accession>
    <name>A0ABV2AQ83_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003228</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001645">
        <property type="protein sequence ID" value="MES1921699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1060.10">
        <property type="entry name" value="Taq DNA Polymerase, Chain T, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002298">
        <property type="entry name" value="DNA_polymerase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133">
        <property type="entry name" value="DNA POLYMERASE I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133:SF62">
        <property type="entry name" value="DNA POLYMERASE THETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="381" mass="44036" checksum="3767A4B49602A70D" modified="2025-10-08" version="1" fragment="single">APKTISKKLGQKIVATAQLYLKRRIKNSICGIKSKLSPEKRIRNPNTVINLSPKVPRNAKSPMSFSAHLIDVCENEKIYQSFLSQVDKMDKIALNFWQRVDQEKEIEGISICFSSRKAFILNFGKLTNFDKTELIKKFLGNKELIIFDCKNKIKILSNFIKIEKLSDPLVAHWILSTGKEQGKLKLEDLHYLYLHSINRSKNVLSETKKIIGGVSQFSYVEQNNGRESWMTWQLCRYTDALLQKHSLLETFQEIEMKTSQILSELEKNGIEIDYKKCLSVLKIAHCRLKEIKKSFAKIIGEKSLKEINKILESDEKLSKLFFGKMGFKIPSDFDLEEQNFSKKTLLKMAETEILASLVLEFREIMVLLSKNLKPFARNAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQM4</accession>
    <name>A0ABV2AQM4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Calponin-homology (CH) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001999">
        <property type="protein sequence ID" value="MES1921965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.10">
        <property type="entry name" value="Calponin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001715">
        <property type="entry name" value="CH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036872">
        <property type="entry name" value="CH_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00307">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47576">
        <property type="entry name" value="Calponin-homology domain, CH-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50021">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calponin-homology (CH)" evidence="1">
        <location>
            <begin position="1"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="425" mass="47686" checksum="5EBCBB05EC3024AF" modified="2025-10-08" version="1" fragment="single">ELAKSLLAWANKVLKDYNLSLSDFKNWQDGKPFGALIHALQHKGPSGFEWNSNGDPEKQVGKSMQIAEDDHFIPRLMDPADLLNAIDLLSTMTLVGLIKNEYENGPQQRLKAKLRLALAKNSTFRKISDENQVVAKFEVVLKNFQGEPVPHCNDLEFLRFEAEHHPSSPDGSPQLLNCDVTAEQNGKYLMALLTDSPGSYHITAKFKDEMVQKPVSFDVESIEAEFEPAKRTFCLGKKSFAAIKVAGNDKVPPSALSINNSFIFKESEKSASNRTEVVETTAETPRKQSSFKPNVEVMEVLRGADNRLVVPFVGRICGECIFSGTIKGQKIRNDFAFRVEQPNYKARESDRNNYCPTDRQEFIVEAFDARGKLMDGFQPTAMIQLIEGLAVAQEKKDEIAVDEIGEESEIEMTKELKSKEKKMSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQV3</accession>
    <name>A0ABV2AQV3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Sm-like protein lsm7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">LSM7</name>
        <name evidence="10" type="ORF">MHBO_003271</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the snRNP Sm proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001704">
        <property type="protein sequence ID" value="MES1921742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01729">
        <property type="entry name" value="LSm7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017132">
        <property type="entry name" value="Lsm7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044641">
        <property type="entry name" value="Lsm7/SmG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10553">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10553:SF5">
        <property type="entry name" value="U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037188">
        <property type="entry name" value="U6_snRNA_Lsm7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Sm" evidence="9">
        <location>
            <begin position="7"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11146" checksum="14DF0B3F67DF2509" modified="2025-10-08" version="1">MNHSNKRSVFDLNDLINEKITVEFVGGRTLSGVLKGYDPLLNLVIDQGEENLQKDCEDSSKDVAKTRKLGLAVCKGNCVMTVYPQNGSKIIENPFTGNDDGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR80</accession>
    <name>A0ABV2AR80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003397</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001867">
        <property type="protein sequence ID" value="MES1921862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008081">
        <property type="entry name" value="Cytoplasmic_FMR1-int"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12195">
        <property type="entry name" value="CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05994">
        <property type="entry name" value="FragX_IP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF008153">
        <property type="entry name" value="FMR1_interacting"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01698">
        <property type="entry name" value="CYTOFMRPINTP"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="349" mass="41403" checksum="6C64E5DEACB5635F" modified="2025-10-08" version="1">MIYVTEKIMSHKKSFKKENTKKWENFLHHLNLYRFFYNFESFLYSVGDTSFLWFKEHNLSFSKCIQFPTHLSLPGTLFDFVTKMPKNVNFIFGIFKIYDDSAISAITVFKKKHLYEEIESEFSLLFDQFLYKFSRIIVNTALSFSARKKIPKWVKKGKDDNGNFKKIYFYKLLNISKTHTFDLLGRKIDLNRLITQQINHHLREALDYEIGRFEALGILASNELVCALDVFEEAVMIIRKELPINDFQPILEEVNESVGMYNFKGRIFNTMNESIIDDVFPNFAYSRGSNSFVRVNGVEEEKQRDIEKKFDRFEIIYGKFHKLYRKKFGKVAGCLKFVVWQIIILKAIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR92</accession>
    <name>A0ABV2AR92_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003411</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001890">
        <property type="protein sequence ID" value="MES1921877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="257" mass="29541" checksum="1F16ED7DC38AC962" modified="2025-10-08" version="1" fragment="single">LNYIKLAVMAVFEKSRCRCCFKKKKVYPHPRNYYGGKPSTCFNCIVAIKKSSNSPDCLCNVCGEGDIRLFHCYTQNCAKYFCLGCIAANYGKTATKNILKQINSKKWHCFACTPSFHNRCLDQIDLEYRGSFGGFTPKTFVPVTKLFSSFRKNDLFRLSKKPKNGPYNVISVVWFVDNSSLFGEKYLRLKKKSQVTAYVLGLARNVEALTKAFPEWRLRVYYDNSVMAAYPEIAPNIIKAFVKHPFVEVYQVPNWPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD1</accession>
    <name>A0ABV2ARD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003737</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002429">
        <property type="protein sequence ID" value="MES1922228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="60" mass="6418" checksum="2002DE9972144D11" modified="2025-10-08" version="1" fragment="single">DPGSTDSNADSPNKDDPQVPGLEGTVEELMIRKMPPSMSKYLLESLGKDINDLPNSGNSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD5</accession>
    <name>A0ABV2ARD5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003728</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002405">
        <property type="protein sequence ID" value="MES1922219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="18595" checksum="1081938312D42C74" modified="2025-10-08" version="1">MRRGRPRIHSHTSFDLQQSETCDIIVTGYSENVLKIEAKSEGKIKRGFLFVPKVVEKSQSESPSPPSISFDSSETAIEVELSDPKNSDSIFSKKSVETGPTKRKFSKENRSKNLNDFEKSVEKLANEINVNGNVGNPHFETVLEVKFALKKAAISSQHLARQIGVAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARM9</accession>
    <name>A0ABV2ARM9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase protein MI25</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003828</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002583">
        <property type="protein sequence ID" value="MES1922320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="196" mass="23467" checksum="61FE0B06B4BB691F" modified="2025-10-08" version="1">MFSNYSRRFSVKSIITKKESPTSKSPVNNKKSFKNNFKPIEKYEAPKEPYYKEILYSKERSRPPPKSFLDFLTRFSAEAFSFFMAGILLANTIALFSTINNHKREINIWKERLKKLKKDGDRVRELQVSERNQIRKILISKQTNLQNKNEILSKISQIYKNNDQILVEHNEDKRVDIYENERKVERIRKIEEKVFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARQ8</accession>
    <name>A0ABV2ARQ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">UMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002632">
        <property type="protein sequence ID" value="MES1922348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="9"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="19"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="111" mass="12674" checksum="4E3AC5CCF7D934F2" modified="2025-10-08" version="1">MFFIFNKFKDRYGYAAPPSTKSDSQTTSEDSDDESSLPNTRLVRQNAQRGIRPTQIQKTNEKKQNPNSSTRDLKINPLYVPADEFGRSVYSLATSIPTEESGYYVYDEVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARR6</accession>
    <name>A0ABV2ARR6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002153">
        <property type="protein sequence ID" value="MES1922057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046514283" description="Secreted protein" evidence="1">
        <location>
            <begin position="19"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="102" mass="10301" checksum="C7EC733E5D58381F" modified="2025-10-08" version="1">MGVVVLETVGVLVTNALATDVLVTDALVTDALATDALVTDALVTDVLVADVLVAEDNAIFVLEVVVGTSGAAVTNTECSASINAGRSTWCVCRLTSSCTLCV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS3</accession>
    <name>A0ABV2ARS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003747</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002452">
        <property type="protein sequence ID" value="MES1922239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3790.10">
        <property type="entry name" value="NinB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036619">
        <property type="entry name" value="NinB_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="161" mass="19157" checksum="890EBB0FC7D11DCF" modified="2025-10-08" version="1">MPEQKTYWDIRRVEGKRIVLELFDQNNMVLRMAEKFLKNNAVRARLSATFRPESGKKTNPQMRYYRGHLLPCIHDAMVELGNNFEIDQTHDLLKDMFYNERMYIEGLDQEMKIHESLASAGKERMSKFINKCFVFAREDLGILVHTPEEYYSMIKKLSEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARS5</accession>
    <name>A0ABV2ARS5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002665">
        <property type="protein sequence ID" value="MES1922365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006329">
        <property type="entry name" value="AMPD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11359">
        <property type="entry name" value="AMP DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11359:SF0">
        <property type="entry name" value="AMP DEAMINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19326">
        <property type="entry name" value="AMP_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="Metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13125" checksum="A1AD25462EFDCC5F" modified="2025-10-08" version="1">MIQIPRLFEIYKANKLLNSFQDMLSNIFQPIFEATLDPQSHPKIFKFLQLNDESVLEIIDYKTKPQDWDHSENPSYAVYAYYIYANVSSLNRLRKSRGLNTFSFRPHSGFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ2</accession>
    <name>A0ABV2ARZ2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transducin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003959</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002827">
        <property type="protein sequence ID" value="MES1922444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="83" mass="9335" checksum="339D4CDD687D2F6A" modified="2025-10-08" version="1" fragment="single">MKRIAVRCEWISQKLDFDVWDARFCPQGDILAAAGDGAKVCFFNTNETLETSQNETTALEIKGTEKVSQLEWSPDGRFLLCCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASN3</accession>
    <name>A0ABV2ASN3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein transport protein SEC23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasmic vesicle</location>
            <location evidence="1">COPII-coated vesicle membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the SEC23/SEC24 family. SEC23 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003413">
        <property type="protein sequence ID" value="MES1922683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037364">
        <property type="entry name" value="Sec23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006896">
        <property type="entry name" value="Sec23/24_trunk_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141:SF0">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04811">
        <property type="entry name" value="Sec23_trunk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="1" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="1" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Sec23/Sec24 trunk" evidence="2">
        <location>
            <begin position="5"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14865" checksum="AE2C9AED99C398B3" modified="2025-10-08" version="1">MSPAELEQLKDSLYQSFSLLPENALVGLITFGKHVYIHELGFSECSKCYAFSSAGEELKDKNRMRELLGFFPNSKETVMSRFLVPVEDCEFVLMTVLEELERDDSSINAKMRPSRCTGFNSKFRFFRLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AST2</accession>
    <name>A0ABV2AST2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003963</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002838">
        <property type="protein sequence ID" value="MES1922448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="24494" checksum="CB0E9FB3AE2D37B0" modified="2025-10-08" version="1">MNTTLKDKFEKDEIRVRELVLKGIIHASETRNFCDLLRFTQNYLAVGGRLEDIEIITFKKDFEKLTHLLKSEFYNHPTRDPNLKKQTAEMFYANFYEKFKCVAIESSDKANFLGDACGLIDMFIPLIETIEKRPEFILPEITENSVLKYYVDQSLTLLNHEEVKIFPECYYENHEVSELKDKLVRFVHQEAKQSGFINTLNKTLFMNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT49</accession>
    <name>A0ABV2AT49_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004377</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003882">
        <property type="protein sequence ID" value="MES1922849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9018" checksum="4A3BEB5373B78D49" modified="2025-10-08" version="1" fragment="single">IIEIYGEYLLVNVAIDSSSLMEAKKDTTEIFRAKLGPVLNYLTTKTLIFTNLLTGAILCFAVSMTVIGNNGGDAIIYSFFSST</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT52</accession>
    <name>A0ABV2AT52_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquitin carboxyl-terminal hydrolase 20</fullName>
            <ecNumber evidence="2">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">USP20_1</name>
        <name evidence="2" type="ORF">MHBO_004376</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010003873">
        <property type="protein sequence ID" value="MES1922848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2230.10">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035927">
        <property type="entry name" value="DUSP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006615">
        <property type="entry name" value="Pept_C19_DUSP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06337">
        <property type="entry name" value="DUSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00695">
        <property type="entry name" value="DUSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143791">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51283">
        <property type="entry name" value="DUSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUSP" evidence="1">
        <location>
            <begin position="93"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="22878" checksum="4B22B61AD37D2093" modified="2025-10-08" version="1">MILDDPGPLESRELLCKHAMKTEKICQKSTTDNIFGWHDIAYEITTSQLNALNKRFGNPLTVAKTTLEHDNVGEGKVAPNENCEECEKEKLLRRKKRERNKIISLEKAFKLSKESVTYVVSESWMRAWRCFVNDETNLVPGPIFNEHLLGTDKKMNLDLKIEKDYRVLSKEVWDYLLEIYGGGPEIVNDFISDKDLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT59</accession>
    <name>A0ABV2AT59_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004353</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003827">
        <property type="protein sequence ID" value="MES1922827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="entry name" value="Ribonuclease Z/Hydroxyacylglutathione hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46018">
        <property type="entry name" value="ZINC PHOSPHODIESTERASE ELAC PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46018:SF2">
        <property type="entry name" value="ZINC PHOSPHODIESTERASE ELAC PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19543" checksum="EEC3C4B0A9B8CBA6" modified="2025-10-08" version="1" fragment="single">KAGILKINVEKAVKLGLPKSSPIYGKILRGKEIAFGNKTIRPEQISYIDPNCKKFVFLQDTFESESALEQASNCDILVHECTFDDNYIEQAIMWKHSTASMAGEYANSAKARNLILTHFSTRYKMDQTESKIFEEEAKRHCPETKVLIAHDLMNIKRKGADFVIEGTEEILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT75</accession>
    <name>A0ABV2AT75_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004096</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003145">
        <property type="protein sequence ID" value="MES1922582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="110"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="139" mass="15879" checksum="428EB4612DF687CC" modified="2025-10-08" version="1" fragment="single">MDETLKDQTNPEEVTETTAQTEAEQKQDTTPEEPKHKVKYNGEEIELSVSDLITNAQKGMNYDHVHEDLENTRKTSATAKAELDALTAALNQYGYDGSAQEIADMLTAQQRETTPDEVRKEREQEETKQQENQKFMDEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB0</accession>
    <name>A0ABV2ATB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004423</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003976">
        <property type="protein sequence ID" value="MES1922892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15052" checksum="CD7038BABA9B92D3" modified="2025-10-08" version="1">MNYKGPLDPNGALFKSLSDNSINETTFVDEKESKNLLSISTDLSKNNETFFNEKEKSDYLKMETDFLIKLERPFCFYVGKENEEERVQNKETGRNLDQYLIEFLIDSIAQTKVLNRRSLKDDISISKSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATK2</accession>
    <name>A0ABV2ATK2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004531</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004293">
        <property type="protein sequence ID" value="MES1922999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="56" mass="6157" checksum="591E079E4569AFCA" modified="2025-10-08" version="1" fragment="single">MSIPRYTVKNTSRCNLIKCSVLHDGHGVARCLCISHTQEARLVEQVSPGLIPTVSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV9</accession>
    <name>A0ABV2ATV9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Maturase K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004599</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004518">
        <property type="protein sequence ID" value="MES1923064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="84" mass="9989" checksum="AB019B0A877C4444" modified="2025-10-08" version="1" fragment="single">NFHPICVLISYVHHANLATRWHQSRTRRIERRRGYLYEELFIKLDLNRLRNATSRYTFLADLTSHVGFLIVDGPRNANFLISFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY4</accession>
    <name>A0ABV2ATY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">RNA recognition motif</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">exc-7_3</name>
        <name evidence="10" type="ORF">MHBO_004670</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004782">
        <property type="protein sequence ID" value="MES1923128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002343">
        <property type="entry name" value="Hud_Sxl_RNA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041367">
        <property type="entry name" value="Znf-CCCH_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18044">
        <property type="entry name" value="zf-CCCH_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00961">
        <property type="entry name" value="HUDSXLRNA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 7" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RRM" evidence="8">
        <location>
            <begin position="4"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="9">
        <location>
            <begin position="93"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="7">
        <location>
            <begin position="93"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1923128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="17770" checksum="AF1365A1CD6F67A2" modified="2025-10-08" version="1">MSRTNLYVSQFPREWGSDKLEILFAKFGQIDKIRILTPENAEKNRGVGFVHFKEAASAFAAMTATQNFTPKNCFKPIIVKFANQGAKPPRVLNAGPNVCRFWAKGECARGELCNFKHDSYETREEFGVSGAFGGVGGFGAAPLGAFYKGGDVGVAGKAEGFFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ2</accession>
    <name>A0ABV2ATZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004679</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004862">
        <property type="protein sequence ID" value="MES1923136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6691" checksum="5D190F6D937F45F6" modified="2025-10-08" version="1">MSEKDTLGVQGKHEQKNKKQEQEEEKQDQEEEKHEQKEGKHEQKEETNNGNVADEGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU79</accession>
    <name>A0ABV2AU79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004782</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005242">
        <property type="protein sequence ID" value="MES1923238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02883">
        <property type="entry name" value="NUDIX_Hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.79.10">
        <property type="entry name" value="Nucleoside Triphosphate Pyrophosphohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="Nudix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15319" checksum="7E2DD02970D28BF1" modified="2025-10-08" version="1">MAHFVPTDIKDASLVVIHNSETGNIVNFERADGEDGIICGGVDEGEGLIDAAVRDAKEECGLVIDEEETTYLFSMLAPGGKVMVHCYYYDVAKESDPEVFIGEEFATEGKPSWTNPLSFLDDSSGKFKDFNTVLLSTIGLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUB5</accession>
    <name>A0ABV2AUB5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Recombination activating protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_004816</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005392">
        <property type="protein sequence ID" value="MES1923270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="entry name" value="TolB, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001258">
        <property type="entry name" value="NHL_repeat"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101898">
        <property type="entry name" value="NHL repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51125">
        <property type="entry name" value="NHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="NHL" evidence="2">
        <location>
            <begin position="4"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="83"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="83"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="100"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="118" mass="13526" checksum="FFC009554AC3E306" modified="2025-10-08" version="1" fragment="single">SHFCPRALCADVLGHVLVSDCHNDSVYLLDQDGNFLSLLLTQEIHEIYHPTALCVDDQHNLYIGQEYSNTICVYKYLQNTDVKHSTDQKHYSKNTEIRAPKRLGKKRSNKVGDPFYAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUJ2</accession>
    <name>A0ABV2AUJ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005624">
        <property type="protein sequence ID" value="MES1923325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="172"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="182"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21278" checksum="04306428C4498883" modified="2025-10-08" version="1" fragment="single">MGYEMVQRNDGKPFAERLQDVRESMPITTPENAADILKARTSAEKMIGQQFKTFQKDPAGYADKELPEGLSGENRIRARLERQNQLAKGIPGFQASVLSETEKKLFQRKWEETEDSRGKLDYLMSIENEYGAYASTAFEDIGIPTSATVAVDLFNMAKSSDADSRLLITAATTKPGDIPQDPSFTETNVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS0</accession>
    <name>A0ABV2AUS0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">E3 SUMO-protein ligase RanBP2, variant 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">RANBP2</name>
        <name evidence="2" type="ORF">MHBO_004976</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006052">
        <property type="protein sequence ID" value="MES1923410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000156">
        <property type="entry name" value="Ran_bind_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045255">
        <property type="entry name" value="RanBP1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23138:SF87">
        <property type="entry name" value="E3 SUMO-PROTEIN LIGASE RANBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23138">
        <property type="entry name" value="RAN BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00638">
        <property type="entry name" value="Ran_BP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00160">
        <property type="entry name" value="RanBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50196">
        <property type="entry name" value="RANBD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RanBD1" evidence="1">
        <location>
            <begin position="13"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="10594" checksum="1FBA9EEF8981B465" modified="2025-10-08" version="1">MESELSKKINKKIDEKISSKIITGEEDENLIYKQKVKLYRFAPETKEWKERGIGFFTFLQHKEKHSVRAVLREDKTFKVRLNHSSLAKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS2</accession>
    <name>A0ABV2AUS2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">40S ribosomal protein S26</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RPS26</name>
        <name evidence="6" type="ORF">MHBO_004987</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS26 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006107">
        <property type="protein sequence ID" value="MES1923420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1740.20">
        <property type="entry name" value="Ribosomal protein S26e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000892">
        <property type="entry name" value="Ribosomal_eS26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047864">
        <property type="entry name" value="Ribosomal_eS26_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038551">
        <property type="entry name" value="Ribosomal_eS26_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12538">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12538:SF0">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01283">
        <property type="entry name" value="Ribosomal_S26e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00733">
        <property type="entry name" value="RIBOSOMAL_S26E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="86"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="87"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1923420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13487" checksum="CC7A6EBDE5664E60" modified="2025-10-08" version="1" fragment="single">MTKKRRNNGKDRCNRGHVKPVRCSNCSRCVAKDKAVRKLMVRNMVEIAAQKDIIENSAYEEMEIPKFYINLSYCISCAIHLRLVRGRSKEDRKNREPPQRRRMFDSKKKEEKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUU8</accession>
    <name>A0ABV2AUU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribosomal protein L27</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_005023</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bL27 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006255">
        <property type="protein sequence ID" value="MES1923450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001684">
        <property type="entry name" value="Ribosomal_bL27"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15893:SF0">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN BL27M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15893">
        <property type="entry name" value="RIBOSOMAL PROTEIN L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01016">
        <property type="entry name" value="Ribosomal_L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00063">
        <property type="entry name" value="RIBOSOMALL27"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110324">
        <property type="entry name" value="Ribosomal L27 protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="8"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="9"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="21"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="178" mass="20583" checksum="A4C5075ACB553F45" modified="2025-10-08" version="1">MFFGLLKLSTRNATKTSKGNTKSKRSPAGKRLGLKKWNQQPVISGNIILRQKGMKWRPGQNVGMGRDQTIFSFITGRVAFTKEKVKTFRGMKRKTFVHVVRPGDDVSLFSTERSNRKTWKKPCPLNLKWDEIFLSNELKEKALKMMENDLSERERAGLKRFSRFSQEMIAKLRDKSAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV30</accession>
    <name>A0ABV2AV30_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005097</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006596">
        <property type="protein sequence ID" value="MES1923515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="9612" checksum="00FD6D74D68A08EF" modified="2025-10-08" version="1">MNEECDHEMLMNDLCVQCGKDLSGLSFKQSENGESKRKSTKKDKLFSVVLGKNKKLFFSKDVFSQILRKSKKRFGRTRSRCSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV64</accession>
    <name>A0ABV2AV64_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Histidine kinase/HSP90-like ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005134</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006801">
        <property type="protein sequence ID" value="MES1923545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16917">
        <property type="entry name" value="HATPase_UhpB-NarQ-NarX-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050482">
        <property type="entry name" value="Sensor_HK_TwoCompSys"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24421">
        <property type="entry name" value="NITRATE/NITRITE SENSOR PROTEIN NARX-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase/HSP90-like ATPase" evidence="3">
        <location>
            <begin position="2"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="9960" checksum="A853A9CF923BEA6A" modified="2025-10-08" version="1">MRIVQEAVVNCIKHSRATALTFSASVTEEKPGQIIIEVRDNGQGFDSGTDCSKRGRGLRNMRYRAQQLGAALNVKNNTEGTVVQLALATANI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV78</accession>
    <name>A0ABV2AV78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005152</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006904">
        <property type="protein sequence ID" value="MES1923560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="14452" checksum="F9D3C8EC9A6B8263" modified="2025-10-08" version="1">MLNEKDLMLFQDVRNRISDRLSRDLEVLIFDAQQSQKINSFVNRNKQKLDNFDHNSDKNPKKALFKETLNCLIASSDSWDESIFEKTELDSVKLPMKTKKIFDEYEEEYKKIKVQNIFSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA5</accession>
    <name>A0ABV2AVA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005188</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007040">
        <property type="protein sequence ID" value="MES1923590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16823" checksum="83482090607AD7A3" modified="2025-10-08" version="1" fragment="single">NIILTDCNRTQFSQKLFVIMENRFLDRRNTVNPVVVLDEPSKETSFNHLINPLNAVSELDQKPILHHFSDNRNTLNQTVSPEEQNNFKQKIRSALTNNKIKIESEETINIYYNAINDKIVKAVEKIIFYSKRRLDQLKDYQNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC8</accession>
    <name>A0ABV2AVC8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005238</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007285">
        <property type="protein sequence ID" value="MES1923629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15851" checksum="198C369F70772900" modified="2025-10-08" version="1">MVGRPVINRLIIQLCLTNIGISFSREDRSSSSPYNNFLSNKSNGPLPVMRGSDCLPRSRFGDQYATKFAFNLNRWNRRHFEVDDEDKFLVPTFARFFEREKFALRHFIDRNSPARVYKVDAQQSVKSRTRVYLLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVX7</accession>
    <name>A0ABV2AVX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_005073</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006461">
        <property type="protein sequence ID" value="MES1923497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017884">
        <property type="entry name" value="SANT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12374:SF20">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTER 2-ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12374">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51293">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SANT" evidence="2">
        <location>
            <begin position="24"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="3">
        <location>
            <begin position="29"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="1">
        <location>
            <begin position="29"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="17047" checksum="5705F2E30FE34FCC" modified="2025-10-08" version="1">MGLSVPPHEASHRYRVIEPIKTPLFEIEWTADEELLLLEGIQLYGFGNWADVAEHVGSKSKYRCETHFSKKYLESKNAPFPETILDENSKILNKREKGEDVRKFLEQIKKFKSVSFPSLKISNPGKPKLLSKSEMHPSMLSVSLYPHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWA5</accession>
    <name>A0ABV2AWA5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006884">
        <property type="protein sequence ID" value="MES1923557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047536789" evidence="1">
        <location>
            <begin position="32"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="155" mass="16984" checksum="756E8F1E2E43B7BF" modified="2025-10-08" version="1">MTLFLCNLSLKHPLTQWCILLLLFSQSLVFAQGVAEPTEVVASESVVASSLRGPSVQTVQDVDRSLSVLSDREIRVKLRQTLIENLAETSVVSTETWSEKVKTGLLNTVKALQDSVIKIGALGDAFRQLHAILLSNIENSSSILIFFLMVISSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE49</accession>
    <name>A0ABV2AE49_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000039</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000005">
        <property type="protein sequence ID" value="MES1918004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11440" checksum="61AF8EBD75501C61" modified="2025-10-08" version="1">MNQFVPSSFRTEARRRYFLRRRRKRHFRKFVVVFKVAVGGNRALDGAQVPLFYFAPQRFAVDVFSLAEQAVYAVPGFVGLLDDFGSEGVLVVPDADGAILAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEE7</accession>
    <name>A0ABV2AEE7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000117</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5047182913" description="Secreted protein" evidence="1">
        <location>
            <begin position="17"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="99" mass="11424" checksum="428F610A14B4E37A" modified="2025-10-08" version="1">MCKLCFLLAFVVLGRCKGPAPPKKIAPQHYHRWLPCYSSEIGYLHLNAKVFVSHCKRLTDPDIYAKISFALEKARVVYEFSFGIKLHFEVIQLCEHVLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEF4</accession>
    <name>A0ABV2AEF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000107</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="22626" checksum="F2065A9BFE2ED9E1" modified="2025-10-08" version="1">MVFSSSRNLYIVLLANTTSCLCYYMATTAFSISVGDAKRVRIYFAMPSALLGWGLLQFVRRFVEKIDYIVWAFPFLAPAFFFLSDSPVSKRGLSETGYDVVVSFLFIARDTNFWMLYVFSNLVIMDSVSLKHPRAGLNGISAALFVFCTNFGDALGLILANVLYDNHQFDYIAHLATGLILSVGSIIIFLHLFRCKRKTSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFA9</accession>
    <name>A0ABV2AFA9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000333</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000047">
        <property type="protein sequence ID" value="MES1918355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7565" checksum="53875CB59BB3AB6E" modified="2025-10-08" version="1">MWKLKTSKDDLGRCVWYFDPNESEALSEEQSRFFDSFDKKINRTYRNQKIHWREKNLPSHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG3</accession>
    <name>A0ABV2AFG3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">UPF3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000369</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RENT3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000056">
        <property type="protein sequence ID" value="MES1918400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039722">
        <property type="entry name" value="Upf3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005120">
        <property type="entry name" value="UPF3_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13112:SF0">
        <property type="entry name" value="FI21285P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13112">
        <property type="entry name" value="UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03467">
        <property type="entry name" value="Smg4_UPF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0866">Nonsense-mediated mRNA decay</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UPF3" evidence="6">
        <location>
            <begin position="3"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="166"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="168"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="190" mass="23101" checksum="52FB9DB20F3C9C39" modified="2025-10-08" version="1">MSKQKIVLRHIPMEVRRDDILRALRPFGYMLESFRFEKPDDATLKFRKLFNLLVYNRCYLFFKNPNDIVEFKNSFNGVSYKTVDGKIRHKKLIVEYAPSQDKIVPEKDRMVDPRNNTIEEDEIFINFLANFNKKENENEKQILNEKKKDSDQSEKAPIIKACENLFKNRQKRNRHSRKNRNRRNRRNRKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFM0</accession>
    <name>A0ABV2AFM0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="18315" checksum="80A24A7B72F7D389" modified="2025-10-08" version="1">MFGTIKLKIEMDHLIFILLSVLFVICCFLILYMISHRQNFLLVNSFGEKFLINLIQNDKILRKECISKFERREVTEYEIRHAMHKAFHLFLEVKNLEEHVKQSNAYTFDKYEKKITEKLPKYTSSCVNFVKKLTRYIIVKNRSRELIKGLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG29</accession>
    <name>A0ABV2AG29_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000560</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000095">
        <property type="protein sequence ID" value="MES1918616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="357" mass="42603" checksum="CD63CD8D90ADFAFB" modified="2025-10-08" version="1">MKLNKSCTNPEVAKFVMFYQNKKETSKPSNKNISKIPEFVTEITEFCCWDFIEKIRNTIIKKPKKNDLDEQADILNKKEEEEKTLKPPTKKTFESIYPDLTQDHEKIDRIHNILITKFNYDEENIPLNFMRMILKAVYLISIEKNLIDLNYWDPKDYYLTVSKCLDGDTNSINKIVEKIKSFVIEASYEEIIKYLDDINKFMEFETYLVQTKHKELHIEQFEKITKEILSDKGENSNSFDKKSQMNISLLVDEFLNWEYKQKILDKVIVNTPKHSKIRLFLTQTVEIYNEESIGKNDADNVRLLKEFYLKLLETISNVKGEKLNLQNKEELIDFFNQDCEDDPIMYEWNNHFYSSNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGC2</accession>
    <name>A0ABV2AGC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000279</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAPP small subunits family. BET3 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000038">
        <property type="protein sequence ID" value="MES1918292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.20">
        <property type="entry name" value="Trafficking protein particle complex subunit 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024096">
        <property type="entry name" value="NO_sig/Golgi_transp_ligand-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007194">
        <property type="entry name" value="TRAPP_component"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04051">
        <property type="entry name" value="TRAPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111126">
        <property type="entry name" value="Ligand-binding domain in the NO signalling and Golgi transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13312" checksum="1352BAB528E90FA0" modified="2025-10-08" version="1">MVLFKNTLAMTSQFLMINEIVAFELEKKKKDKREHFKNLKRIGNDIGFKIAISISDTVSMAKSDLEAAKSLCSILWPALFYKKADGLKSNAQIKSKTSIFDIRSVAFIFIIKSFLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR5</accession>
    <name>A0ABV2AGR5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RWD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000768</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000145">
        <property type="protein sequence ID" value="MES1918873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23823">
        <property type="entry name" value="RWD_GCN2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040213">
        <property type="entry name" value="GIR2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006575">
        <property type="entry name" value="RWD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12292">
        <property type="entry name" value="RWD DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05773">
        <property type="entry name" value="RWD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00591">
        <property type="entry name" value="RWD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50908">
        <property type="entry name" value="RWD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RWD" evidence="1">
        <location>
            <begin position="9"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="25535" checksum="DB3FA6C9DA1AE09A" modified="2025-10-08" version="1">MDFEGEQKQEIEVLKSIYFEEFELTGTSPISFDIKLLPLSVQEEDSHVSLTLKIVFPSKYPEESPFSSIKSSLNIEEENLVKIEKIVNKIKNENKCSVCVFNICEEIKNFLVSINKAPQTDYEKMIERQNLKQNLIKINQNSKLDQNKKIDENAKINENSKIEAESKKLFDSMNFLPGAICDKANFKKWARSFYKKSDVEKMELKITGKRYFLKQKDKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW2</accession>
    <name>A0ABV2AGW2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA-directed RNA polymerase subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000811</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000155">
        <property type="protein sequence ID" value="MES1918921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10507">
        <property type="entry name" value="Zn-ribbon_RPA12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012164">
        <property type="entry name" value="Rpa12/Rpb9/Rpc10/TFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034004">
        <property type="entry name" value="Zn_ribbon_RPA12_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001222">
        <property type="entry name" value="Znf_TFIIS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11239">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11239:SF12">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01096">
        <property type="entry name" value="Zn_ribbon_TFIIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005586">
        <property type="entry name" value="RNApol_RpoM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00440">
        <property type="entry name" value="ZnF_C2C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57783">
        <property type="entry name" value="Zinc beta-ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51133">
        <property type="entry name" value="ZF_TFIIS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIS-type" evidence="6">
        <location>
            <begin position="84"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR005586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="127" mass="14533" checksum="63736AD2469EA666" modified="2025-10-08" version="1">MVDSSKKDNEKLISFETLFCPKCESILSRPDLNNVISCYACNYNCLHSEFFSPEQISDQKEEIFTEEFYDCDDFSGDVVARPTVKFDCPECPSKKASYLALQMRSVDEGQTVFYECVDCGHKTRTDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF0</accession>
    <name>A0ABV2AHF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000197">
        <property type="protein sequence ID" value="MES1919093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="132"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="90"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="155"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="22024" checksum="F4ED0E8397342312" modified="2025-10-08" version="1">MANNQESNIENELQKLLENEYNFQTKQKSETKQTEQTKIEQKEQLMFFEEELKKLRLKNKETEQQAKTEIIKLSNQNNNKSEFETNEYYQMDHEDSSNKENKNDTFGCEFTKDGDILEPEFKKSSFLEFKPQINRVDDIEDDKDKQKKNLGAKRSKNESKDEKKTRKKELKVQRKLKRQNKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM7</accession>
    <name>A0ABV2AHM7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Prenyltransferase alpha-alpha toroid domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001044</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000219">
        <property type="protein sequence ID" value="MES1919181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001330">
        <property type="entry name" value="Prenyltrans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00432">
        <property type="entry name" value="Prenyltrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Prenyltransferase alpha-alpha toroid" evidence="2">
        <location>
            <begin position="37"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11293" checksum="90138E72E74FFFB6" modified="2025-10-08" version="1">MSEKSGSISEEHITIVQQKKIENEVINAISKRNHFFLTKTPHINKILDILQNGISGNMAIIESSKPWFVYWCLHSLDILQSLNFLHNSVKTRSFPPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHW2</accession>
    <name>A0ABV2AHW2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000944</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000192">
        <property type="protein sequence ID" value="MES1919074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="24"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="283"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="321"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="377"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="424"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="450"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="6">
        <location>
            <begin position="1"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="6">
        <location>
            <begin position="284"/>
            <end position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="489" mass="55882" checksum="3BF3D92BEB6DEE40" modified="2025-10-08" version="1">MNLINSIIGTGIVTLPKAVKNSGLIASIFISLLCCITIYYTSHLMIYTADKREKKTGNLIMSYGELCQVTLGTFSYFFLVTITFLMSFLCICVYNILFRTQIKDIISDINSETFVYDKYVLLGVSLVLILPFCLLRDISKLSYVSLVSSVSVVIIVLITIARSPFYHREMVNLDYSEMRINEVKLNTERSLYLCDSANKEPDKYLVGHVKNYSYLLQALLDKNACPKLPKNEQIDEIISNLPELPQCYSVNNCDTWIEAIAHSHSNYLLSIYSLQVTPPESNSALLFLSSLGIYASTFICQQTTFSIFRQMKTQTVRQWKIVQLVSFSLVYILCMSLALSGYFSQQFQAGDTVFDKMKIRFFVQDDQRDIAVNVARILLVLTIAFSFPLQNFFARKNLLLLYYGLLEKIKKRSFKEEANRPSNVIFYSFSLGQFALALIFGLFVNGLIEVYSLIGALFASPMIYILPCLCYMAVNNNILKFLKENFRFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI14</accession>
    <name>A0ABV2AI14_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001176</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000256">
        <property type="protein sequence ID" value="MES1919326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="302"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="19"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="331" mass="38446" checksum="E5A67A468D0E1CCE" modified="2025-10-08" version="1">MVDLYKNQIYKKSDIIQDRKSETVEKPNEKTDFDFDNFGEDENEENENLFEYDQIPQNSPKLFISDENVEMQISKEKVEKALESVRKSLFGLSKFSDKFPSLDKTKNLQKRFAKILNSLNDEKTIKSDLISPIKNGSDIKNFELKTDNGQNVKAFLREVFDIEDEIDIKNDHFVKNDKTDFDKELEKSEVEYNGENVKKKEKVSEIDVNKIFGPPKEKTSVIKKRSFKDDFVEKKRSEISEDLNDMAVTLKDTAVNFGQTILGDLTKLESIDNMFSENKDKVGNMTKELQKEQRIGGYAESIFSYAILVIVFVLTYFVIKTFPTEKKLNFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI36</accession>
    <name>A0ABV2AI36_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Rad60/SUMO-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001131</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000243">
        <property type="protein sequence ID" value="MES1919272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17039">
        <property type="entry name" value="Ubl_ubiquitin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="12762" checksum="7281FAE794674C06" modified="2025-10-08" version="1">MRSQDEAFALAANQDAERERGFESVSQERDKEDGIEVRVRFPDGSTFNFVAYSAQKVAFIYSKVADEIKKKNLPFKKFKLIDSNGMKQLDDKNALISVSFKTRNVFMLVKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AI70</accession>
    <name>A0ABV2AI70_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001057</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000222">
        <property type="protein sequence ID" value="MES1919194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18605" checksum="784E1096F8202504" modified="2025-10-08" version="1">MITQKQTVSLLNAENLSLVAELPHSLELVAKDILMGAIFIGNNVLSWSKNKMFLWKLDSLKIVQKFISDATIIDISKIPECKKNAFAVLLNFKTAKIHFYLIESEKRLSKIFEKQFSQKASEFNNNKLIIKRSEENICDFLFLSNSVTLIKTCVDIEEKFDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIN4</accession>
    <name>A0ABV2AIN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001352</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000321">
        <property type="protein sequence ID" value="MES1919540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="120"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="169"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21809" checksum="84768B06DEC0F979" modified="2025-10-08" version="1">MAFQQPNRRFSGKNEFYFQKTNTNSSFQQNAKNRALPNIIYRQNENSKYRPPIPVFRMPPIIYRRVFINRPTRRPISVRPPIRPPIRRFDLPIQPQIRNAPQKISQLPSRNFVIRTTESNLRAQKADHKNIKSPPNSKHKLNKTNKPTVKSILNREETLKVRKTQTQKPNDDKQKSVFADKKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIR4</accession>
    <name>A0ABV2AIR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Small nuclear ribonucleoprotein 35kDa (U11 U12)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SNRNP35</name>
        <name evidence="4" type="ORF">MHBO_001379</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000329">
        <property type="protein sequence ID" value="MES1919570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045164">
        <property type="entry name" value="RBM41/RNPC3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16105">
        <property type="entry name" value="RNA-BINDING REGION-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16105:SF0">
        <property type="entry name" value="RNA-BINDING REGION-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="15"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="263"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="353" mass="41333" checksum="491E9FD526D9301C" modified="2025-10-08" version="1">MFNDSGFYENKLIKTVLVVRPIPPSCNEILLNALFRKFKAVNVQKLNPKSRMRSKVFVTFKNALDAETAKMHFNGLFIFNRKLTAFFYKKRIKLCSDISVEDYLRSECKDDSVKLKPPPLTDEILLRIQNVLKANRVIYKKVAKLFFEHKISFVPPRAPPPLLPPLTENQLDQMREKIDRDMSSDESEMGDGDAIDDKQKSKKIKIRKLGVRKSNIRKRKLSELVENFDYISEKEIWEDKKLYKIFLKQKDYGIEDELSLATKTLYVSNVSETTTEKHLQKIIEKLFSKKALVKIDIFKEGFLKGVAFIAFAEKHFAMLARRFLNRMVLNGQAIFVVYLRTFRTLRKPNSFKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIW0</accession>
    <name>A0ABV2AIW0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001392</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000332">
        <property type="protein sequence ID" value="MES1919588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052234">
        <property type="entry name" value="U5_snRNP_Component"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44006">
        <property type="entry name" value="U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44006:SF1">
        <property type="entry name" value="U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="28"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="71"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15105" checksum="0E5BB1DFAA69C107" modified="2025-10-08" version="1" fragment="single">MELELYNQSENENRTKSSTSLGVESVVLAGHKGAVYSGKFHPDGNLIATGGHDSLIFIWDVNNKCKNVGLLKAHKNAVLQVDWSRNGDYLFSCSADNFASVFDSKTFRKIRKVKGHKSFLFQILRIINSISPCRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ10</accession>
    <name>A0ABV2AJ10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TATA-binding protein (TBP)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tbp1</name>
        <name evidence="4" type="ORF">MHBO_001464</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000362">
        <property type="protein sequence ID" value="MES1919675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.10">
        <property type="entry name" value="TATA-Binding Protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000814">
        <property type="entry name" value="TBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012295">
        <property type="entry name" value="TBP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10126">
        <property type="entry name" value="TATA-BOX BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00352">
        <property type="entry name" value="TBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00686">
        <property type="entry name" value="TIFACTORIID"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55945">
        <property type="entry name" value="TATA-box binding protein-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="199" mass="22582" checksum="76E2652DCDE546A5" modified="2025-10-08" version="1">MSKKLGAQSTKLVLGIDPRNLYFRNIIATVNVGCYLDTLDISHRLKDAKYNPTRKYAIFRSPDFKTTATAYKRGTIVLNGIKSPQKGEVAAKSIVKFLRNLGYNTNWDRNLQLRCYLCSYDLGSRLLIDENTFADQNPHLVMQKGAEKVRAMVIRSIMPKVSLMIYLSGKILIWGKSPEVITKAINMHLGPLIEMREDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ24</accession>
    <name>A0ABV2AJ24_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Malate dehydrogenase, cytoplasmic</fullName>
            <ecNumber evidence="7">1.1.1.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MDH1_2</name>
        <name evidence="7" type="ORF">MHBO_001470</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LDH/MDH superfamily. MDH type 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.37" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010000365">
        <property type="protein sequence ID" value="MES1919681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030060">
        <property type="term" value="F:L-malate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="entry name" value="Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010945">
        <property type="entry name" value="Malate_DH_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003916">
        <property type="entry name" value="PRK05442.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23382">
        <property type="entry name" value="MALATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="LDH C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 3 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactate/malate dehydrogenase N-terminal" evidence="5">
        <location>
            <begin position="11"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Lactate/malate dehydrogenase C-terminal" evidence="6">
        <location>
            <begin position="160"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="297"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1919681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="327" mass="36403" checksum="588820FB01BEEAB5" modified="2025-10-08" version="1">MLNAKRDFCLTISGAAGQIAYSLIPYVTEGQMFGKDKSINLVLFDIPQMADRLESLRMEIQDMCCPNITTLKIATSYKDAFMDADGVILLGGYPRKKGMLRKDLISLNAPIFKETGEAISKYSSPNAKILVVANPANTNALVLLKSSKLPPKNITALSFLDSNRLKGLIANKFNCENTSVSGINIWGNHSTTLTIDCDDLVIYGKKVDEATLLEKLQMTKNELSETIRQRGARVIEKRGLSSAMSAAKAINDHMRKWFSPGKNCFCMAVYSDGNPFQIADGIFYSFPVVADNGEWLFDDKIKSNERIKRELKESEKELIDEKNKCDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA4</accession>
    <name>A0ABV2AJA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001539</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000392">
        <property type="protein sequence ID" value="MES1919765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16719" checksum="BCF3289CB242B0D1" modified="2025-10-08" version="1">MEEAVDEKLIMIFATATDDYHYALINRRKYLACAFQRTPYLTKTILAALGNSFGAERITERDKNYMMSDVDSYKPIFISEGTRNLINDVLNDIRNGKKIALFIQFLRETKDIVIKSKYFIPFVTSATIVVVYTILAIIVQFVRSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJA6</accession>
    <name>A0ABV2AJA6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001526</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000388">
        <property type="protein sequence ID" value="MES1919751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045573955" evidence="1">
        <location>
            <begin position="18"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="32874" checksum="0C26E93F59FC4766" modified="2025-10-08" version="1">MVFTLFYVLLFSKQVANNPCPADGKFFMTESRYFSSNISEQVPEVCFEELQNFDFRGLAINDASNPYSLCQTQMNTVDCELVDQKWFIQGCKLSHPNVFYKDGNVLNKCPKCDNNQDYTSGSAFTSGFFKITLACLIPFIKEAYDLNADCVANKDKNYVCDQCKIFNINNYNFVRGNLLQNSLETDCQGTTLNGVDGWKSMFGCPYPPNSNQKEFDFTQPCVKVLNGLRFKGICKTVKTQKMLVKFLHSLTYVDTLTCTKTYDNTEYARVECFLLTFSPVSTGMSIEPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJB1</accession>
    <name>A0ABV2AJB1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001356</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000321">
        <property type="protein sequence ID" value="MES1919544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045374883" evidence="1">
        <location>
            <begin position="17"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="11845" checksum="9795CD58460F1707" modified="2025-10-08" version="1">MSAFVVTAILFSSVYALINNCPLHLPNKSTSRMTTYQFNPANITLQTFVLKTKLAPNAYNRVYYRCKEEFTPSKGIIDNGQDGYSMCIGGNYVPYPFCHKKREM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJC3</accession>
    <name>A0ABV2AJC3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Integral membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001554</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000399">
        <property type="protein sequence ID" value="MES1919786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="156" mass="18128" checksum="923663D846410BC4" modified="2025-10-08" version="1" fragment="single">MNQILIIASILHGLSFLVAFLMLIFRGNRFPFDKRSKFIALIGMGSCTANGLVIILLNYPNVTPTVTAYVNYILRSVILILINVIYAYRITHVLLDHARQRSIIHNTKFNKMHSHIFVNIRLYFLLFYMILITYPLCRGIDNSRVHQRLDDFKISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJH2</accession>
    <name>A0ABV2AJH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Electron transfer flavoprotein alpha-subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ETF1</name>
        <name evidence="4" type="ORF">MHBO_001592</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic release factor 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000415">
        <property type="protein sequence ID" value="MES1919833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.960.10">
        <property type="entry name" value="eRF1 domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.60">
        <property type="entry name" value="eRF1 domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042226">
        <property type="entry name" value="eFR1_2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024049">
        <property type="entry name" value="eRF1_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005141">
        <property type="entry name" value="eRF1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005140">
        <property type="entry name" value="eRF1_Pelota-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004403">
        <property type="entry name" value="Peptide_chain-rel_eRF1/aRF1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03676">
        <property type="entry name" value="aRF1_eRF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10113">
        <property type="entry name" value="PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03463">
        <property type="entry name" value="eRF1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03464">
        <property type="entry name" value="eRF1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01194">
        <property type="entry name" value="eRF1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55481">
        <property type="entry name" value="N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53137">
        <property type="entry name" value="Translational machinery components"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eRF1/Pelota-like N-terminal" evidence="3">
        <location>
            <begin position="8"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="220" mass="24860" checksum="637B78E3E5AA4F4F" modified="2025-10-08" version="1" fragment="single">MVKNFDSERLVEQWKVKKMIKDLTNAKGNGTSMISLIIPPKDQIPRVSKLLSDEYGTASNIKSRVNRLSVLSAITSAIQILKNYSKVPPNGLILYCGTILNEDDKEKKFNLDFEPFKPINTSLYLCDNKFHTEALHQLLEEENTFGFIIMDGNGCLYGTLCGSTQTVIHKFSVDLPKKHGRGGQSAVRFSRLRMERRQNYVKKVAETANSLFINNDNPTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ7</accession>
    <name>A0ABV2AJJ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001616</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000426">
        <property type="protein sequence ID" value="MES1919861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="21516" checksum="9ECE7BBF894C5F87" modified="2025-10-08" version="1">MPTISKLGGSKYYVSLYIAMLSLYAIGQAAVLFLTIIYLNTSGIVASVFTTYGFVWFMSVLLVSLKCPKQGVTKKISEGLKENDSHRMLVINMIRLNFWIIVSLGFVKFSHPYALGSILAFFWILSVLSLFGNIFDHRHYLKKSENIDTNNKKIEQGIAILVDIIKIRVALLTIPLRSLHVCYQVVMGIGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJK3</accession>
    <name>A0ABV2AJK3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001577</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000407">
        <property type="protein sequence ID" value="MES1919812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.940.10">
        <property type="entry name" value="Functional domain of the splicing factor Prp18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16281" checksum="B7C5CB901517602A" modified="2025-10-08" version="1">MKKSKNQKSDFVENKENYIEAKNIEEDYEDLESLRPEQRAVMDILTAILTNIESKNLVGMEKRKAKEIHEKLKILCKRMAEGKLSDSAFGNLAVLTKDILNFKICLIFIIKNIIFLKLLMSGLKNPIKQFLVIQKLSLLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJN6</accession>
    <name>A0ABV2AJN6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gelsolin y domain</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">VLN4</name>
        <name evidence="3" type="ORF">MHBO_001389</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000332">
        <property type="protein sequence ID" value="MES1919583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.950.10">
        <property type="entry name" value="Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051618">
        <property type="entry name" value="Actin-binding_LIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003128">
        <property type="entry name" value="Villin_headpiece"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036886">
        <property type="entry name" value="Villin_headpiece_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24213">
        <property type="entry name" value="ACTIN-BINDING LIM PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24213:SF9">
        <property type="entry name" value="UNCOORDINATED 115A, ISOFORM B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02209">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00153">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47050">
        <property type="entry name" value="VHP, Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51089">
        <property type="entry name" value="HP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HP" evidence="2">
        <location>
            <begin position="55"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="14640" checksum="B5D42943DB79A490" modified="2025-10-08" version="1">MQNKSSKNEEKTDKNEEQSEKMNEEKSEKMNEYLKIEKCSKKEIKSIEEIEKEIEKADRIYSYEKLSKTADEVPPFIDYSKRESYLSDEEFEQIFKMQKAEFYKLTLWKQKILKKNVRLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT0</accession>
    <name>A0ABV2AJT0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001639</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000434">
        <property type="protein sequence ID" value="MES1919887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="79" mass="9119" checksum="D83D70F6D8A87075" modified="2025-10-08" version="1">MSQKYLNFEQIRNLEQSKQEPQRESASVDFLRRGAILTGGKFIPPSRAEDIKPFYDNVKRKLIPARKASVREIQANASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT4</accession>
    <name>A0ABV2AJT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001661</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000443">
        <property type="protein sequence ID" value="MES1919918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="384" mass="45129" checksum="83950119F7866878" modified="2025-10-08" version="1">MSTFLKSINRPIPNFTYKNFIKICQNLRKIDNFYQKLHNFRKFCTKLSENDEIYHVANILVDEKSIKFIIFRSKFKSNLAETYLVIDGYYDFFYLIENSSKKMLLEFRISLDGYWGELIWIGKGIYFSGSLVLEIFKSIKSSLGIFLFYLFDDSKIELSAPVTVNSNRKNRKSMALRVLKLVCEQIPLTWYQRYLGVYPSICKNWKKLSGKTISQNPTRYNEAVKTIRGTNILSFCKITHPYTLETIQKLCEKYICGDLSVRRKTKTIVKSEQDESKRSLKLIIKNPLKRRTHATVHELGSKIMTKYKNTANKTGKNALLDLIEFYDCFLNLETVELKSDRGKYINCLRYLHNVQIFQSVSYDKSKNFKGFILIVKIHLKRCLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJU1</accession>
    <name>A0ABV2AJU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001688</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000453">
        <property type="protein sequence ID" value="MES1919946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046868532" evidence="2">
        <location>
            <begin position="23"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="211"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="272" mass="32104" checksum="F9C947C561F50418" modified="2025-10-08" version="1">MAFKYLYLLIMVVCSEDSFTYPEPDINVCSAAGTYSYDKKTNRHSCRFRLYGIDHTDVKKVCSKPPGYHQNLIMGFNLNKNSYIYCPVTKNTGWKLKKPYFCYLLPHYQPRKGIEMKMDCDITDFNEIGYSWPGFSKHWPNELKGKRNTCDAHCNHLSDPKYDLYRGCTCNTKLNETNCADFEEKCKYYLENKISVSMFHFMKFSSENKSIALKIFLAILVCFLVCFCVSTVCCNIELPEENFYAIDDFMREKVCFCCRKCFFNYRENRKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJV1</accession>
    <name>A0ABV2AJV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Beta transducin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">DIP2_1</name>
        <name evidence="1" type="ORF">MHBO_001694</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000458">
        <property type="protein sequence ID" value="MES1919952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="13906" checksum="7D46CAC9CC16F7E8" modified="2025-10-08" version="1">MAETPEKINFDCVRTIKLENLTVGVVLTTEFEDSDLAVIGLKPNLIKLIDLNGDKELQGIKVENGDKLTAMSNLGKYCRIATGYSNGEVKFWRLRNDFNQNAKLEFEKSFDLEDQINCLQFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJV2</accession>
    <name>A0ABV2AJV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005299</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000450">
        <property type="protein sequence ID" value="MES1919940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045885996" evidence="2">
        <location>
            <begin position="29"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14309" checksum="9C4B3563D4D5954B" modified="2025-10-08" version="1">MSCKIFNFLFFSILLFSKFSFKTIPVNSNCIPGKQNNSSNIDNRRYSKTLNCIYRESKYPFRKKWKIFHCVDSFGLIEYEGVQYLCGLSIENSLIYVTFTISFLLFVVGLPMIVCIRYPCFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJX1</accession>
    <name>A0ABV2AJX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001362</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000324">
        <property type="protein sequence ID" value="MES1919552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="GroEL-intermediate domain like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00750">
        <property type="entry name" value="TCP1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00751">
        <property type="entry name" value="TCP1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="24767" checksum="71CE3F755982D9A5" modified="2025-10-08" version="1">MSLQMVNPNANSISVDALEINVRAAISLKELLKTNLGPKGKLKMLVSGAGDLTLTKDGAVLLKQMQIEHPTACVIARNAAAQDQISGDGSTSLVLFIGELLQKSAQLVADGVHPRNISDGIELGRKDALRFLEHFAKDVSEDLVKDREFICAVASSSLRTKLPRAEADHLTGIVVDSVMSIRREGRETDLFMVEVVTMEHKSVLDSVLVDGLVLDHGFRHPRFYIKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJZ9</accession>
    <name>A0ABV2AJZ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP synthase mitochondrial F1 complex assembly factor 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001487</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000371">
        <property type="protein sequence ID" value="MES1919703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010591">
        <property type="entry name" value="ATP11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13126:SF0">
        <property type="entry name" value="ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13126">
        <property type="entry name" value="CHAPERONE ATP11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06644">
        <property type="entry name" value="ATP11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="206" mass="24384" checksum="C1AB38BF1ED04822" modified="2025-10-08" version="1">MAILNILKSKVNFKTNILFCTKSAKFSNRQLNDIVDLRKLESEDTKTIEYIWEKHHSNSPSKCSSTLNIEQFEKIMKRSKIGKRFVFPVPTGKKFFVVYSEFQDNFCIMTSLEAFRLQKGDSYPYFILSFYDELIDSRDISLVRGQVLNEHMNIEQGKYLMEQTIGHYLDDKKFERVRIFNTEPKKFDLAKYFKSLGFDYRNLVGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK05</accession>
    <name>A0ABV2AK05_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphofructokinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001563</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000404">
        <property type="protein sequence ID" value="MES1919799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035966">
        <property type="entry name" value="PKF_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53784">
        <property type="entry name" value="Phosphofructokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="126" mass="13869" checksum="E12F71A0CA74A4BC" modified="2025-10-08" version="1">MRSQNPNNEPRTQKVAILTSGGLAPCLSSAVGYLIEFYTQKSPETQIICYLNGYRGLLLGDSIKVTEKIRKQAPKLQHLGGSPIGNSRIRLKNAIDCVKKGLVRNGESPEKIAAEQLIKDEITVYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK90</accession>
    <name>A0ABV2AK90_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein fam13a</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">FAM13A</name>
        <name evidence="3" type="ORF">MHBO_001809</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000509">
        <property type="protein sequence ID" value="MES1920090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00159">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45808">
        <property type="entry name" value="RHO GTPASE-ACTIVATING PROTEIN 68F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45808:SF2">
        <property type="entry name" value="RHO GTPASE-ACTIVATING PROTEIN 68F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00324">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="2">
        <location>
            <begin position="136"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="332" mass="38605" checksum="A93C91140B4522E7" modified="2025-10-08" version="1">MRGKNDDSTTSECMRAYSIATESFNSYYKNYSDNFLPKAHKMYTAIENERKKLIEEALFKFPELFKAFNRNNENALQKQIVEKEESEESPTKTEKQSNKKDASTNDPFLYKLTEVLIDKDWHILQLKKKHNDIFDTTIECLLKFDQNKGKTVPIELTTVCEFVREHGKETEGIFRISALSKTTSRVKQLIKTKKYDLPEETDVHACACFIKQFLQQLPESVVNIRAAKKCYAIGEKHLNGANVDDCIKDFEQILKDIYPENIPTLEYVSKFLNEISLSKEKNRMNHENLGIIFAPTLLAMSEKTMEDISTKIRRGKFFMIFVIACANKIEWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB9</accession>
    <name>A0ABV2AKB9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001584</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000411">
        <property type="protein sequence ID" value="MES1919823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050930">
        <property type="entry name" value="MFS_Vesicular_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23506">
        <property type="entry name" value="GH10249P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23506:SF26">
        <property type="entry name" value="MFS-TYPE TRANSPORTER SLC18B1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="92"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="115"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="145"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="178"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="7">
        <location>
            <begin position="23"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="214" mass="23512" checksum="EC80C47BCFDCDC22" modified="2025-10-08" version="1">MANNKFRSGCAKLKELYKNHFLLVFTLCLIKLAPALLLSLVNPYVSAQLENIESNSLLVGLALSMNTISVFMTCMFFGYYSEWSYFGRNATITFGIVTTAGSSMLIGIAESYAVFFIILSVSGVGAAATMCCAYSIILDAIPGHLLVLALAHMEFFEAVGWTVGPLLFGTILTSKKKVFYPFLAVGLVQLTIAIYSCVVMFFQLKPVRKKAREF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH9</accession>
    <name>A0ABV2AKH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pre-mRNA-processing factor 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PRPF6_1</name>
        <name evidence="2" type="ORF">MHBO_001887</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000543">
        <property type="protein sequence ID" value="MES1920190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045075">
        <property type="entry name" value="Syf1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246:SF1">
        <property type="entry name" value="PRE-MRNA-PROCESSING FACTOR 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23240">
        <property type="entry name" value="HAT_PRP39_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23770" checksum="4F1A6B5BEEAE1FC8" modified="2025-10-08" version="1" fragment="single">LKNCPKSPIIWQKYAEFEEQHSTASKARSILETAKLKIPKSPDLWLASVRFEFRQNSTNKNGGTDRSLSMALQQCPDSGKLWAFSVDFETKAKRRGRCYDALKALPEDCYVYLSAAKLFWSERKLEKAKNWFERAVKTKDFGDAWIYYYSFSLQHGTEEEQQNLLERCSEAEPKHGEKWTSVSKKPGNMKKSTADILKEAALKIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKI5</accession>
    <name>A0ABV2AKI5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Ribosomal protein L11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001879</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000540">
        <property type="protein sequence ID" value="MES1920181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00349">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.250">
        <property type="entry name" value="Ribosomal protein L11, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1550.10">
        <property type="entry name" value="Ribosomal protein L11/L12, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00736">
        <property type="entry name" value="Ribosomal_uL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000911">
        <property type="entry name" value="Ribosomal_uL11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020783">
        <property type="entry name" value="Ribosomal_uL11_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036769">
        <property type="entry name" value="Ribosomal_uL11_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020784">
        <property type="entry name" value="Ribosomal_uL11_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036796">
        <property type="entry name" value="Ribosomal_uL11_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11661">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11661:SF1">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL11M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00298">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03946">
        <property type="entry name" value="Ribosomal_L11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00649">
        <property type="entry name" value="RL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54747">
        <property type="entry name" value="Ribosomal L11/L12e N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46906">
        <property type="entry name" value="Ribosomal protein L11, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL11 N-terminal" evidence="6">
        <location>
            <begin position="25"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="Large ribosomal subunit protein uL11 C-terminal" evidence="5">
        <location>
            <begin position="88"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="159" mass="17952" checksum="3B6C60225424DCC7" modified="2025-10-08" version="1">MATFKIPKMSFARKAGERTLKTKLRLRCSAAIQRPGPKLGKSLGNYGINMMQFCKKYNELTKNLKDGVETPVLLYVYKNKTFEMEIRYPSASWFLMKAANIEKGSEFPLREKVGRVSLRQIYEIARIKQCDPGKDIAPLKGICKSLIGSARSLGIDVVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKL3</accession>
    <name>A0ABV2AKL3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_001914</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000555">
        <property type="protein sequence ID" value="MES1920223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22974:SF21">
        <property type="entry name" value="DUAL SPECIFICITY PROTEIN KINASE TTK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22974">
        <property type="entry name" value="MIXED LINEAGE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10523" checksum="C80C5F76D86B3073" modified="2025-10-08" version="1">MAPECFETRDGKVAISRGADVWSLGIILFEMLVGHTPFSDLKGFAKCNAIVSEAAMPLHLIKDPLVLDLVKMFLQYSKKGVCVDRLKNAPPRSKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL10</accession>
    <name>A0ABV2AL10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002058</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000639">
        <property type="protein sequence ID" value="MES1920381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15489">
        <property type="entry name" value="PHD_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034732">
        <property type="entry name" value="EPHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050701">
        <property type="entry name" value="Histone_Mod_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793">
        <property type="entry name" value="PHD FINGER PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793:SF148">
        <property type="entry name" value="RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13831">
        <property type="entry name" value="PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13832">
        <property type="entry name" value="zf-HC5HC2H_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51805">
        <property type="entry name" value="EPHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="6">
        <location>
            <begin position="59"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21262" checksum="870A3E5EA3568FA2" modified="2025-10-08" version="1">MSEICEICDKSDNTVKCVHCGVSVHRDCYGYPLVKLSKTKKWTCLVCGFPKDFKTKNEQFKCALCPNRKGAMKKATDWRWVHLRCALWIPEAFFYSTEGREPIDLLRIPPKRFSEKCSYCKKGGDGACLSCSTQNCKMKFHVPCGINKNVFLTYRSNKKSQIDEIFSYCHLHSEYWRNKASNAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL28</accession>
    <name>A0ABV2AL28_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002051</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000636">
        <property type="protein sequence ID" value="MES1920374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8333" checksum="0384E62CEE188420" modified="2025-10-08" version="1">MGYLDRQRSRAEENTSDPRIEAENQKQQDQSNSASRLAVCLLPLWKKIQDRKSIESPFEEQPFPNFYCNSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL42</accession>
    <name>A0ABV2AL42_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002060</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000640">
        <property type="protein sequence ID" value="MES1920383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167">
        <property type="entry name" value="OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167:SF24">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE CHK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="3">
        <location>
            <begin position="86"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="3">
        <location>
            <begin position="445"/>
            <end position="693"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="17"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="283"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="34"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="693" mass="80043" checksum="289AE0EF33AA5DAC" modified="2025-10-08" version="1">MPPLKSIYNLNKSIYDFDSSDQESEPEGSKISDLEFESEDETDKDSIKVRKLPDYSETTFPAGTQFHLYDQSVAFCSWYNPDVESAEKMYFCGKDNLGECCRIRENCEGNMKDYEICEEIFTDGKGIHEYKVTDRRSGELYTLKAFTKSENMVKCLTEIWTLEKLSEIDHPVEYYHLFETGKCIYLLKEWFACNFTELLKGNDFINIDSVMHIGMGSILALEPIHKLGIVINNINPSNVRLTFRGKIKYTDFTEATSQGGDINRDFKAVALNLFYLVNSKYTINDAETSKENQERMLKEIQRDYEGISEVGVYSFMLWLARYEIDYKYLRNNTFILDKEADFVKRGPRLLMELVNKAKGNQRIVDLARAKPIEKVFKLENMKCMFDMESTESGIYFSLMGRLLESLENPTFACDKKLKVFKEKCGIYCKKRCSPRCVVTLKQIKIELEQIVAVGRHSVVFPATFNNRKYVVKVCVKKERNIDRIRNEVNILCKVNHENVLGLLHIFETNLFVIMLEEKCDHKLSDLRYEELGKEKLEIFCIQIWNAFLYLNSIGITHTNFNFENTLLAGTTVKLSGFSLSVDQGVQNPPIKNKGTFPFVAPEVLVGFCAPSTPFYSLGLAVLHFVTGETIENVDELLEKNVTKDMPELAWGVFIDGVGALRPEFRTFELRNVLHKLLPFKNRLTIKKKRVLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALA7</accession>
    <name>A0ABV2ALA7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001796</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000503">
        <property type="protein sequence ID" value="MES1920077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1250.10">
        <property type="entry name" value="Ribosome maturation protein SBDS, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.900">
        <property type="entry name" value="SBDS protein C-terminal domain, subdomain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036786">
        <property type="entry name" value="Ribosome_mat_SBDS_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039100">
        <property type="entry name" value="Sdo1/SBDS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018978">
        <property type="entry name" value="SDO1/SBDS_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037188">
        <property type="entry name" value="Sdo1/SBDS_central_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019783">
        <property type="entry name" value="SDO1/SBDS_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10927">
        <property type="entry name" value="RIBOSOME MATURATION PROTEIN SBDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10927:SF4">
        <property type="entry name" value="RIBOSOME MATURATION PROTEIN SDO1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09377">
        <property type="entry name" value="SBDS_domain_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01172">
        <property type="entry name" value="SBDS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89895">
        <property type="entry name" value="FYSH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109728">
        <property type="entry name" value="Hypothetical protein AF0491, middle domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ribosome maturation protein SDO1/SBDS N-terminal" evidence="1">
        <location>
            <begin position="7"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosome maturation protein SDO1/SBDS central" evidence="2">
        <location>
            <begin position="100"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="27967" checksum="230AD91A8621FFB4" modified="2025-10-08" version="1">MPKPKISLVRFKKDGFHFEVPTVPGTVKKYREDRISVTDVIAAENVYTNYNKATRARNQDLESVFGTKNEMDCIKHILKFGIYQETAQEKREETEKNFRNLINLINVNYVDPTSNLPHPPERIRASLQDVKFRFDVSKSSGSQVEKAVAKLRGALTLKKRSTEATLTSFKINSSQHGLSRGMFEHHPFESESFEREVWKCSSRVQVGSFAVRDGQFFIGAKQSDERRLQMDNGVRTYQGRQKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALG8</accession>
    <name>A0ABV2ALG8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Potassium-transporting ATPase alpha chain 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ATP4A</name>
        <name evidence="4" type="ORF">MHBO_002194</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000722">
        <property type="protein sequence ID" value="MES1920531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050510">
        <property type="entry name" value="Cation_transp_ATPase_P-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43294:SF21">
        <property type="entry name" value="CATION TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43294">
        <property type="entry name" value="SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="27"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="87" mass="9307" checksum="555FB5F7004EA2BD" modified="2025-10-08" version="1" fragment="single">ISVIAFILGFGIGIANGFQTKDTVRTLVLIIGLIVANVPEGLLITVTISLTLAAHRMSKKSVLIKNLECVETLGSFKNCSKTSNRSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX3</accession>
    <name>A0ABV2ALX3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 4L</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002312</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000793">
        <property type="protein sequence ID" value="MES1920661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="139" mass="16141" checksum="6E9AF667DE06AD12" modified="2025-10-08" version="1">MPDIPKLIYGINILVHVIKVGIEMIFLFYINKLGYDFQEKVSNMSIFMMSVCLLIFIDAALFVLALFFIWFKKILIFGYISISIIILMSVEIMLVVEIGLNSEIEFNLFYLCASCIFIDCVSIFILMATLKENKNKIYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM48</accession>
    <name>A0ABV2AM48_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000847">
        <property type="protein sequence ID" value="MES1920756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11118" checksum="0A7F25FAC1E41A1F" modified="2025-10-08" version="1">MRKSKNNRKLKLHRNLFHFVKTKDCKVHMKKETWKNIHLGCTLDSDERVPGFCDITAAKDYVLYDLASSKVIGKNTTFFCGLEMSGKEVYQTIFGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AME3</accession>
    <name>A0ABV2AME3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Immunoglobulin I-set domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002444</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000878">
        <property type="protein sequence ID" value="MES1920810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036179">
        <property type="entry name" value="Ig-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013098">
        <property type="entry name" value="Ig_I-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07679">
        <property type="entry name" value="I-set"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48726">
        <property type="entry name" value="Immunoglobulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Immunoglobulin I-set" evidence="1">
        <location>
            <begin position="10"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11459" checksum="85A21BECA99EC4A0" modified="2025-10-08" version="1">MEMNKGIRQVAFRGEIKSKSSLKPVIWLKNGEVLNISDGQKISSRHLLDKATLHISYINKSDEGEYQLVAENTGGEGKSNPIMLQIERGILHCSSLHSISLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMF6</accession>
    <name>A0ABV2AMF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002478</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000909">
        <property type="protein sequence ID" value="MES1920854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="493" mass="57998" checksum="D1CD31025FE881F0" modified="2025-10-08" version="1" fragment="single">LCLSNPLLCDLHIKNLKIVLGGTNFKSVEEMPFNMKSGEFSKKVLIVKPLQNKNFDVDKISFEMFGLKGYHSISDQKPTKIKLKQSFQFKTDQIENVKNFFGYKKEINVNLKKNESQYFDKMIISEKNLKDDNRISNKNEYLKVVEKIPMKIPKITSIPNIQFEYKNHFFHINESKMASLLKGIKATLRIVLENVAEKDIGYLKVQLFPSEKTKFLFYKIYFCFIEKLQRKFSMIAEKVLIIKNGDQKITNADIDFPVSLKTMFYKIFYSKTNGDRYGKTLNGGLSVPILTLPELKSVFCLNQNGPNFNIVIDVYNNNKKSFYFEYGEQKLKIEKLSRKKYCFSIAKRFKTELNFKIKDLFPQIFKSRFLLSVDDKIDFEQAKLNITEKIITKLTNKIEKFAFKKTLDIKILKLKFNQSSKYLEFAISNPSSVTLFNVYLEFYNDSLDFPKWSEIEQIESKKTKKLKFRKAFFVSTDKKIYSNAIFRNEHDEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMR5</accession>
    <name>A0ABV2AMR5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002254</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000757">
        <property type="protein sequence ID" value="MES1920602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="63" mass="6745" checksum="B49F4EAF1ED6013B" modified="2025-10-08" version="1">MQSPSRGTPTHSPASIPANLSSRQSSLVGLATQIASWKHCPLHENSPHSHSYVTMVPSVARLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV0</accession>
    <name>A0ABV2AMV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GYF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002602</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001009">
        <property type="protein sequence ID" value="MES1920998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025640">
        <property type="entry name" value="GYF_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14237">
        <property type="entry name" value="GYF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GYF" evidence="1">
        <location>
            <begin position="15"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="123" mass="14882" checksum="5A20535C7FD24EB9" modified="2025-10-08" version="1">MAESEKKEKGENGEWFYNDEYRNQKGPVTPEKMGEFYKEGIVQNLTLCWKTGMSEWVQLRKIEELKPFIETFDDDIKDLEKLTNSTIGEKQDIRKKRKRKKKKKWKALKFLRLFVKKTNFLQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMZ5</accession>
    <name>A0ABV2AMZ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA-dependent RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002638</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RdRP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.48" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001044">
        <property type="protein sequence ID" value="MES1921040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007855">
        <property type="entry name" value="RDRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057596">
        <property type="entry name" value="RDRP_core"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079">
        <property type="entry name" value="RNA-DEPENDENT RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079:SF55">
        <property type="entry name" value="RNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05183">
        <property type="entry name" value="RdRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RDRP core" evidence="2">
        <location>
            <begin position="2"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="316" mass="36561" checksum="91BE6C3D278D7964" modified="2025-10-08" version="1">MRILTCVDPGDEYAHLIDVLVFPTDSQSARPHSDEMSGGDLDGDLYWCCWDPSLMPSRTVDAFDYSGPKAPIPRKSLSSETRERIDFFSQHDTDLLGTIDSLYFEFADRFKANCPECQELNHIFSNVVDYQPKYAKKTINQLRAKLRTIQERPRNFIWRRIEEENKKLRKEMSPNFGIVRIGHGDFMNNYGEKRNIEIFAADHDEPIFINNEEKYVGKFKHGDIVRFESKWSSFTNRYIASNVHLQNGMNINHLIKIMNVGICTGKIIQIFPSRDRDGDHSIERALGEISYKAYYLKQILSDSNESVPVSIVEFIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AND3</accession>
    <name>A0ABV2AND3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000932">
        <property type="protein sequence ID" value="MES1920888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="17001" checksum="4DEA523D69C836E3" modified="2025-10-08" version="1">MNGFNEPLNISIRSNERVIVVSGAKPNDLIEFKANNLHFDKKTIDGIVYFYYFPEDGIYSVDILCNKTVIKNYRLIPARLREEFVDHRNNKINEKEENIWSFRIPFSNKKLNINFDNLRSSHLSEELHGHKTEETTDTQPLLSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANR2</accession>
    <name>A0ABV2ANR2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Translation termination factor GTPase eRF3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">SUP35_1</name>
        <name evidence="4" type="ORF">MHBO_002847</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001228">
        <property type="protein sequence ID" value="MES1921300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01883">
        <property type="entry name" value="EF1_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050100">
        <property type="entry name" value="TRAFAC_GTPase_members"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23115">
        <property type="entry name" value="TRANSLATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="3">
        <location>
            <begin position="11"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23555" checksum="6B1BC253AB26D439" modified="2025-10-08" version="1">MTTEYNFHDNREHFNIVFIGHVDAGKSTTCGHILLLTGKTDERTICKYKEMAKEKNRESWWIAYIMDTSEDERNKGKTVEVGMADFETQKRRYSILDAPGHKNYVPAMISGAAQADIGILVISARKGEYEAGFQRGGQTREHALLAKTLGIGKLVIAVNKMDDETVNWSKERYDFIIEKTTVFLKQCGFREKGLNIKIFQFQLFSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW4</accession>
    <name>A0ABV2ANW4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002900</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001283">
        <property type="protein sequence ID" value="MES1921366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051272">
        <property type="entry name" value="RIO-type_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018934">
        <property type="entry name" value="RIO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000687">
        <property type="entry name" value="RIO_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45723">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE RIO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01163">
        <property type="entry name" value="RIO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00090">
        <property type="entry name" value="RIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RIO kinase" evidence="9">
        <location>
            <begin position="42"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="18626" checksum="9D625233B25AF4EB" modified="2025-10-08" version="1">MFIDITQANDEKENLMIIQNKQANQLNTAENRIEAKRSRIKDKSDFSVLEQVLDLKTKKIIQKLIKNDKIGQVLNTISSGKEAVVYQTKPPQNYENKNFGALKIFKITSMDFRKREKYFCGDFRFRNQNLRSNVRKMVKLWAEKEFRNLKMLLNFNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP07</accession>
    <name>A0ABV2AP07_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Coronin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">CORO1C</name>
        <name evidence="6" type="ORF">MHBO_002941</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the WD repeat coronin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001325">
        <property type="protein sequence ID" value="MES1921411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015505">
        <property type="entry name" value="Coronin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015048">
        <property type="entry name" value="DUF1899"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10856">
        <property type="entry name" value="CORONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10856:SF0">
        <property type="entry name" value="CORONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08953">
        <property type="entry name" value="DUF1899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM01166">
        <property type="entry name" value="DUF1899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3 4" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="DUF1899" evidence="5">
        <location>
            <begin position="3"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="124"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="167"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU280818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="284" mass="32644" checksum="57E1F1D989AEBF3A" modified="2025-10-08" version="1">MATLPRESKYRHIFHETATNTNCYTDINPDVFGDSQHIATNGKYWAVPIQAGGGGSFMVHNLEDTGRIQREHPLFKYHTARILELSFSKFNDNIIASSSDDCSVRVCNFPEEMTDNIMKEDVLLNGHSKKVTDLSWHNTANNVLASSSADKKVIIWDVEVGEEAIVIEDHEDLVYSIVWNDNGRYFGSSCQDRLIRILDPRDENASVLSTIGHENKKMSRVFWLNNRNMIGSVGFTKDSYRELAFFDLRKIEEAFLKKRLDRQTSKFFPYFEEGNDILFLSGFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC7</accession>
    <name>A0ABV2APC7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Poly A polymerase head domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003061</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001458">
        <property type="protein sequence ID" value="MES1921535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="entry name" value="Beta Polymerase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002646">
        <property type="entry name" value="PolA_pol_head_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13734:SF5">
        <property type="entry name" value="CCA TRNA NUCLEOTIDYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13734">
        <property type="entry name" value="TRNA-NUCLEOTIDYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01743">
        <property type="entry name" value="PolyA_pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="Nucleotidyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Poly A polymerase head" evidence="5">
        <location>
            <begin position="65"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1921535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18831" checksum="026E1C20D924A833" modified="2025-10-08" version="1">MQTPENMIKFIKRRSLIKLKDNSPIFRLCNGVRIKNVKINLTESEKKLVLLIRNTIDHFHLNSTARIAGGWVRDKLLGLNSDDIDINLDNLMGIDFVKKIENFSNLAEAKKLDLVKNKFGIGCIKSNPEKSKNLETATFCVFGISVDVNNLRTEIYGNESRVPTIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL6</accession>
    <name>A0ABV2APL6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">asparagine--tRNA ligase</fullName>
            <ecNumber evidence="3">6.1.1.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Asparaginyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">MHBO_003143</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>tRNA(Asn) + L-asparagine + ATP = L-asparaginyl-tRNA(Asn) + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11180"/>
            <dbReference type="Rhea" id="RHEA-COMP:9659"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58048"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.22"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.22" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001555">
        <property type="protein sequence ID" value="MES1921616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00776">
        <property type="entry name" value="AsxRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594:SF16">
        <property type="entry name" value="ASPARAGINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594">
        <property type="entry name" value="ASPARTYL/LYSYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="12">
        <location>
            <begin position="38"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1921616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="341" mass="39814" checksum="CD4BD599D61965F9" modified="2025-10-08" version="1" fragment="single">NLASPGEFSNIVDEKSNPSLAMDQRHLFLRLKENAQIFKMRSNIIRCFRDWLFDQDFTEVTPPTLVQTQVEGGSTLFHVDYFGSPAFLTQSSQLYLETCIASLGNVFCVVPSYRAEKTRTRRHVCEYTHYEAELPFIKFDDLLQHLEDIVVSVCELIVSRHGDLLKRFNPSFKAPKRPFKRMNHSEAIQFCREHQIYKDPNTREHFEPGDDIPEAPERQMIEIIGEPVLLCRFPAKMKPFYMQRCPEDNDATESVDLLMPGVGEVVGGSMRETNYERLKKGFEDKDIDPENYYWYLDLRKYGTVSHGGYGLGIERFLCWVLNRDHIRDVCLYPRFTNRCKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APW2</accession>
    <name>A0ABV2APW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003248</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001674">
        <property type="protein sequence ID" value="MES1921718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="33689" checksum="59FA8CE680214DF5" modified="2025-10-08" version="1">MFNFDELVKVEHSTLNSRLDDKISKEKSDFLAKKAIESFSEPLVSVQMNHPFKYSQISSKQNESGNFKTFAISEKTMKLSKTERSDEDYSNEISVSMSLDSESFSTSFVSEENLNINFDQLVKNQYFEILPLGNIQNSLNVKESAILQCYNSSYEKIETEHERPEIWELEPTTQFAFYPLKFSMHYGNLIEPFFCRAALYDISANKRISEFAEFAFNKEEEKCCFVFNCDPSPDIVLAVQINHIYSKDIEKSSFPHFNNQIDVSTSQKRLYRESLKPYENVFTDYLKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX6</accession>
    <name>A0ABV2APX6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SAM-dependent methyltransferase Erg6/SMT-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_003262</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001689">
        <property type="protein sequence ID" value="MES1921732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050447">
        <property type="entry name" value="Erg6_SMT_methyltransf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030384">
        <property type="entry name" value="MeTrfase_SMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013705">
        <property type="entry name" value="Sterol_MeTrfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44068:SF1">
        <property type="entry name" value="HYPOTHETICAL LOC100005854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44068">
        <property type="entry name" value="ZGC:194242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08498">
        <property type="entry name" value="Sterol_MT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51685">
        <property type="entry name" value="SAM_MT_ERG6_SMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM-dependent methyltransferase Erg6/SMT-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="160" mass="18129" checksum="0C6D3CA9E59DD14C" modified="2025-10-08" version="1">MFRILKPGGKLGFYDWVMSEKYDPKSKSHNDLKLSIERGNGIANLISKNDVFELLKKSGFEIIEFEDLAEYKTRISKGNDVHWNQVFAPGFSWDRLSMTKAARWCINKILLFFEIINLAPKGTSQIHNTLSKGADALFEAGQTGIFTPMLFVIAKKPVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ91</accession>
    <name>A0ABV2AQ91_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003372</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sel-1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001834">
        <property type="protein sequence ID" value="MES1921835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050767">
        <property type="entry name" value="Sel1_AlgK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11102:SF160">
        <property type="entry name" value="ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11102">
        <property type="entry name" value="SEL-1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08238">
        <property type="entry name" value="Sel1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="254"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="254"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00038101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="429" mass="47999" checksum="B06B74B59960A012" modified="2025-10-08" version="1" fragment="single">MLLKKSALLHSKRLSPLKALFSSKSDFLVDLAERGNANEQYELAVNFLDGSNGFEKDTQKSRLYMAKAASQGHPEAEAHMAKLLLAGKVVKKNVREAFRHFVRSASKGHVDSMATVGHMLHEGIGVDQSSAEALRWLKKAAEKGNFRAMCDLGFIYEKKDLHVAMRLAEKAGDVEKGNLPRSQRLAGSLEAKRRNPNEALNWFLRAAEGGDVEGMSSFGRLSIQLEMAKALSLDGKLANVEKVGTVKEDRNIEKEDRNIEKDGTSKKDGTVKEDRRQNGKNSKTKKRIDGKTENALKWMFKAANRGHKGAQRDLGFLLADSGPLELERNAKKAIFYLVTAGVFGMPDAYLRAAEILVDDEGRYKGVERNEERAKNMVKDARRTARESGMATLPIPTWHRLRDDPRLISDLIKAFEFEDGKRVRYWAGDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ96</accession>
    <name>A0ABV2AQ96_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003379</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001846">
        <property type="protein sequence ID" value="MES1921843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="128"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="128"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="37611" checksum="93B6AC2939FAF96D" modified="2025-10-08" version="1" fragment="single">TKVKLELKKQENESLKTELKSSQKAQISENLLLKKQLRDSRVSETNLRHSLLLRDISIRSLQKENLEINRICQNLEKDPLKISPINFDDSSNGNKLIRNFGKSVFREASLKAQIKNLEREIEFKNFSEHDEASKRQSENYFDDKNSKKVLNRDNEKTSKNVQSDNEKSAKIQIDENKKNDGLSAKKSMKDNLFRIKSDMTTELLSENQLSMKRLSLYSKTFDKEKSSSVNDLPNELKNVEDEIVLATFEKKKVSESLKIVEKSDYSERSKVFKAFSSSSSDVFAVLEKSSEEDIAANMLLIVQSIKDTPLWLHRERKRILSIVRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQD0</accession>
    <name>A0ABV2AQD0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003422</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001906">
        <property type="protein sequence ID" value="MES1921891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9055" checksum="E2489C9BA7815185" modified="2025-10-08" version="1">MEEQDNEEEPILSNNEEIESGNAMSVDAFTKLTKKVNRCHGVQPQQSNITAISSADISLHLHCGTLDRVGSCYTLQILFCNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN4</accession>
    <name>A0ABV2AQN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003327</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001773">
        <property type="protein sequence ID" value="MES1921794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="268" mass="31415" checksum="30C6C7A290498358" modified="2025-10-08" version="1">MCPFDSTRKSKFLSDNKINKKPKNIKNTKKSVPKTVKIPRKRKIRFKKKTTKNNNNHKMGTPSNLKTPRILTRLKKRMQTEKVGKEKKKLIKQQSAQRESSDFSECLNFADFSSLTNEKVESTAKKLLTRVKNFLTPNFDSIDNKSVLMEKEEGRLLHFNDLKNEKSAKINDSNDVKSGKNKSENVLKNKNFGEKIGLKEEEEFLRTPKIKFVKNKEKKQVESISNLLYKIDENVVQKNLSNPLRNLKKKVYKIFFRKRNFCSIKKEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR25</accession>
    <name>A0ABV2AR25_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003637</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002249">
        <property type="protein sequence ID" value="MES1922123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="72"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14373" checksum="87D7D7B3EBA509C2" modified="2025-10-08" version="1" fragment="single">MLSRGFQEQIYEILDGISSDYQVCLFSATLEKETLDIAEKFMKDPIMILVKKEQVTLEGITQFYISLNEEWKYDILCDIYDSVKINQCIIYCNTKRTVEWLAKQMLKDDHSVSMMHGDMEDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR47</accession>
    <name>A0ABV2AR47_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003622</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002224">
        <property type="protein sequence ID" value="MES1922107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="320" mass="37541" checksum="7A950E5A72CEAA32" modified="2025-10-08" version="1">MVESEPQSQECYKSSDTPPLSDAALLEDNIKTAPKKIISKKLKKNGLSLKTKKLFDAANENKKAPFDIQKKSSKEMRAEKYINWLKNEGYDVFSKKTKSSYAEIIPPTQNSHKQVSENTFKNNYTKKRKFLSQHNLNKKFDSKNYFSLLIKNADNKRMFLNNFKLKSFVCETFKDAVECDLLPFGDIRIFFNNIEDKVKALKSTDIKKFGDKAILTENSHSMYKIVIHHIPRYISEEDITRYFREIDVKIRSLTFKKLKNNEHFSTGFINLEEKSSYDMLIKAKKFTVARREFKISRYIDKKKLFNVIDVKNLAIQLKFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR86</accession>
    <name>A0ABV2AR86_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Fibrinogen C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003577</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002155">
        <property type="protein sequence ID" value="MES1922059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.215.10">
        <property type="entry name" value="Gamma Fibrinogen, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036056">
        <property type="entry name" value="Fibrinogen-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014716">
        <property type="entry name" value="Fibrinogen_a/b/g_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002181">
        <property type="entry name" value="Fibrinogen_a/b/g_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050373">
        <property type="entry name" value="Fibrinogen_C-term_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19143">
        <property type="entry name" value="FIBRINOGEN/TENASCIN/ANGIOPOEITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00147">
        <property type="entry name" value="Fibrinogen_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00186">
        <property type="entry name" value="FBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56496">
        <property type="entry name" value="Fibrinogen C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51406">
        <property type="entry name" value="FIBRINOGEN_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="domain" description="Fibrinogen C-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15351" checksum="0761DBCF157CA0C6" modified="2025-10-08" version="1">MDLYPGGWTVFVFFFCDWSFQLFTFSVRVRESLILNKLLLQVIQTRLRKNGVDFNRTWEEYKNGFGSVHTDYWIGNDVIHQLTTAHHNMLYMRIQDIKGAHYEEQYSDFKIADQSHNYTLTVSAGNGTAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARA0</accession>
    <name>A0ABV2ARA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003714</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002380">
        <property type="protein sequence ID" value="MES1922202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="34"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="6">
        <location>
            <begin position="10"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="20834" checksum="4A1F59D8CFD2A64D" modified="2025-10-08" version="1" fragment="single">MASVVTFGVIAVFVTVAGIRTPNYPSNFRPLSGIGFLQAFGALLFSFVCTDSIFPIYCDLKDPTPARWDKVVHITLFSLGVLYAVFSIICYFLVPYLDDYVLNSISIIDLPEINIAKLLLVITLLLTHLSNVHVSRAYVYAIIEKAIVPISKISKTKFRILHVAVTTITIIVTVILGIILNDLLFIIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARB3</accession>
    <name>A0ABV2ARB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Serine/threonine-protein phosphatase 2B catalytic subunit alpha</fullName>
            <ecNumber evidence="1">3.1.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">PPP3CA_3</name>
        <name evidence="1" type="ORF">MHBO_003423</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010001907">
        <property type="protein sequence ID" value="MES1921892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043360">
        <property type="entry name" value="PP2B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45673">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="19887" checksum="A53FD76ECBA1E545" modified="2025-10-08" version="1" fragment="single">RFLEENDFESIIRAHEAEKKGYRFLMDNEDGFPKVITVYDNKGAVLVISDGDLKVKQFRATTHPYYLPNFENLFSWSLPFMAEKVTDILETVINLTTNAEKKTAFISERKQILKDKITAISSILAIYKNLRSENEVVLKTKQLSPNSNRKMSDISNVGSGILNISSFEDAKIADS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARG0</accession>
    <name>A0ABV2ARG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003768</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002481">
        <property type="protein sequence ID" value="MES1922260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="259" mass="30173" checksum="6E559445DC349218" modified="2025-10-08" version="1" fragment="single">MAKKENEDNQQNPTLESSLAVLEKLFVVSKASEIEPLKKTFLDLVDFGQNYNSILNQFGECCDITLAVKKRIESIKSLQEKIEKDISKINNFIKIKENAEKIEKFCEISEFENASKLLNEILHKNNCYEFETTEQEIFKKLKDREIELQQRLSEESQDLLLKQNYDKLTDLSKIVARLNMQSTGLAIYSLSRSKLFAKKLDKSIDFEFNNLSEKDSLIEIARKLFDITIEELTEEEKKCRNTFQKNFMALLVNKFVVVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARW7</accession>
    <name>A0ABV2ARW7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003923</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002746">
        <property type="protein sequence ID" value="MES1922411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="320" mass="37665" checksum="67D3A61054C7DC02" modified="2025-10-08" version="1" fragment="single">KGPLIEILKYYKFRFEEIKLVLTNKETKKTFSLSVKIYNLLKLSSWKTKKQKKSFYSELEPFLLKPGLILKNHIARDQKILVNDISNKIVKLEVVQKNIFENDVSPKKVILEGKRIQKEFNRLTEYALDIVSNYKKSIFSENTLQIFSKNTLALYKLLINSFLNFDLSDNMDYINFYINFSPRKEKKQLKNVEKFLKKNKNLNLEKLLAIASTIFVAKESIDSLLALLDLEFENLNTSKRVGQTIMPEKFEKIVLFIGYKTIFNDLSDCTDILYKRNNKKLILYSSLKKEYETTFKIIENIVDRCAFVKIMESCFLALMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS51</accession>
    <name>A0ABV2AS51_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002369">
        <property type="protein sequence ID" value="MES1922192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="83"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="267"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="41268" checksum="8262FA29D81D69F4" modified="2025-10-08" version="1" fragment="single">MLIKEKLLKPSLKFLDRSDEQKKQSEQTQYQIHKEHFESLQKQHQKHKSDKNISEALKTTTELQKLLKEKILPLNEKSRETLKKLSEEKMERLEDSVSNVKKETNKIDQKMEKAKNDLTELEKISPIPKDEENNLKKECKSTEAKIEEERKILKEKWGKIFNASKKFIAAIKKLSKLKIELSKKEEKLESTQFKTLRWEEAKTDRKEQLGKFIEEMSGAKTYLGKLEALLARGVGCLLFTQKKQLDAVQRREGSLKRDYDTSFEFLRSSLETDVGNKEKQLLRLEKMEKSLEMQLEEAVELMDEESVESLKEQINNLPQKKERLSNKIKNLKEEIGAMVEKSGKNKNLTKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS62</accession>
    <name>A0ABV2AS62_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004019</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002971">
        <property type="protein sequence ID" value="MES1922502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.30">
        <property type="entry name" value="MOB kinase activator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036703">
        <property type="entry name" value="MOB_kinase_act_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="88" mass="10290" checksum="9BB0D8AC9E7D270F" modified="2025-10-08" version="1">MGNSKSRNKSFKEKKIDDDVDQLFQEELMLKHQRNNGLQKTIRANMKETLKGTRKIKETVVVPEGESENEWISIHSLFSFFDLAIIIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF6</accession>
    <name>A0ABV2ASF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_004124</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CDC45 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003205">
        <property type="protein sequence ID" value="MES1922606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003874">
        <property type="entry name" value="CDC45"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10507">
        <property type="entry name" value="CDC45-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10507:SF0">
        <property type="entry name" value="CELL DIVISION CONTROL PROTEIN 45 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02724">
        <property type="entry name" value="CDC45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="17768" checksum="BC6570880FC71823" modified="2025-10-08" version="1" fragment="single">KKLPVLFKGIRLSSEKSKSVTRQGCLILEKRSFVSSGPFRYVVIDELIDQTLAINFGHLRCLGLFLVHALETFFKGVSKPLVVAALNKDKGTYSIVGYPSKTLGDFQKNVFGNAFREAAESTESRYRQESFETNFLEIQKEDNSKFFEHLHSGLIDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASH2</accession>
    <name>A0ABV2ASH2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Activator of Hsp90 ATPase AHSA1-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004024</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AHA1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002982">
        <property type="protein sequence ID" value="MES1922509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.15.10.20">
        <property type="entry name" value="Activator of Hsp90 ATPase Aha1, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036338">
        <property type="entry name" value="Aha1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015310">
        <property type="entry name" value="AHSA1-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13009">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09229">
        <property type="entry name" value="Aha1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01000">
        <property type="entry name" value="Aha1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103111">
        <property type="entry name" value="Activator of Hsp90 ATPase, Aha1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Activator of Hsp90 ATPase AHSA1-like N-terminal" evidence="2">
        <location>
            <begin position="64"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="22050" checksum="154D4DBA8D5FACB1" modified="2025-10-08" version="1">MDKKTSKDYESMVDNSKYYAFNSRHSETEAPKKLSDITLKPKKDCVKNEGSCLSDWNKQKTWEERDYSKESIEKLKKILTGKVLSSDDFSFRLTEISKLDGKTIVLFVRGKKRFSIDLAIKGKWVAEDDEEVKGTFEIPLFEESDDFELQVKTDKRTKKDFDARRSFLKTKKHFERILGAFESEFRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM3</accession>
    <name>A0ABV2ASM3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004191</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003382">
        <property type="protein sequence ID" value="MES1922671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9406" checksum="5D6EA59A6938528D" modified="2025-10-08" version="1">MPKMLLEFENGVIKWKFSGGIKIGSAFVFNKKFKPRVFFDKEQMVLSYFNNEEGKIFDQIIPYSAVAACTVFNILLSFGNLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASS0</accession>
    <name>A0ABV2ASS0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004239</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003496">
        <property type="protein sequence ID" value="MES1922714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="entry name" value="Decaprenyl diphosphate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001441">
        <property type="entry name" value="UPP_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018520">
        <property type="entry name" value="UPP_synth-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291:SF43">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE COMPLEX SUBUNIT DHDDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01255">
        <property type="entry name" value="Prenyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="Undecaprenyl diphosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01066">
        <property type="entry name" value="UPP_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="7200" checksum="47F5A2A5819A6AD0" modified="2025-10-08" version="1">MRSKNLTEPDLLIRTSGENRLSDFLLWQINRKTKIVFADKFWPEFTNFDLLKILTKFYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT17</accession>
    <name>A0ABV2AT17_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004039</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003018">
        <property type="protein sequence ID" value="MES1922522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="20572" checksum="8A59F095BEE1DADE" modified="2025-10-08" version="1" fragment="single">MSEFGDLSSTCFNVETFTTKNINVNNENTFYSALKTILPCNKQYVKMGDENIKNKYLNATDYLATKWDKKSHATKVLLYRKRKRKIDFENKIKNANFDDLNEAANHFLKFKKYLIKFLRLPRTLLEICEYLERNEIVGSKTTNSQIYRILLLLCKDNPNFKDLKLFTFFNNFSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF6</accession>
    <name>A0ABV2ATF6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004481</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004132">
        <property type="protein sequence ID" value="MES1922950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="155"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="232" mass="26429" checksum="701172E679C9F014" modified="2025-10-08" version="1" fragment="single">KNSQRPEEVLFLSDPRNNSLRLFKLPLNYNKPIPKLVFRDHCAPISVLVTPLSNKKVGGDSWSYFMMSGDLAGHIPVQTSIALAVGVETDYGHFVRSRHRRERSPGNEFDRLSRFISVFQALSDVPSWPQNRECSCRNDFCYKKVASGNSNNRDAGNEANERSADSCSNKTKKQNFSRLSEEDLKSENNAKRKKISNANLHCCREKSEKRFGRLENGYHFKNQKIVVSVEGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATH1</accession>
    <name>A0ABV2ATH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Exosome component 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">EXOSC3</name>
        <name evidence="5" type="ORF">MHBO_004499</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004185">
        <property type="protein sequence ID" value="MES1922968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="entry name" value="K Homology domain, type 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026699">
        <property type="entry name" value="Exosome_RNA_bind1/RRP40/RRP4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21321:SF1">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT RRP40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21321">
        <property type="entry name" value="PNAS-3 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15985">
        <property type="entry name" value="KH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21262">
        <property type="entry name" value="RRP40_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0271">Exosome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="139"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF15985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1922968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="218" mass="24225" checksum="3ECA1DBAB44052D9" modified="2025-10-08" version="1" fragment="single">NVDLKDNKRSLLSNGLSCDRKSIVVTKTGPLAQTNSIWIDSKEKIYTPRKGDVVVGIITKTKLSQYVLDINAARHGLLPCLSFRGASKRFKPNLDIGDAVYCKVSLADKFLEAELTCISESCKKEWSTGEAYFTNLEGGNLLALTPSLSRKLMSSEKKFALDFMGKYVPYELAIGLNGYVWVNSIDNRKTIIVSNLIECILAEGDSQKNLQMINHLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL7</accession>
    <name>A0ABV2ATL7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003694">
        <property type="protein sequence ID" value="MES1922781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17393" checksum="AEDE6F182F3CE547" modified="2025-10-08" version="1" fragment="single">CKHYIINYGIYKSKFILDYIHENINTFVNMENELLTFVFGFESDIILLIRLKKTIISKSPIFVQTVNGCRLIRIITNSASKDDLKKIFESILDYKPTSNVLVDLLLNSDFEERKVIIKHFNKNPSFFKRKFYKMLPKSIQEMVQKIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR0</accession>
    <name>A0ABV2ATR0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Ubiquinone biosynthesis monooxygenase Coq7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">COQ7</name>
        <name evidence="8" type="ORF">MHBO_004561</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004406">
        <property type="protein sequence ID" value="MES1923027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01042">
        <property type="entry name" value="DMQH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01658">
        <property type="entry name" value="COQ7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011566">
        <property type="entry name" value="Ubq_synth_Coq7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11237:SF4">
        <property type="entry name" value="5-DEMETHOXYUBIQUINONE HYDROXYLASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11237">
        <property type="entry name" value="COENZYME Q10 BIOSYNTHESIS PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03232">
        <property type="entry name" value="COQ7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="Ferritin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 8" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0830">Ubiquinone</keyword>
    <keyword evidence="2" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1923027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="21996" checksum="57A3FE2DB91438F4" modified="2025-10-08" version="1" fragment="single">QNEKQNEAKKQNENYFSRPPVQIRSTIDEMIRVNHAGEYGAVRIYQGQLSVLKGTREEPIVEHFLEQEKSHLDGCNESIRRYRARPSALIPLWDIAGFALGAVTAAISKDAAMACTEAVETVIAEHYNDQLRTLHTEPYSGYGDLRTQIRKNRDDEIEHLEKSQEEGAKNAVPYELLTGAIKIGCRMAISIAKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATR4</accession>
    <name>A0ABV2ATR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Methionine adenosyltransferase sam2</fullName>
            <ecNumber evidence="3">2.5.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SAM2</name>
        <name evidence="3" type="ORF">MHBO_004352</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010003826">
        <property type="protein sequence ID" value="MES1922826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022628">
        <property type="entry name" value="S-AdoMet_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="S-ADENOSYLMETHIONINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00438">
        <property type="entry name" value="S-AdoMet_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="S-adenosylmethionine synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-adenosylmethionine synthetase N-terminal" evidence="2">
        <location>
            <begin position="10"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11615" checksum="89D38B057431A47B" modified="2025-10-08" version="1">MLPNLKETEFLFTSESVNEGHPDKICDAISDAILDACLEKDPHSYVACETAIKNSLVMVFGEITTTAHPDYEKIVRNAIKFIGYDCETKVLKFFFFRNFLSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV8</accession>
    <name>A0ABV2ATV8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003851">
        <property type="protein sequence ID" value="MES1922838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01800">
        <property type="entry name" value="Ubl_SF3a120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035563">
        <property type="entry name" value="SF3As1_ubi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="1">
        <location>
            <begin position="3"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10170" checksum="B23D7DD2E4A0EF6D" modified="2025-10-08" version="1" fragment="single">INVSVTVRVPKDDSRKEWLFQGQVLSIPMKLSDNVATLKIYIGKNLNAMPVKKMKLKVVGGSFLKDGLSLAYYNITSHVPLEIGVKARGGRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATY2</accession>
    <name>A0ABV2ATY2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">LIM zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004667</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004775">
        <property type="protein sequence ID" value="MES1923125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08368">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.950.10">
        <property type="entry name" value="Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003128">
        <property type="entry name" value="Villin_headpiece"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036886">
        <property type="entry name" value="Villin_headpiece_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24205">
        <property type="entry name" value="FOUR AND A HALF LIM DOMAINS PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24205:SF16">
        <property type="entry name" value="GH01042P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00132">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47050">
        <property type="entry name" value="VHP, Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51089">
        <property type="entry name" value="HP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 5" id="KW-0440">LIM domain</keyword>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LIM zinc-binding" evidence="7">
        <location>
            <begin position="51"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="HP" evidence="8">
        <location>
            <begin position="187"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="104"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="240" mass="28125" checksum="0C23CDB430F238C7" modified="2025-10-08" version="1" fragment="single">DDEQVKIAGMCVHLECFVCEYGKEKLNIDQTIKISSKKLYCEQHFLNNVVKRCYSCEKALLEHYVTVLKRQYHPSCLNCEQCNINLAESTPVSVSDKLFCKKHGEEAALRNKRLQKEKNEAARKKLEEENKRLREEAIKAEEEKKRAIEAENARIAAIEAENARIAAIEEKRQREERLKKEELKKSEVVLSEYTLEEVRETKANFKLPLNFNKSRKEEYLAPDVFQGLFMMTLSEFKKYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ8</accession>
    <name>A0ABV2ATZ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004693</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004893">
        <property type="protein sequence ID" value="MES1923150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="188" mass="19536" checksum="C785B1A9CE74EABC" modified="2025-10-08" version="1" fragment="single">MEDVSGGGEAPEDIRNKLQSLTGDGRLDASAVKNIPPTAWGSITGKPNDLVQDASYVHTDNNFTTSNKTKLASVETGSEVNDSAIAITVKLESLSADDRLDASAIKNLPTPGTGVNEFTQLTDTPTAYTGAGGKFLAVKSTVNGVEFVDVPTGTIGIGQTYGDYRKGTVGEIEVANPIALTFDPDGKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUG0</accession>
    <name>A0ABV2AUG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004804</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005344">
        <property type="protein sequence ID" value="MES1923259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="86" mass="9878" checksum="7BDB8B4011C64C63" modified="2025-10-08" version="1" fragment="single">EVYEILRGENDDEKSILDKIESGFIIEVIVSADRVTRKLKCELRADKSKLSKTKKEGENHSRLAQNNYKMDRFGNSKVTKGPNSDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUP4</accession>
    <name>A0ABV2AUP4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005953">
        <property type="protein sequence ID" value="MES1923389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7158" checksum="260C68813D60DCE6" modified="2025-10-08" version="1">MQIWTYYPPSKSRVMLVTVASPKVTLISMRVLMKVILMTEVPKIVILLKVVCVKNMLRKLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR1</accession>
    <name>A0ABV2AUR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004764">
        <property type="protein sequence ID" value="MES1923123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="8"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="23927" checksum="4B04DB45AE547FFD" modified="2025-10-08" version="1" fragment="single">IEILGTDVSKSKSEVDELLATLQKLNKENTTLQEGLIGYRSECERLTTKLAEFEQLQARCVELEQKLSEAFERDAQSDQLNTELRNIIGQREEKLMSYDQHIASLKTRNTELENQVIASTEELNTRIQAGAQANNTISIQLGDVMNDNQRLESAKNALEERLRYCETESNRLGGIFGECEQLRAQCGTLEQKISNMTEVVKEKEERIDQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS8</accession>
    <name>A0ABV2AUS8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004986</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006105">
        <property type="protein sequence ID" value="MES1923419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="91" mass="11104" checksum="3F47370D2D6325A5" modified="2025-10-08" version="1">MIKKHHLIMNELHHKMKWHYLITKEPQHIMKKPHLIMKKPEHEIQKHHLIHNMKKNNITHHGITTKHNAKEPLLHEKHQHKVVIAFHIGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV1</accession>
    <name>A0ABV2AUV1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-dependent RNA helicase ddx46</fullName>
            <ecNumber evidence="4">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">DDX46</name>
        <name evidence="4" type="ORF">MHBO_005020</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010006244">
        <property type="protein sequence ID" value="MES1923448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0347">Helicase</keyword>
    <keyword evidence="1 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="3">
        <location>
            <begin position="1"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="14416" checksum="AB31C8A48198F7EF" modified="2025-10-08" version="1">MFRHILDQEKRKLDEGPIAMVLTPTRELAKQIFAETKKFASSLNQRVVCCHGGTTVADQIADLKRGADIIVATPGRMIDMLSSNGGKVTNARRVTYLALDEADRMFDMGFEPQISALLNCIRPDRQVCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUY1</accession>
    <name>A0ABV2AUY1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005058</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006408">
        <property type="protein sequence ID" value="MES1923480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12062" checksum="5447DFEE87E57F1F" modified="2025-10-08" version="1">MELMENLESYKSTWVDGRLAGLYAEAISALSDAGELSEADRTQLQQLKQNDDGGILDFVLDVANAARKGARFSRAAAPLILADGPLPFGDVVFAVALGLDFAIAAYDVVVRDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV40</accession>
    <name>A0ABV2AV40_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005101</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006605">
        <property type="protein sequence ID" value="MES1923518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="151" mass="16376" checksum="E164DF72E2C2D6D0" modified="2025-10-08" version="1" fragment="single">MFGADPEILVVNGGKIAHCIGLLGGTKEKPFRVEEGAVQEDNVAFEFNIDPTSDRKVFLDRIQKVMSQGLSILGKDFEFSKAASHVFSADELKQMPPQAMVFGCDPDYNALTGDVNPAPRAMDPGLRSAGGHVHIGFGKDIAINEDNQRLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV45</accession>
    <name>A0ABV2AV45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005703">
        <property type="protein sequence ID" value="MES1923339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="6947" checksum="E8959BEE49EDDEF3" modified="2025-10-08" version="1">MKRKRDDILEDPRPEKFRKMEGYTYFVRNVMVNYCAHTSQGLALRYIFPPANLQVPKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV77</accession>
    <name>A0ABV2AV77_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004854</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005538">
        <property type="protein sequence ID" value="MES1923302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8485" checksum="9DF731FC27A1F82B" modified="2025-10-08" version="1">MDVQEQEKHKLRKLYDEFSRIKENMNKEQCEELNAANPDFERELMQRKSDLKREHEAVIIAGISQEIVPRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV93</accession>
    <name>A0ABV2AV93_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005177</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006992">
        <property type="protein sequence ID" value="MES1923581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="45"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="99" mass="11740" checksum="9A4223D340BB23AA" modified="2025-10-08" version="1">MDKKSDKTEQRKLANKRNARNYRIRAKIKEAELLEAVNITLPAEIEDLEINIKEVKIEAENNNIMLNEYIKTKKHELDDILTRVKEIKKKYANYDPNLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA3</accession>
    <name>A0ABV2AVA3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">snoRNP complex protein nop56</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">NOP56_2</name>
        <name evidence="3" type="ORF">MHBO_005170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006954">
        <property type="protein sequence ID" value="MES1923574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.90">
        <property type="entry name" value="Nop domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045056">
        <property type="entry name" value="Nop56/Nop58"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042239">
        <property type="entry name" value="Nop_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002687">
        <property type="entry name" value="Nop_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036070">
        <property type="entry name" value="Nop_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10894">
        <property type="entry name" value="NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10894:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01798">
        <property type="entry name" value="Nop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89124">
        <property type="entry name" value="Nop domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51358">
        <property type="entry name" value="NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nop" evidence="2">
        <location>
            <begin position="4"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="128"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="16718" checksum="BB604012BFEA5EFF" modified="2025-10-08" version="1">MKHCAPNLTAVIGETVGARLISHAGGLLNLSKCAASTVQILGAEKALFRALKTRTNTPKYGLIFHSSFISRAKRRDKGRISRYLANKCAIASRIDSFSEENNDVYGKKLFEQIEERLEYFESGKRPKRNVETMRSAEIEKKRSKKIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWK0</accession>
    <name>A0ABV2AWK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005207</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007143">
        <property type="protein sequence ID" value="MES1923603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="5"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="54" mass="6434" checksum="0E0A7D11E48B6662" modified="2025-10-08" version="1">MRANRERSELHVANYKDLLKKAEAQQKKVDDLDKRIKAIKMKGNFHTNYLEFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEC7</accession>
    <name>A0ABV2AEC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000072</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000009">
        <property type="protein sequence ID" value="MES1918046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003889">
        <property type="entry name" value="FYrich_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003888">
        <property type="entry name" value="FYrich_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040092">
        <property type="entry name" value="TBRG1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22715">
        <property type="entry name" value="TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22715:SF0">
        <property type="entry name" value="TRANSFORMING GROWTH FACTOR BETA REGULATOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05965">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05964">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00541">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51543">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51542">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="457"/>
            <end position="478"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="478" mass="55253" checksum="ABF4292BEED99399" modified="2025-10-08" version="1">MLKERFSNLLAIIINFNKINNKTGFEENEWSVLEHYYFLHALASFGMPSDKNWSDFEKSFPNLFRNKTANSVQKRIKLLKEEIEICLKSDKNEIKDFKNGDLSNKKIVKLTQKGALNLKRRFDFFKLLRDKIKTLNISSLNFEWREQPPVWWDSPKMDLDLLKGCLKYGVGNWVKLKGDKNYQFSNSPQISFRHIQKLLLNRFMSLGQFIISGKNNLSSNPIKNNYKNNFSFFLNNQSPKIASKMQTLTNQNSLLKIQKTPNNKTQIPFNFNNGNNKKENFLLKPNKIFKSIDIRPVPQNNSMITPSLLLQSIGNIEFLRSNFHNNSYIFPIGYKTVRKYISFVDPTKNCKYVNEILDGKSCPIFSVTCEHAPNSPIQQIHPTSAWKLVNSKIKLANPNKTVLVPIDGLERFGLNEPKIRSLIDRLPNVSKCKQYGSQFKVGSFGYPFNLNPVSNVGNNSRSKMLHKKNNVPPPPKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AED4</accession>
    <name>A0ABV2AED4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DNA-directed RNA polymerase subunit beta</fullName>
            <ecNumber evidence="9">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">POLR3B_1</name>
        <name evidence="15" type="ORF">MHBO_000095</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000012">
        <property type="protein sequence ID" value="MES1918073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00653">
        <property type="entry name" value="RNA_pol_B_RPB2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1100.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.270.10">
        <property type="entry name" value="DNA-directed RNA polymerase, subunit 2, domain 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1800.10">
        <property type="entry name" value="RNA polymerase alpha subunit dimerisation domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007120">
        <property type="entry name" value="DNA-dir_RNAP_su2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037033">
        <property type="entry name" value="DNA-dir_RNAP_su2_hyb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007121">
        <property type="entry name" value="RNA_pol_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007645">
        <property type="entry name" value="RNA_pol_Rpb2_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007646">
        <property type="entry name" value="RNA_pol_Rpb2_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007647">
        <property type="entry name" value="RNA_pol_Rpb2_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007641">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014724">
        <property type="entry name" value="RNA_pol_RPB2_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04565">
        <property type="entry name" value="RNA_pol_Rpb2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04566">
        <property type="entry name" value="RNA_pol_Rpb2_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04567">
        <property type="entry name" value="RNA_pol_Rpb2_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00562">
        <property type="entry name" value="RNA_pol_Rpb2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04560">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01166">
        <property type="entry name" value="RNA_POL_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9 15" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9 15" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 9 15" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="RNA polymerase Rpb2" evidence="12">
        <location>
            <begin position="100"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb2" evidence="13">
        <location>
            <begin position="200"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb2" evidence="14">
        <location>
            <begin position="282"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="DNA-directed RNA polymerase subunit 2 hybrid-binding" evidence="10">
        <location>
            <begin position="330"/>
            <end position="697"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb2" evidence="11">
        <location>
            <begin position="699"/>
            <end position="782"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF04566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF04567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="MES1918073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="787" mass="89201" checksum="DB075537C16B9907" modified="2025-10-08" version="1">MVNSGVANFDDKDYYGNKRLELSGQLISILFEDLFKRFNNEVRKHMDNTLQKKTRGQEFDAVKFLKMRRDIITKGFVHTISTGNWTLHRFNMDRHGVTAVLNRLSYISTIGHMTRISSSVEKNRKISGPRALQASQWGMICPSDTPEGEGCGLIKNLALLAHVTTEEDDQILISIAFALGAEDIKNCSRDFYTDKNAFVVFVNGRAIGIHFDYQKFVNSFKLLRRKGLIHRFVSVYHHEDHRCLYIASDEGRVCRPLIIVDNGQPLVTKKHLIELEDGLSTFEDFVLNGLIEYLDVNEENNAFVALNESHLSRSTTHLEIDEMVILGFVSGLIPFPHHNQSPRNTYQCAMGKQSMGAIGLNQHLRLDTLLYNLVSLQKPLVKTKTLDFINFDKLPAGQNAIVAVMSYSGYDIEDAIILNKGSVERGFGKCVVYRKHTTSISRYVNNTFDKISKDKTERNSTGLCEVDSKLNPRDIIVNKFSPKNTLVVSENTSYRHNPLVYREREPAIVDKSLKVRSSNHYILKVMATSNTNDHFLLKILTRETRSPEIGDKFSSRHGQKGVCGLIVPQCDLPFNQDGVTPDIIMNPHGFPSRMTIGKLVEIIAGKVAVLEGKLKYGTAFGNEQISDTCEALLKHGYNYSGKELLYSGITGEALESFIFMGPVYYQKLKHMVADKMHARARGPKTTLVRQPREGRSKEGGLRLGEMERDCLIAYGTSMLLQERLCFSSDKYTVLVCRDCGMMVYKEWCNLCKKKTDMAMLTIPYACKLLFQELISMNIVTKIRLRNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEJ3</accession>
    <name>A0ABV2AEJ3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000133</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="91" mass="9923" checksum="56CE7B9DBAA065C8" modified="2025-10-08" version="1">MLSFSSPVRSLPRTAFLLGLTPIVLGTDKLFSSSSAELNLKTSSLFTEPPPGILARMLSFFPSELWQSDANPRFKFSSSAIEQSNRRGGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AER6</accession>
    <name>A0ABV2AER6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">28S ribosomal protein S5, mitochondrial, variant 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">MRPS5</name>
        <name evidence="3" type="ORF">MHBO_000205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000026">
        <property type="protein sequence ID" value="MES1918199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005324">
        <property type="entry name" value="Ribosomal_uS5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03719">
        <property type="entry name" value="Ribosomal_S5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS5 C-terminal" evidence="2">
        <location>
            <begin position="724"/>
            <end position="766"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="882" mass="101386" checksum="398C1A05A02E9080" modified="2025-10-08" version="1">MRPKLCVSRWRNRLKWQQAGDLSTLAKKRYWEDNKDLCKLTLQNEEYFGRTNAPRKANRISRVAVNTRRDLLKLRRINESLGEDSIVHFNETSPVRAKARANNSQLGDDAEDDPEDADDDGKDDQDEPAAGEAALIGKDFYARVEEMGINAKTHRDHEARYEGLKRDYLRYRRKREYQRLLELGIVHRRPRRVTRRQHERFKVFSSLQEFLATGEYRYGKARGPSYLPGEHGVLVRRDIYERKAGELATLHSADSAGEPRLAKQPENFLSVEDARAIQRATPRELAEAVRRKRFATWEEKLEWARGAMDRLSRSIQFYEGLVSNMEMQREVESVSAIRGKLFVEQKKLRESPLFRRVFAGLRGRDEWRSRLSESVVARAREGIAKLREKQILLKREVEGDDFAHSDPFIGALATKMALDRERDMSDETVLEENPFRGRLVLRANDLQRNQIHLANPDLFVRFKPQNWRKLETDYLKLEETRDRAESASFVAGDEGVGAHKQHWHNDARHEPEKFTLRELQPWATAILNGLQPQKRPPSANVYVQAMRELMAEQLGDSTAAVLLAERFPHGRVDIEPTEMETRYLWDEQNTDVNFGRLAVKWFLAQNLGPAVGHAYNPFRRFMGPVDFGDSFTWEELLEKTEGAGENSLKTIILHRHRVSHRKKEGEIDSAKKLFLTGNAKGAVGFYYGKDGSEMGGERMDRLARFSVEGVPLYRLGCIHHNVSAKFQGTEVRIIATPPGYGLVASPFIRTILHFAGVRNATAMVLTRTLAHRQQEQGEHFQGVCPRAEKGFLLNLQLSSLDEVASTRGKKVYEVVGEYDGNSYKLPEGFEEATRSSVRETLYDFAKAFHDSEFQALTMLQIEKDRGLRSRQKLLQAGLPDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEX1</accession>
    <name>A0ABV2AEX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000028">
        <property type="protein sequence ID" value="MES1918211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="219"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="290"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="319"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="359"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="390"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="430"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="511"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="547"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="592"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="620"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="620" mass="70567" checksum="53CF718B98C7A405" modified="2025-10-08" version="1" fragment="single">MPSKITPNENGLLVFLGILLGFCKAPILAKLVTLIWSTLTSKEWDIFNPSNWPTGGKTTYDAFSERLETFASMYFVTFFLFLVSFAAYIILCGGTVMIGKGTFRDRTKFSYFLHISGFTGARIDVILYQCILFACIIVGEDTLNLRGKIISPSLKKSYVNNFFDLLLNDKAFPIGLIGFFTISIVLSLLSSVSKKFDHPSVAGYVDVPKPSIQKNNLKSWTTVIMLINITYKIFFFVVYLEQWKNDKISKDTWNTEFIDIFKLSLFFGFIPLSIFREGYLLFVTNEREKVHSVTTINSFFMMYLLFTTYQFDSFKQNNIYFFLIPLMILLNLICYAIVNWRQMINLAIFLCKKGSSNSTVAAISLIFFFFFSISGLILHAISFPEQWFKFHFKFFPVLQALIDFAKILFEIVKSIMSFFKSLMEIVFNDALSLLLCIGLFIMILLAIALNFIPFGGGSGSYFATIFPKLTRKLKKFGEIVVKFRSSAKSIKKYAGKISGMSDPVTVDVSQFLGIILMTICLLPQVLGIAAMSLAVFERFTDIGRIDLSIFGIVFIVLTTIFLTVLLTIKFIIVREFDLGIMVIWFSTTSDFTMLIASFAFAFIAVIAYFLHLICFKETNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEX9</accession>
    <name>A0ABV2AEX9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ubiquitin-like 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">UBL5</name>
        <name evidence="3" type="ORF">MHBO_000234</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000030">
        <property type="protein sequence ID" value="MES1918235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01791">
        <property type="entry name" value="Ubl_UBL5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039732">
        <property type="entry name" value="Hub1/Ubl5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13042">
        <property type="entry name" value="UBIQUITIN-LIKE PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="2">
        <location>
            <begin position="2"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8604" checksum="51357B41284287CD" modified="2025-10-08" version="1">MIEVILNDRMGKKVRVKCNPEDTIGELKMLAAAQLGTRPDKLRIQKWYNIYKDHITLDDYEIKDGMGLELYYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF36</accession>
    <name>A0ABV2AF36_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transmembrane anterior posterior transformation protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">TAPT1</name>
        <name evidence="7" type="ORF">MHBO_000092</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TAPT1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008010">
        <property type="entry name" value="Tatp1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13317">
        <property type="entry name" value="TRANSMEMBRANE ANTERIOR POSTERIOR TRANSFORMATION PROTEIN 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13317:SF4">
        <property type="entry name" value="TRANSMEMBRANE ANTERIOR POSTERIOR TRANSFORMATION PROTEIN 1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05346">
        <property type="entry name" value="DUF747"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="341"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="375" mass="42322" checksum="B0FDB130C259D355" modified="2025-10-08" version="1">MALFKFFFESVFVSGHVEPASPEEMSRVRKRVDDFFYTFVYLEKTILFGVVLCLDAILEPLVSTFRVFALKLDSDDFWRDLFSIALVWQGFAVLTYVNVSKAYHLVRGQSTLKLYVLIGILQMFNTLLGSVGAYFQKDLFAAPTRRPSRDVARSLFIAALYVDVHATVQLTMLVTLNAAINSKTDAVLGVFFLNNMAEIKSFVFKNYARPARLGRVVLLDVVERFGVFFHLALILAHSLSHFSLGAEWVRRFALLSLVYLALEVGVDYLKHAFISLTNGVDPVFYERVFTLLCSDYLSQKKGVRVFPSAVPAHERMQFPAIAMAALGWRMTFRAIVTVGGFAFLVQSIVCLLLLKGILAMWLTSASSERLKKHLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFC7</accession>
    <name>A0ABV2AFC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alkylated DNA repair protein alkB 8</fullName>
            <ecNumber evidence="6">2.1.1.229</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ALKBH8</name>
        <name evidence="6" type="ORF">MHBO_000357</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.229" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000052">
        <property type="protein sequence ID" value="MES1918386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106335">
        <property type="term" value="F:tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.590">
        <property type="entry name" value="Alpha-ketoglutarate-dependent dioxygenase AlkB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027450">
        <property type="entry name" value="AlkB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037151">
        <property type="entry name" value="AlkB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051422">
        <property type="entry name" value="AlkB_tRNA_MeTrf/Diox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13069">
        <property type="entry name" value="ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13069:SF21">
        <property type="entry name" value="ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13532">
        <property type="entry name" value="2OG-FeII_Oxy_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="5">
        <location>
            <begin position="213"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="617" mass="71866" checksum="E9CFC78DA4E62CB9" modified="2025-10-08" version="1">MALKKRITCVEKEKSKMGSFQFDKSKEPTKHLFVVNVSDSDNPPNKTTIQKFFTRYSKYVSVYNSHSNSCVNVTLDSVECALKAKIDSKRKDFSLNGRKAKISFSSLNFKRNINFSNQAECVCETKDCANPPGLVYIDNFVTEDEEQRLIKQIDDYKWISDFGRRVQHYGFRFSHIDREVDLNETDVTEIPKSFIQNFGERLEQPFLKDSFNKTDQITINEYKNSNGIRYHTDSHTSFKDHIFVLSLGAPIVMCLRLPDNSQNKLYFLRRRSMLILSDRSRFVWQHGIALRKTDRNCLVPDHKNGLVARGRRVSITYRRVNLDQKCRCEFAKHCDFRTKGKTNFEKLPEIEKENVHNVYSMIARHFSHTRGIKWPKVLKFLSRVRKGSLVVDIACGNGKYFEAIEDDSVLIGFDICSELIQIAKNKNFTNKKNFDVLVADALKTPLKSQTADFVISVALLHHLSTLKRRKECIKEMLRILKPNGLLFICAWAFEQEKDSRFKFSEQDCLVDWNLQLKHISEKDEDFLEKMDGKMREMVRIRRNNSEVMCTVPRYCHVYKKGELDKIVKSASEMDESGRTEIIESFYDKGNWCLVIKKICSFGTFFLANKIISLALHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG2</accession>
    <name>A0ABV2AFG2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000409</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000062">
        <property type="protein sequence ID" value="MES1918441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="120" mass="14031" checksum="FDC93B19CC327518" modified="2025-10-08" version="1">MTEEYVKKVQNNSPFFVDFLKTHMFSTFIQKHTIHPGLLFDLVEYICHNNNASPSNAMKMETIKLKIPADLDAAHAILHSKQTKSDKWNGYETDALLEKSNRENEKPKNRNLISRFNFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFS0</accession>
    <name>A0ABV2AFS0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ZZ-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000296</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="275" mass="31506" checksum="D0C898F0DF8A4C03" modified="2025-10-08" version="1">MDCILNKSVYDNDSVMCDVCKFNKLEKGHFYWHCKNCSYDLCDKCASNNPSNTPSKNDANCNNIEEDINTNLKTKVEEDMNINNFQKTKSNNFNNDKNKSSKIDEKILTLFGKKESDSFFTQCQMYKMPVTIAPSNFDFNDNKIFETVFSKSEISEEENSEKISDLEISEISKTASITNEKITVLIKFSPKHEDLFIKNAAKKLGINKNMIKLRLFKNGMTAVDIKNSDLDVTEKMCNTLIKIAAKRKFAEDVKKCTDVEITKICNVFNTVLFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFY6</accession>
    <name>A0ABV2AFY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000093">
        <property type="protein sequence ID" value="MES1918606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05121">
        <property type="entry name" value="ABC1_ADCK3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051130">
        <property type="entry name" value="Mito_struct-func_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43173:SF34">
        <property type="entry name" value="ABC1 ATYPICAL KINASE-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43173">
        <property type="entry name" value="ABC1 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="52"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="423" mass="48643" checksum="FE171702727758E0" modified="2025-10-08" version="1">MSKSGKSLPRDWIPSLFCGPRNFDQLRCKDMEEISKVIEENFGRPLDAIFSQFDENPLGSASIGQVHKAVLRESNQTVAVKVLHRDAKGFFRADLATLEKFTKIAQKQLLPFVKQWRKLFEEEFDCRKEAQKMEEIGRNLEHWKRYVKVPRVFSDYCTEEVLVMEYLEGNKLSDSLSDIVRELRRMKDERSELSSYVKTRNRFAAVSSAAAVEKIESAVLTVIELLVKAINRMSFGFFKRNFLEEPHLVRINRLRKLVKTLVEVHGRTLFIDGIYNPDPHGGNVLILEDGKLGLIDYGQAARVDLDFRRKLASLLVAIDRGDWDNVEKYNAEIGFRTEKRSPKILRESARLFFGDGKTGKVAFPQYLESLFKGDPLLDYPADLFMAGKLAIILRGISLCLWGEVSMAHSWRPAAEEFLRKNQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG45</accession>
    <name>A0ABV2AG45_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000397</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000061">
        <property type="protein sequence ID" value="MES1918429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="13376" checksum="612128E92522B983" modified="2025-10-08" version="1">MPIEKSDKNKKSLLQKIFGLYKLDYYKGTDSYFEPYGGLYSDRARELVSNKAQNFTSFDGDRFFWNKEKSKQYFYYFSEYIHCINKYGLENGVCVNKWNRLQNTIPTTIVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG72</accession>
    <name>A0ABV2AG72_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000595</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Mitochondrion matrix</location>
            <location evidence="2">Mitochondrion nucleoid</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000102">
        <property type="protein sequence ID" value="MES1918661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021911">
        <property type="entry name" value="ATAD3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23075:SF0">
        <property type="entry name" value="ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23075">
        <property type="entry name" value="PUTATIVE ATP-ASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12037">
        <property type="entry name" value="ATAD3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="9" id="KW-1135">Mitochondrion nucleoid</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="11">
        <location>
            <begin position="363"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="82"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="600" mass="69789" checksum="87261BCBD2966EC2" modified="2025-10-08" version="1">MLSFFKNGSVSADKEKKPDVDFTHFDPKNVDTTKLTGFDPAFLERGVDALKKIESSPNSKKVLRLLFEQEKTNQMKMQNRILDHQLRKKRDELKEKANYQREVRKSNAHKAELEKELAEKKSELEEERVAKLLKQKQSANEQWMAQQRNHFKEQQEMQRKTDRLRIQQEESLFKKRALHEIDLACAREKSRSQEKAKRERENADLYKSQLIEKSRLKREEMLEVITKKYQLLSLYTDRLFENLSEPRKLNSLILGTSAIFSSFFASKYGLNLLKRYLETRIGKPSLVRETSRRNIREPFRRFNFKNGRKWFYTNAQKFGFFTTRGNFNETKTIFNGIFLNKDVRDRLEWLSRVTLNTNRNNAPFQNILLYGEPGTGKTLFSKSLAINSGMHYAILTGGDFSQLGKSAVTELHKIFDWAERSKRGTLLFIDEADSILRKGRDTSSKMSENMRNVLSAFLYRTGTPSNKFMLVLATNLPAVLDDAILDRIDESIHFPFPALKERTQIFLHNIKKGLSPNVKNKFTLLKTLKGGEKEITEMCKRLAAKSEGFSGRTIQKTVVALQHSLNNGRFGKDKISTEEAEKLMTKFIESCKINFKTSHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGF9</accession>
    <name>A0ABV2AGF9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ROK1</name>
        <name evidence="12" type="ORF">MHBO_000666</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DEAD box helicase family. DDX52/ROK1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000118">
        <property type="protein sequence ID" value="MES1918751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050079">
        <property type="entry name" value="DEAD_box_RNA_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE RHLE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959:SF15">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 9 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="10">
        <location>
            <begin position="110"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="11">
        <location>
            <begin position="305"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="500" mass="56639" checksum="C593C20464E8C225" modified="2025-10-08" version="1">MSNTLKKEMNKLTPKNPLDFFGLKAKSKPASDFDHKTKPLLPNETNKISDNKIVDDTFFNSQKSKIKLKGTDLVPKISRFEDLSKLNSQILQNVKICNFEKPTIIQSFSIPFLLKKRDLFGIASTGSGKTAAFLMPMLHFVAKYKAKNKCFRGLIITPTRELALQIQSDAIRFSKETGINISLADSANSENGSENFGDVDVIVSTPFALSKCAGKSKFFKSVRFLVLDEADRLLDFTNKFQKQKSQKRESITEQIDKILSFCDNKKLQKCLFSATLPAHVENLARTVLRNPVRLIIGKRDVSTTTVDQKLMFVGKESSKMFALLQILGDVPNFTNQKKLRPVLIFVQSKKRAKMLNDELNQESVRSEFIDSDRSKKMRDDLIKKFNGGELPVLVCTDLVARGIDFVSVALVLNYDFPTTATEYVHRVGRSGRAGKRGKAITFFTNSDRLLLRSIAEIIEQSGGQVPKWILETKRVSRTKRMRLRFKPPKRRKVRAIAKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGQ6</accession>
    <name>A0ABV2AGQ6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Hexose transporter 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">MHBO_000761</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>D-fructose(out) = D-fructose(in)</text>
            <dbReference type="Rhea" id="RHEA:60372"/>
            <dbReference type="ChEBI" id="CHEBI:37721"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="12">
            <dbReference type="Rhea" id="RHEA:60373"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>D-galactose(in) = D-galactose(out)</text>
            <dbReference type="Rhea" id="RHEA:34915"/>
            <dbReference type="ChEBI" id="CHEBI:4139"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="7">
            <dbReference type="Rhea" id="RHEA:34917"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>D-glucosamine(out) = D-glucosamine(in)</text>
            <dbReference type="Rhea" id="RHEA:78423"/>
            <dbReference type="ChEBI" id="CHEBI:58723"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="11">
            <dbReference type="Rhea" id="RHEA:78424"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>D-glucose(out) = D-glucose(in)</text>
            <dbReference type="Rhea" id="RHEA:60376"/>
            <dbReference type="ChEBI" id="CHEBI:4167"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8">
            <dbReference type="Rhea" id="RHEA:60377"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>D-mannose(out) = D-mannose(in)</text>
            <dbReference type="Rhea" id="RHEA:78391"/>
            <dbReference type="ChEBI" id="CHEBI:4208"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="10">
            <dbReference type="Rhea" id="RHEA:78392"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>D-xylose(out) = D-xylose(in)</text>
            <dbReference type="Rhea" id="RHEA:78427"/>
            <dbReference type="ChEBI" id="CHEBI:53455"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="9">
            <dbReference type="Rhea" id="RHEA:78428"/>
        </physiologicalReaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000143">
        <property type="protein sequence ID" value="MES1918866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050360">
        <property type="entry name" value="MFS_Sugar_Transporters"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48022">
        <property type="entry name" value="PLASTIDIC GLUCOSE TRANSPORTER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48022:SF2">
        <property type="entry name" value="PLASTIDIC GLUCOSE TRANSPORTER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="113"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="142"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="169"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="253"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="288"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="321"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="349"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="15">
        <location>
            <begin position="16"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00044637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00044648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00044656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00044662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00044668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00044710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00044780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="MES1918866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="369" mass="40328" checksum="92C964F44AA8DB9B" modified="2025-10-08" version="1">MVLKKFKRIKGITLNGLIIVIICGAIFGYGTGVISNVTSSFLGPNKSNMTLEDTVMTSSVLLGAFFGSLMSGAISDKIGRRNTLLVGAAIAIAGNTICMLAFGNYIVMAIGRFVFGLALGPISSVGPLYLSECVADDMRGFLGTFFQFSITFSIFLGVLWGFGAFKPNFWYIELGFSFLVILVYLLAIPLFVYTFFSPDTPRFLVDRDNEKAKELFMQFMTEEEAMAEMNTIREKRKVKSTWGQLFAKQNSRAIMIGLVLAAAQQLTGINAIIYYFNAVGEIIFQSNTTAIAATFSGIMFWNCVTSMAAIPLTSRYGRRTLLLVGQGIMFISLAITGCAFFFAGAARSVLSILGISLFILGFEISFNFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGS6</accession>
    <name>A0ABV2AGS6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000148">
        <property type="protein sequence ID" value="MES1918885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15776" checksum="85B3E2A5475E5FD7" modified="2025-10-08" version="1">MQLTLFIQQKICLLKMNNLKSSQKNALINHLICHCCNNKYSDLIVSNAISFSKHPACINLSEETDLVMTKYKITRKIEKLVEKENFYRKIKKIVVLFENAVKKHKLNYKCLLSDQILDFKMIVFMLLYLANFNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGT1</accession>
    <name>A0ABV2AGT1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000784</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000149">
        <property type="protein sequence ID" value="MES1918889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="96" mass="11493" checksum="F5AF216375ECCE00" modified="2025-10-08" version="1">MFRKYSNTKIYEKAMWEDLSQFLKKEKCFIDERIGKSGIVFLIKEFAPPPPRIKRIRVLKFELVPEEIQVDEAYNICFGEIIVNFEMENGVCQRNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGX4</accession>
    <name>A0ABV2AGX4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000589</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000101">
        <property type="protein sequence ID" value="MES1918653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050870">
        <property type="entry name" value="FAST_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013584">
        <property type="entry name" value="RAP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21228">
        <property type="entry name" value="FAST LEU-RICH DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21228:SF40">
        <property type="entry name" value="LD45607P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08373">
        <property type="entry name" value="RAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00952">
        <property type="entry name" value="RAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51286">
        <property type="entry name" value="RAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RAP" evidence="1">
        <location>
            <begin position="229"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="414" mass="47438" checksum="0E27765C838F23C3" modified="2025-10-08" version="1">MNYCEELLFKNIASQAVKTIKEFAPQNISNLIWSFGALKIGETELLEKIIDESLKRLEEFNTQNLSNLAWSLAQLVPASRYNDVLFEEVSAVCIIKTEYFNARYFSNLLWAFAVAGFFPEPLVERAIDYMNTAEPSELEDLGAAYKAQWYQVDLTLKLERPVFSRRVSLRKAILTLVSREFLKNEIVSSENSVEVNNILNFLQLDYSSNFILNEGFVVSNMLQPESQRVAVNFLGPHNFLKSSLEMSGESALRGRLLKEIGWKIAVIEHKELERCNNFEQKVRLVADRLLNVGIQIHDQILSPLIDCRQNEMVDFKKSDFFGDDGRLDSLAMGVSGKEEKTGQSILEGIIYKSFVKRYLKIFLYDVEIIKPLGGRFGEGFYFEMVEINLMDNTAGYFLHVSDHSPSFIHPIKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHE6</accession>
    <name>A0ABV2AHE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000963</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000197">
        <property type="protein sequence ID" value="MES1919096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="16701" checksum="6986DC32EFAEBF88" modified="2025-10-08" version="1">MCNIVKQEIIKILILRENALKEKRPRKKVALELYGKKFVFYEINGDMCIECHKNYAMEARQLEIPHNYLMKLHLRQVFGRFKGIRVSSKTKKRYFEFITKQEPFYTEGKYRYRWEVLRSLKGTKKEIVLTRLLYMNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHG3</accession>
    <name>A0ABV2AHG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000622</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000108">
        <property type="protein sequence ID" value="MES1918697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="110" mass="13246" checksum="3DC51D727DF32C2F" modified="2025-10-08" version="1">MDKNKTLKIGKKRLIQYKMEKCLYLCERYIDLTKERNKCKKEILKLLNEIGEQESTSRKSQQNHPHLQENLQKSFDLLDRKIERSVAPKDKKNFLDAILSDLMRYVRTIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHH8</accession>
    <name>A0ABV2AHH8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Importin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000934</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the importin beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000189">
        <property type="protein sequence ID" value="MES1919062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051345">
        <property type="entry name" value="Importin_beta-like_NTR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12363:SF33">
        <property type="entry name" value="IMPORTIN-13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12363">
        <property type="entry name" value="TRANSPORTIN 3 AND IMPORTIN 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03810">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="5">
        <location>
            <begin position="24"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="415" mass="48013" checksum="9B51A7B531CA49CE" modified="2025-10-08" version="1">MEREVVENILLFYNTNSNDERKKAEEILNTFKNSEKSWQICCSLLNQEIPQISGKDSNSIHLFIATTLSNKIKFHSNDLKAESKKKIKDFLLEKILNFDQQKSDTILRQLCTALANFVVVSSEWTNSIPFLATFFSERNPKILLKILTYVVEEYNSLKQRHRFVISKEKLAQFEDNCLNKIANDIIKLFDQLLEKNKDDIKSELPRCIAVWLDVIDPFHFSSNTLCESKTVEFLMESLFQNTQNFDVLIDALTSVFCYMNEEKYKKNVNFFKKLVVFIGKIKTDIIDVLASKTEIDFEVGSKCEKISNLIQIICSSVTDLILELEPNSLAILRISIELLDIKHRPSNCIIAGYLITFFEELDSVYKSCDDSSQKAVLENIIIETVKKLVQKSCVSENDVEDEENDFSEFRLNVKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHK6</accession>
    <name>A0ABV2AHK6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Holocytochrome c-type synthase</fullName>
            <ecNumber evidence="10">4.4.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000959</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Lyase that catalyzes the covalent linking of the heme group to the cytochrome C apoprotein to produce the mature functional cytochrome.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>holo-[cytochrome c] = apo-[cytochrome c] + heme b</text>
            <dbReference type="Rhea" id="RHEA:22648"/>
            <dbReference type="Rhea" id="RHEA-COMP:10725"/>
            <dbReference type="Rhea" id="RHEA-COMP:10726"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="ChEBI" id="CHEBI:83739"/>
            <dbReference type="EC" id="4.4.1.17"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the cytochrome c-type heme lyase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.17" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010000197">
        <property type="protein sequence ID" value="MES1919092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000511">
        <property type="entry name" value="Holocyt_c/c1_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12743">
        <property type="entry name" value="CYTOCHROME C1 HEME LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12743:SF8">
        <property type="entry name" value="PROTEIN HRI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01265">
        <property type="entry name" value="Cyto_heme_lyase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00822">
        <property type="entry name" value="CYTO_HEME_LYASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 10" id="KW-0349">Heme</keyword>
    <keyword evidence="6 10" id="KW-0408">Iron</keyword>
    <keyword evidence="9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5 10" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19602" checksum="E8DB1F8228518F1B" modified="2025-10-08" version="1">MHESSNIVEKQGWRHPSKIPAGGNGNSPNGQNWVNPTDEQLMRACRRKGKKLDHSDKSMVAAIHGEVLEKTWRAIMEYENLHIGCIQPTLSRFEGKSEVLSPKAKFYSKPFDRHDWVVDRCGKEVRYIIDYYGGDFNPSSPFNGKLIVDCRPALTLGGVFDRLHLNFKKAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHM6</accession>
    <name>A0ABV2AHM6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001052</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000221">
        <property type="protein sequence ID" value="MES1919189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9091" checksum="01B4041017F2511D" modified="2025-10-08" version="1">MSEESKNSLVFKEKISGEDIIDNSSRYKKNSVLFDKKFGASTNDVDDRPSTRKHILNIFNATANYVNSIIGGHIFDPKLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHU3</accession>
    <name>A0ABV2AHU3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001122</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000242">
        <property type="protein sequence ID" value="MES1919263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="entry name" value="Creatinase/prolidase N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050422">
        <property type="entry name" value="X-Pro_aminopeptidase_P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763">
        <property type="entry name" value="XAA-PRO AMINOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763:SF6">
        <property type="entry name" value="XAA-PRO AMINOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16189">
        <property type="entry name" value="Creatinase_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19312" checksum="120C1F140DBDB9EF" modified="2025-10-08" version="1">MKSLVSHFTSQLANIKGLLNLRGNDIEFNPVFISYCIVSSSKTTLFVDPEKLDEKTKQYLQTELEIEIKNYEDIEKELRSVGEIARTKKLKISVSPDQCNQALCAILSGIDSNLIFEQRSPVELSKAVKNDVEIDGMINSHIRDGAAKVVFAISTDCLDGVAGRSNGRKGFEID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIE0</accession>
    <name>A0ABV2AIE0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001275</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000291">
        <property type="protein sequence ID" value="MES1919441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="entry name" value="lambda repressor-like DNA-binding domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10245:SF15">
        <property type="entry name" value="ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10245">
        <property type="entry name" value="ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="lambda repressor-like DNA-binding domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="3">
        <location>
            <begin position="77"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="12"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15526" checksum="2874156ADB8F0813" modified="2025-10-08" version="1">MSGITQDWNVVKLRKSKQPKKATLKEAERKNQVYQVKKANAGGQRKLENTNMKALKDEEDINNFKHNTISHSFKVALQKARMQNKMSQTELAQKANLKPAIVNSYESGKAIPNPQIIAKFERILKVKLPRNKKANN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIG7</accession>
    <name>A0ABV2AIG7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">MutS protein msh4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">MSH4_1</name>
        <name evidence="6" type="ORF">MHBO_001285</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA mismatch repair MutS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000293">
        <property type="protein sequence ID" value="MES1919455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361:SF21">
        <property type="entry name" value="MUTS PROTEIN HOMOLOG 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair proteins mutS family" evidence="5">
        <location>
            <begin position="62"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="28091" checksum="C67A21A2F0711ACB" modified="2025-10-08" version="1">MLVSNIIEKTSFALLALHRPNYKRPKFSEDGVVSIRQGRHPVIEVLSIEQFVPNDFFQSDNFNFHLITGPNASGKSTYLKQICVLAIMAHIGSFVPAENASFRIIDSILTRFPNVESLSENKSTFFKEMSEAANILNNANDNSLIVIDELGRATSSTDGTSVAWASAEKVSIANKSWPKNVATSCFRPIFSSCASWLPFIRTSEIKCSTSKSMKTDSNIRSKLWKTKIRQKSRRKRSGTASTSLKSLVFRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIP5</accession>
    <name>A0ABV2AIP5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001358</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000322">
        <property type="protein sequence ID" value="MES1919546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="212" mass="25029" checksum="9FFA1C1494BAA2EC" modified="2025-10-08" version="1">MEETELKYIKNSNDDKNFKNLSREEKCVKILKEMKSELVKLKDGRTKKVEDGYKTLKFAKKLMKKFKKEIKRCVDDYTKFVFCIDFLKHVAKKNLKYSFCVLNCEDGNSILMTFDASSDIYCFEEDLSVIDSDPLDGLHDMILKLSETFDSFLFGEILNKLMCCVDYFIEVAQKSGFKENKNQNDHCDVKCGYTNEWMFCEMTGNDRYHIFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIU5</accession>
    <name>A0ABV2AIU5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001381</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PRORSD1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000329">
        <property type="protein sequence ID" value="MES1919573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.960.10">
        <property type="entry name" value="YbaK/aminoacyl-tRNA synthetase-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040285">
        <property type="entry name" value="ProX/PRXD1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036754">
        <property type="entry name" value="YbaK/aa-tRNA-synt-asso_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007214">
        <property type="entry name" value="YbaK/aa-tRNA-synth-assoc-dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31423:SF3">
        <property type="entry name" value="PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31423">
        <property type="entry name" value="YBAK DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04073">
        <property type="entry name" value="tRNA_edit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55826">
        <property type="entry name" value="YbaK/ProRS associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YbaK/aminoacyl-tRNA synthetase-associated" evidence="2">
        <location>
            <begin position="28"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20167" checksum="7404B649BF784142" modified="2025-10-08" version="1">MDPSKKTNSEALLKKLENLKISFNLVNHEPVTSCKEHSDALNNTNLAFCKNLLILNKKSKKLSLLVLPAASNFSFKQIGSVLGVNGNHLRLANDALLEETLKVARGALNPFSVMFDSDDRVELIIDKPIAKEKRLLAIHPMHNDASILVKFGDLKTFLEDLKFFCKRKQTVHRNLFWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX2</accession>
    <name>A0ABV2AIX2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001423</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000345">
        <property type="protein sequence ID" value="MES1919625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="108"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="10"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="137" mass="15357" checksum="8FCC0E7CF588C1C8" modified="2025-10-08" version="1">MESVSSSTARNHDTVHFTNEEDGPASFAKELGFLDENISRLKTTLNSAISLISDFVKQKAESADGVVKMTELVSNKTTPSFEGRIDFRPILEKQKRDRKRTLKALEPLSISLSALTSLENELKETERQFANLENVQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIX5</accession>
    <name>A0ABV2AIX5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GPI mannosyltransferase 1</fullName>
            <ecNumber evidence="11">2.4.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">GPI mannosyltransferase I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">GPI14</name>
        <name evidence="12" type="ORF">MHBO_001247</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalytic subunit of the glycosylphosphatidylinositol-mannosyltransferase I complex which catalyzes the transfer of the first mannose, via an alpha-1,4 bond from a dolichol-phosphate-mannose (Dol-P-Man) to the glucosaminyl acyl phosphatidylinositol (GlcN-(acyl)PI) intermediate to generate alpha-D-Man-(1-&gt;4)-alpha-D-GlcN-(1-&gt;6)-(1-radyl,2-acyl-sn-glycero-3-phospho)-2-acyl-inositol and participates in the sixth step of the glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Endoplasmic reticulum membrane</location>
            <topology evidence="1 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the PIGM family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="11"/>
    <dbReference type="EMBL" id="JBDODL010000281">
        <property type="protein sequence ID" value="MES1919409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007704">
        <property type="entry name" value="PIG-M"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12886:SF0">
        <property type="entry name" value="GPI MANNOSYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12886">
        <property type="entry name" value="PIG-M MANNOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05007">
        <property type="entry name" value="Mannosyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5 11 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4 11" id="KW-0337">GPI-anchor biosynthesis</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="142"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="209"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU365064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="242" mass="28730" checksum="9CFA9CB16AF262BB" modified="2025-10-08" version="1">MIDQILQNRFFVAGLTLGLSIHLRIYPVIFVFSIFLYILRRKQKNAFLPLFKFFAAVSISFVSLFILCYNLYQNDFFENSYLYHLKRIDLKHNFSIYFYYFYLFSQNSSNFVKILKFVPFIVQTALIFAISLKFYANLFQSLFFLSFCFVTFNKVYTAQYLSWYYCLMPLAINRMTITEMICIVGLSTVAQVNWIYWSEMLEGQGEQVFLQLFFGCVLMFLANLAILVYSICHFKDGKVKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ01</accession>
    <name>A0ABV2AJ01_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001273</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000290">
        <property type="protein sequence ID" value="MES1919439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029675">
        <property type="entry name" value="PGAP4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31410:SF1">
        <property type="entry name" value="POST-GPI ATTACHMENT TO PROTEINS FACTOR 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31410">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26554" checksum="9AB9968F10D7AD0F" modified="2025-10-08" version="1">MKICSETKSSHSLVLQDDILVARNLFLFLSRHFHPFSKDCDDWLWIKLFNSEQFFGYSINEIFNIASFCVLLSSVSVFAMYMVTFGSSSSFFSRKSILLQFSLFAIFLTMIFASNAHRRLSKFEQFYATGAGVYKFESHLTAVANLYQTEKMASISRYIVNMAIVSDRNVPVDRAIKWYGSKRNLKEYVFFPSVVQHIGMVSSNPRNRYNGSSNYIRSRSYDLVFGNGLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ26</accession>
    <name>A0ABV2AJ26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000367">
        <property type="protein sequence ID" value="MES1919690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="518" mass="61184" checksum="00476E1C04B6DDB7" modified="2025-10-08" version="1">MAKPKKDFCYFDQYHPQCILSPKNRENEETLKPSFDGDIVLKEDIVESENSFVASDQPLNIEKTQNPDLIYSICVISTALFFLLLFARILIKMAKKIKKKDFQMLIKMEDDQIVYGLKSQIDNLNKMKESQNRQNYLYSKKKILKTMDILGEKKLFRKLLATNKKLTKLKKNVFSKRLILEINFEEIAQIKEKISKIAMKFAKLQKSEISKFLFVFKEEHKLIANHILAINLIFKMIVAINNPLNEINSKLLAKSVSEFGKFCKKDLLSKNELFVLNQAITINKNCHQILKFGQNTNWKFDQNGELDQNVSVESQSCLLKSDFEINKIRNESQNLMRQLNNSKFAIDNGKDFSNEEFDHFEENADIMQKEKKVTNWKIHKNKINSNLLINAMKIMANREIELLKLREMQIQRRETILMKMKQHEEKMLNFRKMEKLALANLKRNLKNDRFFKQKHENETKLVLEERNKNLKEIEMSFLKKSLCFQMGIHCCSVLKIFLTNFVFGTCRIFKICPFYPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ54</accession>
    <name>A0ABV2AJ54_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nascent polypeptide-associated complex subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">BTF3L4</name>
        <name evidence="4" type="ORF">MHBO_001493</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Part of the nascent polypeptide-associated complex (NAC).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAC-beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000376">
        <property type="protein sequence ID" value="MES1919711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.30">
        <property type="entry name" value="Nascent polypeptide-associated complex domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038187">
        <property type="entry name" value="NAC_A/B_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002715">
        <property type="entry name" value="Nas_poly-pep-assoc_cplx_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01849">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01407">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51151">
        <property type="entry name" value="NAC_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC-A/B" evidence="3">
        <location>
            <begin position="40"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="145"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="147"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="220"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU361272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="244" mass="28296" checksum="A1E359C813311838" modified="2025-10-08" version="1">MTVDPKVMEERIAKRFGNKAVQTRGRGAVRQNAKKRVNKKVEEQKLNALLEKNHLNNKIEDIPSVTFIKDDDTVVTFEKPVVKATIQSKIFAITGKQINSTIEEMMPGIHKKLDAETRKRFPLKEEDIKSIGEFPDLVEDFEAISNQKDENDKKSSDQIEKNDEKVKIEQIDEKAKNNEKKDEKDENNEKKEEKAKNNEKKDEKVKNNEKKDEKAKNNDEELSVSEYDSEESSQYSYSDEEESE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE3</accession>
    <name>A0ABV2AJE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001528</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000389">
        <property type="protein sequence ID" value="MES1919752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055275">
        <property type="entry name" value="Ferredox_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48467">
        <property type="entry name" value="GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48467:SF1">
        <property type="entry name" value="GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="15500" checksum="DB296F581D1CE28F" modified="2025-10-08" version="1" fragment="single">GIVIKCIGYKSVPVPGVSFDEQKNIVPNINGKVANSKKLYVSGWLKNGPRGAIADSLFDAEQTVTTIEWDYINSNDTANQKNSLEKLTKSLLEKNVKFIDKNGWKRVNEEEIKRGKLRGVEREKIINLSEILKIAKVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJE7</accession>
    <name>A0ABV2AJE7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RNA methyltransferase</fullName>
            <ecNumber evidence="6">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_005297</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000400">
        <property type="protein sequence ID" value="MES1919789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039772">
        <property type="entry name" value="Bin3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010675">
        <property type="entry name" value="Bin3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024160">
        <property type="entry name" value="BIN3_SAM-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12315:SF0">
        <property type="entry name" value="7SK SNRNA METHYLPHOSPHATE CAPPING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12315">
        <property type="entry name" value="BICOID-INTERACTING PROTEIN RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06859">
        <property type="entry name" value="Bin3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51515">
        <property type="entry name" value="BIN3_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Bin3-type SAM" evidence="7">
        <location>
            <begin position="59"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="252" mass="29530" checksum="4B134CE02CB6463B" modified="2025-10-08" version="1">MYEFEPIIKKNKRKKILNLQQHSADSKKELKKATKIKKLKNFLYGNHSNYYNKGYRDDDPRLSMLNKKYFENKSVLDVGCHCGAFTLRFSRKFLPLSVHGVDIDSDLISKANLALENEKKIYENKKEYPFNVKFSSCDFVADFKNEENFFDVVLCLSVTKWVHFNSGDDGIKILFQKIANFLKKGGILILEPQKWKTYRKKLHKVSIKLRPSKFEDYLESIGFKLIEKLVPTNSGNSFAKRNIEIYRFVGNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJI1</accession>
    <name>A0ABV2AJI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001578</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000408">
        <property type="protein sequence ID" value="MES1919813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1490">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57997">
        <property type="entry name" value="Tropomyosin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="22"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="110"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="369"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="486"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="486" mass="55475" checksum="AE8750E412BD3C9D" modified="2025-10-08" version="1" fragment="single">MEIVKGIHTAKAAESLNVMVQNKKLIADLERIESTLRTTQTELSESRRDYADQRDKFSDQQVNNAKVVSQWTSELEALRTEKKPLSDEIGELQSTCNNKDCELTTVRAELSEYKEKCGAADEKVKQLIADLRNASGYKNLYEESTSGFNTLRDNYNALAIELEAAKENVRNKADDLKKSRESSARLNSTLNTTKTELEGARTELENIRNRSLQLNSELDAAKKCKKRDDTELQKCRKSLQESDSSLDKSRRNVNKLNDDLRTVKQNLEDEREKCKTITATVNTLRSELERVKENYGIVNENLSQSRFKSSEVESQLASIRRELESNKNELQTTKTKLSTATGTVRNMEDKLRQTVAESTETSKMAQSTMTNNEQRITLLESNLKEAAELNKRLEYSNGEMLGQIQNLEKQIDILRNEKKKCEEDITRLNNALNKQASDHRAKCDELQSQCESQLVALRESVNTLKQENVRRDDQLRKSGETVSKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJQ3</accession>
    <name>A0ABV2AJQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000434">
        <property type="protein sequence ID" value="MES1919888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16276" checksum="C5C0C52F5E1BD804" modified="2025-10-08" version="1">MEKVLHAKVQDLPIESKSIFKPTKPKSYTFKGVTKFITPRSESLIEIKPGTPFLIEWTNRKTLERGWKGDLPIALKRLLQKLPPKECVQGIPVSSAILMNKIINCRLSVDGQNIGLASKKMKTVYLNEEAGIGGDLFSQRRVGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK42</accession>
    <name>A0ABV2AK42_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000471">
        <property type="protein sequence ID" value="MES1919992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21424" checksum="BEE7364E208D6B8B" modified="2025-10-08" version="1">MAILRPGENLIFCRDPLKWISFGKFLRESSVLNCFYPNKIDPPFLECEKIENSCSLSNLKVRKIKIMAKINKNEEVFESIGVNLNDYQILQNLNSVLIRCANSNEIEVMCKNGSFYEKNGKLIELNQFCESGDNNVLLLENENYENPKFNYEISSENKIVFSKELSFSGAIHEGFALLGYLILLCAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK81</accession>
    <name>A0ABV2AK81_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001550</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000397">
        <property type="protein sequence ID" value="MES1919778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="3">
        <location>
            <begin position="4"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="1">
        <location>
            <begin position="4"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="56"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="63"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="77"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="101"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21847" checksum="36FA757ADF37416C" modified="2025-10-08" version="1">MSDRCTFSEEKYCKNGSSCPFIHSIQSEFFFSKMAKIDLNASDFLLSQNDPYMDIEPLERSKSSRRRQRKKGIPPYDEYRHLYSERKLEQKSLNDFSTEEPNERNDKDNAHDAQRDILGLLEENTWAPQNKSPKIGKNKNRTKMKKVAKWECVTCKAKEKIPWSKKNCPNCFCLRPDLLQERVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB2</accession>
    <name>A0ABV2AKB2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Zinc-finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001833</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000518">
        <property type="protein sequence ID" value="MES1920117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="192" mass="22208" checksum="92490E68E71B7254" modified="2025-10-08" version="1">MKKDLETILPGSRSPRKKNLTCHFCEHPSHRYGRKSTSMQITCQLSNCYRVYCSTKGCVTKLIKYFPSYKCFWNIKTAINEKKLKFICPHCIDPKICTGRQCAKKNKAKKVFLGIKNVFWEKNGNGRNLNTKADAVSKQTNNVKDQIENKTVRKKNFELIYSAVDTKMKKNTQFRSLPKNVLDSIRPPASNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB3</accession>
    <name>A0ABV2AKB3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001837</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000520">
        <property type="protein sequence ID" value="MES1920121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="56"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="170"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="251" mass="29056" checksum="4B021047FEB31E09" modified="2025-10-08" version="1" fragment="single">MAISKKKQRHSSKSDFSEQTDSETSDNLNFKEEPLFNQLKRKSIGKSKIDHSKTKGILSLIALVVIIVLVSSITSIMISRYSSSFSFVEDVSEVVNDLKGDLKKEREIFMKKGINFDERIQKSLGTFLNRFQENFAEKTFVVDNLDLVKNTFTKNKNEQDKINKKNHLLNKEMVEKMEKQKTEIDLFKENFKKVEKELRNVGTKVESQNLVNLEKRIAAIESKLSKMGKSEFGDDVQFVTRRDFDKVLKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKB5</accession>
    <name>A0ABV2AKB5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001826</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000516">
        <property type="protein sequence ID" value="MES1920110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14558" checksum="F6557D897B52A727" modified="2025-10-08" version="1">MSLIYGIVTDDSLNDFSLVNLMFGRKIFRSDPKCFNERDPFLKIGYCKAYDAIYLAFNVNDVLIDSFNVTNNEENFLRHLIFMFVSCDHISIISSKSQIDRRFIELLFSVQKTVRQFDSVFKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKK7</accession>
    <name>A0ABV2AKK7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosomal protein L1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001892</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000546">
        <property type="protein sequence ID" value="MES1920195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00403">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023674">
        <property type="entry name" value="Ribosomal_uL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028364">
        <property type="entry name" value="Ribosomal_uL1/biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016095">
        <property type="entry name" value="Ribosomal_uL1_3-a/b-sand"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00687">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56808">
        <property type="entry name" value="Ribosomal protein L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="265" mass="30166" checksum="B3FE4FE13EE2FD72" modified="2025-10-08" version="1">MVDTGTGIVNKISEDTLEKAIESLLSLETTKTKIDYIYVQIELQKINYKGRFYPFAIPVKHPLTSMDKLKITVIAGDPPKLEKQVKSTAFSKIKILSLNNLKENYYTLKQKRDLRRETNLFLADRKVLNRLPKLLGSTFIKQKKMPLPIKIGSEKAVEKIENAKNSTLLYLSGSSCCQIKVAKTDFQTLQIKENTKKVLTFLENGKIGKILSICLKTTESISLPLFSQLPETDENDAPTFQIRKISKIDNIINDFKENGDNFIFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKT8</accession>
    <name>A0ABV2AKT8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">60S ribosomal protein L32</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">RPL32</name>
        <name evidence="4" type="ORF">MHBO_001938</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000569">
        <property type="protein sequence ID" value="MES1920247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001515">
        <property type="entry name" value="Ribosomal_eL32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036351">
        <property type="entry name" value="Ribosomal_eL32_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23413">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23413:SF1">
        <property type="entry name" value="RIBOSOMAL PROTEIN L32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01655">
        <property type="entry name" value="Ribosomal_L32e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01393">
        <property type="entry name" value="Ribosomal_L32e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52042">
        <property type="entry name" value="Ribosomal protein L32e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9211" checksum="7CE99406873B26C7" modified="2025-10-08" version="1">MPNVGYGNNKKGKHVLPNGYKKFLVRNEADLDAMLMHKNDYCAEIAHNLSSKKRKVILVKAEEMEIKVTNPNARVVTEEVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL20</accession>
    <name>A0ABV2AL20_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001873</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the THOC5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000536">
        <property type="protein sequence ID" value="MES1920169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019163">
        <property type="entry name" value="THO_Thoc5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13375">
        <property type="entry name" value="FMS INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13375:SF3">
        <property type="entry name" value="THO COMPLEX SUBUNIT 5 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09766">
        <property type="entry name" value="FmiP_Thoc5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="437" mass="50151" checksum="78E275BBD87D293C" modified="2025-10-08" version="1" fragment="single">SIDEHELRLAKLKALQYSMEKIESKIKSASELVSNSENGKRKRNFADELEQTAKLITELKSLASEKKKLKIMCTEQYRKNKKSENFSKSLFENLSKLKNACDSVTNSIGLPININLKLEEATLELPYPLFSLYHSVTGHKVGIAKIVRNKEARDPKLNRFSLEINPFDLKSIALVFYVNGDSSRCGVKAVGFDPRLLQGIFPDDAGTRMDATNKDIIEYDWSRVLCGFGLPQTAETQRWTDFNVAKLLQVLSARLNSFVSVEKQIEQLNDSKIPGLDLNVKKLVKTLAEKQNIISPFLELTATIASEELTVNLNIKIFADYPQRIPVYGIRLFEERGMVRYANPLRDFVSEKEFEVRKNRNFEKQLLKELYREGTKERERDLCFQKQIEAAVKFVQSHIAAVKSEDVHKKRKFFNDSKPKIFEGKERFVVIGRSVNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL74</accession>
    <name>A0ABV2AL74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002089</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000661">
        <property type="protein sequence ID" value="MES1920421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16209" checksum="F2D11B52A46F64D4" modified="2025-10-08" version="1">MNLLERVVRIDESRSNINNMNDNNDESSRDGQNAKKGNLTIENKLSNLFEKIDKRENINDLNYFENTLTTGEDGKITIALLKKISENGTLGIYKENETVLQNLKIVLKTIDLDKLIKLGFLKNGFDFEENLFDLLEDLQID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL78</accession>
    <name>A0ABV2AL78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000561">
        <property type="protein sequence ID" value="MES1920229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58113">
        <property type="entry name" value="Apolipoprotein A-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="127"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="243"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="337" mass="39164" checksum="A2B2EE5E1121BA73" modified="2025-10-08" version="1" fragment="single">KNLETAENKLEKSEKTLKLSEKDSSRKSGLLNSFQKNEKLLLNENNRLERLSTSLYDDNDLLFSKIVESEKTDTINKTKTNSLAKYIFGILSQSSSIRKSFSAESKKWVVDLKKIAGTFKIDSFNDILKLEKDVKEIENNLITEKNLLNDKTKSILINSENNLKNVKKQFSDFSKALLGNGEKSVERLITIAKNDFSILLKNIKTWNSKIILKMEENVENIENHKKIFSDFCQENNNFLINLAKKFDERQNQIEKGIEKLQKEIKEKTGAENENQKKRFYQIVENIKNSINNLNEERFKFNQNLAFSVNEDLQNLSNYNESNSKTISEIIKKLDKKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL89</accession>
    <name>A0ABV2AL89_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001936</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000568">
        <property type="protein sequence ID" value="MES1920244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="233" mass="27365" checksum="1A35B2AE3EBA0ACD" modified="2025-10-08" version="1">MGTRDIRLNTVHFDECTGTALPGFFPASIYLEFPEDWYVESMYKLSLHDITYENTLCHIETTREQRDHLSKLEHPEETKCHHHVARVSIGRFGEKEKCRGHIHTENVYAINSRILKVNRFHCDGNEEQCHHLLEAAFFVGKRGKHSAFLKPIVHGYCPGFHLPQFQYSFTIFLEVPEHWSTDTLSSLLLWDFNTKKILCRIKLDDSTRRLVSLLPKAEKSKCRWEHSELQEEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALH2</accession>
    <name>A0ABV2ALH2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002198</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000725">
        <property type="protein sequence ID" value="MES1920535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013041">
        <property type="entry name" value="Clathrin_app_Ig-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013037">
        <property type="entry name" value="Clathrin_b-adaptin_app_Ig-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49348">
        <property type="entry name" value="Clathrin adaptor appendage domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="152" mass="17160" checksum="29BCC9C7AA8566E7" modified="2025-10-08" version="1">MTDLTDLVGTENEIFAAAAKTFKFKEMVKGDKGEGLQIFAKLKVHKAKKIFVFKFKNISKITLEKIYLTFDKNFLGLVPAKDFELKDELRPGSEQQIEMVVKKNFGDGIDENRDGNGDGDKSVQIGLKTDLSPSIKYFKFPFDDAEIEALIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALI1</accession>
    <name>A0ABV2ALI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000720">
        <property type="protein sequence ID" value="MES1920526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20569" checksum="8FFEA64F67BF14F8" modified="2025-10-08" version="1">MKIFLSLIFFHLYRNSDKILDIPCHITGADDFSFVDTVSQKDLGNVEYFPDGSSVFLQCKNNNPLFNITSNTVQGYMYIRCESGRVYNEWNVRLNNTKKDLLCEDFDGFKSCKKPELGGMEISSVDSVFNFPSNTKYEIWCEDSDMGFLLQCVGSDWVIVHGEDIYKGEDEIKILCDKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT2</accession>
    <name>A0ABV2ALT2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">tRNA-dihydrouridine(20) synthase [NAD(P)+]-like protein</fullName>
            <ecNumber evidence="1">1.3.1.91</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">DUS2</name>
        <name evidence="1" type="ORF">MHBO_002040</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.91" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000630">
        <property type="protein sequence ID" value="MES1920363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102264">
        <property type="term" value="F:tRNA-dihydrouridine20 synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052582">
        <property type="entry name" value="tRNA-DUS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45936">
        <property type="entry name" value="TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45936:SF1">
        <property type="entry name" value="TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="121" mass="13896" checksum="1CE0C485E9EFDADA" modified="2025-10-08" version="1">MIARGALWNPSVFDKNGFSPLSDVVPMYARIAMLSNHRWSYTKYCLTTMLKGSKINCESFKLLLSAKSLDDLEPFLVELEKEALSSKTGYDWKKGCKGVKTSFFYLDSLNKKIKYEDLKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT5</accession>
    <name>A0ABV2ALT5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001959</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000579">
        <property type="protein sequence ID" value="MES1920272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006461">
        <property type="entry name" value="PLAC_motif_containing"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01571">
        <property type="entry name" value="A_thal_Cys_rich"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15907">
        <property type="entry name" value="DUF614 FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04749">
        <property type="entry name" value="PLAC8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14341" checksum="2D6C55DA506803FB" modified="2025-10-08" version="1" fragment="single">MVMSSGLDEELSLVQRMSRDSVDHRSIWNNKICHCCSFKTVAYGLLCPCIAQGDIHSKIRNDKDRILFTLVYCLANGSYLNICCCVYLRSEFRGYYSIEGDLLNDCLVSTFCPCCTVIQMLDEIKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALU4</accession>
    <name>A0ABV2ALU4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002252</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000756">
        <property type="protein sequence ID" value="MES1920600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="30"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9025" checksum="7DCDA80DE647FB30" modified="2025-10-08" version="1">MGCPGEPGRPGMSGRPGAPGPCGPPGPAGAPGIPGSSGSSRMRDRYDDFEYGGDYDYGMDYDYGKKHHGYGKHYYDDYSDCDKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALZ9</accession>
    <name>A0ABV2ALZ9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002091</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000662">
        <property type="protein sequence ID" value="MES1920423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050611">
        <property type="entry name" value="ABCF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211:SF134">
        <property type="entry name" value="ABC TRANSPORTER DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211">
        <property type="entry name" value="ATP-BINDING TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ABC transporter" evidence="2">
        <location>
            <begin position="3"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11706" checksum="560E29CCEBA87A9E" modified="2025-10-08" version="1">MALLSGGQKSRVAFAVMTFQSPHLIVMDEPTNHLDIETIEALLNAIEEYKGGIIVISHDTHFLSKVANDFWSLTPEKIVRFRDFDEAKKHALQKRIDEILSLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM26</accession>
    <name>A0ABV2AM26_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Tetratricopeptide repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002354</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000818">
        <property type="protein sequence ID" value="MES1920710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45641:SF19">
        <property type="entry name" value="NEPHROCYSTIN-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45641">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="35"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="187"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="400"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="485" mass="57274" checksum="4081BF4CFB23DF3C" modified="2025-10-08" version="1" fragment="single">FRHCEMRDFIKLKNEFELFNKTQANLSNSAKIHFSAVANNLGKYHFDKKEFEEAIVYYLKELKLSEELKETASKGMAQNRLALCYGQISKYSIAEKYLKKFSRTASIMQNPIFAYQSILNKGYLFFWRATREDINEFYVKKLLGKAKLCFENSLKMFQRVKVGMAHCFDDGKEYRSVTLKDLKDLKTVIFYSIGLVHFENEDFDSAIQFYKKALNIWRKNDMNTQFSYLLSGLGLAYKNNGNEDLAEQYLKMDNELNSRDNYLNDNANSLHNLANFYLDTRQFTLSRKISIKLLKWAKSKKDQNTIKSATNLFEKSENFINLSNFKIPSLKKQIESPNLSLKSKFSLFYKIGKCYRDLSNWEESIYFFERSCECTKFSKILKEKINFENLNDLENLIAFAEIQSEIGSNRMALKQFSKAILHFRKAIFIKENLQKFAKAKFFDEMTFDFLNLARCLYEEKEETFVVLDMYKKSEKFARKVGEKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM45</accession>
    <name>A0ABV2AM45_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rab GDP dissociation inhibitor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the Rab GDI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000717">
        <property type="protein sequence ID" value="MES1920519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.405.10">
        <property type="entry name" value="Guanine Nucleotide Dissociation Inhibitor, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018203">
        <property type="entry name" value="GDP_dissociation_inhibitor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000806">
        <property type="entry name" value="RabGDI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787:SF8">
        <property type="entry name" value="RAB GDP DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787">
        <property type="entry name" value="RAB GDP-DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00996">
        <property type="entry name" value="GDI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00892">
        <property type="entry name" value="RABGDI"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00891">
        <property type="entry name" value="RABGDIREP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU363124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="227" mass="25998" checksum="232B5402ABDD34CF" modified="2025-10-08" version="1">MDEKYDIIILGTGLKECILSGLLSADGKKVLHLDKNDYYGGDSASLNIEELYNRYKQNETPKSELIENNKKYIIDLCPKFLMACGNLVKTLVHTKVTRYLDFKTVEGSYVFKDGSLFKMPATPTEALSSSLMGFFQKRKLRNFLNFADSVKEEDPKSQKDLKSTMRETFEHFGLDENSIVSIGHALALYKDDSYLDDPKERFPFLEAIKLYAYSVQRYGVSPFIYPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM83</accession>
    <name>A0ABV2AM83_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serpentine receptor class gamma</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002408</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000855">
        <property type="protein sequence ID" value="MES1920770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="193" mass="22196" checksum="789F971B66F1CFB7" modified="2025-10-08" version="1">MSIFVSTISLFSLSLSIASICYSILALFNLFRTKRSFKTEKFVFYIVLSISSVIFNYRLQTLFIAKQLYTLRTFNLNTPVISTTVCKIMSFASNIVPLSLTSLLCLLEMNAIEWISYQSFTKRDIKEKVLNKIRFALIALFLVIFVFNNIFQFCDILFSKIDPFYPKNEFCSTSFPNFVVLQIANGAFLAEFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AME2</accession>
    <name>A0ABV2AME2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Adenosine kinase</fullName>
            <shortName evidence="10">AK</shortName>
            <ecNumber evidence="4 10">2.7.1.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Adenosine 5'-phosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002476</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>adenosine + ATP = AMP + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:20824"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Purine metabolism; AMP biosynthesis via salvage pathway; AMP from adenosine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the carbohydrate kinase PfkB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.20" evidence="4 10"/>
    <dbReference type="EMBL" id="JBDODL010000908">
        <property type="protein sequence ID" value="MES1920852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001805">
        <property type="entry name" value="Adenokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45769">
        <property type="entry name" value="ADENOSINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45769:SF3">
        <property type="entry name" value="ADENOSINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00989">
        <property type="entry name" value="ADENOKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="Ribokinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 10" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Carbohydrate kinase PfkB" evidence="11">
        <location>
            <begin position="2"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU368116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="16142" checksum="C9C7270537C5FC24" modified="2025-10-08" version="1">MFPGGAALNTIRVCQWILKSSHPKCTGYIGCKGKDETGSIFQSYSEKDGVRVECVVDPDKPTGVCGVSIYQKERTLVTLLGAGNSFKEEHLDNKGILDLYKNADFVYITGYFICTSIQSIRKVAKYFDRNNKVFSGKYSKRKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG0</accession>
    <name>A0ABV2AMG0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000907">
        <property type="protein sequence ID" value="MES1920851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20468" checksum="66F737F8AEC4B45C" modified="2025-10-08" version="1">MNIVLMPGYIRTLGEIQKFSDHRTKMAALELSLRIPYKFSCNQHFVLRFIETIIEAFQTKNDLLIKLSLDALEAKDAKSNIEILLDYMEVNQKHGLAGIFMREICSSIRSKNMAICKRMIRILGKIGGKNRKFLDGFLNLEGEENLFVTNGWVSAVTTTSTISNSIKFSTDQIYLMACGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMG3</accession>
    <name>A0ABV2AMG3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Viral A-type inclusion protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002292</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000783">
        <property type="protein sequence ID" value="MES1920639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="106"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="358" mass="41974" checksum="B8CC64D39F918BE5" modified="2025-10-08" version="1">MQPSNFINSEMQNQNPKIATKINFLKENSKEIGNKIRKLEQIGYKNTKFNDSFDYENPKIDKSQSKINEAKIDNPKKMRKFTQKTTTQIYKEDSNHNKNNNNESSNPDKQKNDESEKNLKEMAEDLIKIYQNNELKEARKENLETIKQNEALKIEYEEISKQSLNLQNQIDELFLKEKNLQNEILVKSAQIDRILSKNAKFCEDFGKILDKISNLNSDSVDCDELFNQIKILRFNSKNGEKTENFILKLENFAIKIFQNLRNVEQKENSNKQKFPKNGEDSKGKWLENIQKIAFDGRKDYEKIILFSKEMVETAKRMLETLKLSSENQVVEDLRSLLIGLVEKIKEVTESLVVVNEKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMV9</accession>
    <name>A0ABV2AMV9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001010">
        <property type="protein sequence ID" value="MES1921000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="8101" checksum="4E717360C1CB2AA3" modified="2025-10-08" version="1">MLHAQVDKCPIPLTVVEHNTDDQKVPNVCKIPFHDFQFGVGLLIDEKFDGPLTARWNSEIPEHFSIRSCLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY6</accession>
    <name>A0ABV2AMY6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Eukaryotic translation initiation factor 5B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">FUN12_1</name>
        <name evidence="8" type="ORF">MHBO_002608</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001012">
        <property type="protein sequence ID" value="MES1921003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01887">
        <property type="entry name" value="IF2_eIF5B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381:SF4">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 5B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR IF-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 8" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="7">
        <location>
            <begin position="282"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="92"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="201"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="10"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="28"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="92"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="208"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="434" mass="49118" checksum="006C218DFD3A2BB9" modified="2025-10-08" version="1" fragment="single">MAKKRQNKKASKEDKDDKELDAIMDFLNDSSAPAKTEQQNKSKTKNINSKKPQNANPPKNKAKSAIALKLQQRKKLIEKQRKKQLELELERQKKEQAIKEEEERIENERKEELKRKKQLKKEKIEKAKKEGTYLTPKQLKKKQAAQIAKEQFISAGMLKDKTVPIKKQAKKKKAKKKFIKAEQLINEEQIAKEKIIEVAADSDKNDSEQSVESISNWENVTSESESNGSEQVLESKETPLLNTKTTADNETSEIYKTVPNGAKKFIKKDLKRDKTKTKENKLRSPICCVLGHVDTGKTKLLDKMRSTSVQDNEVGGITQQIGASFFPQNFIAAAAKKLEAAGLEPLSCKVPGLLVIDTPGHESFSNLRKRGSNLCDIAVLVVDIMHGVEPQTRESLRLLRSKKTPFVVALNKIDKIYEWEAHPGEPFVVSILKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN07</accession>
    <name>A0ABV2AN07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002647</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001050">
        <property type="protein sequence ID" value="MES1921049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14862" checksum="998FB29CDB71C0F8" modified="2025-10-08" version="1">MKKRAFGAIIISAGAILLFYFYRKATKRNLSYFPAKIAKSIRNKFGDELLFYSKKLPNGERVLSLNTNFQIYNEPDSHSSKSFFDILDKYLEFIKHENDDEKDFQKLFLQFSAKKCPFFRQKNRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN57</accession>
    <name>A0ABV2AN57_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002688</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001085">
        <property type="protein sequence ID" value="MES1921103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="134" mass="15621" checksum="3872FBF45952126A" modified="2025-10-08" version="1">MLDLCLKFSRLYKNAMNKLSMAKIAFTNKHFAKKANNKSFVFNQKMSAEFAKKAAADEETTQKLNELDVLFNVNAKNLLSKIRLQSSRTDSFVTINNLSLLCFISHKNLHLSNKKCCFSYFLKLIYYHRRLQII</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN71</accession>
    <name>A0ABV2AN71_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Trimethylguanosine synthase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Cap-specific guanine-N(2) methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">TGS1</name>
        <name evidence="8" type="ORF">MHBO_002690</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a 5'-end (N(2),N(7)-dimethyl 5'-triphosphoguanosine)-ribonucleoside in snRNA + S-adenosyl-L-methionine = a 5'-end (N(2),N(2),N(7)-trimethyl 5'-triphosphoguanosine)-ribonucleoside in snRNA + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:78479"/>
            <dbReference type="Rhea" id="RHEA-COMP:19087"/>
            <dbReference type="Rhea" id="RHEA-COMP:19089"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:167623"/>
            <dbReference type="ChEBI" id="CHEBI:172880"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="5">
            <dbReference type="Rhea" id="RHEA:78480"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a 5'-end (N(2),N(7)-dimethyl 5'-triphosphoguanosine)-ribonucleoside in snoRNA + S-adenosyl-L-methionine = a 5'-end (N(2),N(2),N(7)-trimethyl 5'-triphosphoguanosine)-ribonucleoside in snoRNA + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:78507"/>
            <dbReference type="Rhea" id="RHEA-COMP:19088"/>
            <dbReference type="Rhea" id="RHEA-COMP:19090"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:167623"/>
            <dbReference type="ChEBI" id="CHEBI:172880"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="3">
            <dbReference type="Rhea" id="RHEA:78508"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in snRNA + S-adenosyl-L-methionine = a 5'-end (N(2),N(7)-dimethyl 5'-triphosphoguanosine)-ribonucleoside in snRNA + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:78471"/>
            <dbReference type="Rhea" id="RHEA-COMP:19085"/>
            <dbReference type="Rhea" id="RHEA-COMP:19087"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:156461"/>
            <dbReference type="ChEBI" id="CHEBI:172880"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="6">
            <dbReference type="Rhea" id="RHEA:78472"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in snoRNA + S-adenosyl-L-methionine = a 5'-end (N(2),N(7)-dimethyl 5'-triphosphoguanosine)-ribonucleoside in snoRNA + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:78475"/>
            <dbReference type="Rhea" id="RHEA-COMP:19086"/>
            <dbReference type="Rhea" id="RHEA-COMP:19088"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:156461"/>
            <dbReference type="ChEBI" id="CHEBI:172880"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="4">
            <dbReference type="Rhea" id="RHEA:78476"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyltransferase superfamily. Trimethylguanosine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001088">
        <property type="protein sequence ID" value="MES1921106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019012">
        <property type="entry name" value="RNA_cap_Gua-N2-MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14741">
        <property type="entry name" value="S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14741:SF32">
        <property type="entry name" value="TRIMETHYLGUANOSINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09445">
        <property type="entry name" value="Methyltransf_15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00018517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00025783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00047418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00048740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00049075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00049790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="20067" checksum="F482BCBBA27D80E8" modified="2025-10-08" version="1">MDYVSWYSVTPEFVAKRIAARMACNIVVDGFCGAGGNSIQFASTCDAVYAIDNNENRLRCAKNNAAVYGASNIEFILGDVFAIVPLLIADCVFMSPPWGGPEYSKKLTFDFSDLDSLSGFKILSMAAKSSKNIGILLPRNISHGQILDGCRNFNGWPCEIENFFLGNQHKLCTVYFNDLTKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE2</accession>
    <name>A0ABV2ANE2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ATPase class I type 8B member 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ATP8B4</name>
        <name evidence="5" type="ORF">MHBO_002752</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001133">
        <property type="protein sequence ID" value="MES1921184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF150">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1921184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23270" checksum="047C36D2708B03CE" modified="2025-10-08" version="1">MEMTKLIHAFNINRDKEMRSNKKMAKTRSSNLTDEIGQVNVMFCDKTGTLTKNKMAFSCCSVRGKKFIDNFDQIEQTENRKNGKKLKKSNYSEFKNDFSEEKSRSYFSDSLKDLLKSGDKMANEFLTLLAVCHTVITEYPECDENGSSHEHTPSCKIQYQAESPDEKALLIMAKNHGYFCIVNFNNLNLTKFYKTLKEKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS2</accession>
    <name>A0ABV2ANS2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">aspartyl aminopeptidase</fullName>
            <ecNumber evidence="4">3.4.11.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002862</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Release of an N-terminal aspartate or glutamate from a peptide, with a preference for aspartate.</text>
            <dbReference type="EC" id="3.4.11.21"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the peptidase M18 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.21" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010001240">
        <property type="protein sequence ID" value="MES1921319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.250.10">
        <property type="entry name" value="Aminopeptidase i, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.10">
        <property type="entry name" value="Zn peptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001948">
        <property type="entry name" value="Peptidase_M18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023358">
        <property type="entry name" value="Peptidase_M18_dom2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28570">
        <property type="entry name" value="ASPARTYL AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28570:SF3">
        <property type="entry name" value="ASPARTYL AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02127">
        <property type="entry name" value="Peptidase_M18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00932">
        <property type="entry name" value="AMINO1PTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101821">
        <property type="entry name" value="Aminopeptidase/glucanase lid domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53187">
        <property type="entry name" value="Zn-dependent exopeptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="8 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="6 11" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="274" mass="30329" checksum="2EA9F776173852ED" modified="2025-10-08" version="1">MTAQSIAQRFLEFSNCSPTAFHCVENVKRKLLAAGFEKVKLSGEKQISANRFRRNGKYFFTRNESSIVAFAMGGEYQPGNGATVMVAHTDSPGLHLKPVSGTKSSGYNTLAVETYGGGVFSSWLDRDLSIAGRAFVKNGNAIESRLFKIDRPILSIPRLAIHLWKSAERPNGVALNFENHLKPVISMIGQNTKENNDENKAYGDKLFSLFSESLKIDKTDILKIKAQLYGTEKGSIGGLNKEFVYAPRLDNQMMSFVVTTALTNSVEGKIRIYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ3</accession>
    <name>A0ABV2ANZ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metalloendopeptidase activity</fullName>
            <ecNumber evidence="2">1.14.18.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">MMP23B</name>
        <name evidence="2" type="ORF">MHBO_002925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.14.18.1" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001305">
        <property type="protein sequence ID" value="MES1921394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004503">
        <property type="term" value="F:tyrosinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1280.10">
        <property type="entry name" value="Di-copper center containing domain from catechol oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008922">
        <property type="entry name" value="Di-copper_centre_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002227">
        <property type="entry name" value="Tyrosinase_Cu-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00264">
        <property type="entry name" value="Tyrosinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48056">
        <property type="entry name" value="Di-copper centre-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyrosinase copper-binding" evidence="1">
        <location>
            <begin position="34"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="92" mass="10660" checksum="6A00837E9EC13BC8" modified="2025-10-08" version="1">MVSIRRNIKNLSHKQKLRVVNAIAKMMEPQRGGSEYEKLAVLHTNYCAHGVESFPVWHRIYIAIFEASMQVLLLIDSFTLKIVKFVTLINLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ5</accession>
    <name>A0ABV2ANZ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002931</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001314">
        <property type="protein sequence ID" value="MES1921400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="69" mass="7713" checksum="C0EBC860C8E46EA6" modified="2025-10-08" version="1">MKAFSRLKPNSTKKIKIEGFINLTSDSIDDTTNGNIEKYFDQNILPRFMPLHSISGLVGVGENAQKMIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP04</accession>
    <name>A0ABV2AP04_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">EXS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002937</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001320">
        <property type="protein sequence ID" value="MES1921406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004342">
        <property type="entry name" value="EXS_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10783:SF103">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 53 MEMBER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10783">
        <property type="entry name" value="XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03124">
        <property type="entry name" value="EXS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51380">
        <property type="entry name" value="EXS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="117"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="343"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="domain" description="EXS" evidence="6">
        <location>
            <begin position="238"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="410" mass="48309" checksum="5274F6158CC83C42" modified="2025-10-08" version="1" fragment="single">NIYICFYANGDRKRGKQQISTKKRKVSNQLNLANGLILGFVVSLLILLFFQLTRKVSADMTAKEIYEANLPVYRFFGLVSVHIFFWGIDKIVLERYQVNYHFVMQVAPKNRLLSQQIILTGVSIAFSSLFLLNGVVIIGLTFGTKFIFQNIFALVYFIALVFCLFNPFKFLYHNARFYLIKVFQSVFSLPFHNIKFIDFFIMDQFISYQRILMDFNYSICYFFSGDFATSKYDSQICNQIGKNNWISYLLSYVPFFVRAAQCIKRYFESNLPFPHLANAGKYISVIFYAVSGVVRKIYPNNGSRLANIIFGIYSSIYTTTWDLIVDWSLFRYPSKNCLLRDKIIFPIYFYYFSILTNLFLRALQLVPVFKGETFYNNFYMTFLLAFCEILRRCQWNIYRIENEHLNNVGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP46</accession>
    <name>A0ABV2AP46_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002843</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001226">
        <property type="protein sequence ID" value="MES1921294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059153">
        <property type="entry name" value="NSD_PHD-1st"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623">
        <property type="entry name" value="CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45623:SF49">
        <property type="entry name" value="SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23011">
        <property type="entry name" value="PHD-1st_NSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="6">
        <location>
            <begin position="1"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="444" mass="50008" checksum="13F573192C9E836D" modified="2025-10-08" version="1" fragment="single">NPNLNKRGLGVNLHTADTVIIYDSDWNPQADLQAQDRAHRIGQTKTVRVFGLITEGSIEERIAQRAEKKLYLDAVVASKTGARRKSRRPPTEKDKGKRELLAMLTFGAERVFSTEGRSVSDEDVDLLLGIRKKDARSRSRLEPSAANAAEYDVRAGPLAITQFRGEKVASLRCAGQNPVERIAVEWAEFNNRLPPLDAATAEDGRELEFVDVKYKRFYGHEATCHACKQEGLLLLCEWCPRSYHHECLGYDAVPEGSFKCPQHKCDACFRSAHEAGGMLFRCVNCPHCSCEDHLSFDIAPVDRCEELEAFGYKRSSSAFYVLCSKRCEKAATERRKRRATEEESASSAKVSFALKKKWEFLPQSVKNRIRTALESDEVCSLSELPGFVTKLKGFVPNSRHRPAVAAAPETARSSLRLRSFADLLSHQRMAWRFGAKRQKRGQRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APG6</accession>
    <name>A0ABV2APG6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Zinc finger PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003101</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001492">
        <property type="protein sequence ID" value="MES1921568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037869">
        <property type="entry name" value="Spp1/CFP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46174">
        <property type="entry name" value="CXXC-TYPE ZINC FINGER PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46174:SF1">
        <property type="entry name" value="CXXC-TYPE ZINC FINGER PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Zinc finger PHD-type" evidence="6">
        <location>
            <begin position="33"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11918" checksum="6EB5BA41BD3BFA4C" modified="2025-10-08" version="1">MEALKSSNKSLETTVKLNENNFKFQAKKESSDLCVCNNPKEEKNVFYIGCDICEKWYHGKCVRINEDFSKFIDKYFCFRCINNKTPTQGKCILKKFCFEML</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APS1</accession>
    <name>A0ABV2APS1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003208</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001622">
        <property type="protein sequence ID" value="MES1921676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="383" mass="44909" checksum="79068FB6808BB873" modified="2025-10-08" version="1">MIAFCVCLTSSFFVITKLIFLENTKNRHLLLFALIFNWICLIFYFIFRRKDTIQFKRLYEASDSLELAEFSESVNSIPLLSKNDLNELLNKPKNKISHEKDRFLVAQKTNFEQFLKINGRIFCYKLIKSRFVNKKLTNLVFICGFLDFHNNWDHIAKKLSFNNKTKKIVILNLVAETKHGQNKNLINDQKLGKNYFQLSNKIINKLFDVLNIKTAIIVSRSIFAKNALSFALSNRERVKGLLMLSPCDRLPSFLVSAIKSKIGEKETKKLVKSEIINFQNTNPLFTDVKTSSLKNIFEQNKIDSWFEKLKEIVFENDKYEHFFENEKVKNLTKSVKSVVIWERRSDIIKFKLKEVKTVLLENDISGDLRKSVVLENFEFLLNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APY7</accession>
    <name>A0ABV2APY7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LTD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003254</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001682">
        <property type="protein sequence ID" value="MES1921724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1260">
        <property type="entry name" value="Lamin Tail domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036415">
        <property type="entry name" value="Lamin_tail_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74853">
        <property type="entry name" value="Lamin A/C globular tail domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="137" mass="15507" checksum="06F30D03040AF747" modified="2025-10-08" version="1">MNENDEKSKNGEKPQTKNPKNENGDEEDFILECCAGSTRIDIKNQSEGDVNVEGWSLKREESNLVKSLNFPSSLKQNESFYVYPTKALMKEDVSEGIKKVWAPAAFDSEKGCVIIVNENGSEMYKMEINEKEDESET</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ10</accession>
    <name>A0ABV2AQ10_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">NF-X1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_003282</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NFX1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001718">
        <property type="protein sequence ID" value="MES1921753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034078">
        <property type="entry name" value="NFX1_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000967">
        <property type="entry name" value="Znf_NFX1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12360">
        <property type="entry name" value="NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12360:SF12">
        <property type="entry name" value="TRANSCRIPTIONAL REPRESSOR NF-X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01422">
        <property type="entry name" value="zf-NF-X1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00438">
        <property type="entry name" value="ZnF_NFX"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="NF-X1-type" evidence="10">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="NF-X1-type" evidence="10">
        <location>
            <begin position="77"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="NF-X1-type" evidence="10">
        <location>
            <begin position="108"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="NF-X1-type" evidence="10">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="NF-X1-type" evidence="10">
        <location>
            <begin position="221"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="NF-X1-type" evidence="10">
        <location>
            <begin position="258"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="352" mass="40234" checksum="690897CF1C293AE0" modified="2025-10-08" version="1" fragment="single">RRSCLDPLPTCEKICEKIKCENGHFCTKKCHDSQCPKCRKKVVKTCDCGYKQFSLPCFKFKGKMIKCKSICKTLLNCGRHFCETQCCAHRRNGANHICDKICQKLLSCSIHRCEEQCHSAECPSCRVQYQNGLICKCGNTKIGGFFFCGDKKLICNNRCSETLLCGHKCLKKCHFGECPPCSQLIEIDCYGKHKKIKVKCKILLKQKSVSCGNFCDKTKHCGIHSCKRKCHEKDGKIFCSKDDESMSCGDICLLRMNCGHFCKRKCHPKVDCENFKCEEMVTIKCVCGRIEKSGKCENTAERKNLNCDGKCEAKKRAEDFRKAFGIKKAGLVRNKDIFENNFWKNCDLSQFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ19</accession>
    <name>A0ABV2AQ19_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">37S ribosomal protein S25, mitochondrial</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003168</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001577">
        <property type="protein sequence ID" value="MES1921639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="206" mass="24651" checksum="A56D34909DE3244D" modified="2025-10-08" version="1">MFKKHMQKGKRRNVLSRLIRLNDAGLERANNWQEAAKIYPPDVVLKYPKPPKIKLERDQFYRENKLRIDNIPQIYNKEDLDGSSSPEYQIARAQSYFSKRGYKRNKAYYLAKLLLRNQQAILLRQSELSERKRIDPENKFEGEDILSAWENRLREEIDEGDKRTPPKELLAKITAKFPENFIRKDDDFPERKIEDIEFDGRDDFDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ79</accession>
    <name>A0ABV2AQ79_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">SNARE protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_003365</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Endomembrane system</location>
            <topology evidence="7">Lipid-anchor</topology>
            <orientation evidence="7">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the synaptobrevin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001822">
        <property type="protein sequence ID" value="MES1921828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14824">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.50">
        <property type="entry name" value="Longin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010908">
        <property type="entry name" value="Longin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042855">
        <property type="entry name" value="V_SNARE_CC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45806">
        <property type="entry name" value="SYNAPTOBREVIN HOMOLOG YKT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45806:SF1">
        <property type="entry name" value="SYNAPTOBREVIN HOMOLOG YKT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00957">
        <property type="entry name" value="Synaptobrevin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01270">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50859">
        <property type="entry name" value="LONGIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50892">
        <property type="entry name" value="V_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0488">Methylation</keyword>
    <keyword evidence="4" id="KW-0564">Palmitate</keyword>
    <keyword evidence="6" id="KW-0636">Prenylation</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Longin" evidence="9">
        <location>
            <begin position="12"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="V-SNARE coiled-coil homology" evidence="10">
        <location>
            <begin position="152"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00046278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1921828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="212" mass="24698" checksum="9BFE9E55D2969304" modified="2025-10-08" version="1">MAEKIQILYLGIFHKNAAEKPIKLGSVEELSSFGWLQRRSVREHLLFISRLLIENIGFEERQKIAMKDFPFLAHVFVQNNGLSGILVTNNQYPERVAFEVINKALLFFEEETFKNDNKDKTDFKTFSTDQQLKTELLQELMDRFQKPEEADKLLLLGTELEKIENIMNNNIDNLLGLGRNLDDLIKDSEDLSMMSKMFAQNAKKNNQCCRLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQK0</accession>
    <name>A0ABV2AQK0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ubiquitin carboxyl-terminal hydrolase 15</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">USP15_1</name>
        <name evidence="3" type="ORF">MHBO_003166</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010001575">
        <property type="protein sequence ID" value="MES1921637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050185">
        <property type="entry name" value="Ub_carboxyl-term_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646:SF46">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="2">
        <location>
            <begin position="1"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="224"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="245"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="325"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="340" mass="39647" checksum="743CD112396AA09A" modified="2025-10-08" version="1" fragment="single">MRKMWSGETGVVSPSDLKLCIGQFAPRFSGYNQQDSSELLFFLLDGLHEDLNLVKQKPFTENIEQNGRCDKVVAREAWDTHLKRNRSIIVDHFQGQIKSTLVCPSCDFVSEMFDPFLALSLPMFSSETRMLPVTLVPGSKSKRCIRMVLELHRFGTIRDVRMKVCKMLNCDENDIVITEIYEKRGYRFKKDNQSINSILKNDLIFIYVVKDHLKKFYIENSNNATRSNGKMEENDDFQDNGNFAKNEKGNFAENGQEHINKKEKIENDKKDEKMKKLDKNLNLDEEKIGEKVEKMYSENDEKENEKTVCENENDKENDEIIEENGNVQQNQNDSYYNFPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQX7</accession>
    <name>A0ABV2AQX7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003590</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002177">
        <property type="protein sequence ID" value="MES1922071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="82"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="19642" checksum="89519C379E7BBD35" modified="2025-10-08" version="1">MVEKAKDKKDVITKNAKDKKENVAGKVKEIGNKIEEDAKSFGEHVKNIDFLVPNRSRKTKLIDKNFDGSALFLETRNNQSDDNYKSRRKLDVNGKSNESKNRINNDAKNDNKHKDKNEILKNVKNNHDKDILKNGKSDDGKIVTNGKSTKKKAALLNKLKKNDHKSDFVIRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR87</accession>
    <name>A0ABV2AR87_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002338">
        <property type="protein sequence ID" value="MES1922174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="entry name" value="LON domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="191" mass="22602" checksum="EB1738DF8EA3B0C6" modified="2025-10-08" version="1">MSNAFLQALFLSYVFLNRYIKLLQRCRKENREFAFAYRRWQDFADYSSVKENTIFQPRTEKMLVVCVAKVKAVKTKEDDTTQIICEGIARKLAVCLEIEEMANGIDVVELTECPIQKVVILKINKKVHPNCENEGQRIDMVKMFKEMMNIRILQFKIQYPLESVDYTIPKEGVEFPYWFFGYFLPSFKFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARD6</accession>
    <name>A0ABV2ARD6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Holocytochrome c-type synthase</fullName>
            <ecNumber evidence="10">4.4.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_003536</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Lyase that catalyzes the covalent linking of the heme group to the cytochrome C apoprotein to produce the mature functional cytochrome.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>holo-[cytochrome c] = apo-[cytochrome c] + heme b</text>
            <dbReference type="Rhea" id="RHEA:22648"/>
            <dbReference type="Rhea" id="RHEA-COMP:10725"/>
            <dbReference type="Rhea" id="RHEA-COMP:10726"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="ChEBI" id="CHEBI:83739"/>
            <dbReference type="EC" id="4.4.1.17"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Mitochondrion inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the cytochrome c-type heme lyase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.17" evidence="10"/>
    <dbReference type="EMBL" id="JBDODL010002082">
        <property type="protein sequence ID" value="MES1922016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000511">
        <property type="entry name" value="Holocyt_c/c1_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12743">
        <property type="entry name" value="CYTOCHROME C1 HEME LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12743:SF8">
        <property type="entry name" value="PROTEIN HRI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01265">
        <property type="entry name" value="Cyto_heme_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00822">
        <property type="entry name" value="CYTO_HEME_LYASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 10" id="KW-0349">Heme</keyword>
    <keyword evidence="6 10" id="KW-0408">Iron</keyword>
    <keyword evidence="9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5 10" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1922016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="23560" checksum="0153DEFFDEFD50E8" modified="2025-10-08" version="1">MGKKNSDCMENYKSAHRSDSVEKLDLSPTEISDLFLPENNIVPVDTIPAAGSGNSPDGEEWLNPSGNQLIRSCNRKQKKLDPQDALGMAATHVAVTNATWTEIMEYEKLHRCENVRLARFRGLDGKYSPKARFLHLFGCPLPFDRHDWTVDRCGKEVRYVIDYYSQLDAKSGNMEFFVDARPALTPSGFLDRVWMAYKRRKNGRSVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARI6</accession>
    <name>A0ABV2ARI6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003786</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002505">
        <property type="protein sequence ID" value="MES1922276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024371">
        <property type="entry name" value="AcetylCoA_trans_1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004752">
        <property type="entry name" value="AmpG_permease/AT-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12778:SF9">
        <property type="entry name" value="ACETYL-COENZYME A TRANSPORTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12778">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13000">
        <property type="entry name" value="Acatn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="170"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="228"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="260"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="339" mass="38484" checksum="47E79C073BEE7778" modified="2025-10-08" version="1" fragment="single">GFSNLMVLLLLSAKSSYKDIAIFSTTYYPYSLKLLWSPLVDSIFWKKIGRRRSWILPTQFVTAIAFIALGTPAHFFMRENQKSEFSLIEALINQNEIAILTSIFMLLFVCTSTQDIALDAWGLQLLPGEINHLVSTCQTAGLNLGNAIGYNAVILLTSDKFSSLTSFKPVTVGGFCLFVGFFAIFLNFWILFFVAESPYKNEKEKDHSTKEAYSSIVTMISNSNIRQIVFIALTSVAPFAPNMFLLNSYSVDRKFVSKELLALLDILSVPICLCIPIFSKNKRFLENWLWYFNVFANLNFVNLQFFLIKIAIVDKTSSKRFFVPVSLIKQIFPGKNIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS06</accession>
    <name>A0ABV2AS06_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Macro domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003837</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002597">
        <property type="protein sequence ID" value="MES1922329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="entry name" value="Leucine Aminopeptidase, subunit E, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002589">
        <property type="entry name" value="Macro_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01661">
        <property type="entry name" value="Macro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="Macro domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51154">
        <property type="entry name" value="MACRO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Macro" evidence="1">
        <location>
            <begin position="51"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="20243" checksum="5282BBD0F1A476FF" modified="2025-10-08" version="1">MHLQEVHFSDRNSVIVRLIADTFEQKLKSLAVPPRPRFFPSCKEISVPEQPNKTECILKLHFKVVIYCGNIHESDVEAVSCGQDPKLQSKGRIAQDIIKKCKNLKDELKTLSKKETQPGETILMNCNLKYAKRVIFVITESPSSADQYIFQNCYRNVLNIADQNGITKLALPLIGTGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASG1</accession>
    <name>A0ABV2ASG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004119</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003187">
        <property type="protein sequence ID" value="MES1922603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7574" checksum="2E149E0C8CD83E45" modified="2025-10-08" version="1">MSLEVKELRSEIAALWEVVTKLSQPPSQRSRKPQTQKCRACSNNVPVYNLCWHCGSSEHFPENTADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASM1</accession>
    <name>A0ABV2ASM1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003879</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002684">
        <property type="protein sequence ID" value="MES1922372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="78" mass="8956" checksum="C9CEE2A390E15F8D" modified="2025-10-08" version="1">MHISLIEIMDNINVNWTASMIKCERQNEYMFGNVTLNNADQDCQRISPKHTSPSWIGVARQSYVSEDKGKVLAIIQSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP3</accession>
    <name>A0ABV2ASP3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004202</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003403">
        <property type="protein sequence ID" value="MES1922680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="111" mass="12783" checksum="72421A8D948A92BF" modified="2025-10-08" version="1" fragment="single">YEVLEKFPFGKCKCLRGKKCPKSINDYTITGFAEKSGVKDETELRVYKANNKIYAMKESEPGSITLTEEKVLKKAAVDNVNNIVRLYHTFEDDGKIYFIMELCITNLEFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT74</accession>
    <name>A0ABV2AT74_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004401</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003939">
        <property type="protein sequence ID" value="MES1922873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="8882" checksum="B20632EA368DD9EB" modified="2025-10-08" version="1">MGCHLNLGNTAITLNTNMTKLARNPDGCQGKASQSNRGSILSHQPSATLTKLDRNATAWTFPYSITICVDISNQVDVTTHHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATN1</accession>
    <name>A0ABV2ATN1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004562</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004407">
        <property type="protein sequence ID" value="MES1923028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13333" checksum="67880ECB5C490089" modified="2025-10-08" version="1">MTIQNMAKKAVVWVQTMSYLLIIASIYCITSMLVMAVNIRVFYISLFFSICSAIVGLMIGAKWNVFWESDINTSCCIKHEKLFGEDTNEMMLIETLENNVKEEHDKNEKENVNFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATQ5</accession>
    <name>A0ABV2ATQ5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004402</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003942">
        <property type="protein sequence ID" value="MES1922874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="14814" checksum="A71DE93030A4DA06" modified="2025-10-08" version="1">MDILNEKAEESLPHLKQISYENLGLKIDKSASDYNSDDEIYATAKAIEKMERKKSKMQNAVKYDESGNPILEIVKGRNVEDLDPIDHQNIDYESFIKNVYIENANVTAISSNKIKSFHKENGFDGLNCEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU0</accession>
    <name>A0ABV2ATU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004607</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004541">
        <property type="protein sequence ID" value="MES1923070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="82" mass="9236" checksum="F5912E2E4BE341D7" modified="2025-10-08" version="1">MRDETSLIVYTLMMQQLSPMMSPVRCKVNERLGIRSLPVHVLIASNSPTNNWKYILSVDFISVTLKSTSTVKIDPIANGKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV0</accession>
    <name>A0ABV2ATV0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RSE1/DDB1/CPSF1 second beta-propeller domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004597">
        <property type="protein sequence ID" value="MES1923086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058543">
        <property type="entry name" value="Beta-prop_RSE1/DDB1/CPSF1_2nd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23726">
        <property type="entry name" value="Beta-prop_RSE1_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 second beta-propeller" evidence="1">
        <location>
            <begin position="3"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF23726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="172" mass="20167" checksum="1F5F2D60B95C67F4" modified="2025-10-08" version="1" fragment="single">MISDGTLLTYEAFYFDQNKSLNGQSYYPLRLSRIKNEYVSPYKQQSDKTPNFLTSLKNKIGNLRYFYRFKNICGHPGIFVAGDNPQFMFEIRGKLKFFPLKPKKRIWYFAEMDNNRFLLADGNLKICSISAFIDFSCDIPFRRVPIRQSVSKIMFHPETSAYVVSCFKAKEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU01</accession>
    <name>A0ABV2AU01_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protein arginine N-methyltransferase 5</fullName>
            <ecNumber evidence="5">2.1.1.320</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PRMT5</name>
        <name evidence="5" type="ORF">MHBO_004674</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.320" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010004807">
        <property type="protein sequence ID" value="MES1923132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035243">
        <property type="term" value="F:protein-arginine omega-N symmetric methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.160.11">
        <property type="entry name" value="Hnrnp arginine n-methyltransferase1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025799">
        <property type="entry name" value="Arg_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035075">
        <property type="entry name" value="PRMT5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035248">
        <property type="entry name" value="PRMT5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10738">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10738:SF0">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05185">
        <property type="entry name" value="PRMT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17286">
        <property type="entry name" value="PRMT5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="163"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="PRMT5 arginine-N-methyltransferase" evidence="3">
        <location>
            <begin position="3"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="domain" description="PRMT5 oligomerisation" evidence="4">
        <location>
            <begin position="54"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF17286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1923132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21490" checksum="B96000992B96FCB7" modified="2025-10-08" version="1">MCSDIRNLTKTKMDKFDLIVSELLGSFGDNELSPEIIQIAEKFLNKDGKIIPQKYTSFLAPVSDETLWNKIENINISPESPKGSLYEMAIVSNLYKKEYFSEPKECYEFCHPLTKDDDLSKYCKLSFTAKASNKLDGFAGFFSAVLFDKIDLSINPQNYTKNMMSWFPMFFPLNVLSFLNFLAKVNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU85</accession>
    <name>A0ABV2AU85_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RSE1/DDB1/CPSF1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004771</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005175">
        <property type="protein sequence ID" value="MES1923230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004871">
        <property type="entry name" value="RSE1/DDB1/CPSF1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03178">
        <property type="entry name" value="CPSF_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RSE1/DDB1/CPSF1 C-terminal" evidence="1">
        <location>
            <begin position="9"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="112" mass="12562" checksum="D389235DE6C1872E" modified="2025-10-08" version="1">MKTMGAYEQFEEHEYVTALSQAKLDLQKKGHVRRTFDFVAVGTAFQKGEESACRGKVYIFAVEKKRDQRPRVANLEKLFDQKQFGPVTAISTVSGLLALCIGPKVLQFSSNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC1</accession>
    <name>A0ABV2AUC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004796</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005300">
        <property type="protein sequence ID" value="MES1923251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="148" mass="17168" checksum="7E5EA8C31F9CBE64" modified="2025-10-08" version="1" fragment="single">DFWNNNNKNIKLMEEKKIQFYDINKLSVDIFKTYGSYPKKMNTASGLLWRVLAETQLALGRPLFPFTKHNKEHKKIKVTCNKAGVEHFLVEVFESFGADVTDIKNVKNFENFDVVILPIQTSKLNVYKMTDQMFASMKPGAVLTDTYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUC2</accession>
    <name>A0ABV2AUC2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copine-3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CPNE3_2</name>
        <name evidence="2" type="ORF">MHBO_004520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004254">
        <property type="protein sequence ID" value="MES1922988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045052">
        <property type="entry name" value="Copine"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857:SF106">
        <property type="entry name" value="C2 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857">
        <property type="entry name" value="COPINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="184" mass="21239" checksum="FE6F01A4AC6174D0" modified="2025-10-08" version="1">MKSSLLCDNDPNKKLQIKCYNHSKIFKNDLIGVCYFEVKDLKLSASLHLLKEKHEHKNENSKNGDSRDNVEKVDNTENGYKHKNDDKHENGPEKWPKRGILEVTNFKSSRLYTFENYCENGLCFNSALAIDFSLNNGPFDNPQSLHFAGGYNEYESALYSLSTALSKFSTERRFSFWGLVSFLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV8</accession>
    <name>A0ABV2AUV8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005017</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006234">
        <property type="protein sequence ID" value="MES1923445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="93" mass="10121" checksum="5702E2E2D953AEF0" modified="2025-10-08" version="1">MSNTIYTVLSEGHSIIYGQSCAISDVNLSDESQITLRANPCGSCPVVIGLCFCLSLRCALTVFRTLYLTKMDFSAQHVSCLFIFSSSTEPISI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX4</accession>
    <name>A0ABV2AUX4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004742</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005067">
        <property type="protein sequence ID" value="MES1923197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12107" checksum="9733F316C007BE60" modified="2025-10-08" version="1">MSSRTVTEQKLICLLFLAMLLFQTATICYSNPIKLNYLSLVENRYFFTTLGNVLQTISTILLVSFILLIADLINRISLNYSIFELLTKYKISLGLLKFNGNNQICT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV12</accession>
    <name>A0ABV2AV12_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004864</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005582">
        <property type="protein sequence ID" value="MES1923309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="64" mass="7236" checksum="42A67D9D51FBDEFE" modified="2025-10-08" version="1" fragment="single">GGITIKPGWDHDKTRVGSRENQGGITIKPGWITIGTSVFTWDMMGIIKFFENLFDEYHKGRAHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA0</accession>
    <name>A0ABV2AVA0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Neurotransmitter-gated ion-channel ligand-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005194</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007064">
        <property type="protein sequence ID" value="MES1923595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.170.10">
        <property type="entry name" value="Neurotransmitter-gated ion-channel ligand-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006202">
        <property type="entry name" value="Neur_chan_lig-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036734">
        <property type="entry name" value="Neur_chan_lig-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006201">
        <property type="entry name" value="Neur_channel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18945">
        <property type="entry name" value="NEUROTRANSMITTER GATED ION CHANNEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02931">
        <property type="entry name" value="Neur_chan_LBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63712">
        <property type="entry name" value="Nicotinic receptor ligand binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Neurotransmitter-gated ion-channel ligand-binding" evidence="1">
        <location>
            <begin position="21"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="104" mass="12211" checksum="F7587C775F530C4A" modified="2025-10-08" version="1">MDRYLENFQYNYSVEEIQIIMDSDNKNPIRVSNNGTCEYDMLDYMVTNCDTDPTYYPYDTQTCNLVIAAWGYSQNEIEFVSAATYSPFYKENGEWDLTGEDLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AW09</accession>
    <name>A0ABV2AW09_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DEAD/DEAH-box helicase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005074</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the helicase family. RecQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006474">
        <property type="protein sequence ID" value="MES1923498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13710:SF108">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE Q4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13710">
        <property type="entry name" value="DNA HELICASE RECQ FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD/DEAH-box helicase" evidence="2">
        <location>
            <begin position="71"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16411" checksum="E733C35CE414F304" modified="2025-10-08" version="1">MNENLYCDLLDFDKLKKAVLENSENSETFEKSELSINDSNKIDFDTNIDNIDIDDSINKALKDKFGLKQFRPGQKEIIKLVMSEESCLSILPTGTGKSLCFQLPSYLLKGVTIVVTPLISLMQDHLRNLPNCLNGKIWNSVQKQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE27</accession>
    <name>A0ABV2AE27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">RPS6KA2</name>
        <name evidence="8" type="ORF">MHBO_000017</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000003">
        <property type="protein sequence ID" value="MES1917980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00180">
        <property type="entry name" value="PKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167:SF23">
        <property type="entry name" value="CDC7 KINASE, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44167">
        <property type="entry name" value="OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="43"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="388"/>
            <end position="645"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1917980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="676" mass="77986" checksum="FF64500DE01039B5" modified="2025-10-08" version="1">MSANSKPMYIEKELDSYKEWLKPGAGGKLCCLSAECHVSMDDFLICSLICKKAATDVYRVIDYTDRKFYCLKSQRISRNETQIERELSLLKKVSNHPYFVDIFHAFRSGDFSYFVIELLSCNLEQMSKHEDFGDDDIGAVTVRIAEAVKHLHTFNIVGVDIKPGNIMFNRDGDLKLIDFGLSFDLDNSKESRLHRGTKYFTAPEVMNKQFCYKNDTFSVGVCVLSMLSENFRDDFEFKLSCLKDNNESDFKTALDGDIKDLKDIIWQSMRIKQSDRITIDQFLEHKYLSEYTINFSDYSDRLRKLVCVAMGNIWFQNNDIFRFDSKEKTTEENIQTIIKVNEKLSAQISANYPNHSLRGVDFPVVFEGNDFGKCMRPKCTCKTSTKDLSMNAFIGKGSPGKVFKATVNGEEVAVKVYLKTVENSRVATNEINVLNKLKHPLFVRLLHVYETKIFLYLCLELCKNNMEQLDEWKDLNKMNEYKTQGISAWVFKALGLLKKQRIIHTNLKPRNILFTDAGNIKISGFGKCLDLDRDDSTVYKSNLPPWVPPEVTRKLVTMKSPFWSLGTILYRLTTGNFVVGDESMSVENYFKTIYHTPVYKTICTKLNECTCSFDWKVFLSSLLTLPEEKRIGNICLPETTYHDYINAAMVLYDSNNLNTLDECEPNLSVYNFLLYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE53</accession>
    <name>A0ABV2AE53_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000009</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000001">
        <property type="protein sequence ID" value="MES1917972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1917972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="465" mass="55251" checksum="FAAC0BE2FE750561" modified="2025-10-08" version="1">MNEGTFDRIYMASKTRTRIVKTEFDEINRFASKYFTICTNLTKKIKKQYRKKNMNTLFKLLHDFLYNGGELSSIKDEINFIKNIFMAEYNKTPISDIQIQISSSEDESFEYVDEFESFTVPEKSYDSSDEKYQNEKDTVEKAKREKFVRDNIPILVKNKDKYDRMRKKITKIIRGKKFDDVIDLAKEFEELETLFNGPPEFTLIKFSEVSIFFNVSNCVLKSVNHGRCYYCPKIYGFDPYNYQFLKNEMAKFTEYIFKNKIKFFETHKPTEEQHKNIVKDLIAFLQSNLTKLSYDDFYVELDENRSPSKLVSEVDLETINYVHRVLELVENNDLSLFIKEYAFNTKKKIADIVLSDLIKSTEFYSKEKEYFSEAFMKELKNCFWRLSACMECIRATEASKSFLMLHDNLYLDKCKRTNIRKLNDFLLYLSGKQFYHLGTFVCTENCEICNELNTISFNNYSSKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEB6</accession>
    <name>A0ABV2AEB6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Secreted protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000089</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000011">
        <property type="protein sequence ID" value="MES1918066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5046868527" description="Secreted protein" evidence="1">
        <location>
            <begin position="19"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="104" mass="12374" checksum="297E050D55C6AD86" modified="2025-10-08" version="1">MALRYFCCWISNSLLISAAVWRLANFSAAVTQNNLFPAPIFLRRKSILRTNRVQTFYVFLLNYLFRKNCVLHIQNMRTFIVFYSVFATKIKLYFRSREISVGFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEL2</accession>
    <name>A0ABV2AEL2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">asparagine synthase (glutamine-hydrolyzing)</fullName>
            <ecNumber evidence="2">6.3.5.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Glutamine-dependent asparagine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_000138</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-aspartate + L-glutamine + ATP + H2O = L-asparagine + L-glutamate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12228"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58048"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.5.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-asparagine biosynthesis; L-asparagine from L-aspartate (L-Gln route): step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.4" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000017">
        <property type="protein sequence ID" value="MES1918121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01991">
        <property type="entry name" value="Asn_synthase_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00352">
        <property type="entry name" value="Gn_AT_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006426">
        <property type="entry name" value="Asn_synth_AEB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001962">
        <property type="entry name" value="Asn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050795">
        <property type="entry name" value="Asn_Synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11772">
        <property type="entry name" value="ASPARAGINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11772:SF23">
        <property type="entry name" value="ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING]"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00733">
        <property type="entry name" value="Asn_synthase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001589">
        <property type="entry name" value="Asn_synthetase_glu-h"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0061">Asparagine biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="11">
        <location>
            <begin position="2"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR001589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1918121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="578" mass="66409" checksum="2DE5EBF3CB8D5F35" modified="2025-10-08" version="1">MCGIFFYGGALKIRGKAKKELCERFRKLQHRGPDCSRVQYFNSNVMTGFHRLQVVDPTPAGMQPFVSSDGRFCSLVNGEIYNFREIAQFLKKKMSNYECKSDSDCEVVLNLFIYFLSKIREENRSRPEEEIYVETMRRVCKRVDGEYAIIIYDSEKQRVVFAVDELRVRPIFYGIDEDGGFYLSSEQKPLSFLPTISPVPAGSMGSRSVALGNKEALESAKISQHFDFESEKRRTDFKEISYSEAVQQLRNLLVDNLKRKLNPERSFAFLLSGGLDSSLVCAIASKLLAPRRIRTFTFGFSRRATDVIAAEEVAEYLDSIHETYIFNFEKGGRLVEEAIYFNESWDQTTTRASTAMLLGLKKMKKEHPEIAVVYSGEIADELLRGYLYNLLSPDPFSGRIDAIDRLRDISYFDGLRADRMVSSIGCELRLPFFSRSLLEFVLALPPEYIDPLSNQRVEKKILRDAFAGAKGEFLPEKVLWRTKHAMSDGTSEKDGWKDYLKSQAEKHVTHSRFEARAALYSHSTPQTKEDMWYREIFDSHGFAEESVPYKWMPSWCTETLLDSSATALSVFKEDRMDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEQ4</accession>
    <name>A0ABV2AEQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000191</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000024">
        <property type="protein sequence ID" value="MES1918180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15411" checksum="FB96EFFD17674EBA" modified="2025-10-08" version="1">MSSPKRDKPRIENFINLDRDRMIEEEFEKRFVLDPFITEVKREPRNLAEVMDECETTEDNRNKVDDTISPMEKMEFLETTHYSMCDFCGKLNTRFLVFSSDFEDLKACEDCKDEVYFNKKERKNIFGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF57</accession>
    <name>A0ABV2AF57_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000310</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000043">
        <property type="protein sequence ID" value="MES1918330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF458">
        <property type="entry name" value="SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="32"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="143"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="179"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="225"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="266"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="292"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="344"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="9">
        <location>
            <begin position="4"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="377" mass="41710" checksum="A5D43CB7990FA45B" modified="2025-10-08" version="1">MCDYVCVQLIKMTKKKNVETYESLAEQTLGGAMYYIICLFCFLSTFGAMMGYSEIIHSSNIALLGQFIKNDPEKLKWASLGVTIGLFFVFVMPYAYWKDLSSLSWMSVFSLVTFGVIAVIITVSGALVENPSSNYKPLATKGIISAFGTLSFAFVCTDSIFPVYLGLRDRTQLRWNKVMHTTVACLGLLYGVFASICYFLIPNLANYVLNSPSISGKIEVNVAKLLLNVTLLLTFLTKIHVTRTYLYSMIEKSLGPLSGISKKSFYILHMGSTSATVVVSITLGILTGDLMFIVSLTGLLTSTAIGYVIPVVILFKIKTFKKIWNDFKEAFTGNLKLIKRLKNVVNFLFPILIFVFGVVGFCVGVPLTIIGYIDGLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF88</accession>
    <name>A0ABV2AF88_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000319</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000045">
        <property type="protein sequence ID" value="MES1918340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="21357" checksum="BFDBC6E684B2FCCA" modified="2025-10-08" version="1">MTAAIVNFSPFLARFVSLSTTRNSFWLYNLTFLALSASKNERYFKNKFLNVFITALLSCCAPKFLKCERFSFGPLKPDFSFVTAFFVRENLSRFGDIDFQNSAHLRNSHRRSLFRTGLGQKNARGCYKRGSAGESEIFVMVSTQNQCFVDDVPFISELQRLRLASDDRVQLLHDISSAFNDRGVWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFH1</accession>
    <name>A0ABV2AFH1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000405</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000062">
        <property type="protein sequence ID" value="MES1918435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46181">
        <property type="entry name" value="MITOCHONDRIAL GLYCINE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46181:SF3">
        <property type="entry name" value="MITOCHONDRIAL GLYCINE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="13"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="95"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="203"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="262"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="287" mass="32565" checksum="585838F6FDE7A840" modified="2025-10-08" version="1">MQNNENKTKLDKVGSGLITGIFISTIFTPFDKALYLAVYNDRKFLDRKNFRRPLKGTLAGIAVRSLSNGMFFPLIDITESALLIKLMSEYPKTASFFAGNIAGLQLMAITINLGIAISVINNLTNTIRYKSWSSRKDISFTKTAVDMWKKGRIRPFFDGVSDLIMRDLIFGGVFALARKSLYSEFIEKRTKQPQTLNLFYKKLALNFIAGAAATIISSPFNYCKNVKYWTEPGEKAPSSTRILYDLFFERKTLSHLENRLQFFWGTLRVSMGIGLAAVIYDYILSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI5</accession>
    <name>A0ABV2AFI5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UBC core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000407</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000062">
        <property type="protein sequence ID" value="MES1918438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd23799">
        <property type="entry name" value="UBCc_UBE2J"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050113">
        <property type="entry name" value="Ub_conjugating_enzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24067">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="UBC core" evidence="2">
        <location>
            <begin position="12"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="24636" checksum="7C4EFC91E7E874C4" modified="2025-10-08" version="1">MHTKNQPLKLTTAVKRIMREMAEFTKIEGDEFNAGPLSMSNMFLWHFTIRGPSDSDFESGIYHGSISLPDTYPFSPPDIMFLTPNGRFEVNKKICLSISGYHPDTWQPSWSIRTVLTALRSFLVTKEEGAIGSLKYPSCERRRLATLSKDWKCSCCDVTMSQILKFKSLTKPENGCKTKIEKNGVKDKQFKFFDRNVAILSLIVFAIFVRRLIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFJ4</accession>
    <name>A0ABV2AFJ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000436</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000068">
        <property type="protein sequence ID" value="MES1918471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="84" mass="9912" checksum="A56E543FCCA69C78" modified="2025-10-08" version="1">MFESMIVDVRSEIYVEPTDEFILSCDDDKSDFILYGPFLVPKITLICNHRVLSIIQSPDTDFYQYGELSCLRFIVIHIIYFCYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFL3</accession>
    <name>A0ABV2AFL3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000451</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000069">
        <property type="protein sequence ID" value="MES1918486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="139"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="344"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="421" mass="49465" checksum="8E5335927397225B" modified="2025-10-08" version="1">MKIKNKTNLTNTIIFKNNIHNKINDHNFDFSRIIIEKVVDENSIKSDDFPDETSILIFDNKNREITPFKRYVLLQNKIKELRKKEYSKKSVNEQILKNHDTIILKLIEKKKLSRQRLLISKEKFKSNKRLKMIRKYKSLKFIQDKIQSLKNKQQKITDRKIHTKNAVSDIVNSVETNKKTVSSYQKQIADLSKKLDSHKNTLEEKLDAISDINDKRKSMSEYIDNCSIHSENRLNVKERKIDSIIQAMQFIAAQMQKLVNLSNYMRSSLDKSKEFANYFLEIFNKRKKQHNRLSCVEMTENAIAFVGSQQNNLTQIKKIGSEINRYLDDKLSNLGEEDPAKTDKAKFLRDSKKYENEIASLSKKKVEAEILIESETKINKKLIDQLNSENENEKENLKELERILKKTEKSLKMTSQANELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW2</accession>
    <name>A0ABV2AFW2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Ribosome biogenesis protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">BOP1</name>
        <name evidence="9" type="ORF">MHBO_000510</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000083">
        <property type="protein sequence ID" value="MES1918556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028598">
        <property type="entry name" value="BOP1/Erb1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012953">
        <property type="entry name" value="BOP1_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17605:SF0">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BOP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17605">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08145">
        <property type="entry name" value="BOP1NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM01035">
        <property type="entry name" value="BOP1NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4 7" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="BOP1 N-terminal" evidence="8">
        <location>
            <begin position="5"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="156"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1918556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="488" mass="56768" checksum="B2738564E25B02A0" modified="2025-10-08" version="1">MKIPKIKKIEKKQIPFSIWDVETEKNLSDYLPNFKLPTRFRPYQPPPKLKLPGTQESYNPPSNLLFDEDKIREWKEMDKEEREIDFVPQKLNSLTKIPLYKNSFEEVYRRCLDIFTKPRLSKQDLAKMEKKRKPKKIPKIDRSQFRPFPTKIGMRFDGHQCLVQGISLSCCGKWLASYDEKCNVKIWEIETGRCLKNLNFDQNAKSLKISFSSKNCFLLILIKYDQISRIDILDLNLLNDQNDKENVKSFFENITEFKANNDFANKFIENNQMKLTKNARNTTITINNQIESATWHPNNKHVAVTLNDSPFVAVVDLKKGLVQIPFKNLKPSKVLFAKKHKWLLVAIANSVQIFDFAESKKLCTLKCGQSHVNSMALNEAETQLIAGSADSYMYYFDIEMSLKPIRYSQHLRSIRSTAYHPKRPLFATASMDRKLFVFHSQVPDKFEDAEVVPLTYFEGEKGFLDCAFHPSQPWLLACCGDSVKLFID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFW7</accession>
    <name>A0ABV2AFW7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Peptide-methionine (R)-S-oxide reductase</fullName>
            <ecNumber evidence="5">1.8.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">MSRB5</name>
        <name evidence="7" type="ORF">MHBO_000497</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>L-methionyl-[protein] + [thioredoxin]-disulfide + H2O = L-methionyl-(R)-S-oxide-[protein] + [thioredoxin]-dithiol</text>
            <dbReference type="Rhea" id="RHEA:24164"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12314"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:45764"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="5">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the MsrB Met sulfoxide reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.12" evidence="5"/>
    <dbReference type="EMBL" id="JBDODL010000080">
        <property type="protein sequence ID" value="MES1918542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033743">
        <property type="term" value="F:peptide-methionine (R)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.20">
        <property type="entry name" value="Peptide methionine sulfoxide reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028427">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002579">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00357">
        <property type="entry name" value="peptide-methionine (R)-S-oxide reductase MsrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46081">
        <property type="entry name" value="PEPTIDE METHIONINE SULFOXIDE REDUCTASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46081:SF8">
        <property type="entry name" value="PEPTIDE METHIONINE SULFOXIDE REDUCTASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01641">
        <property type="entry name" value="SelR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="Mss4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51790">
        <property type="entry name" value="MSRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MsrB" evidence="6">
        <location>
            <begin position="7"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="14894" checksum="74B0740BC1CB4EE7" modified="2025-10-08" version="1">MAKKQTTKHWKAILSPNQFKILRLKQTEKPFTGQYLKHEEDGVYNCAGCNSPLYKSSTKFDSGCGWPAFYEGVKGAIETRPDKDGKRVEIVCGQCEGHLGHVFKNEGFDVPTNVRHCVNSASLLFEPTDKSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFZ7</accession>
    <name>A0ABV2AFZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000531</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000088">
        <property type="protein sequence ID" value="MES1918580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="67" mass="7412" checksum="557DEF1ADBB307DA" modified="2025-10-08" version="1">MSLFAPYRALGIVCNNVPISGENLGNDDFLTCAVGDTFHVYNVSIDNQRPKNSNWQILANPSLPKFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG19</accession>
    <name>A0ABV2AG19_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000542</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000091">
        <property type="protein sequence ID" value="MES1918595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="267" mass="30579" checksum="37A7D4BD8E456F96" modified="2025-10-08" version="1">MLYFRKKRKFACRTEYRTYTPEPKILPKMLSIPVENTFMAEFSGTSIELLNPLKMPDIKLGSTQTDLGTVFKPAPSNLSATLTKEQREVLYGPEKIKMTEKAIAEKSSKQSKKLHPESSNDNLKAIGNVDEYVSKCLKNPNNDRKAKIICSKPIFFREAFGEKEIKRVIFNDNVDKNHKFSLLHNRDDDNFGLYAKDKSNDGNYDLVSEYKKSNDGAAPPPGRKNVLIVGKNFADFVIIDSDLRLKRRPPTTYDFEEDQRLPPHLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGW0</accession>
    <name>A0ABV2AGW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">TRASH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000782</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic ribosomal protein eL24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000148">
        <property type="protein sequence ID" value="MES1918887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00472">
        <property type="entry name" value="Ribosomal_L24e_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.170.20">
        <property type="entry name" value="Ribosomal protein L24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038630">
        <property type="entry name" value="L24e/L24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056366">
        <property type="entry name" value="Ribosomal_eL24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000988">
        <property type="entry name" value="Ribosomal_eL24-rel_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023442">
        <property type="entry name" value="Ribosomal_eL24_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011017">
        <property type="entry name" value="TRASH_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10792">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10792:SF8">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01246">
        <property type="entry name" value="Ribosomal_L24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00746">
        <property type="entry name" value="TRASH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01073">
        <property type="entry name" value="RIBOSOMAL_L24E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="TRASH" evidence="5">
        <location>
            <begin position="6"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="20890" checksum="B229A750C90DD1CD" modified="2025-10-08" version="1">MRLEKCWFCSATIYPGHGMKFVRNDCTLFSFCRSKCHNNFKMKRNPRKVKWTKAYRRIHKKELPDDPLTEFAKKRSKPVKYNPNVVGKTLKTIERVKSIRVKKEQRYNKERTKKAKMQEKEHKLNFIDSHLNLIAAPKILGNGDLNDKRKNALKFLRDRRRKREEKIAKIEKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH74</accession>
    <name>A0ABV2AH74_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Sushi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000551</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000093">
        <property type="protein sequence ID" value="MES1918607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="91"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="47"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="116" mass="12845" checksum="025C5E1C9F6B0211" modified="2025-10-08" version="1">MYKLVCNDMFFVLEKGNLVKSLNLKCEEGEWQVPVCLPKSQIKAQSEATENTNKKLGNPSKDKTMSGTKKDLAPVSKPKVAKKKTVSNCFFFYNLAASSAFSKMALLSILAMALIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH90</accession>
    <name>A0ABV2AH90_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Coenzyme Q-binding protein COQ10 START domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000920</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with coenzyme Q.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the COQ10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000186">
        <property type="protein sequence ID" value="MES1919046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044996">
        <property type="entry name" value="COQ10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005031">
        <property type="entry name" value="COQ10_START"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12901:SF10">
        <property type="entry name" value="COENZYME Q-BINDING PROTEIN COQ10, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12901">
        <property type="entry name" value="SPERM PROTEIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03364">
        <property type="entry name" value="Polyketide_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Coenzyme Q-binding protein COQ10 START" evidence="4">
        <location>
            <begin position="44"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="24173" checksum="C9C3259EB8726886" modified="2025-10-08" version="1">MLWKHRNLRKQLSKPLGSKLNRKISLSSESKSYLHKESDIFRQPPETVYSVFSKVGNYRHFLPLLSRSVCEKAPINAKRPIIKRTPFIKIPTNSEHYLCDMAVGIAGLQENYKADVFTKPFTDIVSIARETETIEYLDTIFKLEPVSKENFCLVNFECRFKFKSPALNLATDYLFHVISRELLSKFKKECRKNSLIKINFCCCNYNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHJ1</accession>
    <name>A0ABV2AHJ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">26S proteasome non-ATPase regulatory subunit 1/RPN2 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001005</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000209">
        <property type="protein sequence ID" value="MES1919141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048570">
        <property type="entry name" value="PSMD1_RPN2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10943:SF2">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21505">
        <property type="entry name" value="RPN2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="26S proteasome non-ATPase regulatory subunit 1/RPN2 N-terminal" evidence="2">
        <location>
            <begin position="5"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF21505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="305" mass="34273" checksum="606C665FD1E327F5" modified="2025-10-08" version="1" fragment="single">MPLSSVSGLISILDDSASQAQLYALKAIHDLIDRLWPEIASYLPRLKKFTDTNQNFPDKDLVFSIFSRIHYHLKDTALSFEYATNAGKYFDPSDNTLYSQTLIEYAIGTFLRHSNNVHNHRESALNPHISSIILDYADRMVGKGDFSGVIGLATESSNPQFFMLSLGNCLKAVTEKHLKRQIFEIALESSHHAAKDVRPILARISTFYGVRFGVISPLEYADLRIKNGAAEELTDLLTALISGFEVNPYLLSKEVELLNNCQKGIHKIPKSEIVSVNSKEVGSIEIRDMNEDPNIFSEYELFALQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN3</accession>
    <name>A0ABV2AHN3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_001054</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000221">
        <property type="protein sequence ID" value="MES1919191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF702">
        <property type="entry name" value="AMINO ACID TRANSPORTER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="189"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="213"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="7">
        <location>
            <begin position="68"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="10"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="249" mass="28006" checksum="CE2BE7E6DA234BFF" modified="2025-10-08" version="1">MEDTLTNSIPKDKKTSDEKTLSNKEDLDKIQSNENSTNDDIESLNGDQNISRFQKDGHNVSKKDHILSIINAVVNYINTLVGAGIIALPITFALAGIVFSILISLVCALLIFYTADLMIKVSLKLKKTRNIQINSYSELAKATIGSWSQHLVTILILLLMFFLMSIYAIILRKSVKSLIEDFTGKVFRYDKLVLLAIIAPVFLLCVQRNIKNLGYTSSLSACLVVFFMIVIIIRSPYYNKLVFFLNLDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHN7</accession>
    <name>A0ABV2AHN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">USP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_000682</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000121">
        <property type="protein sequence ID" value="MES1918772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050185">
        <property type="entry name" value="Ub_carboxyl-term_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646:SF86">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="USP" evidence="2">
        <location>
            <begin position="43"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23049" checksum="6847E8926EBD6E7A" modified="2025-10-08" version="1">MVKKKKSKRKDYKEERQQLSKRTSDRSSISELQEIQPIPNHYIGLKNQGNTCYLNSVVILDNQKLQCLIHCVPLRKKLADLEESERREQSKGEMGDVLMKTLFEYERKRKGHMSPKLLLNAAAQRNYAFRGTSQHDAHEFLCVVLSALSDDREKDRDAYCAELATKSNFDNLSSGNLDCTRLSDLDGLHRNKSICKGTGTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHP6</accession>
    <name>A0ABV2AHP6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Protein transport protein Sec24B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">SEC24B</name>
        <name evidence="12" type="ORF">MHBO_001059</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SEC23/SEC24 family. SEC24 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000223">
        <property type="protein sequence ID" value="MES1919196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1670">
        <property type="entry name" value="beta-sandwich domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.730">
        <property type="entry name" value="Sec23/Sec24 helical domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.380">
        <property type="entry name" value="Zn-finger domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012990">
        <property type="entry name" value="Beta-sandwich_Sec23_24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006896">
        <property type="entry name" value="Sec23/24_trunk_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050550">
        <property type="entry name" value="SEC23_SEC24_subfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006895">
        <property type="entry name" value="Znf_Sec23_Sec24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036174">
        <property type="entry name" value="Znf_Sec23_Sec24_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13803">
        <property type="entry name" value="SEC24-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13803:SF39">
        <property type="entry name" value="SECRETORY 24AB, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08033">
        <property type="entry name" value="Sec23_BS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04811">
        <property type="entry name" value="Sec23_trunk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04810">
        <property type="entry name" value="zf-Sec23_Sec24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81995">
        <property type="entry name" value="beta-sandwich domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="vWA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82919">
        <property type="entry name" value="Zn-finger domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="6" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Zinc finger Sec23/Sec24-type" evidence="9">
        <location>
            <begin position="140"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="Sec23/Sec24 trunk" evidence="10">
        <location>
            <begin position="216"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="Sec23/Sec24 beta-sandwich" evidence="11">
        <location>
            <begin position="467"/>
            <end position="555"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="14"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="14"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="34"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1919196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="841" mass="92906" checksum="60DD08A373CA493E" modified="2025-10-08" version="1">MSFHGNFAHMELAYPEKDSSSDAESHLPKEKNSAFAQSAESRPSLPSSRFSAAKLNASESRSDAFGYTPSNTKAGERRLKPKWLKQIKKCPDDFISASHGSFPMSRSALKSVGTDFCVHVECMPAEKDRVPIVDCGNSAIARCSKCRVYINPFAVFVTGNSWICNMCQTHNKVPPQYKGSLDSEGMRSDRLKRPELHSCYYEFIASNEYYYIDRSPQSPIFVFVIDVSTEAVKSGMLALIGEAVPPMIEQLAGDKRAQVAVLTFDRALHFYKLGSEGSPPKVTVSPDLANPIARTPDKMLVRLSENKNAICDLFRSLEKIHAETRDGDSALGDAMATVKNVFAPVGGKICVFSAATPSVGVGRLHAKMAKPKDKKEVKDSLRAHLIDNSSFYSEHARSMNERFLSVDVFKFALNHKPMGCGSLGALSHLTGGSFKLYEVRPGVEEDFGSLLQRLSGDLRNSLLRPIAWDAVMRIRASHKLLKKELLGDFDLKKSDLMSFPVAVGRKTVSMTVKFDDEEEDRMIFDNFVFFQSALLFTSQNGDRRIRVYNLAVPVTNSAPKVAQSVNTAAFLAYIAKMAVSKCLDIGFETGRNFIQSAGMALIRRLALSTGKAVRSAEDLPPKAREMAAALVGLLKSEAFCDAAKDPVPTRFSEESRVFVSPIRRFQRLCCLRGAPVASAQLFARPLVFPLLDVLLSEDYPEDPDKVVDVINANAMKLNSLALVASGVLVISDGQRLIFRVKKDSDSEILEALFGVSRIPADGSLSLISFAESESVLADRLGEVIGFLRKISYSKWLVPEIMVESQNVDRLCAAYLYEERSETVMSLDEFLKYIVKVINTSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHR8</accession>
    <name>A0ABV2AHR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Carrier protein, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">MTM1_1</name>
        <name evidence="13" type="ORF">MHBO_001070</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000226">
        <property type="protein sequence ID" value="MES1919210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045315">
        <property type="entry name" value="Mtm1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45760">
        <property type="entry name" value="FI19922P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45760:SF2">
        <property type="entry name" value="FI19922P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="9"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="143"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="239"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="MES1919210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="333" mass="37149" checksum="5A263440B4E08DB9" modified="2025-10-08" version="1">MSKISNSTANLHERIFAASFGAFLCTLAVTPFDVIKTRLQVINFHLKAKTLSCSKKALEQCETCYPPQSAPKKQSPLQNLKFRSMRCYSHVKGPLQTFSFIVRNEGFFALWRGTSASLLFSIPSSALYLNFYEALRSSKFGSGDNAGPIFSGICARFITTAIMSPAEFLRTRTQSKPGHGGGSRYCTESITSQVRRNGIFHLWRGAGSTLARDVPFSALYWFGYEKLKSFYGNVLPKESPSLISFCSGASSGAMAAFLLTPMDVAKTRIQMDGSKEKTRAFEVAWKILRREGIKEVFRGAVARMLKIPIACAVMISTYEESKRRFAKRRLNFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHS3</accession>
    <name>A0ABV2AHS3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001086</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000231">
        <property type="protein sequence ID" value="MES1919226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8665" checksum="3A681A7F57C4232F" modified="2025-10-08" version="1">MLVSPIPLVYVPTATATKASQFEKGLTQHWSYGEKRYEQKKMLDMLFKWKFFKKGRELIILGGYFNDEIYKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIB7</accession>
    <name>A0ABV2AIB7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000983</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000203">
        <property type="protein sequence ID" value="MES1919118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="142" mass="17070" checksum="40A88E89FD262A63" modified="2025-10-08" version="1">MLKLIKFRVNGGTNAFKILNNSVRSKTNQRMLKARLDAKKRLKLRARLNSKKKKQSRIDKLSSIRPDEMTMRQMYRELAYKKCWPIKGLLDKAQLSNLVKSRRITEKKEQEKLKMRQNKNAEKLLKERKLGYYLYLKRKRTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIH8</accession>
    <name>A0ABV2AIH8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001103</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000237">
        <property type="protein sequence ID" value="MES1919244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="144" mass="14853" checksum="ADA21669B1F84BEC" modified="2025-10-08" version="1">MTPSLGKTDNNSRESGDASIPATALAEEATRAVRVPAVAVEVGQRTEGAAAGATVRVGALGAGPEIAITAGVRAVGLPAHTAKVDPKVARETAKKVQVDPKVARETAKKVQVDPTKEVAAKVSAQIERIKEQKATITKMEPKLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIQ4</accession>
    <name>A0ABV2AIQ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Thioredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001366</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the thioredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000325">
        <property type="protein sequence ID" value="MES1919556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46115">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000077">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00421">
        <property type="entry name" value="THIOREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="11688" checksum="ADBC5DD448839A75" modified="2025-10-08" version="1">MVEHLNSLEHFNQLVAPEDADLVIVDYYADWCGPCKAAAPIFEEMAQTHKTAKFYKVNVDKAVDLAADGKISSLPTFKIFKNGVLVGTVIGFDKIKIEKHIAEHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIU8</accession>
    <name>A0ABV2AIU8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001411</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PP2C family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000340">
        <property type="protein sequence ID" value="MES1919611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039123">
        <property type="entry name" value="PPTC7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12320">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12320:SF1">
        <property type="entry name" value="PROTEIN PHOSPHATASE PTC7 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13672">
        <property type="entry name" value="PP2C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0464">Manganese</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="2">
        <location>
            <begin position="41"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU366020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="293" mass="31638" checksum="1FAA6018586E8084" modified="2025-10-08" version="1">MSLPAFFNPLKFVSTHAEEPSSSDKLLVFESQSYSIAHPTKTSIEVDIASVVNNNEISDKSLFITGAGEDSLLRLDNVLAVADGVGGWAFHQNGNSALYSRLLVHFLAKRLPLDKKDGIYFDIQKAIRKAHEDTNKKEIMGSSTLCLCALEGNKMTVANVGDSGFILVRDGEVVLHSSEQTIGFNCPNQLGPNPNDTHPCDFYSTSVIPGDTVVLFTDGVSDNMFKEEIASIIRGMTSTKNAAETIAKMAKNLSESSRKSPFQISASESGIEFDGGKPDDITVIVGVVSEKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIZ7</accession>
    <name>A0ABV2AIZ7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000351">
        <property type="protein sequence ID" value="MES1919639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="33093" checksum="03D2BDCCE1A5CBBA" modified="2025-10-08" version="1">MQLKGLVQLKLFNFVNNTPGFSKFSLSFLQYPEILFDITFKKRKLKLNTLPVISNMIHKLLKKSVWRVMVYPRSITININKTKLNLKRNVGSLVIDGKSYREVEGYVKVKILKLELREDCWFNNILNVTGETMVDWYCTVFSKGDKLIYNTDPIKADVWRKKFRWEQFVTLKNFTIGQTRKYGHVVNIELWVSSKRHKFLIGQISIDLMPLISQERFWYNILDEKMYQFSSDDVSFDIIGLASIKIEYKPPKKLKLPKYLSTTTIPNKIDRIRRAAFKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJR9</accession>
    <name>A0ABV2AJR9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001654</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000440">
        <property type="protein sequence ID" value="MES1919909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="119" mass="14070" checksum="8E33193088EEF7AF" modified="2025-10-08" version="1">MSSPFTGILSLRKELNVSFLCYNRIVSKVFRNINKNRNALKESIVRYDYDILDSEGRTVRSKSVDNRSQIKNKIDNYFFILMSFVHFLQIKNNKICDKIFNIFCPICTCNKSTFRYFVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJT7</accession>
    <name>A0ABV2AJT7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Elongation factor 1-alpha</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">EF1a-F2</name>
        <name evidence="8" type="ORF">MHBO_001668</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000445">
        <property type="protein sequence ID" value="MES1919925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01883">
        <property type="entry name" value="EF1_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03693">
        <property type="entry name" value="EF1_alpha_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03705">
        <property type="entry name" value="EF1_alpha_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054696">
        <property type="entry name" value="GTP-eEF1A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050100">
        <property type="entry name" value="TRAFAC_GTPase_members"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004539">
        <property type="entry name" value="Transl_elong_EF1A_euk/arc"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00483">
        <property type="entry name" value="EF-1_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF008969">
        <property type="entry name" value="PRK12317.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23115">
        <property type="entry name" value="TRANSLATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22594">
        <property type="entry name" value="GTP-eEF1A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="7">
        <location>
            <begin position="6"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1919925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="439" mass="48527" checksum="49BD1CD668CE0287" modified="2025-10-08" version="1">MSKKELPNLNIVIIGHVDSGKSTTCGQLIANLGKIDQRVLDKYAKEANEMGKGSFKWAWVMDNLKAERERGITINNSLNELFTKTKKITIIDAPGHRDFIKNMISGTSQADAAILMVSGAKGEFEAGISENGQTKEHAMLAQTLGIKNFVVCINKMDTTIGLKGKEFDKARFEEIRDYLSDFLVKLNFAKENFTFVPISGFDGDNIAEKSTRCSWYKGPTLAAIMDDIKIPKRPIKKALRLPIQSIFKIAGIGLVASGRVETGVMTPGMQVVIMPLNKKSEVKSIEMHHAPIPKAFPGDNVGFNIKNVEYKSVKKGMVVGDANNNPPKEAKSFTARLLVLNHSGQIRVGYSPVVFVHSAHVTCKISKIQQSFDRRTGKTIEENPDFIKKDMGAIVEFTPERPLVVESFKKFSPLGRFSIRDSKLTVGVGVIMSVDFTEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJY3</accession>
    <name>A0ABV2AJY3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Eukaryotic translation initiation factor 5A-1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">EIF5</name>
        <name evidence="5" type="ORF">MHBO_001715</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000466">
        <property type="protein sequence ID" value="MES1919978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045196">
        <property type="entry name" value="IF2/IF5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002735">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016189">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003307">
        <property type="entry name" value="W2_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23001">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23001:SF7">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01873">
        <property type="entry name" value="eIF-5_eIF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02020">
        <property type="entry name" value="W2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00653">
        <property type="entry name" value="eIF2B_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00515">
        <property type="entry name" value="eIF5C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100966">
        <property type="entry name" value="Translation initiation factor 2 beta, aIF2beta, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51363">
        <property type="entry name" value="W2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="W2" evidence="4">
        <location>
            <begin position="193"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="145"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="145"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="176"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="187"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1919978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="367" mass="41426" checksum="8D3C65C90B410DE3" modified="2025-10-08" version="1">MLNIGGQSNDESYRYKMPPIKSKKEGRGNGIKTAIDNIVDISKCLNIDPIYPTKYFGIELCAHSSFNKKTGRSVVNGYYDNDKMQKTLFNFIEKFILCDSCHLPEVVILVDKKRAKVAKKCASCGIKIKVDPLHKLTSFIAKKPPSYKKSHLRKKPETHKQSQPEKQTIAQKQNDDSDWDDDIDSEDGLKNDDERDAAPAKFYKNSLTENEENTSILEDMLSENASVDQLMAEVGRMELASPSGKILGKLVILQGVIQAMFGGAPKESNRSVLAIIEKQRDFLSELMAADERNPANFLVALEDLVRNKRSDLLKGLPMFLEKLYDLEILGEEEMIKWFENVEDDDKVSLSCGVFVDWLKEAETEESG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK10</accession>
    <name>A0ABV2AK10_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Ubiquitin-40S ribosomal protein S27a</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ubi3</name>
        <name evidence="9" type="ORF">MHBO_001574</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the ubiquitin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000407">
        <property type="protein sequence ID" value="MES1919809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002906">
        <property type="entry name" value="Ribosomal_eS31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038582">
        <property type="entry name" value="Ribosomal_eS31_euk-type_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01599">
        <property type="entry name" value="Ribosomal_S27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01402">
        <property type="entry name" value="Ribosomal_S27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="Zn-binding ribosomal proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="8">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="71"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1919809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="153" mass="16745" checksum="6FC6F93FDEDD3B28" modified="2025-10-08" version="1">MRVYANLFDGSTIAIPATLFAPVRSLEASIAEKAALKLGSFSLSVAGRKLSADQSLLNSGIADSTTIDVSASLNGGKKKKKKSKSNPKKGKHKKRKVKQHILQMYRIEKDGSITRTRRKCMNDTCYPTTFMARHADRHACGKCGTSMPLDDDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK27</accession>
    <name>A0ABV2AK27_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_001714</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000466">
        <property type="protein sequence ID" value="MES1919977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050611">
        <property type="entry name" value="ABCF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211:SF14">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211">
        <property type="entry name" value="ATP-BINDING TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ABC-transporter extension" evidence="5">
        <location>
            <begin position="3"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="111"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1919977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="235" mass="27494" checksum="81491A427C8BC0BE" modified="2025-10-08" version="1">MYHKKLSYYKGDYKSFEKVYKENLMNQIKAFEAQQKQIKHIQEFIDKFRYNAKRASMVQSRIKMLRNMEKKEEVSKDKKFKMVFPAVEPLSKEIVSLTNVYFGYNKNDILLKDVDFVIQCNSRIGLMGANGVGKSTLLKLIMGFYQPLKGKVEINENAKISFFTQHHVDSLDLEKSALENITKQFEDEIPEQIDNKAEYCRKRLGRFGISQDLATRPLRHLSGGQVIKINFLKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AK76</accession>
    <name>A0ABV2AK76_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001626</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000429">
        <property type="protein sequence ID" value="MES1919874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="15828" checksum="05BEE89B75C0F694" modified="2025-10-08" version="1">MAISDISESTTETCTFKSKEFTYQASFYNTIENSCIFILPENTEYLAPYPKNQKFVFGNGPVLVKCVKGAHVENADEIAYKMECENGVVSNKNCVFGILESEKVVDSEEYIPPLYVIVFMPFTALFMGVGSFRILVRLNSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKC7</accession>
    <name>A0ABV2AKC7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001662</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000443">
        <property type="protein sequence ID" value="MES1919919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="150"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="317" mass="36134" checksum="13025F03250908DC" modified="2025-10-08" version="1">MSFSTKSFKKSKVLKENIKMKTEGKSPNALSTNAQKSSRIAINSAFENINSVLESILEKFASEKPIPFPPENTFSLIDKKAYTKLLDENKRLREKIKKSEEKSAKNAKGVNLSIESNDELKFDLTETTSKIDQKSRKTTDSTGEINLKILIEKESAIRDLRFKIDHLQSENKKLTEQKLILQRIGQPAKNETLRTIGKSANIYGPKTQRYFKKSKEKLPAQNSLWKPRNSVVGHKKESTDKFLLKNGKTATKKPLIITNEKAKNFERSVSEPRSKIQAKPYKTPVRSSIKKRLKFAKASDDAILSTIKFKKTRVFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKD1</accession>
    <name>A0ABV2AKD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CCR4-NOT transcription complex subunit 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">CNOT10</name>
        <name evidence="2" type="ORF">MHBO_001836</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CNOT10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000519">
        <property type="protein sequence ID" value="MES1920120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039740">
        <property type="entry name" value="CNOT10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12979">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12979:SF5">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="166" mass="18929" checksum="61194FA865955BDE" modified="2025-10-08" version="1" fragment="single">YFEQSLILISKTNSLEWVKRDALLNLTAACYFSEDFVGAVHHAQKFLALKDIKETDRCLAALYSNESFCRLGKINEALKMLNPSKFANYDDFEREKALIYNNLACTYIVKGDLDRARICVDKALTCEGGLTSANNPDHKFKLNAYKNGQFLESIPIFEKEYYIIGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKF4</accession>
    <name>A0ABV2AKF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001854</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000528">
        <property type="protein sequence ID" value="MES1920140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="14089" checksum="91BA889DB0DCD7B4" modified="2025-10-08" version="1">MVVNAFRFGKLSQKIKFSFSKKFSAAAVNSSLMSSFKKIGLRTVSNISEISPSSILLLGRSECARLGLLRILETVPTAGETNIFEGMEDEDEGFTFFLNLSKFAIFYKIVCSSLVQNPKISVLCSSID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKH6</accession>
    <name>A0ABV2AKH6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001871</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000535">
        <property type="protein sequence ID" value="MES1920165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="139"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="150"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="27254" checksum="98B6E0DE6BC0712B" modified="2025-10-08" version="1">MVVTQNRTIESLLRDLKEIQIACVGEEKETDSKLDDFQKAKLDLSENLMRIKNDLEFAEKNPDKKGDLVRVKLRAQKDFETAAKCKKQLEKAIRKNERDFSKNYKRKKLTVEVMEERREVYALLTKDFNYVESVLKRKAEMPKMKSGAQTEREKRLQERKEKLRKKKKRGESDDDDYGEERMLTKEEQIFLQRSLENDRKIDEELEVVHDQLVGLGEKAKDINVVILKFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKJ8</accession>
    <name>A0ABV2AKJ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Trehalose synthase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001907</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000553">
        <property type="protein sequence ID" value="MES1920216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049438">
        <property type="entry name" value="TreT_GT1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21269">
        <property type="entry name" value="TreT_GT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Trehalose synthase N-terminal" evidence="1">
        <location>
            <begin position="15"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF21269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15502" checksum="4AA1078CA335E6AA" modified="2025-10-08" version="1">MIAVNNFSRMENRKLFQQYDVIWIDDPQPLGMIPMIKVIHPEIPLLWRCHVHADPEPSIRTYLSEVLEGVFNVDTHKIIHKFMLEKFNLDMTKLVKEKLRVNGAIFHLKEFAKGLKLSNEVPVFIMGPVFYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKU6</accession>
    <name>A0ABV2AKU6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">RanBP2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_001981</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MINDY deubiquitinase family. FAM188 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000593">
        <property type="protein sequence ID" value="MES1920296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.380">
        <property type="entry name" value="Zn-finger domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025257">
        <property type="entry name" value="MINDY-3/4_CD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039785">
        <property type="entry name" value="MINY3/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001876">
        <property type="entry name" value="Znf_RanBP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036443">
        <property type="entry name" value="Znf_RanBP2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12473:SF17">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE MINDY-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12473">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE MINDY-4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13898">
        <property type="entry name" value="MINDY-3_4_CD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01174">
        <property type="entry name" value="DUF4205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90209">
        <property type="entry name" value="Ran binding protein zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01358">
        <property type="entry name" value="ZF_RANBP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50199">
        <property type="entry name" value="ZF_RANBP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RanBP2-type" evidence="9">
        <location>
            <begin position="361"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1920296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="468" mass="53219" checksum="DE7E201ADF6778A4" modified="2025-10-08" version="1">MLENFIENDLYSRINKVLFGAENSEKKNLHVWHNSAFRFSEITPFTLLQTQGGVCGVLVAVQAFLLKHMIFGENGTKNLQNLTIGKIYDCFANALTDIIVICHGENAKEYNLVIPKSFDGQPLNGENIRNHLILTKLKTKEILKSQIKSELDSFRNGPGILALVCSAILGRGIDNVKKDMDDPNDFLIRRECYCTQELVNLLISGRAASNVFDGEKRLGDNGNDEYVLTGIPERTDIGFLTILEAQGYTKVGEYYKTPKYPIWVVGSNDHYTVLFSTEDKLVLLSKDEELELGIRRIFNSFDQFETGYLDYKSLPELLQKLRLNKVQTAFVESQLIKNKDSEVFLLQQLINAAMDSIKEFWSCPKCSFANSNEDSRCQTCQTEKESSVFERDNKESSNKEPLKTAELWHYNGMKLPGKNSGKLSELKIYFDHGYNLAQVGDNLRAVIHTKWPDSHVEFIKGTEKEVFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW3</accession>
    <name>A0ABV2AKW3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">eIF3a PCI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_001996</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000605">
        <property type="protein sequence ID" value="MES1920313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027512">
        <property type="entry name" value="EIF3A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054711">
        <property type="entry name" value="eIF3a_PCI_TPR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14005:SF0">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14005">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22591">
        <property type="entry name" value="eIF3a_PCI_TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eIF3a PCI" evidence="4">
        <location>
            <begin position="15"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="eIF3a PCI" evidence="4">
        <location>
            <begin position="130"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF22591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="231" mass="27365" checksum="2DEB157B8857F600" modified="2025-10-08" version="1" fragment="single">MPIKYNRYLDINPNDTLQRANEFIKLNENISAFETIDNFLNQRKISRATFVDGFETMIESYLGLCFDLRFSPKDGLRRYRIVCFQSSTPNIYLRRVYESLLTRLSNFGIEAVRNLKIKFKSNFVSKQYYSEKLSFQWDCYLSVLDNIKFIPDLITLYSETTEEAIDFCRVLRRPHELQKLHGTINAHFLSFLRYQGKKDSIDIGDQKTLKIFISLRFKILSAFSECGEFRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW5</accession>
    <name>A0ABV2AKW5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PDHA1_1</name>
        <name evidence="5" type="ORF">MHBO_001997</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000606">
        <property type="protein sequence ID" value="MES1920314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050642">
        <property type="entry name" value="PDH_E1_Alpha_Subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516:SF60">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Dehydrogenase E1 component" evidence="4">
        <location>
            <begin position="47"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1920314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="150" mass="16581" checksum="1298F7F1F6087894" modified="2025-10-08" version="1">MFSKSVSLRRFGTSAMLKCSPTKAHKCLHPKSTIMVHKNELLQYFENMNLIRKMEIKTDSIYKSGLIRGFCHLYDGQEAVAVGIEAGIKPSDHLITAYRCHAQQLLRGDSVRGILAEMLGKKTGTSKGKGGSMHLYMPQNNFHGGNGIGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW8</accession>
    <name>A0ABV2AKW8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">U6 snRNA phosphodiesterase 1</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">3'-5' RNA exonuclease USB1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">USB1</name>
        <name evidence="7" type="ORF">MHBO_001964</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000581">
        <property type="protein sequence ID" value="MES1920277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1140.10">
        <property type="entry name" value="Cyclic phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027521">
        <property type="entry name" value="Usb1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13522">
        <property type="entry name" value="U6 SNRNA PHOSPHODIESTERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13522:SF3">
        <property type="entry name" value="U6 SNRNA PHOSPHODIESTERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09749">
        <property type="entry name" value="HVSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="19616" checksum="78F9CDCDE52EA8CE" modified="2025-10-08" version="1">MRIIKQAFCTFVNEQNQNLRKSFHITKLNEFHISLSETFVLRLHEEDRFVKKLNLETYKKFNKEKIFLDENISFFANSDKSRTFIAIKILHHEFIDQIITKTNKTVSQFRGQIINKKNFRPHVTIGWILGDKTTTLKNTNFNNSFSFKAHVEVKIGKRVFNCNDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL19</accession>
    <name>A0ABV2AL19_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Snurportin-1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002004</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the snurportin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000609">
        <property type="protein sequence ID" value="MES1920322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09232">
        <property type="entry name" value="Snurportin-1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.30">
        <property type="entry name" value="DNA ligase/mRNA capping enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017336">
        <property type="entry name" value="Snurportin-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047857">
        <property type="entry name" value="Snurportin1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13403:SF6">
        <property type="entry name" value="SNURPORTIN-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13403">
        <property type="entry name" value="SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21974">
        <property type="entry name" value="SPN1_m3Gcap_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56091">
        <property type="entry name" value="DNA ligase/mRNA capping enzyme, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Snurportin-1 m3G cap-binding" evidence="11">
        <location>
            <begin position="91"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="48"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF21974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="386" mass="44573" checksum="0A3694E55AAE5793" modified="2025-10-08" version="1">MDEILKNKNSIKGFVDGWRNKRKQSLFAQQNEQRQEKLEKMRTLFATPFNNQNNQNNKNNQNNKNNQNNQNSKKSTNRIAKEGNKHVSEAFMVSEWMLDVPKDLGTDWLVYPLPTGSHCLVTASNGATFSHRVSGHRFQQFFKSLLPGGNPDNPSPFTQLDCIYNHETSTFFVRDLLYWNSVSFVNCDAELRLSWIRSKLAEKQYQNESNQNRFAFCAAPVSDCSPTNLKSAYLWPDSDYRLAESVERGLNPEVFVRGLSSKESSGRIDRDGLQFIHKNSIYVQGPNALLLKWKDSTSKYFIDDCEEKIITLKITKNKIYTFDKIEVINDNLGDNLEEQIGRFKYDQILIQRTKETKIAVKFENLVYLGESKVLKLFLEVESTVTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL67</accession>
    <name>A0ABV2AL67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002066</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000643">
        <property type="protein sequence ID" value="MES1920390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="16"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="348" mass="41334" checksum="8025C8C604A7DAFD" modified="2025-10-08" version="1" fragment="single">FFDNNKIEKTKNENLKFIQNEKIENAKNEINKIEEKIDKNEKEKLEKDVIELGFKTFGYNKKVLSPKFESSSSYSYETSEENLDKLNEKDFKENVDSKTNFDLLHENAFKTINFVNNKIEFIEDGDIFQTNFKNIEKNEQIKKEYENNLIESIEKMNEIFDKDKKAKNQKLDKFSNFVQIVDTNIKNFNKEIMKIEDLNSRDFVVRKIFVHLLLTKDNLEKRKSKIITIFSHREFVKIFIDSLTFVSPLFLPLFDRNSVDSILAIRSKNLDDFKTVLKNVIEILASLQNFDEIKRFSWKWLSLIANGRNVHMFVLKLCLLFLQVSKSKLLEFEQKRQTNLQIGPIFQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALX7</accession>
    <name>A0ABV2ALX7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ribosomal RNA large subunit methyltransferase F-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002000</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000607">
        <property type="protein sequence ID" value="MES1920317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010286">
        <property type="entry name" value="METTL16/RlmF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13393:SF0">
        <property type="entry name" value="RNA N6-ADENOSINE-METHYLTRANSFERASE METTL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13393">
        <property type="entry name" value="SAM-DEPENDENT METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05971">
        <property type="entry name" value="Methyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="184" mass="21644" checksum="962E706DDBDE260A" modified="2025-10-08" version="1" fragment="single">GTGASCIFPLLGHKKFGWKFIATEIDSNSIKWANKNIMTNKLDKWIKVIKIEKSRKIFNFLKTCSKKFDFSMCNPPFFEDMKQVGNNKKRVFKFYKKITKATQKELVCSGGELAFITKMIKQSLKIQNKIRWFTTMVGRLKTFKQILEKLKLVKKESNLIIKTAVLRKGRQSRWFVAWSFEQNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM16</accession>
    <name>A0ABV2AM16_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SET domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002371</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000829">
        <property type="protein sequence ID" value="MES1920730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050869">
        <property type="entry name" value="H3K4_H4K5_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12197:SF251">
        <property type="entry name" value="EG:BACR7C10.4 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12197">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SMYD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SET" evidence="1">
        <location>
            <begin position="3"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="505" mass="59042" checksum="DD35E2B2369EB7F7" modified="2025-10-08" version="1">MAKNISKTNSSVGGYGYIIKCAISEGNLILSEKTKFIVPLFRNITFRDSGKNLYFCSNCFKIKEIKFYFECECQNCLDQFSFCSKMCRDANLDLHSIICSKNNKFGQIAPDFLLSIKMALEDFESDFFEHLIDKSKKSEQKDKIEYFSKKIANLKFVDDKSLKLDEKALEIQNNLEKICQIVKKCCFALKLPVFDEYPYALSIFPKSSLFNHSCDPNCHVLFEENKIKFYSLKKIFFGEELTFSYAQNIKIANLNKRLTFLKQNFDFDCLCSFCCNNKQNENSENDEQNENLINQSSDIQAPKPSYIEIYSKIDQILIENGNKKDCIEAIKQILDQIENEKILKSKIFSENSQNGQNLEIVDKIANIAILTKQWSIGYKTTKMALQILKQFFQTSKNPKNKKIYLKKKKENPKREQNKISFYPLLELKMRILLILFKSLNIKTENEYFEAENEMFEEAEKARVLLKKYYGEDDWKKVLDILERVHRGFCSVTKIIDSVDGYFGYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM25</accession>
    <name>A0ABV2AM25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002357</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000820">
        <property type="protein sequence ID" value="MES1920716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15112" checksum="EC6D5337F78270A7" modified="2025-10-08" version="1">MSIEIKPKIINLGKNSNIKIEIQNFGKNPKIWKIFSTDKENKLFLSPIEGLLLSFQKDIISLHFKRPTKSNFCSKEKILIQSFGISYERLNKKFEEKSNFLENIFEEEKNDAPNIEKRIIFTNIIKLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMH3</accession>
    <name>A0ABV2AMH3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">60S ribosomal export protein NMD3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002178</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the NMD3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000713">
        <property type="protein sequence ID" value="MES1920512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039768">
        <property type="entry name" value="Nmd3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007064">
        <property type="entry name" value="Nmd3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048899">
        <property type="entry name" value="NMD_SH3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048898">
        <property type="entry name" value="OB_NMD3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12746:SF2">
        <property type="entry name" value="60S RIBOSOMAL EXPORT PROTEIN NMD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12746">
        <property type="entry name" value="NONSENSE-MEDIATED MRNA DECAY PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04981">
        <property type="entry name" value="NMD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21193">
        <property type="entry name" value="NMD_SH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21192">
        <property type="entry name" value="OB_NMD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5 7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Nmd3 N-terminal" evidence="9">
        <location>
            <begin position="2"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="60S ribosomal export protein NMD3 SH3" evidence="11">
        <location>
            <begin position="75"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="60S ribosomal export protein NMD3 OB-fold" evidence="10">
        <location>
            <begin position="140"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="264"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="280"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF21192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF21193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="36716" checksum="7A3BA835B0E8018A" modified="2025-10-08" version="1" fragment="single">MLLKQGLAENITGMKEVPEGLNLYFENKSLAANLVDFLVSVVPIRRDESKRLISQDFHSNITKYKYTVAVEIAPICREDIVFFDNKNLSKKLGGDSPFLICVKVTNQLTFVNPFTLHRVKITPAEYFKNRLEVLCNSRSMVEFLVIDVRFLPKAKEPKGTKYRKAAIECVRSEDVNEPENYIEIDSHLGNILRPGDLCLGYDLRTLNLGEEVAKTSDKRTRRKNKGAKRTKLPNVILVRKVFERKKRRGWKLRRLAKEKMAIEVDKTDENSDKKHKRQKIKSEYDEQKDEERFLQELEENEDMRRNVQIWENLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMI0</accession>
    <name>A0ABV2AMI0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DOCKER domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002473</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DOCK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000906">
        <property type="protein sequence ID" value="MES1920847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.740">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026791">
        <property type="entry name" value="DOCK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043161">
        <property type="entry name" value="DOCK_C_lobe_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043162">
        <property type="entry name" value="DOCK_C_lobe_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027357">
        <property type="entry name" value="DOCKER_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046770">
        <property type="entry name" value="DOCKER_Lobe_B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45653">
        <property type="entry name" value="DEDICATOR OF CYTOKINESIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45653:SF10">
        <property type="entry name" value="MYOBLAST CITY, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20422">
        <property type="entry name" value="DHR-2_Lobe_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51651">
        <property type="entry name" value="DOCKER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DOCKER" evidence="2">
        <location>
            <begin position="170"/>
            <end position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="544" mass="64557" checksum="02C9B6BDFE93C352" modified="2025-10-08" version="1">MYIQNSVRKYLELYTLLVSDQIFEESESKTKMEYIQNNVDMDKTKFVESIFLVFELLDDKILDFMEFFLSKILSTQFEDSFTEKFGSKLYYKIMKSEYNLYGKMTKIENETFNCLQIQTNYNDYDVIGRIIEIVQEKLRNEDDGEFKLAAKNLIKRTKLIKRYVNKLKNTENINNEGNEYSQIETFLNLLKILEDKKDLDKKVYFTYYSNFISLHLKYNNWSEAGIAQLNYIKMIDDQMSIKNDLNKKKTKLYKKCIQYFTNAKDWERCVYVCSQLEKLYLNEAHNFEKVAKILNIKAGFYVNMSNSETRFYPYYYRVVFTGNFDDELKLNEWVYRSRHLEQLNSFINRLLGHYTGSIFGTIKDGENPEKKYINITTLTLPEKKSNLDLTNNKKEYEQNNNIDIFYYTVPCQKGEKKSLKTLWTKKIYLQSNHKCPCVHRKSKIIKKWTEMVSPISAAIEAINSKTKKIKNIMFKVIKSSDIKSDLKILVLNLQGIIDAAVSGGTKLYIDEFFVKKPIYLDLYPEEVNNTQMFIQCIYDQQVLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN21</accession>
    <name>A0ABV2AN21_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Tubulin alpha chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_002665</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>GTP + H2O = GDP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="7">
            <dbReference type="Rhea" id="RHEA:19670"/>
        </physiologicalReaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the tubulin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001063">
        <property type="protein sequence ID" value="MES1921071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1440">
        <property type="entry name" value="Tubulin/FtsZ, GTPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002452">
        <property type="entry name" value="Alpha_tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013838">
        <property type="entry name" value="Beta-tubulin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000217">
        <property type="entry name" value="Tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036525">
        <property type="entry name" value="Tubulin/FtsZ_GTPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017975">
        <property type="entry name" value="Tubulin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003008">
        <property type="entry name" value="Tubulin_FtsZ_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11588">
        <property type="entry name" value="TUBULIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00091">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01162">
        <property type="entry name" value="ALPHATUBULIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01161">
        <property type="entry name" value="TUBULIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00864">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52490">
        <property type="entry name" value="Tubulin nucleotide-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00227">
        <property type="entry name" value="TUBULIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00228">
        <property type="entry name" value="TUBULIN_B_AUTOREG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 8" id="KW-0493">Microtubule</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tubulin/FtsZ GTPase" evidence="9">
        <location>
            <begin position="46"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00049117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="198" mass="21966" checksum="B9DEDAE512053357" modified="2025-10-08" version="1">MREIISIHVGQAGVQVGNSCWELFCREHNIDENGKLKSDVVDDKTFTTFFSETEGEKYVPRSVHFDLEPSVIDEVRNGPYKNLFHPEQLISGKEDAANNYARGHYTVGKDYVDSCLNQIRKVADNCSSLQGFLIFSSVGGGTGSGFGSLLLERLSVDYNKKSKLAFTIYPSPQTSTSVVEPYNSVLSTHSLLEHSGFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN67</accession>
    <name>A0ABV2AN67_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002551</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000974">
        <property type="protein sequence ID" value="MES1920949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003689">
        <property type="entry name" value="ZIP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16950">
        <property type="entry name" value="ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16950:SF16">
        <property type="entry name" value="ZINC TRANSPORTER ZIP13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02535">
        <property type="entry name" value="Zip"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="58"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="232"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="289"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="314" mass="34292" checksum="E4F889287A0686E6" modified="2025-10-08" version="1">MVSLVGSVIPKCFVRKHNRKLIAFCIGSLTCTLFYELLPHSLDLAFDFIEKGHAQDDSIHMFSWLIFSGILLAFFLETLVHFTSGGHSHGHRGCGDDCEETPGGSTEASRILKSRISAKRENEKVKKRTKFAYFMRNIPAIVAIDVCAKLLHHLVDGIIIGSLFSISLTSGVGGAISVAAHEISANLGAYSIYVASGMNKRGSILACVVGATTIVPGGILFVFLGTKFSDSVAIPAIIFIANGLFIYLLLADLLPLLIHAEHGTHGKEMQVTKNNVVEKTLWQKFIEGSVLFFCFAVGFIIIFLILHFMGHDHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN83</accession>
    <name>A0ABV2AN83_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002712</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001101">
        <property type="protein sequence ID" value="MES1921130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15035" checksum="21C99DCAF9998580" modified="2025-10-08" version="1">MVTVVLAGDQNRKKGKRFLSKNNTKQFFTKNGLRNKPIKKINQSKKFSFTTISSQTHKKIGTSKNFKYGNGKKNVRTNKTFKKTTKIPFLKNKNFDKNISSNDKVTLLLKGLPYNIRTSEIITVIFAILTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN95</accession>
    <name>A0ABV2AN95_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Nucleoside diphosphate kinase</fullName>
            <ecNumber evidence="9">2.7.4.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">NDPK1</name>
        <name evidence="11" type="ORF">MHBO_002432</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:44640"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 7 8">Belongs to the NDK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.6" evidence="9"/>
    <dbReference type="EMBL" id="JBDODL010000869">
        <property type="protein sequence ID" value="MES1920797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004550">
        <property type="term" value="F:nucleoside diphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04413">
        <property type="entry name" value="NDPk_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.141">
        <property type="entry name" value="Nucleoside diphosphate kinase-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034907">
        <property type="entry name" value="NDK-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036850">
        <property type="entry name" value="NDK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001564">
        <property type="entry name" value="Nucleoside_diP_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023005">
        <property type="entry name" value="Nucleoside_diP_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11349">
        <property type="entry name" value="NUCLEOSIDE DIPHOSPHATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00334">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01243">
        <property type="entry name" value="NUCDPKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00562">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54919">
        <property type="entry name" value="Nucleoside diphosphate kinase, NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00469">
        <property type="entry name" value="NDPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51374">
        <property type="entry name" value="NDPK_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 9 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Nucleoside diphosphate kinase-like" evidence="10">
        <location>
            <begin position="9"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1920797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="15302" checksum="59E5CDAB1F1FCB8B" modified="2025-10-08" version="1">MGRAENNSLEQTFILIKPDGVQKRLSGLIISIFERKEFNLKKLKMTRVDREFAKRHYAEHKGKKYFEDIIKHISSGDVVAMVLEGRNSIGKVRKLIDEIRLDFGTNSIKNVIHGSDSIKSARREIDLWFVDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANS7</accession>
    <name>A0ABV2ANS7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002857</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001236">
        <property type="protein sequence ID" value="MES1921315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="128" mass="15350" checksum="3AB3A02E2CB137D5" modified="2025-10-08" version="1">MEQMAKSVFDVDKYSSTTFGQFSKQLVFLSSNVLVFLKIALIFWKKSLKKENLEKAKKVVEVVKRFCEKIDKIIENGQIFVFEKNFDGIDEEFEEFVVLMEKERKKHFIEFKKRYFSVQNLEIDRNNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ6</accession>
    <name>A0ABV2ANZ6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002792</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001174">
        <property type="protein sequence ID" value="MES1921234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="58" mass="7173" checksum="6B6314F6B1A45F9B" modified="2025-10-08" version="1" fragment="single">MRNRLSREELIKEGKIPKEHFTFEHDAKKRELEMQMKNQNLRKQLQRRPTIEQVRELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF9</accession>
    <name>A0ABV2APF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001477">
        <property type="protein sequence ID" value="MES1921556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="178" mass="20933" checksum="118ABA422C67E9B7" modified="2025-10-08" version="1">MQLDEAKESNSDLQKYMWYLKESLDDLEQCARRNNLRFHNKNMRLDTYTIMINLCKSELNIDLPDIFRSHPNQTTMGTIISYTTSKILNLNNKVYSEKRKLNHTSLFVTGDLTRYQQSIMQESKKAVRVRAGRIFEKFYGIGPNKLVLLLNGMELLHNDRRTILNQYHCMCTSGFSPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ8</accession>
    <name>A0ABV2APZ8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002942</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001327">
        <property type="protein sequence ID" value="MES1921412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="95" mass="10866" checksum="633E7D5CC8493490" modified="2025-10-08" version="1" fragment="single">MKICGHISCEDCIQHVVPCPVQGCRCYMDRASSEYLLKYLKKEKVSIVVKLTNTPVLLPVQVESNFSHANLAHYGKEILRLKEESKHYPKWCATS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ29</accession>
    <name>A0ABV2AQ29_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003314</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001758">
        <property type="protein sequence ID" value="MES1921786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="83"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="106" mass="12695" checksum="A0CD9CD8A366A235" modified="2025-10-08" version="1" fragment="single">MSSTSETRHVLKELGIERSVRDKIRKKGLTMDKLSKMSRNDFRSLVPSRKDRKRLDEWIDDYYKSSKREKTKKSKKTRHDKSSKKDKNSRHDKSSKKDKNSRHDKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ30</accession>
    <name>A0ABV2AQ30_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003306</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001750">
        <property type="protein sequence ID" value="MES1921775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="195" mass="22558" checksum="64F13C27AC77BD1F" modified="2025-10-08" version="1" fragment="single">QNRYLHQVNGNVSSFKLSVPSDRMIPFQFRVESGIRDIESCYLMKADGTQFKELISESNLKIKITSFNGFDVISCDGKSAFSDDLPYGGPYYLKRSNGYNVWYSELFYVDAYQDLSKMLKIETNCDNDLGDAIFQDGFSFWCYFKTDLGTPSYEYIEDGIKKDGIFLPVKQLVRKEYKFTTYVPEFLCDALNAMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ84</accession>
    <name>A0ABV2AQ84_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Coatomer subunit zeta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">MHBO_003030</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 12">Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 12">Golgi apparatus membrane</location>
            <topology evidence="1 12">Peripheral membrane protein</topology>
            <orientation evidence="1 12">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Cytoplasmic vesicle</location>
            <location evidence="12">COPI-coated vesicle membrane</location>
            <topology evidence="12">Peripheral membrane protein</topology>
            <orientation evidence="12">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the adaptor complexes small subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001423">
        <property type="protein sequence ID" value="MES1921502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022775">
        <property type="entry name" value="AP_mu_sigma_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039652">
        <property type="entry name" value="Coatomer_zeta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11043:SF0">
        <property type="entry name" value="COATOMER SUBUNIT ZETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11043">
        <property type="entry name" value="ZETA-COAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01217">
        <property type="entry name" value="Clat_adaptor_s"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10 12" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="6 12" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8 12" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AP complex mu/sigma subunit" evidence="13">
        <location>
            <begin position="6"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00045555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU366053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1921502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="19844" checksum="E270FFB31276AA9B" modified="2025-10-08" version="1">MDKLEIKSIIVLSDKGARIYSKHSPKTKTKITNKSQFEDQIYQKAFKNASLSEVEPFILNSEELLLHKRYDGLYICMLCDIDANEILMASIFAVLEKSLEALYKKPISLDSVLENLSILFLAINEIVFDGIISETEADLVVERVRMDASFQDNVFIEQTIGQAISNLKEQIFKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQA1</accession>
    <name>A0ABV2AQA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003388</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001858">
        <property type="protein sequence ID" value="MES1921853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054052">
        <property type="entry name" value="Y16Q-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21825">
        <property type="entry name" value="crAss001_48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="124" mass="14456" checksum="ECB6B327BBC3E7EE" modified="2025-10-08" version="1">MPARKVINGAVQENVIQAKGQEVKQAGKVERLKLKKKIGGFNMKLNETTKMMESEDFKERFKAEYYQLKIRIQGLNETLKKYKEGTLTFKPKCSYDILNGQLKIMNMYASYLEERAKIENIELN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQF0</accession>
    <name>A0ABV2AQF0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003433</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001916">
        <property type="protein sequence ID" value="MES1921902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="80"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="280" mass="31993" checksum="B2AB2092D207CB78" modified="2025-10-08" version="1">MASQKVFMCLLEDKVNDFMQELDSNVTSFTQYKSKSFLVKPTKDNSKSFVVKPEPQNSKDFSKVDFRENKSSRSKKSSHQSHASSHHPSLAQQRLEAEEAKAKLEDAQKEAKLKKEQASIQVDFEVQRDAAVAESKLRALESMQDCISVSSQSIVEPVVDIEDPMERTRKFSEEINQQQTECITRKPLMESTHLQRPLTSAYDKEPTQISDQQHETTVTPNAKLYTPPRALNPLATEFEPNNNVFDITSFLLKKELIINKLVNLMTNQKVSWHGKLFSNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQG1</accession>
    <name>A0ABV2AQG1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003414</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001897">
        <property type="protein sequence ID" value="MES1921882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="124"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="190"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="80"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="241" mass="26806" checksum="68A83CD7214A3A94" modified="2025-10-08" version="1">MRGEITSPTWDVFVDLFIFKENEELEKRIEKDDLVREKRRLEQAEGEKEPEHEADKPELSSAPEQPTPDQPDIKGDFEKTSSSAQAEEKQPATSGVQEPLQHWNYPYAGMNNAMYMQMIAQQQNMAPPGGDKNAPPSSRGQQAAFPPGFHPGMAGFMPYPPAFMMRQQGSQQQRPGEGFVYPPMGYIPMPPQGGAGGQQASFAAGQVPPMGFYPNFGPQSAQGQQRHHQQPPPPEKQDQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQQ3</accession>
    <name>A0ABV2AQQ3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003518</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002044">
        <property type="protein sequence ID" value="MES1921995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11523" checksum="B30F58EA18DAEAD4" modified="2025-10-08" version="1" fragment="single">MFEQQLRESNAHGLVFLENNNALNMRLTELNDAHEQITTAYKKMQIDWADETKESQDKLNEAHRIVTELQERLGLTAQKILDAETKTDNYSQQIISTMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT1</accession>
    <name>A0ABV2AQT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Nucleoporin NSP1-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003541</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002099">
        <property type="protein sequence ID" value="MES1922025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007758">
        <property type="entry name" value="Nucleoporin_NSP1_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05064">
        <property type="entry name" value="Nsp1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleoporin NSP1-like C-terminal" evidence="2">
        <location>
            <begin position="19"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="180" mass="20725" checksum="CC41EE128672520B" modified="2025-10-08" version="1">MASLFQNDSNAVEVSSSANPANPQSTTQFGRLNSLRVEDIFELWKNEIDQNEKCFKRQIASAKKTDLSLIRDSNQIKQLGKEINAAKNSWSQNGKFTDSIQKNKQHLSKSLADIEKTILQQTRFAEPDEKSGFKEEIFEGVERLEKELIEFSLKIKEYLDKSDDFKIERRLTSQTVFSKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQZ2</accession>
    <name>A0ABV2AQZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001831">
        <property type="protein sequence ID" value="MES1921833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="271" mass="30934" checksum="25B7B83A5D33DDD2" modified="2025-10-08" version="1" fragment="single">MVMWHGNGLHDMIAFLAGSALETNQMALALTISTKGTPFVDGIPSLKEHTSDYKTLCEEVEDKRRVSDSKDDRKESESDGKGPNKKEMKMSEMVKNLDPGLYERFIGKKEAKKYKTPESLQNPDDMNFFSYLLTNYNKEDEEQEIKPFKITTKAGSLRCTHRLELNVEEKLAVIYEKNGVKEREIKIADYKTIKIVKPKYKKNIHSIQMRNQLGDSVVFSIFGGNEETNRFKESLLRMLKNKISAVNSNSACVSYSVRSSAQSKKLDNLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR26</accession>
    <name>A0ABV2AR26_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003641</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002255">
        <property type="protein sequence ID" value="MES1922126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17620" checksum="C47C34BA044893C2" modified="2025-10-08" version="1">MRSLWVSCSDDGVPSVTTIMTYKITQACLYESIDHGKILSGCKMNGPCVFYCDMFYQSRLGTRYGEEDCIFRGFVHQPCCQPAPTLYVVIIVPIVVVLLVFFLTISFFRRILCFRSPKNRNKSSGISTQTVVLTDSKNKTSANTNSNEEEVFEIIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR41</accession>
    <name>A0ABV2AR41_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type 2A phosphatase-associated protein 42</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">TAP42</name>
        <name evidence="2" type="ORF">MHBO_003656</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002271">
        <property type="protein sequence ID" value="MES1922141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.540">
        <property type="entry name" value="TAP42-like family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038511">
        <property type="entry name" value="TAP42/TAP46-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007304">
        <property type="entry name" value="TAP46-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10933">
        <property type="entry name" value="IMMUNOGLOBULIN-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10933:SF9">
        <property type="entry name" value="IMMUNOGLOBULIN-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04177">
        <property type="entry name" value="TAP42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="267"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="294"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="321" mass="38337" checksum="634ABBBB1BBEA477" modified="2025-10-08" version="1">MENLEKYTKITEKIDKNESNPENVKEMIFDLKNCHNKFEKLFLFSKNEEIDDISTNHLPIILCKYYLALLYSKITVTNERSAHIQIALEYLFDFLHFCEEFNLISEKIVNEFEEKSEINISREKLIAQTKKLRILRDYLTENKNSQFSQNEETKRDFYLKKIEYSIENSFCQIKRLKKEQPFALKFSQNNLGQTNFKNNFDRKNFAKNGKIFHIQNDLSEPIEYKNLKEYRQKLEKSTNIEKKILKMTDKTHIFRSFNPPTKLRTDFDHSCHDMNPVANNKNSDMTESDMSSSEEEKDRKKKIEWDTFCDENEKGIGNSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARN4</accession>
    <name>A0ABV2ARN4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003832</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002588">
        <property type="protein sequence ID" value="MES1922324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="260" mass="31122" checksum="FEC8B5F059C6CF89" modified="2025-10-08" version="1">MPSGKKCFDDEKLENNPEEKAKFEKRCEKFQLKREHTKFKDILSKATLKDLFRQLPSSLKRGSSDLENIVADLSHEEITASNKSYVIQDFRDNSISIDRARHAIDVAEHEEEDRVFRLVHDKINDRQSYKKIKDFKKRLELDESDRYYDNTPFCRTREDVRTENQRIHDEVESLKDEFSRPKMVTRSEKLKNEFFKDNYLCEPKKSVYLDAAGLSFLYWFCANCKVHFQKEKLSCPICRVFLFLLFRKILFFAKLQIFLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS91</accession>
    <name>A0ABV2AS91_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003857</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002633">
        <property type="protein sequence ID" value="MES1922349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="130" mass="13235" checksum="DA40A81C79E01819" modified="2025-10-08" version="1" fragment="single">DINVVEDVDDVIFEVSDDIVPVKVVRDVVAVSDEGVVITADECVDGAVLGVVVDGAVVVDGVLSDDVVSIDAVIAAEFVECGIVKAIDGVGPVAVVDRVVEDVIGADAVVVLSIIVLVLVVVDTVVVNES</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF4</accession>
    <name>A0ABV2ASF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004107</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003160">
        <property type="protein sequence ID" value="MES1922592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="6771" checksum="1A25652F8694570D" modified="2025-10-08" version="1">MMKKCKEQHKDQLWACKKQAATFSMIADIAGCNAFMDSQDDACNCVFSGKRPFRRHNDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASI6</accession>
    <name>A0ABV2ASI6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004137</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003249">
        <property type="protein sequence ID" value="MES1922620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd17917">
        <property type="entry name" value="DEXHc_RHA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002464">
        <property type="entry name" value="DNA/RNA_helicase_DEAH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF109">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX15 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00690">
        <property type="entry name" value="DEAH_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="250" mass="28210" checksum="AD06EA1C4CD2A4B3" modified="2025-10-08" version="1">MASKKSITKMASKKGSGKTTQIPQFLLEAGYAKSGRIICCTQPRRVAAMSVAKRVSSELDVKLGEQVGYTIRFDDNTGPSTKLKYLTDGMLLREAMHDPILKKYSVVIIDEAHERTVSTDVLMGMLKEVLLKRSDLKLVIMSATLDFEKFQQYFDGAPLLKVPGRMHPVELFYTPNPEPDYFEAAIRTVLQIHICEPEGDILLFLTGEREIETACRRIIEECGRLGEDCGPVFLYFECFDLFKSIILNIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASP9</accession>
    <name>A0ABV2ASP9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Kelch repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_003984</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002889">
        <property type="protein sequence ID" value="MES1922466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.80">
        <property type="entry name" value="Kelch-type beta propeller"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015915">
        <property type="entry name" value="Kelch-typ_b-propeller"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46093">
        <property type="entry name" value="ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46093:SF18">
        <property type="entry name" value="FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24681">
        <property type="entry name" value="Kelch_KLHDC2_KLHL20_DRC7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117281">
        <property type="entry name" value="Kelch motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0880">Kelch repeat</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="270"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1922466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="326" mass="36255" checksum="CB8DDBF7F3E1EAF6" modified="2025-10-08" version="1" fragment="single">GGSWLDDLHMIDVADSKKPCDRAKPLVWQRPEAKGTAPCARAAATAVSMDNMIFYFGGNNGVKFFNDVHVLDVEKMEWRCVRTKGTAPSPRAGHTATLMQNDRMVVFGGGVADGYSNDIFVLNLETATWTKPKIIGTAPCPRAGHTAMPILNRTAMLVFGGGFSQKVYGDLHLFDIEMGKWTRPSDAGYLPQARAGHSCVTMSNIAYFFGGADGDSHVFNDVYSLDTAFLLLKNLAPSSVGFELYENKFVDLNLVEKLESKISSLALKTRKSHNNAIQNLKELLRIEENSRKKNEKKFRELKADLAVLRKNFLESEKPAKDRRNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR0</accession>
    <name>A0ABV2ASR0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">glycine--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Diadenosine tetraphosphate synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004233</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003486">
        <property type="protein sequence ID" value="MES1922708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027031">
        <property type="entry name" value="Gly-tRNA_synthase/POLG2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002315">
        <property type="entry name" value="tRNA-synt_gly"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00389">
        <property type="entry name" value="glyS_dimeric"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10745:SF0">
        <property type="entry name" value="GLYCINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10745">
        <property type="entry name" value="GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01043">
        <property type="entry name" value="TRNASYNTHGLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="7">
        <location>
            <begin position="47"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="206" mass="23820" checksum="46731919D6F492D7" modified="2025-10-08" version="1" fragment="single">MDKNEITKILKDLKIVSPTTGNNLSEPYEFNLMFGTQIGPTGKLKGYLRPETAQGIFVNFKKLLEENGGKVPFAAAQIGNSYRNEISPKSGLLRVREFAQAEIEHFCDKNKGVIYPKYENITDEKVAFWKREDQENNVEPQFLSVKNAFEKKMITNQTLAFYIYKTLKFLLNIGINGKFLRFRQHLKNEMAHYASDCWDAEIRTSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATB7</accession>
    <name>A0ABV2ATB7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_004437</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the recoverin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004003">
        <property type="protein sequence ID" value="MES1922908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028846">
        <property type="entry name" value="Recoverin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23055">
        <property type="entry name" value="CALCIUM BINDING PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23055:SF178">
        <property type="entry name" value="NEUROCALCIN HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00450">
        <property type="entry name" value="RECOVERIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0519">Myristate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="7">
        <location>
            <begin position="21"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="7">
        <location>
            <begin position="51"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1922908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="145" mass="16508" checksum="F9883D380C227657" modified="2025-10-08" version="1">MDHLDKELFLRVFNLPGILGERLFSVFDVNNDQQINLEEFINGLSVIIHGSKTSKTQFLFKMYDLNQDGFVSKKDLCTMLFSIVNGGLSILYDLGQSQVDLDEGKPNLNNGTSYEIFVDRLADSAFEINVKILQFESNSQNQFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATE6</accession>
    <name>A0ABV2ATE6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004479</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004121">
        <property type="protein sequence ID" value="MES1922948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11866" checksum="DD119C64BE11ACB5" modified="2025-10-08" version="1">MFLFHVLVIKRQHMLVLFHPCPPGIQPDCLLKEGGDPRSSGPRSNILFHEISSTYICYECAVNEKARKDFRKFIKTTKKPTKRKEDSVTYSLLRKQGSSAKQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATP2</accession>
    <name>A0ABV2ATP2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aminopeptidase 2 mitochondrial</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">APE2_3</name>
        <name evidence="3" type="ORF">MHBO_004546</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004366">
        <property type="protein sequence ID" value="MES1923012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.50.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024571">
        <property type="entry name" value="ERAP1-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050344">
        <property type="entry name" value="Peptidase_M1_aminopeptidases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533:SF299">
        <property type="entry name" value="AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11533">
        <property type="entry name" value="PROTEASE M1 ZINC METALLOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11838">
        <property type="entry name" value="ERAP1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ERAP1-like C-terminal" evidence="2">
        <location>
            <begin position="2"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="229" mass="26443" checksum="5ECAD202227D6AAA" modified="2025-10-08" version="1" fragment="single">LTNKIAQKIEKDAKDEAQKINLSKLKGPILYLRAKSGFKPAIETAKQIFSEIEKNGIDSNIYGAVLKTVIKYGNDDEFEKVKRLFESETEPTKKNTSLSALGSSKDKNIIQKALKMVLSRKVRAQDRFILFLALARNPHAAKQTWQFFKKSYEVLRKEITSDTLFSHFVNVVRYLDAKEEIEDARNFFDGQNQKGYEKKLSQAFEEAELTLATRKRELPAIEKWLNEKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT4</accession>
    <name>A0ABV2ATT4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DnaJ-related protein scj1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SCJ1_1</name>
        <name evidence="3" type="ORF">MHBO_004316</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003730">
        <property type="protein sequence ID" value="MES1922792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd10747">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10719">
        <property type="entry name" value="DnaJ_zf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.230.10">
        <property type="entry name" value="Heat shock protein DnaJ, cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044713">
        <property type="entry name" value="DNJA1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001305">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43888">
        <property type="entry name" value="DNAJ-LIKE-2, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="DnaJ/Hsp40 cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51188">
        <property type="entry name" value="ZF_CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="17735" checksum="B59ADC44B68038B2" modified="2025-10-08" version="1">MGADSEDNIHKCQKCKGEGVIPMYLQYGPGFVVKSEQKCDQCDGKGTIIKKKCPICKGRKLVTNKRKISFNVEKGLNDGDTIVLENEADESIAHKSGHLILTVKTIPHKRFVRKGNDLHFDHTVRLSQALLGFDIEIEGLAGEKIRLKREFITRPGFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATT8</accession>
    <name>A0ABV2ATT8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Canalicular multispecific organic anion transporter 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ABCC2_1</name>
        <name evidence="9" type="ORF">MHBO_004568</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004423">
        <property type="protein sequence ID" value="MES1923034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050173">
        <property type="entry name" value="ABC_transporter_C-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24223">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="41"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="8">
        <location>
            <begin position="1"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="201" mass="23194" checksum="F89478C69CF7A0A8" modified="2025-10-08" version="1" fragment="single">MTFFDTTPRGRMLNRFSSDTSTLDRSIPRSSFSFLTCFAEVVAILIIISVITPFFIVGLIPLCVMYYFIQTFFIRPTRDIKRIGSTLLSPVYSGFQETLDGTTTIRAFKEEKRFERENNEKLDRFTRVFFSNFIANRWLQVRLELLGSFVVALSSILIVVSRNKLSGGLAGLTLTYALRFVATLNWMFSFKTRKNVQNLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU1</accession>
    <name>A0ABV2ATU1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004627</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004599">
        <property type="protein sequence ID" value="MES1923088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="236" mass="27152" checksum="F9887041B6A36578" modified="2025-10-08" version="1" fragment="single">KKFSPKHFTHYIAPPPAPPPPFPSNQPETIKTTQIPRQNAHSTKPFQQQYVSYHNNNFNNFIIQAPNLSENQIQQLRNLSSQLQSAPPPQNQRQQYVNPFLSASAFHQQKFDSGSYDVGDGNNENKSFYSGNDFGNVKENLQFVKSDEKVRFERSFKNAKKPIFIGKQKNYYRWGVPHPPPIAEMPYFGRSSAIKRSGFEESPREIRPGKRRPRKMFTDEEVNNLIQGVTQVSLLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATV2</accession>
    <name>A0ABV2ATV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methionine aminopeptidase 2</fullName>
            <ecNumber evidence="4">3.4.11.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">METAP2</name>
        <name evidence="4" type="ORF">MHBO_004624</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010004596">
        <property type="protein sequence ID" value="MES1923085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004239">
        <property type="term" value="F:initiator methionyl aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="entry name" value="Creatinase/methionine aminopeptidase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050247">
        <property type="entry name" value="Met_Aminopeptidase_Type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45777">
        <property type="entry name" value="METHIONINE AMINOPEPTIDASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45777:SF2">
        <property type="entry name" value="METHIONINE AMINOPEPTIDASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="Creatinase/aminopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="3 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="135" mass="15283" checksum="80F1DBBFF5B204C9" modified="2025-10-08" version="1">MGIDVRLCDIGRAVSEVMISEVEIGDDLVAMKPIKNLNGHSIGEYTIHAGKTVPLYDNHDETKMEEGEMYAIETFGTTGSGLIKDSSKLEVSHYMKNQSAKFVSIDSKNVRELLNFVNRNFGNLAFCRRWLDRFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ0</accession>
    <name>A0ABV2ATZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Coagulation</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MMRN1</name>
        <name evidence="4" type="ORF">MHBO_004678</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004861">
        <property type="protein sequence ID" value="MES1923135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001073">
        <property type="entry name" value="C1q_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050392">
        <property type="entry name" value="Collagen/C1q_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15427:SF50">
        <property type="entry name" value="COMPLEMENT C1Q TUMOR NECROSIS FACTOR-RELATED PROTEIN 2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15427">
        <property type="entry name" value="EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00386">
        <property type="entry name" value="C1q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00110">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="TNF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50871">
        <property type="entry name" value="C1Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="C1q" evidence="3">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="99" mass="11088" checksum="35D0306ACD3FDBCE" modified="2025-10-08" version="1">MYPRNGYSTSTGIFRCTKHGLYIFLVNVESNTQLLTAYIQVNYSRKTEIRSDGRRGGYDCTSAVAVLELNYGDEVSVYLTTGTADEGQTMFNGYLLHPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU07</accession>
    <name>A0ABV2AU07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Heat shock 105kDa 110kDa protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">HSPH1</name>
        <name evidence="3" type="ORF">MHBO_004694</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004899">
        <property type="protein sequence ID" value="MES1923151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45639">
        <property type="entry name" value="HSC70CB, ISOFORM G-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0346">Stress response</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="215" mass="23561" checksum="AD20CAA1F10398A8" modified="2025-10-08" version="1" fragment="single">LKDLLGQNLSHSNSQTDIQNLFLKYNLIVLQDGSIRASISYRGENLLIPIEAATAMLLKNLRKSAQSYSESAIHDCVIAVPAFFTIQQRESLIAAAKISGLEVSGLISEQAAVGLAYAMSKSFDSEEKFVLFADFGYSALKLGLISFRDKQLSVLKTLETKSVCGRILESELLKIVLGKAKEKHGADFGNLLETNKKALIRLEKAVEKAKRVLSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU31</accession>
    <name>A0ABV2AU31_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004707</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004942">
        <property type="protein sequence ID" value="MES1923162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="77" mass="8753" checksum="951D6F5CE0651862" modified="2025-10-08" version="1">MNLRDLLKMVSKRNQTHSKENEKEGVKLEVLEGSDAIELTRKESIKEAEFEFGVDNIVTCEVPEAASIEIDTEFQVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU33</accession>
    <name>A0ABV2AU33_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Vps72/YL1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004717</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004986">
        <property type="protein sequence ID" value="MES1923173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013272">
        <property type="entry name" value="Vps72/YL1_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08265">
        <property type="entry name" value="YL1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00993">
        <property type="entry name" value="YL1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="Vps72/YL1 C-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="24077" checksum="20837B3556F136DF" modified="2025-10-08" version="1" fragment="single">QSCAITNQPALYRDSVTLLPFSDKNAFSKIRRALKDKKIVPFRRSKLFRSYTIRVKKPKGWERKKIFSRKFVSYKNICFRLNKNDNEKNVKINLGKLRKLVSTQTFNTKIKTIKTDSHLKLKDSIFKDRIKNETESDYLKNQILLSETRMNNFLAQTRRFLETQKNFTAAHEEFSRSISNFITSGFLEAFACYIMPILLYYRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ9</accession>
    <name>A0ABV2AUQ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004961</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005972">
        <property type="protein sequence ID" value="MES1923395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="76" mass="8911" checksum="759E6A2407F5F496" modified="2025-10-08" version="1">MSTVTKNKLSADRKNNKRNLSQTSKDEIFEDEVFIKKRKLSKLVPLEFSYIPDPSLYEGGTWREEGHHFYSQNSIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUV5</accession>
    <name>A0ABV2AUV5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Minichromosome maintenance protein 5</fullName>
            <ecNumber evidence="4">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">MCM5_4</name>
        <name evidence="4" type="ORF">MHBO_004998</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="4"/>
    <dbReference type="EMBL" id="JBDODL010006158">
        <property type="protein sequence ID" value="MES1923427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF42">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00350">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM C-terminal AAA(+) ATPase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="132" mass="14976" checksum="C187499E6E0069EE" modified="2025-10-08" version="1">MVLADGGVVCVDEIYKIIEDDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPTFGRYDDLKKAAENIDFETTILSRFDLIFVIRDRKDPERDDQISKHVLNIHMQKDVDSNPPEIDPLLFTKFLFLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV13</accession>
    <name>A0ABV2AV13_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005092</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006574">
        <property type="protein sequence ID" value="MES1923510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044801">
        <property type="entry name" value="Filamin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017868">
        <property type="entry name" value="Filamin/ABP280_repeat-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001298">
        <property type="entry name" value="Filamin/ABP280_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38537:SF8">
        <property type="entry name" value="FILAMIN-A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38537">
        <property type="entry name" value="JITTERBUG, ISOFORM N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00630">
        <property type="entry name" value="Filamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00557">
        <property type="entry name" value="IG_FLMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50194">
        <property type="entry name" value="FILAMIN_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="Filamin" evidence="2">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="repeat" description="Filamin" evidence="2">
        <location>
            <begin position="36"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="192" mass="20741" checksum="CBE40001A299985F" modified="2025-10-08" version="1" fragment="single">KAGYVQVEYEALTPGQYSIDVKIGANGDSIKDSPFTVNIYAGEVVVTGKGATDNEFVKGEKLPIQIDSGTKSGGLIETKKIAVSVKSPSGNSLHLDYVDHENGKYDVSYAPLENGKYEVSVNAFGKEVFSKKIMLLDSIVKQSKVILADELYDNKIIPNNRASGFSAQVVSQDGKIITDVELTVDVLNSDKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV76</accession>
    <name>A0ABV2AV76_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Histone-lysine N-methyltransferase NSD3</fullName>
            <ecNumber evidence="7">2.1.1.354</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">WHSC1L1</name>
        <name evidence="7" type="ORF">MHBO_004837</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.354" evidence="7"/>
    <dbReference type="EMBL" id="JBDODL010005454">
        <property type="protein sequence ID" value="MES1923288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140999">
        <property type="term" value="F:histone H3K4 trimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16100">
        <property type="entry name" value="ARID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15568">
        <property type="entry name" value="PHD5_NSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.60">
        <property type="entry name" value="ARID DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001606">
        <property type="entry name" value="ARID_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036431">
        <property type="entry name" value="ARID_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042163">
        <property type="entry name" value="PHF12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46309">
        <property type="entry name" value="PHD FINGER PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46309:SF1">
        <property type="entry name" value="PHD FINGER PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46774">
        <property type="entry name" value="ARID-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51011">
        <property type="entry name" value="ARID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="5">
        <location>
            <begin position="27"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="ARID" evidence="6">
        <location>
            <begin position="120"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="169" mass="19618" checksum="1B9DDB4138C4F685" modified="2025-10-08" version="1" fragment="single">MTEFIPKEEMSDFDPYSDDREESFEEEDVCFICGDGGNLLLCDFEDCKKVLHPKCANIEEIPDGEWHCPSHFCCKCNSDSVKNLSCSYCSKAYCEKDLPKKLKNLKQVEFQCEECLSKNLDPKQRFVNRLVESMRRRHEMQRNYRVGGVDIDFYDLYSAVVAHGGAKRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV95</accession>
    <name>A0ABV2AV95_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Eukaryotic translation initiation factor 1b</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">EIF1B</name>
        <name evidence="4" type="ORF">MHBO_005165</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SUI1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006934">
        <property type="protein sequence ID" value="MES1923571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11566">
        <property type="entry name" value="eIF1_SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.780.10">
        <property type="entry name" value="SUI1-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001950">
        <property type="entry name" value="SUI1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036877">
        <property type="entry name" value="SUI1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005874">
        <property type="entry name" value="SUI1_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10388">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01253">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004499">
        <property type="entry name" value="SUI1_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55159">
        <property type="entry name" value="eIF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50296">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SUI1" evidence="3">
        <location>
            <begin position="12"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1923571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10755" checksum="E609465602FF94F3" modified="2025-10-08" version="1" fragment="single">EADEINSIANYIHIRLQRRNGRKSLTTVQGLAEDLDVNKILKYLRKTYSTNGTVVNDKEFGSIIQLQGDQRKNVANFFIRYSICKANEIKVHGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA4</accession>
    <name>A0ABV2AVA4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005197</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007084">
        <property type="protein sequence ID" value="MES1923596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="147" mass="17608" checksum="568DE377E262CFAE" modified="2025-10-08" version="1">MCSRIARLPLYFITNKDDQLESVLWCQDHIANKTRRGLRRKRKHKEWRPSALNTRQSQNSDWHFTETLSVYPKNKVYLSREKHCLFDQTPENEGDLNKWTIVSTTDMRSKEAFEAHRLIAEQWEETIVGGLEPVIERFFCFKNCELF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVB7</accession>
    <name>A0ABV2AVB7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007189">
        <property type="protein sequence ID" value="MES1923611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.380">
        <property type="entry name" value="Zn-finger domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036443">
        <property type="entry name" value="Znf_RanBP2_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90209">
        <property type="entry name" value="Ran binding protein zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16697" checksum="67F0813C865016FA" modified="2025-10-08" version="1" fragment="single">LIDVNVISDILRDKRDRKCNKIKLNKLIKEDVQQSQNMEDNENWSCPTCTFLNPLSKNSFEICFATKPTGGARKKPVPTNKESGDENADAVFLKMSCLYALARYFKEKVGFMDNKPVFDLVKERILKEVNDDSVLNRLLVLSNLPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVE7</accession>
    <name>A0ABV2AVE7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA polymerase delta catalytic subunit</fullName>
            <ecNumber evidence="3">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">POLD1_3</name>
        <name evidence="3" type="ORF">MHBO_005000</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010006163">
        <property type="protein sequence ID" value="MES1923429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025687">
        <property type="entry name" value="Znf-C4pol"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14260">
        <property type="entry name" value="zf-C4pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="C4-type zinc-finger of DNA polymerase delta" evidence="2">
        <location>
            <begin position="35"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00049244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12807" checksum="75259FEEF7F9276A" modified="2025-10-08" version="1" fragment="single">GNVNQLLFGEHTRNIKISNSSNSSLMKFFSKSKKCRGCRNVLAKDEKAICRYCQPNIDKILLKETKNLRSRERRFSELWVQCQRCQDTVAQEILCSNRDCPIFYRRTKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVM7</accession>
    <name>A0ABV2AVM7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007499">
        <property type="protein sequence ID" value="MES1923657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="63" mass="7145" checksum="F043CABC009EE247" modified="2025-10-08" version="1" fragment="single">AKSAVAYTIKRLEEQVDFPILDSNNYRTKLTLQGEALIEKAQNLLLESDKLKKEIRNIANGVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVM8</accession>
    <name>A0ABV2AVM8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005009</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006197">
        <property type="protein sequence ID" value="MES1923437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7819" checksum="BC93C733E05F1E6F" modified="2025-10-08" version="1">MPNYYEDGEYEAFLGSLRGITKQLGIPSSGVELLNNLKEVKTRERVIRHYRRQREDELTYTKHYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVP7</accession>
    <name>A0ABV2AVP7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005103</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006612">
        <property type="protein sequence ID" value="MES1923519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="19196" checksum="B84CC35E3DCC76F9" modified="2025-10-08" version="1">MFVKSYFCIRPVLLRRQYDIDAASLFGQILHKSNYNLNITRCLIRLSAAYPKNFFFSYLRGFCSIHRRCYGNAVNFFMKNHTVNDVPTDLCLYVGSCYLMQSKKRTCPNKEKIKLIGNTFIRKYRRRKHKNAMSTLNLAETLLFQGRKAEAFCMFEKVLRSKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVT6</accession>
    <name>A0ABV2AVT6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005026</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006262">
        <property type="protein sequence ID" value="MES1923453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="131" mass="15331" checksum="E48D4263252A452A" modified="2025-10-08" version="1">MEDSGKTQNRHFESKPVTNISVPYVFQPFLVIQPARDHRHSFNLVRLRLRTVLLQRRLGRGKQRVQRSKSDRRHFSVAGDPDFPNGAIHSTASDRLELGVRRRGHLPRFYAFPQLSHRRRRPQVFSPDVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVY5</accession>
    <name>A0ABV2AVY5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_005117</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006670">
        <property type="protein sequence ID" value="MES1923531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002225">
        <property type="entry name" value="3Beta_OHSteriod_DH/Estase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050425">
        <property type="entry name" value="NAD(P)_dehydrat-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366">
        <property type="entry name" value="NAD DEPENDENT EPIMERASE/DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366:SF564">
        <property type="entry name" value="STEROL-4-ALPHA-CARBOXYLATE 3-DEHYDROGENASE, DECARBOXYLATING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01073">
        <property type="entry name" value="3Beta_HSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3-beta hydroxysteroid dehydrogenase/isomerase" evidence="2">
        <location>
            <begin position="22"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="109" mass="12381" checksum="00DBD4971E50CD61" modified="2025-10-08" version="1">MNICRIRKEYFDRLKIGGRTVLVTGGCGFLGKNLCSLLLQLDVIVKIIDVKIHRFVEDEKIQYIEGDITNKGDIKKAIENCEIVFHVASPSSLTKNSDILKKGFKNKRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEA2</accession>
    <name>A0ABV2AEA2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000049</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000006">
        <property type="protein sequence ID" value="MES1918017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="1">
        <location>
            <begin position="168"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="243" mass="28507" checksum="A085FC2710DC97A9" modified="2025-10-08" version="1">MAFIAVASSATAATFLVVLKKSPIEKENFSRFLEKKRLENIEESQSFWDFLVKLKDSDTFYSKIKQIWQSGRLKNKTFYKKHHLRLRSMKKIIRKRDDHLKLALFIKGMEVFKNTETVYKKDLGDVLYKSSASKDFMDSFANYFAKKKHCDLITAEEFLEFEAKEISAKSFYLKSLFDYFDVQNTGKISYTEFRAIIISVDDYVTENEMLWLFEDLDENKDGEIDCAGFHIKIQNLKSGSICK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEE3</accession>
    <name>A0ABV2AEE3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="6">rRNA-processing protein fcf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">FCF1</name>
        <name evidence="6" type="ORF">MHBO_000116</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000014">
        <property type="protein sequence ID" value="MES1918095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09864">
        <property type="entry name" value="PIN_Fcf1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1010">
        <property type="entry name" value="5'-nuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006984">
        <property type="entry name" value="Fcf1/UTP23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037503">
        <property type="entry name" value="Fcf1_PIN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12416">
        <property type="entry name" value="RRNA-PROCESSING PROTEIN UTP23 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04900">
        <property type="entry name" value="Fcf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="PIN domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="16"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="182" mass="20467" checksum="DD34F1CDB714E3CC" modified="2025-10-08" version="1">MAKTKRKFAKVKRRISPRDSRLRKEAPDKKEDQLVRRIEKQSAAMFFSYNTALGPPYRVLLDTNFINFSLKNKLDILPAMTDCLLAQCAVFVTDCVMAELEKLGPKFRMALKFFLLSRIAKDERFERLACSHSGTYADDCLVNRVSTVSDKFTFSTSATSWPLATGTSKDGSGKSPECPSCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEH9</accession>
    <name>A0ABV2AEH9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000121</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000015">
        <property type="protein sequence ID" value="MES1918100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13507" checksum="22F2F75B36D67E72" modified="2025-10-08" version="1">MFYAPNCKIKLRENYALTKKSKYVEERQLIIDHLELDDYSIVKECTIPPKFNNSDRIKITNCSLYSGKFISTCSFELKNGYEFIGKSRSKKVVVKCDDDYKKNDTKYLIHRSSIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEN7</accession>
    <name>A0ABV2AEN7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Kringle domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000181</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000023">
        <property type="protein sequence ID" value="MES1918169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.20.10">
        <property type="entry name" value="Plasminogen Kringle 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000001">
        <property type="entry name" value="Kringle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013806">
        <property type="entry name" value="Kringle-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018056">
        <property type="entry name" value="Kringle_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038178">
        <property type="entry name" value="Kringle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050759">
        <property type="entry name" value="Serine_protease_kringle"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261:SF13">
        <property type="entry name" value="PLASMINOGEN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24261">
        <property type="entry name" value="PLASMINOGEN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00051">
        <property type="entry name" value="Kringle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00130">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57440">
        <property type="entry name" value="Kringle-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00021">
        <property type="entry name" value="KRINGLE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50070">
        <property type="entry name" value="KRINGLE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0420">Kringle</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045689196" description="Kringle domain-containing protein" evidence="3">
        <location>
            <begin position="27"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Kringle" evidence="4">
        <location>
            <begin position="38"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="194" mass="22140" checksum="159A3F475B2F41FA" modified="2025-10-08" version="1">MASKCLVLFSIFSTILITLILIPSSAISSASYSEAEKENCIGNGEDYFGEIKITETGKYCKTWPRFWSTVYPLADLKNDFCRNPNKDLTGPWCFTELNEEGKEYCEINCEDGFVKIKDGTRCKDRDEVPLQTNGSVSDCQELCWKMDDCDVFEYHSDTEDCSRCLTSSDLGVFGNGWKLMKRYMKPSLYILFLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AEV3</accession>
    <name>A0ABV2AEV3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">tryptophan--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Tryptophanyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">MHBO_000193</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.2" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000025">
        <property type="protein sequence ID" value="MES1918182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.240.10">
        <property type="entry name" value="Tyrosyl-Transfer RNA Synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002306">
        <property type="entry name" value="Trp-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050203">
        <property type="entry name" value="Trp-tRNA_synthetase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43766">
        <property type="entry name" value="TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43766:SF1">
        <property type="entry name" value="TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01039">
        <property type="entry name" value="TRNASYNTHTRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="18867" checksum="4105D09FD092A4B8" modified="2025-10-08" version="1">MTQYKTQLKQEANFGLLCYPLLQAADILAYNPTHVPVGPDQKQHVELTRSIARNANSVLTNRNLKPFFNVPEAIISKVRIMSLTNGVKKMSKSDENTNSRINLDDSETDICSKIENSLNLARENNNFKQVFQNLFQIVEFFETLVFVYSAKTNLSKFCNTLNRPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF21</accession>
    <name>A0ABV2AF21_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000031">
        <property type="protein sequence ID" value="MES1918242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="101" mass="11611" checksum="EEADE5115F81EE3E" modified="2025-10-08" version="1">MSNFFYEKGDKLCEKKLKTSENILCCEIRKDISFPKKIIATGDMDGKITLWAMKINENFSEKQNFIYDLVEIVSCSLSNQNSQPVGDLLSISSEKKFFLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF86</accession>
    <name>A0ABV2AF86_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000327</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000046">
        <property type="protein sequence ID" value="MES1918348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="62" mass="7373" checksum="2641A6F9DA2884AD" modified="2025-10-08" version="1">MVNRREGENGLEWLIRRLSERGSRRGMPKQIVDKFPLFVYKNAENDDNNDGLQRFINSFCQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFC3</accession>
    <name>A0ABV2AFC3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ankyrin repeat protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000343</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000049">
        <property type="protein sequence ID" value="MES1918370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="30"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="451" mass="52199" checksum="DF504C9003397AAA" modified="2025-10-08" version="1">MSAAPNAKWLNSSEEDMEEEPDSEDRDFIAAEIENAANERSFGSQSDYDDMPTSENTISESPKNLKIDKNFYEKWSKRLYGKKMNNAVPVDKIPLTLRKANSKFGKLKIKISKIGRNRRQFEKALKKSSVRQMAHLLNNGAMEPWKLFLAGFKSWSTNKRKMDEKENAAVLWDFEHLKRLSNLSENGDKKSIKILNKIDGIYEKHFERKLFEKITSKSIANDFYKLLKGFDTKNPKSRETVLAVHLWSHQITNEWRSAITEGNCVRLFEILALGLNPKSEDYELDVQLAAENDRKNVLELLIDCGVKVDITECLAKSLFSDKTETAGFLLEKGADPDIKVESSKTYTEEKVPIVVEMLNRRQIECASLLVRKGADTNFDVLVTNAKGRKKKVGLLQYAQRFHLRKRFRKNEKMWNRLKLKRKANFEKTILTELPFKNLPEKALKRLLDYSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFD0</accession>
    <name>A0ABV2AFD0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA-directed RNA polymerase subunit</fullName>
            <ecNumber evidence="6">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">RPA1_1</name>
        <name evidence="8" type="ORF">MHBO_000365</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the RNA polymerase beta' chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="6"/>
    <dbReference type="EMBL" id="JBDODL010000055">
        <property type="protein sequence ID" value="MES1918394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.180">
        <property type="entry name" value="RNA polymerase ii"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.860.120">
        <property type="entry name" value="RNA polymerase II, clamp domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045867">
        <property type="entry name" value="DNA-dir_RpoC_beta_prime"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000722">
        <property type="entry name" value="RNA_pol_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006592">
        <property type="entry name" value="RNA_pol_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007080">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044893">
        <property type="entry name" value="RNA_pol_Rpb1_clamp_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376:SF11">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04997">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00623">
        <property type="entry name" value="RNA_pol_Rpb1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00663">
        <property type="entry name" value="RPOLA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4 6 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase N-terminal" evidence="7">
        <location>
            <begin position="285"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="606"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="606" mass="70026" checksum="8C89BBD68284C434" modified="2025-10-08" version="1" fragment="single">MDSSDLTRSAVWEKRNGCSFGVYLPEEIRDISVKEITNIRNFDKMGEQVENGLYDPSLGPLSDFALCKTCKQRINHCPGHLGHIELKFMLYNPVLFNGLIRMLKLACLYCNKWRVGNDEIKTFYNKMEMIEKGELLKAQYYKTTKSVILDEFLKEENPVLEKNSKFQNNFTNEEKAIFRKIVVKEFYKQSTNKKCKNCDCINPTFENKNSTLVFKKLKTKQYNHNEELMEGKVIPEFLAENKDKEIMAIELRPYLKKFWKRNQKILSLFCGVLTNSFSKNFKGFDTFFITTLLVSPSKYRPINIIGNETLDNEKTICLEKIMLCNQKFVKLIKNFNKNGQNFSKKRKENNVKVEINLENGVKTENLNNKKNLENDSKPNFQNLAKIEKKAKNIILEAQSLVDDLFNSKNSGKFGVKQIIEKKTGIIRGNLMGKRVNYAARSIVSPDLWIESTEIGVPENFAKKLTFPESVTEQNIAFLKRSIENGPLVHPGANFIEDQNGYLIDLEMKSKQERKIMAGALTATQSGISDKKNISSILTSKRVYRHLDEKDYVLVNRQPTLHKASMMAHKVRILTSQDQVLRLHYTNCSTYNADFDGDEINMHFPQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG5</accession>
    <name>A0ABV2AFG5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Prostaglandin E synthase 2</fullName>
            <ecNumber evidence="2">5.3.99.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PTGES2</name>
        <name evidence="2" type="ORF">MHBO_000028</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.99.3" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010000004">
        <property type="protein sequence ID" value="MES1917992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050220">
        <property type="term" value="F:prostaglandin-E synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12782">
        <property type="entry name" value="MICROSOMAL PROSTAGLANDIN E SYNTHASE-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12782:SF5">
        <property type="entry name" value="PROSTAGLANDIN E SYNTHASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="62"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1917992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="175" mass="20319" checksum="EC0CEABA396FAF00" modified="2025-10-08" version="1">MKLLTKLEKFKISLKTNAKSGAKKPLEKTFVPPTLSPDSFHRQHDISGLLLEKNCNTNNYFGALFLYQFKRCPYSGKIRALLDRLGLWYTLLEVDPRSKKMLDWSSFATVPVLRIKSDRHKIAIGESNVIIDFLLDEALNYKLINRDIYGLFFYRFKKTGLLKVSEKRKIGLTKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFG6</accession>
    <name>A0ABV2AFG6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Non-histone chromosomal protein 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">NHP6</name>
        <name evidence="3" type="ORF">MHBO_000375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000057">
        <property type="protein sequence ID" value="MES1918406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00084">
        <property type="entry name" value="HMG-box_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.10">
        <property type="entry name" value="High mobility group box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009071">
        <property type="entry name" value="HMG_box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036910">
        <property type="entry name" value="HMG_box_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00505">
        <property type="entry name" value="HMG_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47095">
        <property type="entry name" value="HMG-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50118">
        <property type="entry name" value="HMG_BOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMG box" evidence="2">
        <location>
            <begin position="40"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="HMG box" evidence="1">
        <location>
            <begin position="40"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1918406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="98" mass="11756" checksum="3C6FF53356BCD4AE" modified="2025-10-08" version="1">MQCPNCSFIMTFIQEECQENQFAAKNDFSKQTENPFKNFTEKPKSAFMIYCDQNRNLKKEHNPDLSYGEITLLLRKEWLSFTDSQRDFYFQKSKKLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFI1</accession>
    <name>A0ABV2AFI1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000421</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000064">
        <property type="protein sequence ID" value="MES1918454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="116" mass="13186" checksum="182C5B0547E59C0D" modified="2025-10-08" version="1">MPSALHQGDEPFFVRLFVFPAIDYRVVSAFSELERLLIQTSSNKFVSAYEKAERTPSPLQKEMFLRPLKESIVHSFWANIWIKQLPTAPEPPITKTSQPFLKFFSLLADSIAVSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFU0</accession>
    <name>A0ABV2AFU0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000483</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000076">
        <property type="protein sequence ID" value="MES1918520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="106"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1918520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15362" checksum="E8752C9E5D5EAA0A" modified="2025-10-08" version="1">MASQQIKLKSKLYTHLKTFQTDMNKLEVLLDNSSKDLPPLSISNFSQCCEKRKAEFKQIESELTTKFNKIEEEYFKPLLYLEKTHFTTVLKDRNALKTAKSNMQKKNPKKKKELRKNKSMRKERNLYIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV9</accession>
    <name>A0ABV2AFV9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MPN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_000256</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000034">
        <property type="protein sequence ID" value="MES1918263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08061">
        <property type="entry name" value="MPN_NPL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.10">
        <property type="entry name" value="Cytidine Deaminase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016563">
        <property type="entry name" value="Npl4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007717">
        <property type="entry name" value="NPL4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007716">
        <property type="entry name" value="NPL4_Zn-bd_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12710">
        <property type="entry name" value="NUCLEAR PROTEIN LOCALIZATION 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12710:SF0">
        <property type="entry name" value="NUCLEAR PROTEIN LOCALIZATION PROTEIN 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05021">
        <property type="entry name" value="NPL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14560">
        <property type="entry name" value="Ubiquitin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05020">
        <property type="entry name" value="zf-NPL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="3">
        <location>
            <begin position="6"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="NPL4 zinc-binding putative" evidence="1">
        <location>
            <begin position="167"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="Nuclear pore localisation protein NPL4 C-terminal" evidence="2">
        <location>
            <begin position="307"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1918263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="582" mass="66435" checksum="CBB53BA160FF09F2" modified="2025-10-08" version="1">MSLILRISHSSGMKRIDADLNDNIAIFQKKIESITGVNPQNQMLSTTSMGNPNFIDLENKSALLKDFNFKNGKILYLISDGQNISKMAKNESLFERSDKCQHDLKTRCPYCKAKKEVEIKKKCFHGDKGFCLNCSPLVNSKKKIRNKCYHKEDTFCNNCIPDRKLTKNEDRQILKEQNCFCSNSKQRCIYCSLANKKISDYADSKHISSYSKFLADKRDNCNHQKSSFDTKTKFCAMCKPEKIISYKIKQCKNHAPWPKGICSQCTPPTAVIKLQNYRHCDEVSVMDTRPLQKFISSWLNNPEIRKVCFLIGSYSKIETGDSSFLTRAEIQAIYLPPHVSSMNSVTFKKDPNFESVKKIAESAKLQIIGWAFTSIPRSDKKYGGEMFLSAAEIRQASKFQSSFCDNLDHSQFITMVISHNEEGQIEPKCYQVSDQCVALERENIIIEADDPGFMTLPTFGKDKYAPNVIYKTSQVSAGDKFLPDEFLVKLGSMQPEKPKRFFERCEFPLENVALQDIQSFVSRTIELPYHKKFSDFNAVLWIRSLIGIEATIKLMRCVAANESVTNQVGEALDTNLAKYFGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG27</accession>
    <name>A0ABV2AG27_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000556</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000094">
        <property type="protein sequence ID" value="MES1918612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="16761" checksum="2FDA5D27BDEBE3AC" modified="2025-10-08" version="1">MDSNKKENAENVFDESGDYEVFKVEDKGVGDEIEYKKIERKKELINGEMVEETLEIVRNSHGTEKNYRKKVNGTDDNTKDDKVSKIGNEVVGDEDKYKKIEIKEELINEEMAEERLEDVRNSHGTKTIINLDNFETQQFLYQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG44</accession>
    <name>A0ABV2AG44_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">MHBO_000594</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000102">
        <property type="protein sequence ID" value="MES1918660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051334">
        <property type="entry name" value="SRPK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634:SF9">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045768373" description="non-specific serine/threonine protein kinase" evidence="9">
        <location>
            <begin position="20"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="1"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1918660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="328" mass="38194" checksum="07A2D18562E7916D" modified="2025-10-08" version="1">MEHVILMILDVCIVFEVLGDNLLTQIMKNDQEFTKLNKNIKFDHENCYLTKRNQIKKCAKDILEALKFLHEKCELIHTDIKPENIAFCLSSSEKRLLIENCQNNKNGHNLAKNKSVKKPLKSKYKLPSKTVEEEIKEMTDDLQKKFKILNKSNFGKIDKLAESESNKKNWKLVDFGTALKFDEKIEAVITTRQYRAPEVIMGQNYDCSVDIWAVGCILFEMATGDQLFKFKSSRFKDEDHLAMIKETFGKLPARKGTNLKKCFNNKGHFRNIKKLDIWLIEDVLCEKYRFPRKEANAFGAFLRKLLEPNPELRVTAAKALELPWLKQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AG47</accession>
    <name>A0ABV2AG47_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Nuclear transcription factor Y subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_000573</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the NFYA/HAP2 subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000097">
        <property type="protein sequence ID" value="MES1918631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.2430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001289">
        <property type="entry name" value="NFYA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02045">
        <property type="entry name" value="CBFB_NFYA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00521">
        <property type="entry name" value="CBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51152">
        <property type="entry name" value="NFYA_HAP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1918631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="115" mass="13746" checksum="EFF559C38C811999" modified="2025-10-08" version="1">MTDFNTILIEDEKEVKIDEFNPIDFLFEQTKPENAEGTKDLSAKSVAVNPKQYRRILLRRQWRDKFYKRRKIIKQSRRKENALNRSRDKTGMFLQKKSGPVEIDQLLLDTKNSEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR6</accession>
    <name>A0ABV2AGR6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Clathrin/coatomer adaptor adaptin-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_000750</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000140">
        <property type="protein sequence ID" value="MES1918853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050840">
        <property type="entry name" value="Adaptor_Complx_Large_Subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22780">
        <property type="entry name" value="ADAPTIN, ALPHA/GAMMA/EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Clathrin/coatomer adaptor adaptin-like N-terminal" evidence="5">
        <location>
            <begin position="3"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1918853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="403" mass="46657" checksum="507D33BFDD764A6D" modified="2025-10-08" version="1">MLSEHAIVKKKAIMCAAKMMRKVPDSIEAINFHKMKLFSEKNNSVFLTLCHLLQELRNYENYETQLYQAKQQLSYFEKFFKKLVTADFNPDYSVNGVNDPFLQVKIIQLLKSFRPGRNGSKEEFSTVIQIASSAENSSNSNGARLFECVKTMLSHVSESCFKAMAIDILARFLNSKDNNFKFVSLNTLSDSIREKEMILQHQFTIMDCLWDKDSSISNRALDLLHNLTCEKNYKITIKEFLKFMSKKNLDSESSKSLLIKIFNTLEKHEKDSKRYIDLLSAAISKTSKTDEFVNRKFSNFIKRGDAKTQKYFVDKMAETIFEHISEPILNLAFWGMGEYFDLAETQNKKKIIKAMDLIGADPLLVLSEKSIYFYANTLFKILLANNKKLRFQIKSTSLKFIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH60</accession>
    <name>A0ABV2AH60_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000539</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000090">
        <property type="protein sequence ID" value="MES1918592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="102" mass="11625" checksum="F29228B6073C91EC" modified="2025-10-08" version="1">MVDLEKNESKTVKSVHKIILSHLANKKFKRLNGEYAILLIYKPKLNNNKGCYMSRMANFELTNTLLATQNPGLISNLPKTGPFASKPKVTSKKWNKTILLFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHC4</accession>
    <name>A0ABV2AHC4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein transport protein SEC23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SEC23</name>
        <name evidence="3" type="ORF">MHBO_000945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasmic vesicle</location>
            <location evidence="1">COPII-coated vesicle membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the SEC23/SEC24 family. SEC23 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000193">
        <property type="protein sequence ID" value="MES1919076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1670">
        <property type="entry name" value="beta-sandwich domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037364">
        <property type="entry name" value="Sec23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006895">
        <property type="entry name" value="Znf_Sec23_Sec24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036174">
        <property type="entry name" value="Znf_Sec23_Sec24_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11141:SF0">
        <property type="entry name" value="PROTEIN TRANSPORT PROTEIN SEC23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04810">
        <property type="entry name" value="zf-Sec23_Sec24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82919">
        <property type="entry name" value="Zn-finger domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="1" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="1" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Zinc finger Sec23/Sec24-type" evidence="2">
        <location>
            <begin position="53"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU365030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="118" mass="13364" checksum="567A1CEDF80D52B7" modified="2025-10-08" version="1" fragment="single">MEFEKVEAKDGIRMSWNIWPKTKADAAKLVIPIGCLYTPLKNVTGLGKVNGHPVFCKGGHCSGILNSYCQVDFTNKIWVCPFCFMRNHFPISYNAISQQNMPPELQQNYSTIEYCIPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHD6</accession>
    <name>A0ABV2AHD6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000977</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000202">
        <property type="protein sequence ID" value="MES1919113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="178"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="350" mass="39534" checksum="0CF23FE2E03FF35C" modified="2025-10-08" version="1" fragment="single">MVLYYYDPNSKYISGSKNQVLENQRALNLKSKNPEELKKQQNDFKPKNAPEPQKNNYLKNFDYNGFEPQKTENVKINVKTDLVNSQKNINLKLSNKPITGRPKLNNLDYSPKEQNLTMSAKERVGKIVNESSSKTTKFQQFEKKIVQPKMKKAPVVAPPHKISSVINAPPQKVVVDLNSDSPAPNQNDPAPKQNDPSLTQKEPVSVAEIKDYVPPSEMIVRIVCNFYDKPVGSPIWQKGEFQQKASTGYSFRLSDGTVMVATNGHAVKDCLTTADKKKMVTIVNHLNESFPGEVVMENDYTDLTFIALRENENEEMEVKAASRLREAAVDIPKNPRNIREIKFPSLRTGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHF2</accession>
    <name>A0ABV2AHF2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_000992</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000205">
        <property type="protein sequence ID" value="MES1919128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="23641" checksum="FAA0AC686A0559C7" modified="2025-10-08" version="1">MNTIQYLIFTLLFHHYFTKDCPQLVNQTARNTRFLFPCDMNSPYCIEVCRECFRPIKGDNNRTCDFRTGNWDGQNLNCTSTDCEDFSPVGQFDSMELVNPLCVSTGKCQVACKNLSIQKNENDEIVCSPFVDDNGNCSLKWKFAYKENKENIECESSSLYGGYVALLVMGYTLIIGMLSVCIIQAEKEKKRKANLKNQTDEADIVTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AHT1</accession>
    <name>A0ABV2AHT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PhoD-like phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000231">
        <property type="protein sequence ID" value="MES1919225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.70">
        <property type="entry name" value="PhoD-like phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038607">
        <property type="entry name" value="PhoD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043904">
        <property type="entry name" value="PhoD_2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37031">
        <property type="entry name" value="METALLOPHOSPHATASE BINDING DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37031:SF2">
        <property type="entry name" value="PHOD-LIKE PHOSPHATASE METALLOPHOSPHATASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19050">
        <property type="entry name" value="PhoD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PhoD-like phosphatase" evidence="1">
        <location>
            <begin position="12"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="19178" checksum="4DC7CC3F87C9F733" modified="2025-10-08" version="1">MLKNVQPIYWIEYKEEIKNLYREVYRETWKQTAQRIAMANASNLMISDDHEIADDWGEQPKHRDKKSLDYFVGVCAHEVYREYQVQLRSDLESMKLKGKDHYCYIYKKIAFVFIEMHTGNTIYYVFIFNNFFVNVDNYIVYKRQQINKNNFINVGNNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIC9</accession>
    <name>A0ABV2AIC9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000289">
        <property type="protein sequence ID" value="MES1919436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036020">
        <property type="entry name" value="WW_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00456">
        <property type="entry name" value="WW"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51045">
        <property type="entry name" value="WW domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01159">
        <property type="entry name" value="WW_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WW" evidence="1">
        <location>
            <begin position="35"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="WW" evidence="1">
        <location>
            <begin position="121"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="222" mass="26045" checksum="CC988D96D97D29F7" modified="2025-10-08" version="1" fragment="single">MTENKGIIEPKIIKDEKEEIRKDGKKSVQIERSEWWIISENNEKVYFYNAALKTTCWRLPEDFVKENLDAILKIRNKTGIKMPIDFKNTKPLEETAARNTETKKNKSNRQKKSQRIPKTEWWVIDDPEAPKIYFYNASENKTSWELPDEIKKIYNFTIKVKNNDIPSSPYTASNGDYNSLGDLATTNRNIHKSRYSDGMDKTNLHKEALIRANENYLSLNIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AID6</accession>
    <name>A0ABV2AID6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000285">
        <property type="protein sequence ID" value="MES1919425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="210" mass="23262" checksum="403287ED208BBED1" modified="2025-10-08" version="1">MARVRKILATIARNNCNLEYRSEAGLGGRKAVVVLGVSDYSNSHINRLRSDFLRAAGSDALAIASESTASPLEKVLVPRAAFAVGEFLSHHGFDAFVVLDDLAMHSKQRNELLRFLSPRQQGGGRHEADQHLRDAPREVRRLRDGARRRVLTANRSSLTAICAASKNVVGKTNRLFYDAWADLESNCDSSLHLDKIFVDTDLNSARFAKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AIY2</accession>
    <name>A0ABV2AIY2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001422</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000345">
        <property type="protein sequence ID" value="MES1919624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="70" mass="8422" checksum="69946E00F4BB54D3" modified="2025-10-08" version="1">MKGHSVFRSMMKANLRTYGVVFAIGTIMTNLNMRKSRRNDYLMKADEMNNYNPHNVHRRKFVEEMRKNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ34</accession>
    <name>A0ABV2AJ34_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001472</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000365">
        <property type="protein sequence ID" value="MES1919685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050611">
        <property type="entry name" value="ABCF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211:SF14">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19211">
        <property type="entry name" value="ATP-BINDING TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ABC transporter" evidence="3">
        <location>
            <begin position="74"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="15"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="158" mass="18202" checksum="05E7376036155BEE" modified="2025-10-08" version="1" fragment="single">MARKNRKKEKKNKKKANEQSKQNDEKAENRSQKAFDFLRNLGPDGYMRASESLCKNVLIRNYSMSTPDGATPLLENVDIKLNFGRKYVLVGKNGYGKTTLLDNLAFYRVEGFPTHVRMVHVRQECDKNDPRKVIDAVLEADVVRLQLLAEAERLENQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJ93</accession>
    <name>A0ABV2AJ93_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_001534</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000391">
        <property type="protein sequence ID" value="MES1919761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="82"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="90"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1919761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="20458" checksum="EE580718C2F83EFF" modified="2025-10-08" version="1">MSYIKQQTETKQFQKSSNYEDHIAKLEQMRKKRVDQIMRSEEKKGYGSNSYFSDMRQNQIPSYQKEISQYNRFDNKSYNRYENRYDSNSHSRARNSGYTTQKSSFNTAQTNPNIYNNAQMNQENIYGNIYGTQQLGGQYLLNNQSLMAYPPNYINPQYTAQNDGTGNGVKYSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJG9</accession>
    <name>A0ABV2AJG9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal protein S12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001228</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000274">
        <property type="protein sequence ID" value="MES1919387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006032">
        <property type="entry name" value="Ribosomal_uS12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005679">
        <property type="entry name" value="Ribosomal_uS12_bac"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00981">
        <property type="entry name" value="rpsL_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11652">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00164">
        <property type="entry name" value="Ribosom_S12_S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01034">
        <property type="entry name" value="RIBOSOMALS12"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00055">
        <property type="entry name" value="RIBOSOMAL_S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="158" mass="18172" checksum="2C70D0ADFE5D1919" modified="2025-10-08" version="1">MHLLNMTAKRLNKLLPGPPIFENHFNLFAFSRKFLTLPKRKPKKRRNARKIKELEKAPARKAIVLKVTTKKPKKPNSAQRKVAICKLTFNNKTMTAYIPGEGHNLQQHSVILVQPKRRKDIGTKIEAIRGVYDLAGVEGRVRSRSRYGTKKPPKEKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJJ9</accession>
    <name>A0ABV2AJJ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001255</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000282">
        <property type="protein sequence ID" value="MES1919417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045099719" evidence="3">
        <location>
            <begin position="24"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="268"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="173"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="300"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="173"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="216"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="229"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="327" mass="38188" checksum="065DD42904156A18" modified="2025-10-08" version="1">MALKKLFICYLMLFFSATLTADAEANDADTIDLDDDNEQESIKEDTVKIAIFFHGKTNLPQNIRDFISGDMKYYPHVMFRDIGEDPAKLRIFKNEQMAAMYLLNYATKHSPDNEAIRNLKGFGIGANVEDLATLQLASYNLEGLSVGEVERRLAENGFEKANTIEEKLAIEKEVSDEKEAERAKAKRRIEEKEKLTKTQRKKEMDQKEKMRQIRNKERRRKRLERRNRKNEGKRAEEIKRQKEEEKFEEEKKKFKPRFRLGENVGMNLPIPVFIAISALMAGAVLFVFKSLCGLKNKRLEEERAKSKKNAIKEKRRMEKDSKRLSNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJL3</accession>
    <name>A0ABV2AJL3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="11">GPI transamidase component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">GPI17</name>
        <name evidence="11" type="ORF">MHBO_001269</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">20-A016</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PIGS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000288">
        <property type="protein sequence ID" value="MES1919432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019540">
        <property type="entry name" value="PtdIno-glycan_biosynth_class_S"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21072">
        <property type="entry name" value="GPI TRANSAMIDASE COMPONENT PIG-S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21072:SF13">
        <property type="entry name" value="GPI TRANSAMIDASE COMPONENT PIG-S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10510">
        <property type="entry name" value="PIG-S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0337">GPI-anchor biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="458"/>
            <end position="479"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="MES1919432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="488" mass="57176" checksum="0741634F49CC2345" modified="2025-10-08" version="1">MARSFFLYSFLTIYTIYIIIGIKFLKVHREKLPETAKLKKSFNVPLDINLHFIGFTGNFVKDVDTQSQKLSLFINEKAKKNLLVKMHFFTSKEIPNKKLEGINNFYVVTNKESSRKFQNINSTWTLLEDSSAILKIDQNFEIGRFWDDFVDFLKNKIFLTKNKTTVNNSKTFDLLNENKYIFSFSLLNSLPSDLVFTWNFDDIYQKYLRTFLDKMSFLDIKIDAQIKNYGQISKNRYLFDSKDSKFYLKKKNLNSFIGKTRWNSKSLDPEYQTVNFLVFVPPLEKQPLEIRTTKNKAKAFIVPKWGGVTIWNVPKSARSQCKNNICFVQSEEFLPQMETFAYQIRLMLGLEDNGGANGFNEMELQAICIERILRNIKKFKEKIFSLYTQFDTLQQLPIRKEVSLLIRKSMDHYENAEKECAESDLKNCLKSSMSALELISKAYFDSSIVSKLYFSTEYVLTIFAPYLIIATIPVLKAVFADVKKWMRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJP1</accession>
    <name>A0ABV2AJP1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001292</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000298">
        <property type="protein sequence ID" value="MES1919462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1919462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="126" mass="14574" checksum="56DF284C20069A81" modified="2025-10-08" version="1">MLATIIIISFDDILLNDTVENQMLFLLVLSHFFNCIASSRNGFPLWDSDYNNCLIQNKVDSMCNSTILRNCCTNLCNRKFKNPGMVADKKFTKCLNFTRLRNTLLPFTAKEPFTYTWGTCYCVEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJV9</accession>
    <name>A0ABV2AJV9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Carbohydrate kinase PfkB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_001702</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000461">
        <property type="protein sequence ID" value="MES1919960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10584:SF167">
        <property type="entry name" value="PFKB DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10584">
        <property type="entry name" value="SUGAR KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="Ribokinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00583">
        <property type="entry name" value="PFKB_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00584">
        <property type="entry name" value="PFKB_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Carbohydrate kinase PfkB" evidence="3">
        <location>
            <begin position="1"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1919960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="35525" checksum="0055C10EEA599337" modified="2025-10-08" version="1" fragment="single">MAKIAVLGDICTDIQTGPLNTLPTWNRGRKADTIKLMIGGSAGNTARYLGALGKQTRLFSVLGDDDVSRLNVLKLKEENLVSIDGSVVQKENDFAPIAIVLFGMNKRQFIIYSGSLKSFTVDDINSKLVFENDHLHFGGYFVCPGLHNDKLIEFLKQVKARGITISMDCQGKGTQKWTSKNNHLRKVLPFLDVFMPSSYEALGITNTTSVDEAIDELSKLVPETLLIIKNGEEGVVLSFPKRLNFAGGNVKVPTEKVSVKDVTGAGDAFNAGFLAKWVEGLKRTSPKDLDKEIYAKLAIESAEHGCHLGSRCVQEQGAFVKSVCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AKW4</accession>
    <name>A0ABV2AKW4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002007</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000610">
        <property type="protein sequence ID" value="MES1920325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16517" checksum="F74D24C6F0502486" modified="2025-10-08" version="1">MAIYLYFFPVDAAASIHVGGEKKSMRVYMSRKSKVAIVIMTVLPKVAIVVLLTLFGCGIVLESSDSGALELLQNALAVAFVMEIDEILCRNLVQTYLKDIIDALPRVCWQEKASEKVLRNFFLNLIFCGAYSIFIWVLYCFWLFSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL85</accession>
    <name>A0ABV2AL85_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CCAAT-binding factor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002104</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CBF/MAK21 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000670">
        <property type="protein sequence ID" value="MES1920436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005612">
        <property type="entry name" value="CCAAT-binding_factor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040155">
        <property type="entry name" value="CEBPZ/Mak21-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12048">
        <property type="entry name" value="CCAAT-BINDING FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12048:SF0">
        <property type="entry name" value="CCAAT_ENHANCER-BINDING PROTEIN ZETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03914">
        <property type="entry name" value="CBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCAAT-binding factor" evidence="3">
        <location>
            <begin position="399"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="604"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="613"/>
            <end position="624"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="633" mass="74003" checksum="E27CA4CD5E6E6C3A" modified="2025-10-08" version="1">MVSETFSSGFMSFGKKDRKSVKVDLSHITKKPKRSLKNGNPDIAKKAISSKQNFIQNEPFPKMPKEEKLKIFEDLNIKTKLKYTPKKQNYNNLDEALKRAKMLYEEEIKIFSTKQSKNLLSLIDKKGAAKDKIYSSISKIIDSPLHQIDLLHQLINRFSTQKPKHSVVIAELLTDLFINNLLPNRKLSNFKNNFSKLATNSDKALLAFHYEDLLKREFCVFTDNCEKILSETNFEWYQVKILTFLFQILKSKSEKEEEILCALTRLIFSNNKTIIAKTLLYFNSLFREHPGMKIEVFKEIEKFLNSKNNKNSFYAVVLISQFRYSKHEIEKKLAIRTIKTLLNLFSKLNFNDEKTFKIASTLFCAINRALPFTDNFDFSEKQLDALYKSTHLPHLPTIIQSLSLLFNIYSKNLQFPDRFYNALYSSMLSTTLENAQNKHTIYLSLIYRSILKDADECRILAFVKRLLQLCALQSDSFSCKALITIFELTKTKKFIKNYLFDNEKNFKECAKSYKYDARNPRHSFANGEQMVEMRFLERHINPIISKMASQIVQNNQINFETEFSNSDFVTKFASNEIESLSENFEFAKKFLEIKKGQFDKNEKIEIEERSESSDFEFESEETESEPNLLSLSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AL87</accession>
    <name>A0ABV2AL87_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Gustatory receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002096</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000665">
        <property type="protein sequence ID" value="MES1920428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="258"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="288"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="335"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="368" mass="41474" checksum="D4E21D2BEC014AEF" modified="2025-10-08" version="1">MGYMVSWCKGIADKEEIKSALMSFRANETILFWNEVIYVFASVDGIALFLSVTFLILFPRRFPNSDTALVFVQIALLYSSIVIYRNDVIREAVYPREDLGFAVIEPKANLLRGVTFAGIAAQSVLLLLLATLSSVSGNIEPVDGSVFGREKDQNEGNLPETTRFTAGKFFVCVVLFAVLYFMHSSGVQNWVEVHYSDFDHVKSTKLTATGICAKMAKPEVLAKLEIETAKFIEKSKNFNSNFAESLQKAFFTNFFDKFVFFVPILFAVFYLFFSTFVSVKEADQIKILLFLIVLNISNLIAFNSFVVIIENNVDAWPGGFYEIIIDDGFSDLNTAALMILFCLLFELIVFFAPVQVPLMNQEEKELLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALD1</accession>
    <name>A0ABV2ALD1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002141</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000690">
        <property type="protein sequence ID" value="MES1920476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="17"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="300"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="542"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="656"/>
            <end position="688"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="35"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="302"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="313"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="331"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="542"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="679"/>
            <end position="688"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="688" mass="77890" checksum="A7E999017BFB931C" modified="2025-10-08" version="1" fragment="single">KFNFLCTEFFIDRMDTNKNNLTPAATKNGRTRNNAPAAPQSAQSVQSEPQSTHANSNGKLPRRSSSAEHSPRSKPAKKKNRNEWDRAITDSATFKNANPAPPRTPRNTETPNPAKPKPPTPKSKPFKKSDSKNSKFARKQSHKKQRTKQSRKQILQFFPEKQSAKLTPKTAHFPQFKSAPAPQTAIQIGAPSPYPLAQPNKIFSKASVIAQSENFQVSVNRNHNKSPLSFKKPSPRIESLYTKNALESKFLAKLNLPNSIFEQKEYSKGAPRNGPFAQKTVFAPKKPTFNINAAEFNPSSKTKKEFIDKISSRDANSSSAKRNNALQIKNPRTDKIVDVESQKQDEKAGGEKGGARNVEINEKSLAELGSGKDVQRATEFVGSETKSVDGQILFKKKSLDEKATQIKDLFKEQVLKAAKSMKKDIGLKTGDDLQKNRTSRNLPKLSKKSEVQDIKEIVAKTLKNINVEIEKPKIEKIEKPKIENNFGKTKIEKSKNAMDEFKKQILKINEIKKQNEIKKQSENEAYEEKINLKLLEKLKKKQALTDEDRPIIEKEKTKKPKLPSPKSPISRQPNILEKTHFITEEKRVKKLEGIELAHFKSKSKHQNQEPILSARKDTFSKGAIPTHVARQNKVLEGNHREPESIKLQLEKRIERRRRRKISSNLSTNLGKSKILGASPKDEEKHFRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALK1</accession>
    <name>A0ABV2ALK1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_001880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000540">
        <property type="protein sequence ID" value="MES1920182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.10">
        <property type="entry name" value="Porin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023614">
        <property type="entry name" value="Porin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001925">
        <property type="entry name" value="Porin_Euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027246">
        <property type="entry name" value="Porin_Euk/Tom40"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11743:SF70">
        <property type="entry name" value="GH26960P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11743">
        <property type="entry name" value="VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01459">
        <property type="entry name" value="Porin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="309" mass="34713" checksum="81D78D2BC8282B59" modified="2025-10-08" version="1">MSSCAVNQKEGNCCGSVQKCASGYSRITNATKEIFDECLQRYSDQNPIVRINLKGSDRCSTSFKIEQKDELRGLIEQKVKIFDKTNMKLSLSDDQKMNLVLQTSQLVPNSCMSVNLHTHDSTKFNFGYCHRLFSTNLEILKSICGHISANPSLVVTYKNMSVGTKLSLKADWPYAKMVNDLNFAASYRYKKTVASIYTTEKASKLNAEMTHRLCEGVLLGFSLSSDYKKLKETEARFGAKIKCNDNFEVRAMMGSDGKLSSAFSHRLSENMAMSVFSRLNLLDKKESAKVGLLFDLNADVRCKCKEIHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALR9</accession>
    <name>A0ABV2ALR9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FACT complex subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SPT16_2</name>
        <name evidence="3" type="ORF">MHBO_002262</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the FACT complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M24 family. SPT16 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000761">
        <property type="protein sequence ID" value="MES1920611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="entry name" value="Creatinase/methionine aminopeptidase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="entry name" value="Creatinase/prolidase N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040258">
        <property type="entry name" value="Spt16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13980">
        <property type="entry name" value="CDC68 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13980:SF15">
        <property type="entry name" value="FACT COMPLEX SUBUNIT SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="Creatinase/aminopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0158">Chromosome</keyword>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Peptidase M24" evidence="2">
        <location>
            <begin position="161"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="390" mass="43469" checksum="B9B3FBFD3E3DA31C" modified="2025-10-08" version="1" fragment="single">MPQDSLNVGNLSDKIDKLRSVQSSFTEELCSIIIVSESSSVDSYAKSSAVFIWLFGFDIPGSVLVYSFENKMLHLFSDKYANSNVFGDSGDLKTEKMSAFEESVKDEKFGTKKSVLFLKNKSGELFQKVFATIKSNFLLVECNSAVGKLLSVKTGKERNCAEKAANLCSAVYKYFLVPKIETVIDEDIKITHSTLSKSTEKIINTPNKVQINLNPDFVESCYSPIIQSGGEYNMKLSAESTSNPLKITKNAPVLISLGVRYKSYCCNMSRSLMFDPSEEQKRVYNTALCAFEAAVDALKPGTEVKRIWEIVRNVVEDKYPEKVDKLMKNCGFGIGIQFREPGFVIHKSNANKIENGMIFNLSVGFENLEDTISNTPYAIQIADTVVVEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT1</accession>
    <name>A0ABV2ALT1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000766">
        <property type="protein sequence ID" value="MES1920614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="13201" checksum="CA3FA1D6E988B873" modified="2025-10-08" version="1">MSNMGEPPELRINGIFGFFTDSWDLGVLLIYACCKVYPDGQNTEELLKFFRDNNKSYYYDQQFTPILKEKLLQTDYEKRLWGKELPKAADDAQLIKCFGKTKFEVLKINLHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALT3</accession>
    <name>A0ABV2ALT3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Kinetochore protein SPC25</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002278</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000774">
        <property type="protein sequence ID" value="MES1920626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="255" mass="30359" checksum="4FA7FFC5E7891140" modified="2025-10-08" version="1">MEIEKIIEQPINNQENIITERKANFLIEKLAMLKLKKRFLSDIMYKNKSDIVKLQKTNKQKTPKLQKKAKQFLTRRIDTLISQVQHEYNNFKKLEQNINSKKSKMERFLNFCEATEKSLAEMDKNEYRDPNSNSKKLEEKSPIERCKSILERQNFLIEKIEKNLNFPKIDFTEDFNDLEKEVKIENLKKAIQSFQAIFGLKMENFENGKLKVFGENGNLFKLFEEKNKIFVENEKFGKFSCDDFVSLLLSDIKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALY4</accession>
    <name>A0ABV2ALY4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000782">
        <property type="protein sequence ID" value="MES1920637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1920637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="325" mass="38022" checksum="E97F3100484E673C" modified="2025-10-08" version="1">MDDLSNKNFSNLPLKTKLVVLNEEKTAISPSDFVQMILKISREKRSKVMSKIKPSVRSKFLKSLSKDNLAKIVKKSNLIQKNQNILKTANAVKLPKNAFEKEINLIIKCLNEFKTNSNPNIVKLIRNEAFNFIEMLKNKDHFNIIDNYPIEYCVYKRSNLFHRKKQKTIQTDKSVKKMEKRNPKIEKIEKNIENFSLKNFDVYSKTLNSKIGHGNRLSQLNKISKKLNGDDYILFSKSRNLSLLGKKNLTIFKTLFGKAKNNLKFVCFLMWQHIYDIVETAILFSKTSQNKKIITNETIKKSTEYVNNELLVLKKKQFDQIMKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM76</accession>
    <name>A0ABV2AM76_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">AFG1-like ATPase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002422</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AFG1 ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000863">
        <property type="protein sequence ID" value="MES1920786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005654">
        <property type="entry name" value="ATPase_AFG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF040713">
        <property type="entry name" value="ZapE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12169:SF6">
        <property type="entry name" value="AFG1-LIKE ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12169">
        <property type="entry name" value="ATPASE N2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03969">
        <property type="entry name" value="AFG1_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1920786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="405" mass="47067" checksum="09B5D5EAE3B3836C" modified="2025-10-08" version="1">MKKMSEKIFPKLRTKTILPPSTRYKNLVEKSKIKFDEQQFSLVKKLDTFLLDLKKHHDELKFFAWKNSPISSILQSSTSLLKSNQFVDGIYLYGSPGSGKTFLMDILYKSIPFKNKKRVHFNKFMLDIHKKLHLYKNDPNSEKSDLVHSIVDEIKQKYVLICLDEFQVTDIADAVVLKELFTNLFENGVILFATSNRAPEELYKNGLQREQIFAPFLKKLGEHCTVINLDSGIDYRLSGIRITEIYFYPITAENTKKFKSAFKKVSKGEKVSKRILKTFGRSVLVPKAVKKIAFFQFEQLCDSPLSATDFQALAENFKIIFVENLRAIKSDESDILRRLILLVDELYNAKVVLVALSQVPMERIFEVDEKERASKDEVFAWERCLSRLNEMQTKEYLDEASRDDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMC6</accession>
    <name>A0ABV2AMC6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Phospholipid-transporting ATPase</fullName>
            <ecNumber evidence="12">7.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">ATP8A1</name>
        <name evidence="14" type="ORF">MHBO_002205</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>ATP + H2O + phospholipidSide 1 = ADP + phosphate + phospholipidSide 2.</text>
            <dbReference type="EC" id="7.6.2.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 12">Membrane</location>
            <topology evidence="1 12">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.1" evidence="12"/>
    <dbReference type="EMBL" id="JBDODL010000728">
        <property type="protein sequence ID" value="MES1920543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006539">
        <property type="entry name" value="P-type_ATPase_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032630">
        <property type="entry name" value="P_typ_ATPase_c"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01652">
        <property type="entry name" value="ATPase-Plipid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08282">
        <property type="entry name" value="Hydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16212">
        <property type="entry name" value="PhoLip_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00002">
        <property type="entry name" value="C1.7:_P-type_atpase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="610"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="636"/>
            <end position="654"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="693"/>
            <end position="720"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase C-terminal" evidence="13">
        <location>
            <begin position="571"/>
            <end position="667"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="721"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00034036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU362033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF16212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="MES1920543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="721" mass="82843" checksum="90B5F510265E926C" modified="2025-10-08" version="1" fragment="single">SEKTAELFVFSLIVLQFLLVVTGTILNYYFYKSDNNWYFFGFLPSTADYFLYIFSMYGLLSSLIPISLYVDIEVTKLFHAVAINIDSTMISKDTGESANTRTSSLTDELGKVKAVFSDKTGTLTKNKMNFFSCSLRGKRYLMRPTDNALSESNDEQSKVCPELEELLALKDKYALEFLSLTSLCHTVLPDFPDCARKHEHDLDCQSALHYQAESPDEKALLKMAKSHKYIFYNRQYDSVEICGSLSNIEIVTVNIFGENKVFKVLECFDFDSYRKRNSVLIEDGEGRIKLYMKGAENVVYKRLTEESKNELWDATSKHIDEFSKKGLRMLLCAYKSITKEKFEEWYQRYKDTKVKGDEEAVEKIVDEMESGLELLGATAVEDQLQDDVPSTLNSLREAGIRVWMLTGDKTQTALNIAKSCSLLTAQMRFFPNIVVVDIDEFKSDDEVYAEVTEKLRRAWDKIKHLEQNSPNQAFVVSGRTLDLFFPKNTQLKIRKMNEMQKMMIQIIQKSRVVVCCRVSPYQKSQLVDLYKLNYPKDITLSIGDGANDVPMLKKANIGVGIIGKEGLQASRASDFSINQFKDLKSLTMYHGAMNCSRIAKKINFYLYKNVFDNFANFLYIFFTGFSNTFLLPQDGLATLNLLLTLMTLFIIGITEKFLEKFVLESIQEKIPIDGRFCIKKDLITKNLILKEFLCCYFVCFIVICYFVLFVIMFFIMLTIVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMJ1</accession>
    <name>A0ABV2AMJ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Adenosine kinase</fullName>
            <shortName evidence="10">AK</shortName>
            <ecNumber evidence="4 10">2.7.1.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Adenosine 5'-phosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">MHBO_002191</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>adenosine + ATP = AMP + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:20824"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Purine metabolism; AMP biosynthesis via salvage pathway; AMP from adenosine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the carbohydrate kinase PfkB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.20" evidence="4 10"/>
    <dbReference type="EMBL" id="JBDODL010000721">
        <property type="protein sequence ID" value="MES1920527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01168">
        <property type="entry name" value="adenosine_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001805">
        <property type="entry name" value="Adenokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45769">
        <property type="entry name" value="ADENOSINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45769:SF3">
        <property type="entry name" value="ADENOSINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00989">
        <property type="entry name" value="ADENOKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="Ribokinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 10" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Carbohydrate kinase PfkB" evidence="11">
        <location>
            <begin position="28"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU368116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1920527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="302" mass="33446" checksum="073895B27AC4BCF2" modified="2025-10-08" version="1" fragment="single">MSTRAQKSFVLGVGNPLLDIQANIDKEFLEKNGLKMSNAILVEEKHLHLFDEMKSKESVKFVAGGSTLNSVRVCQWVLGKSHKNGTSFIGCIGKDKNGQILKEYSEKDGVRTYFEEDETAPTGVCGVGILDKERTLFTRLAAANNFSVDFLDRKEVKKEYQLADVIYISGYFLTVSIESIILIAEHSSKNNKILAVNISAEFIAQIYKAELEKVLKYADFVFMNEQEAASYAKYVAGNNKLSLQEVAKKIATLPKVNQTERTVIITRGSQSTLVNCGGDIFANVKVDHIEEDKIVDVNGAGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMK8</accession>
    <name>A0ABV2AMK8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Mitochondrial import receptor subunit tom22</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002204</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000727">
        <property type="protein sequence ID" value="MES1920542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="54"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="12573" checksum="D4A1B3D26ECEC8F6" modified="2025-10-08" version="1">MQDSVAIKEINSSDDSSRDDSNDWSDSEDGFDFDELKERALKTKEYILHYGSKILKISLSTAFFFVVPILVGSIIEKEASEQRKQFEEGNVDMGAPVNMVDLKGSSNIPETF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AML6</accession>
    <name>A0ABV2AML6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Clathrin/coatomer adaptor adaptin-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002394</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000846">
        <property type="protein sequence ID" value="MES1920754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017106">
        <property type="entry name" value="Coatomer_gsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10261">
        <property type="entry name" value="COATOMER SUBUNIT GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10261:SF0">
        <property type="entry name" value="COATOMER SUBUNIT GAMMA-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Clathrin/coatomer adaptor adaptin-like N-terminal" evidence="1">
        <location>
            <begin position="91"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21956" checksum="CB7842B38B7C2452" modified="2025-10-08" version="1" fragment="single">MFQSFLFLKNSEFTFLIRKSFFDIFEKQIYENLIKPTAFKRLICVLTTDKKFLKAFLDSALLGDSNRMSSYKKNEEKDLHWTTSIKKSQLLQKVKNFGKSGLDSTKCYDTVVKLTFLLNSDEKFSTSERSDIFFCSTKLFQNANPNVRRLVYHIISELEHDPEAAFMAINALLKDLTSLNSPKKFRANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMN1</accession>
    <name>A0ABV2AMN1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_002514</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000939">
        <property type="protein sequence ID" value="MES1920900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23139">
        <property type="entry name" value="RNA-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="6">
        <location>
            <begin position="120"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="234"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="20"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="39"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="52"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="71"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="235"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1920900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="400" mass="45012" checksum="69FFDC1E4ED95C2C" modified="2025-10-08" version="1" fragment="single">MPSVTRSRKSHRDSSDSDHRRRRKSRHRSRRSSRDSRRSRDHYKNHRRKRSASSSYLSSSYSSSSSDSEVVEEKEKPKKMIDPTSHTPIFPLDEQRMTIKEKMQHQAMITANPTATRMARRVYIGNLPTNLKFTETILLDFFTILIKFHGINTPQPVLSVWLSDPPAFCFLDMRSVSDTAKCITLLDNMNLGERNLKVGRPPDYTPAPIHLSNFVVGAVPLGFNIFKTIVDPAAHKGRKQSSRPQKPKNRNINVPFPATSGTRVKGDLIPVKIRPTIDGGTLVNPAFPEDAELVNKNDPTKMKREELFADLPGDLREAFIEALPSSVNIEPSLLDVDVLPSRPCPPSLVIAIDNMVRAEELVKNDEYTDILYDIRLGAQRYGDVASVVIPRPGHSPGEFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMT6</accession>
    <name>A0ABV2AMT6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Lipocalin/cytosolic fatty-acid binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002351</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000817">
        <property type="protein sequence ID" value="MES1920708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012674">
        <property type="entry name" value="Calycin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000566">
        <property type="entry name" value="Lipocln_cytosolic_FA-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08212">
        <property type="entry name" value="Lipocalin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50814">
        <property type="entry name" value="Lipocalins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipocalin/cytosolic fatty-acid binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="71" mass="7763" checksum="0A779AADE8FFC7FF" modified="2025-10-08" version="1" fragment="single">MGKWYEIARIDNSFEETCGDGDDAPIAYYSLDKKGSIDIVNTCTKAIGGDKMVAKGLGFVVDRENNSKLQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AMY9</accession>
    <name>A0ABV2AMY9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">XMAP215/Dis1/CLASP TOG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">MHBO_002635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001042">
        <property type="protein sequence ID" value="MES1921034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048491">
        <property type="entry name" value="XMAP215_CLASP_TOG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21041">
        <property type="entry name" value="XMAP215_CLASP_TOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XMAP215/Dis1/CLASP TOG" evidence="3">
        <location>
            <begin position="94"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF21041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="MES1921034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="228" mass="25932" checksum="A485B9515C1FE151" modified="2025-10-08" version="1" fragment="single">KISYYLKMSAENEKIAASSRSGADFYEKMLSKMGCDENSIPQFSNTANTLTNILSNSNVDNEIKPFCKDQKKNEALLLYERAVSSVTGKEKEIDFDKLSIDELFESKSLKHKIFGFNKLRKIFQNDKSNNFENHFKIMTKIGSFSNPLVLKAGKNCFETFIENAPNEIFVSTAEETFESVIKNLFQSPKLCSFGISIAEMIVTKARQIGDMEIFEKILNIVTAIFFDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AN37</accession>
    <name>A0ABV2AN37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002667</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001064">
        <property type="protein sequence ID" value="MES1921075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="90" mass="10788" checksum="33DF4E2F58C6DC9C" modified="2025-10-08" version="1">MEYFFKKPFEKEFCIDTTKEKKWLEKECKIEKKGREKNLKNFEIDLDAANLMKLSDLQNKYFPHVPANIVAMCFKSFGCNKDEAMFENFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANB0</accession>
    <name>A0ABV2ANB0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ribosomal protein S4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002599</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001004">
        <property type="protein sequence ID" value="MES1920994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1050.10">
        <property type="entry name" value="Ribosomal Protein S4 Delta 41, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="entry name" value="RNA-binding S4 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55174">
        <property type="entry name" value="Alpha-L RNA-binding motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50889">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="269" mass="32020" checksum="2B3AAC4E572B2DA7" modified="2025-10-08" version="1" fragment="single">MLLNIRKHSHRHLITIFGNSKFPQKSLFSSQEDLDKKDIPDDPEQDWDTKSGFQQMEEEEELEQSSFLPEVSFRPLTHNKQPMKIPRFQMTDPKNYFRMRFDARRILRAYYGIRFEKELKKIYVKLNRNKRHRRNSHLKMVDILERRFDVFCYRIGYFDSLEDARRGIKKGFLSVDGAVKKKWRYYLRDGDFITLNFSKKFSYLQVQERIKGRIRLGEETDGLGKNGVSPHVGLNHFDFCYTTLSVNFVGSIASLERTIPSGQYFCSEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANE1</accession>
    <name>A0ABV2ANE1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002760</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001141">
        <property type="protein sequence ID" value="MES1921193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009829">
        <property type="entry name" value="SKA1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07160">
        <property type="entry name" value="SKA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="115"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="47"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="174" mass="20499" checksum="B7A21EC66B8234BE" modified="2025-10-08" version="1">MASENKNKVELENSTLEKMLLKTKFDKIENLIKIRQNKHNSMLHDKYNFWEEKIKEIIENFENVKNKIKLEQTAILKIKGMLSKAEEQNKKLKHLKNNIPDDFSDIKQKVIKKKALKSDKKSKMSKNSAPIKEPNPTIKETANFKIQKINEEEFKKVPKFSIKKIVFAKIFSIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANJ4</accession>
    <name>A0ABV2ANJ4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">U6 snRNA-associated Sm-like protein LSm4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">LSM4</name>
        <name evidence="12" type="ORF">MHBO_002787</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Binds specifically to the 3'-terminal U-tract of U6 snRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">LSm subunits form a heteromer with a doughnut shape.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the snRNP Sm proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001170">
        <property type="protein sequence ID" value="MES1921227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01723">
        <property type="entry name" value="LSm4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034101">
        <property type="entry name" value="Lsm4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027141">
        <property type="entry name" value="LSm4/Sm_D1/D3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23338">
        <property type="entry name" value="SMALL NUCLEAR RIBONUCLEOPROTEIN SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6 9" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 9" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Sm" evidence="11">
        <location>
            <begin position="3"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="88"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="MES1921227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="113" mass="12650" checksum="B08D7433107D5FF7" modified="2025-10-08" version="1">MILPLALLNAAKETDAMIELKNGNTYNGRLTKIDHFMNVVLGTAICTFKGGSEFLQLKECYIRGNSIRSIQIESSLLEKAAAISGRKRMRRFRGRGRGRGRGKTTNKRFAKTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANM7</accession>
    <name>A0ABV2ANM7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lon protease mitochondrial</fullName>
            <ecNumber evidence="2">3.4.21.53</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">LONP1</name>
        <name evidence="2" type="ORF">MHBO_002823</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.53" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010001206">
        <property type="protein sequence ID" value="MES1921270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19500">
        <property type="entry name" value="RecA-like_Lon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.5270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054594">
        <property type="entry name" value="Lon_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027065">
        <property type="entry name" value="Lon_Prtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43718">
        <property type="entry name" value="LON PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43718:SF2">
        <property type="entry name" value="LON PROTEASE HOMOLOG, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22667">
        <property type="entry name" value="Lon_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="1">
        <location>
            <begin position="186"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="409" mass="46251" checksum="A72334635E4393FE" modified="2025-10-08" version="1" fragment="single">METVEQIRNFVGMLFPNEPIGLQRILEKKSVSSSIDEMMAFVTEQSIKLKVSTNASKSLMSNYIENHKRAYYKKMIDEINKEIGDAKPDNKYVSGITEKMPENVRDVIKEEIEKLKMVGQSHAESESIRNYLDWMIAIPWGKYSEDNLNLAKAKKVMEEDHYGLKDVKDRIIEFIATAILRKSVAKGKILCFVGPPGVGKTSMGRSIARALNRSFVMLSVGGMTDQHEIKGHRRTYVSAMPGKVARLLKQAKTANPLIMIDEIDKIGHNSYRSNVSATLLELLDTNQNHEFMDNFMDVPLDLSKALFVCTANDGSAIEPVLADRMEFITLSGYTHQEKRCIAERYLIPKVLSDTGILLKQCSVTNEALDYILRWHCREAGVRNLDRALQKIFRKVAVKLVKEGDKANDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP08</accession>
    <name>A0ABV2AP08_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">CDP-diacylglycerol--inositol 3-phosphatidyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_002761</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001142">
        <property type="protein sequence ID" value="MES1921194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15362:SF4">
        <property type="entry name" value="CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15362">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="26"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1921194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="152" mass="17343" checksum="8929CCB53FD32E62" modified="2025-10-08" version="1">MAARNFSQCSRFGAVLDMLTDRISNLVLYFALSEFTPVFMFSVAAIDIASHWIQMYSKLLHGQATHKQARNIVLSLYYKKRLLMGFLCVGAEVHMISKLIFLKTDSKNLAFVANFLSNLTFIVFIAKTFVNLIQLIESCSDIAEFDRKDNKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP16</accession>
    <name>A0ABV2AP16_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002939</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001322">
        <property type="protein sequence ID" value="MES1921408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="137"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="147"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="179" mass="21066" checksum="21CB1C687BA46BA5" modified="2025-10-08" version="1">MSAIFEKVKKYFGATTFDESNSNELFEFFQIFYGEFRASLPVEKKREGKIKILKKKVKNILKGATEKKSENNDEKKEKGEKKIVKVVRKVKKKKRVNKKPKGPTMQEVIKEAAEKRKNVKTTEEDIAKREKEIKDFKNVKKSENDGEQWNNLQTTLKLEQKGFEPEERENSKDSESDWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APB6</accession>
    <name>A0ABV2APB6_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003037</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001431">
        <property type="protein sequence ID" value="MES1921511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13392" checksum="44A8B56159A8819B" modified="2025-10-08" version="1">MFYFPPVISKWIRSMKGYNIIFLRSHEVARKVLIFTKHNPKSFVGYSGLAIFALYLRSKHNLKKSDSMKDNEMFAHPKNRNLRDQWGHRLIETRPFFRRFLFVNNKKQTVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APC8</accession>
    <name>A0ABV2APC8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001446">
        <property type="protein sequence ID" value="MES1921529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="13721" checksum="EF16F5B2659B3536" modified="2025-10-08" version="1" fragment="single">NIDPASLANPGTLEPTPPEPTPPEPTPSIPDTGSSTKAGDVCHKWDEVNNGTTEENCNSCIAGKSSYNWPCNKRGLCDCGLESSISCHAFDPDHTDGVFDGDCKVCEFPNPKYAATWPCIDTVCACSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF4</accession>
    <name>A0ABV2APF4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001163">
        <property type="protein sequence ID" value="MES1921217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="141" mass="16556" checksum="32FEE31B2CD1C42A" modified="2025-10-08" version="1">MRCDINVGFPLTKFLNFSGSKKYSFGTLSSMSFFVIVISKSAIITSLASIFKEDNLEFLLNGNFLPLYFRFFTFIPVFKMFIVTKNFWQKTQKLLLTQRSALISGRTFLLIIYKNRYCHRLRHKLLFPKIAAFPLRNMVKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APF5</accession>
    <name>A0ABV2APF5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Calpain catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_003098</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001488">
        <property type="protein sequence ID" value="MES1921565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00044">
        <property type="entry name" value="CysPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022684">
        <property type="entry name" value="Calpain_cysteine_protease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000169">
        <property type="entry name" value="Pept_cys_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001300">
        <property type="entry name" value="Peptidase_C2_calpain_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10183">
        <property type="entry name" value="CALPAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10183:SF379">
        <property type="entry name" value="CALPAIN-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00648">
        <property type="entry name" value="Peptidase_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00704">
        <property type="entry name" value="CALPAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00230">
        <property type="entry name" value="CysPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50203">
        <property type="entry name" value="CALPAIN_CAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00139">
        <property type="entry name" value="THIOL_PROTEASE_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0788">Thiol protease</keyword>
    <feature type="domain" description="Calpain catalytic" evidence="6">
        <location>
            <begin position="3"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="348" mass="39464" checksum="7B71EDB450A2E3C3" modified="2025-10-08" version="1" fragment="single">MPKFLDRDFPPDRSSIFTKGQTPNVQISWKRLEDLVDVGTDLIASTSAEDIVQGSLGDCWLLASLTAIADNKKILDRIFNTKIVNSDGKYSLTFNIDGMDKVIQIDSYLPFLPNGLLYSARMEHEQIWVAVAEKAMAKCVGGYDRMESGDCEEALRDFTGCPTDTFDDKLDPGDYWQKLREYANSKDHLLTCGIDSSSIPNLPKVHPQILSNGLLMDHVYTILDARCHDETQTRLLKLRNPWGNLEFNGKWSDFSTAWNPSLRAFFGSKNDSNDGIFFISFEEFANFFNVVSYCDTRDGWNASRIKSKFVKNEIVDTDVLSLNIPEDSSNFLAIHQQDERVKNAKKHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2API8</accession>
    <name>A0ABV2API8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH dehydrogenase subunit 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003118</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001513">
        <property type="protein sequence ID" value="MES1921586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="195" mass="23683" checksum="3AECD86810E41D90" modified="2025-10-08" version="1">MEPILLFTYSYVHFYVMCTSVVFVALRRNKFPLKFRNRALLCLNMATTSLFGWAMVVLNTPFFEKEVSLFFKHLIKTVFITLINLVYIFRFLDLIAKSSKQRLFGIWINHRKQKRLEQKTGRFDRILMFCQRWNLVMFFLAFCLLMLYPAFLPFLHPVTMKINFYSKEYKPYFLYVILFSMTSFMLFVCFLIRFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APJ8</accession>
    <name>A0ABV2APJ8_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Arp2/3 complex 34 kDa subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ARC35</name>
        <name evidence="7" type="ORF">MHBO_003129</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the Arp2/3 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
            <location evidence="1 6">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ARPC2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001531">
        <property type="protein sequence ID" value="MES1921598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1460.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007188">
        <property type="entry name" value="ARPC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034666">
        <property type="entry name" value="ARPC2/4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12058:SF0">
        <property type="entry name" value="ACTIN-RELATED PROTEIN 2_3 COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12058">
        <property type="entry name" value="ARP2/3 COMPLEX 34 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04045">
        <property type="entry name" value="P34-Arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69645">
        <property type="entry name" value="Arp2/3 complex subunits"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1921598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="296" mass="34234" checksum="4C6DCF9DB72C5EEB" modified="2025-10-08" version="1">MIILPATNTILRQTVFKRLSQNKKEACEFTFSDFDSVSFRVSTPLEDKESLFIEMNVPFWEDIKDVGAQEGLEKFYGDFLESVENQTVRLKVAIDDFKDEEKSEEFSELVSNMKNNIICEVLKIRFRTVKAQAPPKAIAKIALREDTTIFVQSLNDRIFVHFALTFEGKTDKIIGNLFMSEFVETKRKLGAAPLCAFSSSPPLKLKSEIDENKYKDRTFLTLTLLPKHVETEEKITSAAESMLGFRQFISYHIKSSKSYFHQRMRAQVELMLKILNRAKVEKEKKSKTYSGKTFKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APL3</accession>
    <name>A0ABV2APL3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_003140</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC34A transporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001549">
        <property type="protein sequence ID" value="MES1921613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003841">
        <property type="entry name" value="Na/Pi_transpt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF037997">
        <property type="entry name" value="Na_Pi_symport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010:SF46">
        <property type="entry name" value="SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02690">
        <property type="entry name" value="Na_Pi_cotrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="124"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="193"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="237"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="263"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="382" mass="42434" checksum="F30C5422F4CA3563" modified="2025-10-08" version="1">MTTPMVDLIFEVNNCLLHVVSVEGNNLNPKNFFKFCATACAKELCRSGYVYNPNDRNGCPRCFYKNRTLLLGGILKTSKLSDNQSAGIAIAIAIVLIMTTLFLLTKVMSFGLKEQTSSWIKKALLRHAIVGMLVGCLVTMLIQASGITTSSMVPLVALNVITLEQMFPVALGANVGTTITAFFAALGEGEPSGLQIAICHFLFNFFGILVFYPIPYMRSLPLESSRALGYQVSKNRIYGILFILVVFFVIPGALLGLSFAKGGVIVGAVLLYGTLLFVFVWRQIRVRRPQWIPLWCPNVMKPNHREEEEAKEEMYEAKKDFSDNKSLDAMVPTNDNGNGENWELEEGSLRKTNESFNVQSLKLSFQIYLIIEHSKDQNSGAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APP9</accession>
    <name>A0ABV2APP9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003187</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001593">
        <property type="protein sequence ID" value="MES1921657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="114" mass="13199" checksum="E642921571B28B81" modified="2025-10-08" version="1">MNIFNFILAWDLIKNDKIKLSDCNKNIRYLSIMFKLLIILLSLKAINSLKYKLNEIVTGLPRAFEYETVYSNDDSNGKTRAAFSYYISVSTVEDYPIYFVAGLKEDVLNKPLDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APR1</accession>
    <name>A0ABV2APR1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003194</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001607">
        <property type="protein sequence ID" value="MES1921666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="72"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="219" mass="26079" checksum="581BC25F6A3FBE44" modified="2025-10-08" version="1">MPSEKNITFVKKQKDNENQKKVYKNKNDLIKTDYGLKFTNINEDDKENFSKKIKKENSTFWKQKFQTIFSEKIALEKELANKTKQINQLLQKLSKIDFEEKEHLQNTNKHLNEKIKLLKMNNATEINHSTHLKKALDAAIDQIDIFEEKMDKFGKMDDESTDLKNYIFEMSILYEASKDAILDLKNKLLFSERKWRFGKNVKIGKKGNKKEHKKVPWKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APX7</accession>
    <name>A0ABV2APX7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_002992</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001366">
        <property type="protein sequence ID" value="MES1921458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051183">
        <property type="entry name" value="U1_U11-U12_snRNP_70-35kDa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022023">
        <property type="entry name" value="U1snRNP70_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13952">
        <property type="entry name" value="U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13952:SF5">
        <property type="entry name" value="U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12220">
        <property type="entry name" value="U1snRNP70_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="7">
        <location>
            <begin position="98"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="47"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="47"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1921458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="173" mass="20034" checksum="B78D1A4011C4AD15" modified="2025-10-08" version="1">MAHFMPPSLLALFAPNPPIKHIKAPTKKKPISYTGLASMLHLVKKHASDPLPKKGATNEEKRARRRRKQKKINERMIEKRLKEWDPKNNKEIASDPYRTLFVARLSYKATKEDLLKEFNYFGAVKSVALVKDKKGQPRGYAFVEFKHKDDLKSFFRQTCPFVRGVQKDGRTPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQN2</accession>
    <name>A0ABV2AQN2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001608">
        <property type="protein sequence ID" value="MES1921667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="105" mass="12006" checksum="172C6F8C60106E9C" modified="2025-10-08" version="1">MQCHPKHQKTYNICLVTEAMIEETDRRLFIYPFSKTLTLPSINSENEFIENRGTYVLFITSKLNSNFIARQLIISVLYLSSASNNGAQSINTSTDSMSEYDLPVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQT0</accession>
    <name>A0ABV2AQT0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003542</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the VPS13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002100">
        <property type="protein sequence ID" value="MES1922026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026847">
        <property type="entry name" value="VPS13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16166:SF93">
        <property type="entry name" value="INTERMEMBRANE LIPID TRANSFER PROTEIN VPS13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16166">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="262" mass="29583" checksum="DB88576691F9B35E" modified="2025-10-08" version="1" fragment="single">MRQSVFEQMLSETDVFDKEVKPFLEMLLVMEKTLQTKSLLVFPYLSVLIQELDVKLEEKLFIELIKLYEEISELIFKDQKEKENVDYPIEDILKLPKDQPIFIATRLVHFNPLAFNISVQLASPSKLTESMNDGVMKSVAGIVIAGVNNIECVPLRFKALIMRNARGTMLTLVRPIALEYKQQLLYQTYKIVGALGVLGNPLQLVNNLGEGVYSLFYFPASGFIKSPKEFSAGISRGAYSFIQNSVKGIFSSAHLISSQFAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR37</accession>
    <name>A0ABV2AR37_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Signal peptidase complex subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">SPCS1</name>
        <name evidence="10" type="ORF">MHBO_003657</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Dispensable for SPC enzymatic activity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SPCS1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002272">
        <property type="protein sequence ID" value="MES1922142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009542">
        <property type="entry name" value="Spc1/SPCS1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13202">
        <property type="entry name" value="MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13202:SF0">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06645">
        <property type="entry name" value="SPC12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00045204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1922142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="83" mass="10026" checksum="A0ABCC48046749AD" modified="2025-10-08" version="1">MDLRVQKKMMWFYKFCISIFGFIGFVVGYVRQEMVMFLYITTAGYLLSVVVCVPNWPFYRKNDLIWQTGSIEKQKQKPKRKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARC9</accession>
    <name>A0ABV2ARC9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ubiquitinyl hydrolase 1</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_003755</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase C19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="JBDODL010002462">
        <property type="protein sequence ID" value="MES1922248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006:SF888">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="USP" evidence="8">
        <location>
            <begin position="11"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1922248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="258" mass="30098" checksum="648F186D341DF122" modified="2025-10-08" version="1">MTAKNKNKRPTGLPNLGNSCYLNSVVQSLRTLKTFKIYLSSCKISKNNLLEKKLIDQLKKLLIEPSKSQINGLFAILAKRSFFSPFVQEDAHEFLSFVLSLFPENNPFVGKLVHCNYCRQCDYYSDFRQEIFQSISLDMSFNSVFSGYKGTLFNHNDDSICEPNLRDLLQNYFKGGISDFSCKNCLSKNKIKEFEFDLFEMEGHRSPLDENIFDQLGYPLINPFVFKSEQNESERFLEYKNLQMLLKFYKTKFGNVKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARZ1</accession>
    <name>A0ABV2ARZ1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003694</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002346">
        <property type="protein sequence ID" value="MES1922178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="289" mass="32911" checksum="C9F5492DBA509E64" modified="2025-10-08" version="1" fragment="single">DSLRRHEFLSPRKTFPRAFLIDSDSIYVADAKWAVYKEVQFQIDSDNICLQHTCEDYEEVAKVCAVHAISSFTEKLRCITEAVPVNDISSIVHDAAWKSLAKENIRDICRETVIKSERETVGKVGSPSYISHFSPTVNRLKKVLVKESLKSVGQDLSSEICKGLLKHIQFKVQQNLQHNIENLKISIAEENLKGVVVVIGTIIVSFFLPLFRIIIAAFTFVYTIFASVDINSSSWRNKVADEIYQTVCNKRDELLKNVIREMEEICRKAIGELQKAHKIIKDQKGEIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AS31</accession>
    <name>A0ABV2AS31_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Transcription initiation factor TFIID subunit 2 TPR repeats domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003998</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002917">
        <property type="protein sequence ID" value="MES1922480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037813">
        <property type="entry name" value="TAF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057991">
        <property type="entry name" value="TPR_TAF2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15137">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15137:SF9">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25577">
        <property type="entry name" value="TPR_TAF2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transcription initiation factor TFIID subunit 2 TPR repeats" evidence="1">
        <location>
            <begin position="2"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="24778" checksum="758C2DB205CF8C75" modified="2025-10-08" version="1" fragment="single">YFYKCRVLAARTIILMGKNDDDIFNKNVKIVVAFYREKFFEKEKILKRNDFSDFETYFVRKKIDKVLAESTDSMNCNAVVAVKLLIEILEFNDNSNNKYKDDDYISHLIKCCSLLKIQFDEDMKKRLLKQLLRYIKIDQIFPSKNKKISCSSIKAIAVLDKNLQLPNRTQIDFMSLFIKFLRRLNFVFRFFISQKFNFFEDIKAIFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASD7</accession>
    <name>A0ABV2ASD7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003122">
        <property type="protein sequence ID" value="MES1922575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018228">
        <property type="entry name" value="DNase_TatD-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001130">
        <property type="entry name" value="TatD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46363">
        <property type="entry name" value="DEOXYRIBONUCLEASE TATDN2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46363:SF1">
        <property type="entry name" value="DEOXYRIBONUCLEASE TATDN2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01026">
        <property type="entry name" value="TatD_DNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="Metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01090">
        <property type="entry name" value="TATD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="125" mass="14702" checksum="3585244D17D52E8C" modified="2025-10-08" version="1">MSTVRLALLHTQEEVPLVLHLRGAREDTSRIVRVSVKRQCVTRWYHAYTIHVYCFPDGIEEYRTWRNDYTRLCFGFTRLVTNFKPEQILIIREIRGGDILLESYVPYFPPPLGNMIIPNILAGYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE2</accession>
    <name>A0ABV2ASE2_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">PPP6C</name>
        <name evidence="7" type="ORF">MHBO_004106</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010003158">
        <property type="protein sequence ID" value="MES1922591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047129">
        <property type="entry name" value="PPA2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45619">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="6">
        <location>
            <begin position="3"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="168" mass="19679" checksum="07779DF2F09B91B7" modified="2025-10-08" version="1">MSNKQISRFGQFLQIKKNVKLIDGKIFCVHGGHSPKISHIDQIRTITRFREIPVDDEFSDLLWSDPTDLVDYWGVNQRGTGYMFGEKVNKEFNHINNIELTCRSHQLTMDGFKYMFSDFGLLTVWSAPNYCYRCGNAASVVKFDEHLNRVFNIFVIFFNILNIFVIFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASE7</accession>
    <name>A0ABV2ASE7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003836</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002594">
        <property type="protein sequence ID" value="MES1922328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="68"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="117" mass="13445" checksum="DBE10D85DBF6C367" modified="2025-10-08" version="1">MGVIALIGLLVVIFSIYCTFYIFNKLCQRRRGRCENVSLSYHNIHKGLSAVNIIPELHTDGLETIRENLELSEEMREVCDHYERVEENVDDLKIDLINTSQCVDVISSVNDTYLNPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASK6</accession>
    <name>A0ABV2ASK6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">TOG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_003863</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002649">
        <property type="protein sequence ID" value="MES1922357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040122">
        <property type="entry name" value="Importin_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041653">
        <property type="entry name" value="Importin_rep_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10527">
        <property type="entry name" value="IMPORTIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18808">
        <property type="entry name" value="Importin_rep_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1922357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="239" mass="27304" checksum="9E536ADC9BFB4189" modified="2025-10-08" version="1">MLKVVEDVVKLNDESSLIEVFEDLIDMVNLNPKSIRLYFEQFVKLMSDAAMATNMSKEVRILALEFLVVLAEMDNGVYRRSELYVRRAFMSALVMMLEISDPPNWINDLDDESEEENEIYSEGEVAMDRLSQAFGSARVLKIAIPLIGKFLSHEDWKRRVAGLIAISQMAESVDNEHAEKFVRTVSAFYKDQNPRVVFSAIHCIGQMCEDFAPQIQKQLHGLVLPPLVEILKNSKIVKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ4</accession>
    <name>A0ABV2ASQ4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003175">
        <property type="protein sequence ID" value="MES1922599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="59" mass="7044" checksum="474F66163D556C50" modified="2025-10-08" version="1">MINYWLNTSYDIRIPNEEKIDISDLISKLPDGDMELANNHAVDLWIILYKRYSKYVNPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASR4</accession>
    <name>A0ABV2ASR4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003928</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002756">
        <property type="protein sequence ID" value="MES1922417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="57" mass="6084" checksum="B460BE1523EC3D6E" modified="2025-10-08" version="1" fragment="single">CLPVSCDGSAATNSHEYSTVLCDGFTRVAPGTSPLRRELDALSELVECVRVDLLQTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT25</accession>
    <name>A0ABV2AT25_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004326</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003766">
        <property type="protein sequence ID" value="MES1922802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="130"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="186" mass="20905" checksum="983F7EECABECC2BB" modified="2025-10-08" version="1">MRGVTSPFDGNKQIAAALISCFEANGMNIFRNILRKQLTLENVQHVICLTRNTMIGQWPVNRDAAINLAKIGLMSGVAVSGLVALTVLGDNMIQNMYKAKIEAFTYDIIKQHLSTTYANELKKIMHNFLGGDLEKEIDKLKRTVESMRKKVESFKKEESKLISLSTAISKIRISLKELENTDIIMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT33</accession>
    <name>A0ABV2AT33_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004363</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003845">
        <property type="protein sequence ID" value="MES1922836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="185" mass="21361" checksum="2CD75A02E1D39BD1" modified="2025-10-08" version="1">MEATCRVCSSCHLETDCPEKVRKCKNCSGEHTADSKLCPSFIAYKKRKIKTVGRNRFAALETKENMNSDKVDELQKDGTPFPYGYPMKQTRKKLKKIHMPKNNYSDVLKANKQRKFSEEDHEQAKERLEESKNKDSKFEKMIELIVEQNKNVMNVLTMMMTTLTTLVNNLNQKNAGNNNPMPSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT65</accession>
    <name>A0ABV2AT65_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004394</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003920">
        <property type="protein sequence ID" value="MES1922865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.80.10">
        <property type="entry name" value="Inorganic pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036649">
        <property type="entry name" value="Pyrophosphatase_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="103" mass="11825" checksum="D811C4590548C38D" modified="2025-10-08" version="1" fragment="single">FECISVMFGGKEGYANWRATLIGGNYDEFDFAAPEQVLSPWHDLGIEIAPDEFSDDFNQKFRHIRMVVTTPKGKSYYNRITKNERMNPIRHSISKSGVAMFSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AT80</accession>
    <name>A0ABV2AT80_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003321">
        <property type="protein sequence ID" value="MES1922646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="283" mass="33880" checksum="F36EBC19294F95A4" modified="2025-10-08" version="1" fragment="single">YKFFNGEAYFLQNENDILRKDIHLIYKYFQKFNLDPALDEIESVCAVKEFLIFSAQNPQKVIEIAEKGDFSFIPETEYYRYLTDPDLRTSSPHYSDETKSLTEIGLLKMLQHLGNRTCADFLKVNKKKMDLAYFYSTKPAEFEEFELLENLTKLPFFEGKNKFSEMFLSGDLQEDKFFRVSIIYENQKLSNHNWIRSNKNPPPFTDKNFKTAISLEQIPDSKETFKWRWATEWLSIDKEWAYSTKFSSKKFKIVQQNFLHKARTRKLIRYRVADTIDFYDEKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATF5</accession>
    <name>A0ABV2ATF5_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004412</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003958">
        <property type="protein sequence ID" value="MES1922884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18645" checksum="FEBE962C4FF9BFED" modified="2025-10-08" version="1" fragment="single">LEMIEKIDIKNFKNENSEINELDFFVETDRYSIFSHCDSYFSPVSLEKGEIQIEEGTLIDALMALDDFKESDNELLRQIFRRNLKKMRPKSDGTPIWLTESDNSWILDGKSIRNSGFWMRSSCSKGKTAAGKQSAGLKILPQANYENSSFDKNFSGDLFLSSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATU6</accession>
    <name>A0ABV2ATU6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF676 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004626">
        <property type="protein sequence ID" value="MES1923091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007751">
        <property type="entry name" value="DUF676_lipase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044294">
        <property type="entry name" value="Lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12482:SF5">
        <property type="entry name" value="DUF676 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12482">
        <property type="entry name" value="LIPASE ROG1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05057">
        <property type="entry name" value="DUF676"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF676" evidence="1">
        <location>
            <begin position="2"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="189" mass="21877" checksum="6BEC6B46970D74E1" modified="2025-10-08" version="1" fragment="single">CFSLGGVIARSALIDMLLRPFLPKMHTFMSLSVCHLGYLCNTNTLFKYIFWAVRKGTKSTCLKQLSLEDHSDKRKAFLYKLSLNKTLSNFKNVLIFSSKEDLYVPQHSARIETINNVSNNNIIHNEMTANLLNPLSKVLIVKINVKFDKEQSMLDKMTGRDSHISFISNENFIRDLFFSYGKYFWNDCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW4</accession>
    <name>A0ABV2ATW4_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">L-asparaginase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004647</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004696">
        <property type="protein sequence ID" value="MES1923106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1170">
        <property type="entry name" value="L-asparaginase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036152">
        <property type="entry name" value="Asp/glu_Ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006034">
        <property type="entry name" value="Asparaginase/glutaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027474">
        <property type="entry name" value="L-asparaginase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037152">
        <property type="entry name" value="L-asparaginase_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11707:SF28">
        <property type="entry name" value="60 KDA LYSOPHOSPHOLIPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11707">
        <property type="entry name" value="L-ASPARAGINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00710">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001220">
        <property type="entry name" value="L-ASNase_gatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500176">
        <property type="entry name" value="L_ASNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00870">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53774">
        <property type="entry name" value="Glutaminase/Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51732">
        <property type="entry name" value="ASN_GLN_ASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="L-asparaginase N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="163" mass="18149" checksum="843A0F10AEFB2A49" modified="2025-10-08" version="1">MAYTATALSFMLENLAKPVVFTGAAIPLGRYYAKSLELFNDAERNLVASLYVAAQADIPEVVICFSNKLTRANRTTKFDNWAQNSFESPNYPFLGRIGTNLSLFRDNILNPPKYKLKTFTNLFTNIGVIWLIPGFEDSIIQSTAKDENKKAIVLICYGSGFSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATW7</accession>
    <name>A0ABV2ATW7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004654</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004733">
        <property type="protein sequence ID" value="MES1923113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="100" mass="11042" checksum="2DD93EA6A5E1FDD2" modified="2025-10-08" version="1">MSKLDKKSLSISPVKYFPKRKSGTPLRSLNKRLRDSENIDSSPLSKTPSLADFGLGEYAKKDSFKDSDSVISTTRSVDSNVSSNKAILLESKTDSLEKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUE3</accession>
    <name>A0ABV2AUE3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUS-like FMN-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004829</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005424">
        <property type="protein sequence ID" value="MES1923280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02801">
        <property type="entry name" value="DUS_like_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035587">
        <property type="entry name" value="DUS-like_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052582">
        <property type="entry name" value="tRNA-DUS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018517">
        <property type="entry name" value="tRNA_hU_synthase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45936">
        <property type="entry name" value="TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45936:SF1">
        <property type="entry name" value="TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01207">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51395">
        <property type="entry name" value="FMN-linked oxidoreductases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01136">
        <property type="entry name" value="UPF0034"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0288">FMN</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="DUS-like FMN-binding" evidence="6">
        <location>
            <begin position="24"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="133" mass="14713" checksum="28BA94ECB6FC1E09" modified="2025-10-08" version="1">MRLVRKTDQTTNLVNFLSPDKNHSIFTTFIGEPVVFQLGTADAVNALKAVKVVQRDIKAVDINMGCPFKFSVAGGMGAALLRKPEVVRDIVQTLKRNIDVPVTCKVRVLENVDESLELVRRIEKSGADVHLIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUH5</accession>
    <name>A0ABV2AUH5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">MHBO_004865</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNA polymerase beta' chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010005583">
        <property type="protein sequence ID" value="MES1923310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.2940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045867">
        <property type="entry name" value="DNA-dir_RpoC_beta_prime"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007083">
        <property type="entry name" value="RNA_pol_Rpb1_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007081">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038120">
        <property type="entry name" value="Rpb1_funnel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376:SF11">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05000">
        <property type="entry name" value="RNA_pol_Rpb1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04998">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64484">
        <property type="entry name" value="beta and beta-prime subunits of DNA dependent RNA-polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="8">
        <location>
            <begin position="40"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="RNA polymerase Rpb1" evidence="7">
        <location>
            <begin position="142"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF05000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="MES1923310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="200" mass="22255" checksum="E324D14F5B6262AF" modified="2025-10-08" version="1" fragment="single">RKNSEKFKSQIASDFCGLKGKNFSRSEMTRILKKKLSKPTGEDQLDRKMKSLLNPISSRVVDKIFPHGMLKRFPNNNFALMVLSGGKGSSVNISQISALLGQQELEGRRVPRMRTGKTLPAFGAFGLGAEEGGYIADRFLTGINPKVYFFHCMAGREGLVDTAVKTARSGYLQRCVVKNMENVQGRYDQTVRGQNDCVLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI3</accession>
    <name>A0ABV2AUI3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004671</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004801">
        <property type="protein sequence ID" value="MES1923129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="73" mass="8419" checksum="5E983EDF52764C97" modified="2025-10-08" version="1">MMASLYSKEDPYFLVYFSVDKSIHLLPKKRISFEDESELSVKVLFETSNLQDDGTEVIEDLPYDGKIFFSGSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUI7</accession>
    <name>A0ABV2AUI7_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amino acid transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">MHBO_004884</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005634">
        <property type="protein sequence ID" value="MES1923327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="entry name" value="Sodium:dicarboxylate symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050746">
        <property type="entry name" value="DAACS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958:SF63">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11958">
        <property type="entry name" value="SODIUM/DICARBOXYLATE SYMPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="Proton glutamate symport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1923327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="162" mass="18487" checksum="4AE6BF186196A8DD" modified="2025-10-08" version="1" fragment="single">SICYYLLTSFFAATMGLIFANIIKPGSREVLCALETSARIERKFEEKSFIDSIISLFKMTIPSNVLKAILESNILAIIFFFLIFGFLLTKYSSSDNLVIFKNTVDVWHDAIIDFVHFIIFLTPVGVFSLIAGQMSRLSDNCILMKLLIYMLVFLGCFYLKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUR8</accession>
    <name>A0ABV2AUR8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004763</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005147">
        <property type="protein sequence ID" value="MES1923219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="81" mass="9335" checksum="1D87B48A52DA3785" modified="2025-10-08" version="1" fragment="single">DLHDTRNKRPYSIEIQTFVFKDAPLQPEIKRGIVKQITKHLDDLISCFGAKNDKIYDIGYRCSIVPFSDSESHIVPENAEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUS9</accession>
    <name>A0ABV2AUS9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004989</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006132">
        <property type="protein sequence ID" value="MES1923421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="65" mass="7640" checksum="6A43DF1A64FE9CD2" modified="2025-10-08" version="1">MNNMFLSMLACYKQPNNWYETTIETPVIPMHLSVSDPCFRIDYAQNMLSSMESVGEHKHHMQMVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV07</accession>
    <name>A0ABV2AV07_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004822</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005404">
        <property type="protein sequence ID" value="MES1923276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="136" mass="15281" checksum="4CC1657DBC00AF40" modified="2025-10-08" version="1" fragment="single">KTSKADKEYLQKIANEQAQKIKKETGKKVYVDSEFPPVYSNIVPDEKSDFSKPIDFKLLKDIFANGENVDIFSGPIDPTDIVAGKELMFVASAVALMAELPDLIDRIFITKNINKKNMFKREMEAEICRSISSSGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV37</accession>
    <name>A0ABV2AV37_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-dependent RNA helicase dbp2</fullName>
            <ecNumber evidence="2">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">DBP2</name>
        <name evidence="2" type="ORF">MHBO_005105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="2"/>
    <dbReference type="EMBL" id="JBDODL010006619">
        <property type="protein sequence ID" value="MES1923521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="34"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="156" mass="17382" checksum="19F40F1CD308C716" modified="2025-10-08" version="1" fragment="single">SATWPQEVESLASDFVNAPLKVRIGSLETSAVHSVTQNVLVVDRRDKFNILMEDIVPGELSKGGQVLVFVSTRRVSMFLFGQVEEAGGKAVLIHGGKTQLEREEALDDFSKGRCPVMIATDVLQRGLDIPRVTCVVNYDFPQQIEVLTIFLFWLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVA1</accession>
    <name>A0ABV2AVA1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005199</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007101">
        <property type="protein sequence ID" value="MES1923598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="7236" checksum="6AC0301F5E9F6870" modified="2025-10-08" version="1">MCSTFYVNRINMVHLSGYFRVKVKLGYDKVNMTDIKDQVTSRRKLPLLTYHIRCSHSILIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVC1</accession>
    <name>A0ABV2AVC1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005209</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007166">
        <property type="protein sequence ID" value="MES1923605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="80" mass="9468" checksum="1EC007E0EA77A37A" modified="2025-10-08" version="1" fragment="single">KGRREEEIEKGGRMKRSGDRKEREEKRKGGEREEEIENGGRKEGSGDRKEREGRENEIEKGGKRKRRGDIKQRQEGEKMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVD8</accession>
    <name>A0ABV2AVD8_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005258</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007381">
        <property type="protein sequence ID" value="MES1923641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="61" mass="6937" checksum="952A79F3C44FBE46" modified="2025-10-08" version="1" fragment="single">MRSRFDMKNDTQWFDTIAEARAEALELGMPLDSVVQELTIGDKGNLIQTVKNFINGDYTID</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVF9</accession>
    <name>A0ABV2AVF9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005262</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007410">
        <property type="protein sequence ID" value="MES1923645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="12592" checksum="529F6847EDC78190" modified="2025-10-08" version="1" fragment="single">MYGTIGELMEQTQMKRVLKEVETPIMGADGRPITVMQDVLEEQVAFPVDLRGISDLVDEHMDDTLFRADDTLVELMGLPSQTNYKKASNTLIELKARARKLEKSMDEHAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVG3</accession>
    <name>A0ABV2AVG3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005271</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007469">
        <property type="protein sequence ID" value="MES1923653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="7842" checksum="E9902410B7B3AB2E" modified="2025-10-08" version="1" fragment="single">PSDAISWKKFLFSPINSESSIRPLQKKKSRFVVELNCPGVFPRPYFLSLRLLKSVPSMSLESERCIKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AE78</accession>
    <name>A0ABV2AE78_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000057</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000007">
        <property type="protein sequence ID" value="MES1918028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="129" mass="15078" checksum="4F33598341D97D83" modified="2025-10-08" version="1">MSKIEIIKLNAFLRTNPICSLKGNKSSAHFKRVKAETEENLKRVNLLKLYDFNDEELALFCYKGYKTPLKRKDGVLLENFLETGRIDDDFYKLNLQKLDSFFKFDEKITEEKDDPVDSDEGEVFIAITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AF84</accession>
    <name>A0ABV2AF84_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RNase P/RNase MRP complex subunit</fullName>
            <ecNumber evidence="1">3.1.26.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">POP4</name>
        <name evidence="1" type="ORF">MHBO_000289</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.5" evidence="1"/>
    <dbReference type="EMBL" id="JBDODL010000039">
        <property type="protein sequence ID" value="MES1918302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="183" mass="21901" checksum="4CF95F1F57DCF908" modified="2025-10-08" version="1">MPNMDDFNDKIDIYSTLIKNSTKPKTRLADLLNKIMPISDFNQEISDNYKIFPVAIKGIEQYDKKIKFKTINLEKREASDLKITKINSIPKNKIKKRMGSKDRRRNNKVFLKNKYLTKNFLSLHRLWKEYIDQLLSNCKTDEERHSKIARADFHGAMIKGLWQKYIRFVKYQFLQFIKSMNKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFE9</accession>
    <name>A0ABV2AFE9_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">MHBO_000358</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000052">
        <property type="protein sequence ID" value="MES1918387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24351">
        <property type="entry name" value="RIBOSOMAL PROTEIN S6 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="83"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="446"/>
            <end position="695"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="14"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="MES1918387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="723" mass="82370" checksum="F10EF6992FB85E29" modified="2025-10-08" version="1">MSYVSSTSCSSIESDSESDSESDEEPLKSNTGDYFCVKSWYYPNKKHIVEPEIQQQDLTFREEQINSKCIRENCGCCAKIEDFDICNLCSESSHGIVFRVVEKSTGNIFALKALEKTHKKFQNLKNEIEVAERLNGLSSVVDLYHVFETKEFVYLMMEWLVCDLYRINEQITIETYQIEYFLVGIINALIEIHKKNVILVDMKLSNVMLNSDGDIKMVDFGLCAIDDDKNLNKKFRGTNAYIAPENARGEFLAVGDSFSLGIMILKMAGIPLNVIGGYDHLDLSNIKIWKKNEEDIQNLIDISKLKDVEHLNSFVNKLLMAKPESRIKAEDMIEDEFVQNAYNKNHKAEFKSKLRGIIGDKMHGSVNENFDEEAKFEGDMFPWREQQNIDQDEKDELIDQFKNEWISAVNGSNVNDNLGEHGYPTVFKDAMNTSCRCNCKYRMEQYELNEAIRTSSSYVVFSASRSGEKFAVKAYFKTPQNVRKVLNESNILLRLKNDAIATLFCAFETSRCLFVVAELCSMTISEMRFGGALYEIPSIKIESIALMITMALRYLEGGEVIHTNLGSHNVMFTEAGYLKLTGFGRSIDLVGNTSHVRERASIFFSPPELLKGYATAKSPQWNLGLVLAGMVCQKKCPKNESSDRFVSYIKSAAFANHLSMINLDSRFGDYIQGLLSADTFERMGYFNTENYAEYLETVKERIENTTSPLDQIEEKGRGYLLNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AFV2</accession>
    <name>A0ABV2AFV2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000487</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000077">
        <property type="protein sequence ID" value="MES1918527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="530" mass="59103" checksum="4DA1D65DBBEC9BFB" modified="2025-10-08" version="1">MSCEKYGVEFPKTGKNRRSTINFHLRLLAELLGSSNALDDFVLENQSSYRHKYSPFFVKLMEKSLESSQKALEIAEKGIHFVESNLVFIRKNGESVPLKQEFATNNENFFATKTCFGDKAHARSTNHFDGFFVEYNGKKLSRKSLFEQIDNWAHSGVMERDAEKALISLIFSNGKDFSTGEFESLEGHVFVMIGAGSAMGPFNTLIALGATVVAIDIPRPNLWDKLKSKAASSKGTLIYPSHVDRNSGAEIAGCDILRRPAQVLNWLSTLDLKGKKVTVGNYTYLDGSLHVLLSAVADQIVDGFCRRFDGVVNVAFLGTPTDVSVIPEEAFYAARENYSNLRFGRLAEMLIHLFTLKKQLRRNDIVEVGKRHLYNGLIVEQGPNYALAKMIQLWRAVIHSQKSKRGRVSLNVAPATATKSVISNANFRLAFKGRPYFKPLETFDERTSSSLMAGLLLHDILKIGTGQKQTENAILIKSQQSVHGGAWRCAYSVFVAKFIVNTNIVKHPSIISVLSSIIYASLRRNIFLDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGR3</accession>
    <name>A0ABV2AGR3_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_000529</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000088">
        <property type="protein sequence ID" value="MES1918578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1918578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="291" mass="34623" checksum="0054C9448DCB7DAA" modified="2025-10-08" version="1">MESKILKNVVQKTKQFESKIGAKNFSDLQKEIKTLFRPETQVAVVGWFELYIEKQLENRFKEFMFKIDHYYSTQYLDYLLNKSKKAILLLNTINQSAEKLYSEFETIFRTYKKVLKQENLYNKNKLFEKIKILHQNYKSQNLIKCLTAVFSATFDIFEENCEDSVLTSQKTKNEFLIKGFAKTTEKLAKLNFNYVLSKSAECFVKETISRKSKIFTEKQKFYLFEDLRILCEDKIFVFLEQISSKELGTVVRKDLILKMGYKEGLKLFFKNLPDIIKAPENTFFIKFKNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AGY6</accession>
    <name>A0ABV2AGY6_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribosomal protein S15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">MHBO_000817</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS15 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000157">
        <property type="protein sequence ID" value="MES1918931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00353">
        <property type="entry name" value="Ribosomal_S15p_S13e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.10">
        <property type="entry name" value="S15/NS1, RNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000589">
        <property type="entry name" value="Ribosomal_uS15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005290">
        <property type="entry name" value="Ribosomal_uS15_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009068">
        <property type="entry name" value="uS15_NS1_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23321">
        <property type="entry name" value="RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23321:SF26">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US15M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00312">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01387">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47060">
        <property type="entry name" value="S15/NS1 RNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="MES1918931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="204" mass="24106" checksum="FF1FB5C56116C686" modified="2025-10-08" version="1">MFNKIPKVRKNYFRTNIKTDFCTAKNSQISSQLLFGKLPLEKRRYYGILPDSNRLNISSKYLQKVFSGEKEYLKFLEKSLSFDNASQKELNSWYYSKIAEKFGKNKDDFASLNVQIIILTHKINQLRKHIATNKKDSKAKYNVIRHHGRRQKLMRHLREKNFGQYKQVLVFCGLEDVWNPAKTSKHHRAHIPSAKYVPPLNPIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AH63</accession>
    <name>A0ABV2AH63_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Motor activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">Myo22_1</name>
        <name evidence="10" type="ORF">MHBO_000827</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000161">
        <property type="protein sequence ID" value="MES1918942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00124">
        <property type="entry name" value="MYSc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00159">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.720">
        <property type="entry name" value="Myosin VI head, motor domain, U50 subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025662">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140:SF706">
        <property type="entry name" value="DILUTE CLASS UNCONVENTIONAL MYOSIN, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140">
        <property type="entry name" value="MYOSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00193">
        <property type="entry name" value="MYOSINHEAVY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00242">
        <property type="entry name" value="MYSc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00324">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00675">
        <property type="entry name" value="SIGMA54_INTERACT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0505">Motor protein</keyword>
    <keyword evidence="3 6" id="KW-0518">Myosin</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="8">
        <location>
            <begin position="181"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="domain" description="Myosin motor" evidence="9">
        <location>
            <begin position="390"/>
            <end position="1105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="759"/>
            <end position="789"/>
        </location>
    </feature>
    <feature type="region of interest" description="Actin-binding" evidence="6">
        <location>
            <begin position="979"/>
            <end position="1001"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1171"/>
            <end position="1192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="771"/>
            <end position="780"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1179"/>
            <end position="1192"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="476"/>
            <end position="483"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1918942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="1248" mass="145015" checksum="7DBC56548423807A" modified="2025-10-08" version="1">MDNKTFAKDLEFSNENSTAFENTKRILTLIQKQFVKLNGDEVKKAFLERMDTRQMEFYYTKIQRDGETFENVIDPVFLANMAKFVLMKQDQKCFDFFSPEFFLLPEEDISKTFESSTTSNKDILSKLMSMCCKVLKNFPNRNVKKMAGKISKSLVKCLKTFKNKIDFILNANKVALFIQNLILEFFRSEQIDVDQFEKLKHLFFELKCECEVGIFRTSPNSFQLKDLVHFYEQMGVQNTGNLTCKLVASCIKFWLGNLSFSSEIEKMQKIFPQYSIPFDIDTKDKTEIRKLYESVTGRKRIVLKSFLDLTNRVSQNSKINKMGIKNLSTIFTPLLVEFPFSVLEKQTLFYYLNVVQSLMSDYSQNISEYARIDQKQKSKIVFGKKNKANKKSEDLMEIDKLNKIAVLEDLRDEFKRRQTYMEFASVLISVNPFKFYDNETDAKNYSTEKRAHINKLALNVYEKLSKGQNQSIIFSGESGSGKTFMADCCLKYFLSKSKDSNSLGKQIEKNIPIFESFGNAKTSLNASSSRFGKFTKIFLDSDEEMSSAEIEVYLLETNRLTLRDNPQEERNFNLFYEFLASSRLSNLKEKLFGAKNPYNFNYLKDLKNSFIEDDALNFDILLNSMESIGFTQSEIENVFKLVSCILLLGNLNFSKSKEEMAKIQNLAKFLKIDPKNLQTCLSEKTIVVAKRESFCSPLASKEAKENRDFINQFLYKTLFGWIVAKTNSFLHIKNQTNCNPRTSRDFIKDDINSINSCNRNMMNENDEKSTLNENSGTRNKSLSREPKLKSSKEELQVNFLDFFGFENLSRNSFEQLCANFVSEKLHLIFKKDMLHNEEQFQCEESILEEAKINLNDANSRAIEALDGPRGFFNSFEESISLGVTSDNSLQIKIEENFKKLPFFRLKKSRMNSIVIEHFTEPVEYNFEGMIVKNKNKISANFETIVAESEWAFLKEVVSDQILRSNRRNSSVSKKFRYRIERLIKMLQKTKISYVKCIKSNKKSHPEKFEDGYVLKQLGNTGIFDHLENRRKGYCHHYEIKDFVKKFGFLVKEEKSDKDAVELLVSKIGFDALIGRNRLFCKKEGMEKLKKFEKNCEKEAVDTLQTFIRVTIHKHNTKLALQTRFEKGGIRAELNIVRVESAQPELIKTNTKRNSVKKTFRSSVLEGLGRFFSPRKGRNKSKDAQRTSREDLNDKIKAKRLQFTSPIHKETKVKGFEKLDESSLITKKQPVSHVAMMKMKYEKLIAGNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AJF3</accession>
    <name>A0ABV2AJF3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_001581</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000409">
        <property type="protein sequence ID" value="MES1919816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.440">
        <property type="entry name" value="FF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002713">
        <property type="entry name" value="FF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036517">
        <property type="entry name" value="FF_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01846">
        <property type="entry name" value="FF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00441">
        <property type="entry name" value="FF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81698">
        <property type="entry name" value="FF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51676">
        <property type="entry name" value="FF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01159">
        <property type="entry name" value="WW_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WW" evidence="1">
        <location>
            <begin position="11"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="FF" evidence="2">
        <location>
            <begin position="88"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1919816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="211" mass="25370" checksum="B8E73E977418B315" modified="2025-10-08" version="1">MEFSPKNYGEWTQYQENDTNYFYNNVTAASQWAIPNDIKNKIPLENPSPFIEFETKNERRFVNTINGRIHPDISKFKSSKRRTNVKLKEFDIREQCFQQLLDENGIDESSNWNDVKIRLCSDPRFYLISSRSKRLAVFEKWQQFLITEKENLIKANFLKCLKSVLSKNKDWRKFGLGKIKKLLMNENNFKSMENEKKMEIIILEYLTKFYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALF1</accession>
    <name>A0ABV2ALF1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GST N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_002150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000694">
        <property type="protein sequence ID" value="MES1920485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1920485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="208" mass="23980" checksum="9FDC240268CEEA12" modified="2025-10-08" version="1" fragment="single">NVKLFDDTDRSSNNYSRSKVPALEDNGFLLFEIGAIIRYLNNKFLGSILIPSDPKEQSIVDQAFEHLISTLRKSVAKLIYCKIFRPFFCKKCELEKEDCFIRAESDGYLNEIEIYLRYIEQFYFRDKNGAPICKFSSISANKKKTEKCFYAKNKATFFNVGNLSVTQDFFQFTPISPPCLNNCHESTLEKLANVLGYNDSLDSVEVNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ALJ1</accession>
    <name>A0ABV2ALJ1_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_002214</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000732">
        <property type="protein sequence ID" value="MES1920553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.60.10">
        <property type="entry name" value="Zinc finger, CCHC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00098">
        <property type="entry name" value="zf-CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00343">
        <property type="entry name" value="ZnF_C2HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="Retrovirus zinc finger-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="230" mass="26374" checksum="C9C172853A2791E3" modified="2025-10-08" version="1" fragment="single">KSPIRCFNCQRYGHFSKLCPNNARCCKCGKDHNTIDCKETIVKCIHCDKNHKANDKICKKYIEEKAKFIKKNIKRDSPFSNNRFYGLEVHNPIEPEDSEVNSFVFGYPKQKVKSKRNNNKKHKLNNNNESFLNVENRIKTTKNSNNITKNNNIKPKKITKKNVISKNDNKSSEISELVSCIKNLTLVFSKGMLELQNSLNVIMASLNSLSDGENPSLTSNKLLNNAMRSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM11</accession>
    <name>A0ABV2AM11_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GTP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">SEC4</name>
        <name evidence="3" type="ORF">MHBO_002339</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000810">
        <property type="protein sequence ID" value="MES1920695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050227">
        <property type="entry name" value="Rab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47977">
        <property type="entry name" value="RAS-RELATED PROTEIN RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00176">
        <property type="entry name" value="RAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51420">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1920695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="203" mass="22840" checksum="5569CAD0FFEC28B7" modified="2025-10-08" version="1">MANQNELLYKLLLIGDSGVGKSSLLLRFTDGSFEKSFISTIGVDFKIKKTKVDDKNVKLQIWDTAGQERFKTITSSYYRGAHGIIIVYDVTQRESFENVKSWMSEIDVHGSNEVEIVIVGNKVDQGDAREVSTEEGEQLANSLNVIFIEASAMTDEKVNEMFMMITRKLLKSNVLEKIDQSIGRNEDMDIDFDNAEVTNSSCC</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AM30</accession>
    <name>A0ABV2AM30_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">MHBO_002375</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010000832">
        <property type="protein sequence ID" value="MES1920734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12254">
        <property type="entry name" value="RRM_hnRNPH_ESRPs_RBM12_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050666">
        <property type="entry name" value="ESRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13976">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="108"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="295"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="302"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="318"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="MES1920734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="430" mass="49204" checksum="AB81B7B5E329744D" modified="2025-10-08" version="1">MADTTIKFSIKYKKSPKSAEAQKPLWKSKISALAKISFSQLKIYPENALEFQIKDQKFNVWHRIENYKAIPDQGAVIKIVILEDFVPLKFFLNNFRELSPKGPFDSNKTVRLRGLPWECDEDDIFEFFEGLKISRGGVHINYTDPSSNRHSGDGYVEFEEKESVEKALEKAHQCILERYIEIFPSSEEEIFTFRKRQFELARFSSESVPVDEKSVVLKMIGLPWEASYSDILDFLVDTPLTAIHFPKNRQGRSSGTAYVEVLNGEFASRVLGHQKEYIGDRFIEIKMSNMRNLRSDMDVPENSPNPQKTKNSRATSKAIKEMSESPSDKTLPEPTAKAALRKTYCVLIRNLQSETTNYAIDNFFASNGIPPYRIHKRVNGMEAYCEFSTSDDCEMALDLTGRLLEGCEVVISRVSFDEVAEHVGLTHLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANW0</accession>
    <name>A0ABV2ANW0_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Mitochondrial import inner membrane translocase subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002724</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001111">
        <property type="protein sequence ID" value="MES1921149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="69" mass="8131" checksum="A78448AAD6E0B49C" modified="2025-10-08" version="1">MNKSLNLKLITVDERCRTVMDEFETCWNICMYPKPVELDSTLSYEQRECFRNCSSNLNETLKVIAGSYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ANZ0</accession>
    <name>A0ABV2ANZ0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002927</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001310">
        <property type="protein sequence ID" value="MES1921396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="68" mass="8165" checksum="393653E822F08C23" modified="2025-10-08" version="1">MNVRLSFQKKCHSSLNRCPCVFHIKIPSMYVWIVTKEKHLEYSNYLRILALCIKAISQFLMEEQVKYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AP23</accession>
    <name>A0ABV2AP23_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_002940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001324">
        <property type="protein sequence ID" value="MES1921410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1921410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="85" mass="10182" checksum="F40B263668ED0DFB" modified="2025-10-08" version="1" fragment="single">MILKNTTPYNKAQQIMYEKLLSSYNPLRAECLVSAWINYHHFRCKYNPEVEKIIEQFPHPKTLQKNEDESFPENFVFEAFPKSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APT1</accession>
    <name>A0ABV2APT1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Prolyl 3-hydroxylase ogfod1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">OGFOD1</name>
        <name evidence="10" type="ORF">MHBO_002943</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">20-A016</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>[ribosomal protein uS12]-L-proline + 2-oxoglutarate + O2 = [ribosomal protein uS12]-(3S)-3-hydroxy-L-proline + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:54156"/>
            <dbReference type="Rhea" id="RHEA-COMP:13816"/>
            <dbReference type="Rhea" id="RHEA-COMP:13818"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:50342"/>
            <dbReference type="ChEBI" id="CHEBI:85428"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>L-ascorbate</name>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TPA1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001328">
        <property type="protein sequence ID" value="MES1921413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.620">
        <property type="entry name" value="q2cbj1_9rhob like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019601">
        <property type="entry name" value="Oxoglutarate/Fe-dep_Oase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006620">
        <property type="entry name" value="Pro_4_hyd_alph"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039558">
        <property type="entry name" value="TPA1/OFD1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051842">
        <property type="entry name" value="uS12_prolyl_hydroxylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12117">
        <property type="entry name" value="HISTONE ACETYLTRANSFERASE COMPLEX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12117:SF0">
        <property type="entry name" value="PROLYL 3-HYDROXYLASE OGFOD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13661">
        <property type="entry name" value="2OG-FeII_Oxy_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10637">
        <property type="entry name" value="Ofd1_CTDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00702">
        <property type="entry name" value="P4Hc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="9">
        <location>
            <begin position="59"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="MES1921413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="355" mass="41772" checksum="EB83AB052994A26A" modified="2025-10-08" version="1" fragment="single">MREKRKLIFSEKTSDLFTFKQSIDLHHVDTPIIKNLVETLESKSFIGMISKFTGFGLSGKVDFFASIYTKGDYLLCHDDCLSTRKIAFIYYLTSLDWTISDGGYLQLFENSLEPPDQNFKNIKPTFNSLAFFEVSRKSFHRVQEVSGDRIRLSITGWYHSSEKQDIPKPIFDSKNYFSKTIKFEENDFFKLCLNPFYFDQNAKLQIRSQFLENGNIELKNFLREEAVLEFLEYDFKSRDWLYRGPFTYRNFYTKKPKQTKKSKILKLFGSKEFVNFLDFVTKDDITECNAVINKFSKGSYNLLNDFSNGFQKRTETIFNIFSKSSQKKISKLDKNTGGTIHYFKESEEQFSIDPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2APZ2</accession>
    <name>A0ABV2APZ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003281</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001717">
        <property type="protein sequence ID" value="MES1921752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1921752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="146" mass="16615" checksum="9BAD33FD99A47248" modified="2025-10-08" version="1" fragment="single">MISKRILMSNKQLFHITKRFKALKNPINLKSSCFDKFRPRFADKYKISNLALITMGFSVATFCVLGILSVVAKSQVASLPKAVAEDVINSSKDKTDKKKMYEKSVDLLEESAEMGELKYSYLVVNGKIIKNEIIKKQNFKTEKNNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQ69</accession>
    <name>A0ABV2AQ69_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003141</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001550">
        <property type="protein sequence ID" value="MES1921614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45815">
        <property type="entry name" value="PROTEIN DISULFIDE-ISOMERASE A6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45815:SF3">
        <property type="entry name" value="PROTEIN DISULFIDE-ISOMERASE A6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00421">
        <property type="entry name" value="THIOREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045767726" description="Thioredoxin domain-containing protein" evidence="1">
        <location>
            <begin position="19"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="10"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="294" mass="33783" checksum="4E772C85A8E8BE82" modified="2025-10-08" version="1" fragment="single">MTWSTMLFLFFAINRVMSFYDSDSGVKILTEKNFVKFVKRQSITLVEFYAPWCGHCKNLKPEYIKAAKELKDIIPLAAVDADEQSNKALAAKYEIKGFPTLKLFKNGKVADFGARTADEIVEQLKKELSDEYLTVLTDKNVDEFMGLKRRKVIVFTNDGKPDQIVKSVSMRFHRQIAFGFATKAENSITKQFKVKSFPKVILLENKKNPKPEDLGEYSAKNLKKQIVTALGPENNEFEQFDIVHDNSCFRKYCVVDGNLCVLYVESGSKDEISRRRTILQEARDDLVDESFFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AQB9</accession>
    <name>A0ABV2AQB9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_003404</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010001876">
        <property type="protein sequence ID" value="MES1921870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5045256605" evidence="2">
        <location>
            <begin position="21"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="143"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="183"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="147"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="198"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1921870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="256" mass="29667" checksum="03412E7CD8F2E520" modified="2025-10-08" version="1" fragment="single">MNTIHYFAFLLFFRLFSTESIFDDLIDKDSGMVQDKKLYSDGDVYIDRKYGRKLTENLTKKIHFKNKTDFSLVLGKVKNFGEVDFDELAKYHPVETKELQKEIKNLEKLMKSNQIDESHPEYKKTLKTLENLRAKSFYSKMKEFTKSNKNMPTRSSNAPGIDIPDFDKNGDIFASKTGHENIVTKVSENEASPNKKGASRDDDKEKENKKNGKSKVKSDKNRKDVKSKVKSDKNRKDVKSKVKSDKNRKDVKSKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR52</accession>
    <name>A0ABV2AR52_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ATP synthase F0 subunit 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003673</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002304">
        <property type="protein sequence ID" value="MES1922157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="50" mass="6184" checksum="1ADADA8132A80079" modified="2025-10-08" version="1">MNESTCVKPLTMLMILVDISIIILYYMHGWRCTERKLRNRKLRMRQNREK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AR96</accession>
    <name>A0ABV2AR96_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PRP40 pre-mRNA processing factor 40</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">PRPF40A</name>
        <name evidence="3" type="ORF">MHBO_003684</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002322">
        <property type="protein sequence ID" value="MES1922167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.440">
        <property type="entry name" value="FF domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002713">
        <property type="entry name" value="FF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036517">
        <property type="entry name" value="FF_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039726">
        <property type="entry name" value="Prp40-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11864">
        <property type="entry name" value="PRE-MRNA-PROCESSING PROTEIN PRP40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11864:SF0">
        <property type="entry name" value="PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01846">
        <property type="entry name" value="FF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00441">
        <property type="entry name" value="FF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81698">
        <property type="entry name" value="FF domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51676">
        <property type="entry name" value="FF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FF" evidence="2">
        <location>
            <begin position="65"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="26"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1922167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="341" mass="40706" checksum="8B81E2296A291C67" modified="2025-10-08" version="1" fragment="single">VPKSVVENATSHSQKTKNELQKNEILPNQKTNENLENISEEKTNEKSTKNEKTNVKSENQNIENKMKTSKNEIKCFEKLLEEMDIKVTAEWEDVLPALQNDDRFNIVKNKEERIEIFNNWKKRLFKNQIIKEKNEKREKMEKEKSITTKNFLSKKFDAIDDQNLRNKILKEYTKKMVKNELKAKKRKKIDQMDQLETFFRAKRDFKIDTPWQIALKTAKKQTFCNELNEKDIFKVISELKEDLSLREKAIDGDEQPSDDEGARFRNDFRKLLDEIARADMINTKTKFEEIKDLVTRDDRFVALKEQDFAAEDIFEDYCRNLRVLIRRDKRVFESLMKVFNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARB0</accession>
    <name>A0ABV2ARB0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_003698</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002356">
        <property type="protein sequence ID" value="MES1922182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="292" mass="34377" checksum="46C06DBEFB67E61A" modified="2025-10-08" version="1" fragment="single">MVFDNDKKKHKNKIKLSTFIKRELAIKWRSGELKLQEQDLWLRHQTSAFLRPSINFFACSAVFFLMKRGGLFAKSTKMNKFFGLTASLIFSWKLWDNRIDFIGEEMAKDFFFLPNSQLSRDFRKQARLNYPRNLWISEFDQIHGKSYDSNDNNFADYGDDQISRKNFFVVLAESVDSYDKKAKIVNKVSDNKLKNLINNDFDDLGENMLKIDEIDENLKIDKNLKISRACEKELIKLKECRYKNVPGKCGHFKKALELCQIRYRFQISGYTAIGDRGLMREGEFRDVDFKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ARY7</accession>
    <name>A0ABV2ARY7_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_003949</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010002803">
        <property type="protein sequence ID" value="MES1922435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="122" mass="14129" checksum="E185AB8B1D0B8942" modified="2025-10-08" version="1">MKMKNKMKAASSTLKWILLFSLNIAGSTNLDDYLATCAIYMAITETLLYLWKLYAKFSSVRHFVIIVFILLYFNPFCVFLYASMLTRSIRIGENYFVVAMSINIALKILEIVTNIVQLYMLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASF1</accession>
    <name>A0ABV2ASF1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Structural maintenance of chromosomes protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">SMC1_2</name>
        <name evidence="7" type="ORF">MHBO_004126</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">20-A016</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003208">
        <property type="protein sequence ID" value="MES1922608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937:SF12">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18937">
        <property type="entry name" value="STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0498">Mitosis</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RecF/RecN/SMC N-terminal" evidence="6">
        <location>
            <begin position="76"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="MES1922608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="207" mass="23004" checksum="7BBD16701940A197" modified="2025-10-08" version="1">MAAAFQAIEKKRSELFCTTVRKVDEHIGTIYKRLTESEQFPMGGNAYLTLENADYRPFEHGVFLCAMPPSKRFREIESLSGGERSVAAMALLFAAHAFRPAPFFVLDEVDAALDKANAARLVRFLQRETESKRLQCIVVSLRESFYHKAEELVGVYKDVRRASSGVLTLDLEEFDAQSGQTLGSAIRKRGRSVGVSVSSFGSDLAVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASQ5</accession>
    <name>A0ABV2ASQ5_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Single-stranded DNA-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004224</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003463">
        <property type="protein sequence ID" value="MES1922701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="170"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="176"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="218" mass="24532" checksum="392AEF7410524918" modified="2025-10-08" version="1">MGGGCIPEDSICMFHMEVRQPTKPEKKTQDVWVSQSDKGIMYLDCCFEAVGGQFEGRKIFEVIALPVGMQTSQLTDGHVKWCNGSGARLRAIVEAVRNIDPKDQSQNAMNGRAIAGWHEFNGMTFPIKVGYKRIESDDKYVNNRIKSIVTPNRKEYEQVVNGVDIITDKPIPEIKQSSSPQQQSGGYGQQQYQQPQQPRQPFDGSENNNGQFDDVPFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ASX0</accession>
    <name>A0ABV2ASX0_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003546">
        <property type="protein sequence ID" value="MES1922737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.1310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035969">
        <property type="entry name" value="Rab-GAP_TBC_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47923">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1922737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="187" mass="21962" checksum="86F25CEBA38FCCC5" modified="2025-10-08" version="1" fragment="single">MEISDKKTKDVVTLLQKNRMGIENSINDLKRIGRDYGFGSSNNGKRADAYKFILRISKSEFPSWQSSEVDSTKLSEQEELDVKRAFVLGDTFFYKDDKLDEAREQVKIMLSRVFHCENMYDITYTQGLLNVFCIFYILWENTEEAYYMSMKFIRDFYGIYLLDGTIDETNFSSNFLKGILKKLNLDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATL4</accession>
    <name>A0ABV2ATL4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_004355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010003832">
        <property type="protein sequence ID" value="MES1922829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="14"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1922829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="157" mass="19292" checksum="B37D582444140D74" modified="2025-10-08" version="1" fragment="single">AWLSKEWKTEQKMRDEYRNMYEKTKKELNDYKKRNEDLEAKCKENKELLDIIQKLKKDNQDLKKELCERNQEYDLLMTKRNQDIASQRMRGQVCYFGVHLYTYIYLYNCFPFRRYVKTACEHVYSFNYSSFGNVMIKKQSLMRIILTFGFQIVCFFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2ATZ9</accession>
    <name>A0ABV2ATZ9_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004669</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004781">
        <property type="protein sequence ID" value="MES1923127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="111" mass="13093" checksum="B1FC70FAD0E5EA13" modified="2025-10-08" version="1" fragment="single">MLLAVAENVFDIKRQFEYVEKTALNYFGESIFIFAQKSIFEFLRTDFEIESEKDWDESESAVNLILIEFTPFFDSLKRNLNEKGFLKIVKKIESLTALTIEKEIFSKKFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AU02</accession>
    <name>A0ABV2AU02_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Heat shock protein 12B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">HSPA12B</name>
        <name evidence="1" type="ORF">MHBO_004685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010004872">
        <property type="protein sequence ID" value="MES1923140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14187">
        <property type="entry name" value="ALPHA KINASE/ELONGATION FACTOR 2 KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14187:SF5">
        <property type="entry name" value="HEAT SHOCK 70 KDA PROTEIN 12A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0346">Stress response</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="18987" checksum="4067041DCD18B7D2" modified="2025-10-08" version="1">MSDILGKEVLDDFQMNCFIEYMAMKVEFDEKMCRLTKGDNFSISLPNGLRSCFKNRNPRENITERFQSRGNGESSCRNNGLCRISAQKFLSFYFPILDQIAKHVHYVINQHSVLGTKTIIIVGEFSECCVIHQQIRELLPYCKVIKPRHADLAVVHGAAMYAKYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUQ2</accession>
    <name>A0ABV2AUQ2_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_004952</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010005950">
        <property type="protein sequence ID" value="MES1923387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="138" mass="16165" checksum="7F56945B873A2053" modified="2025-10-08" version="1" fragment="single">KFKLMSQNKFEFSIITLNLKILKKRCIKTELETNPKYFISPKPVLKFLSAVKKKQFDFLVASLETKNQNFYWKKFQAASKKDLNQNSQWTALAVDILCETKTKNIAPFSNPPTKNLMLQTMSVNEKNNILISYFYILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AUX1</accession>
    <name>A0ABV2AUX1_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005018</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006236">
        <property type="protein sequence ID" value="MES1923446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="89" mass="9890" checksum="D35273878AACED2D" modified="2025-10-08" version="1">MMRKSNTSTDPCSAGAANILDTFVVVLKTFINVVESVGMLPSVVTAPVLKLQDHAMFKKILQDGKSHSKHTIFIPIYYNDNINIHPNDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV22</accession>
    <name>A0ABV2AV22_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005087</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006537">
        <property type="protein sequence ID" value="MES1923506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63829">
        <property type="entry name" value="Calcium-dependent phosphotriesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="165" mass="18569" checksum="F446D94199498290" modified="2025-10-08" version="1" fragment="single">MMDFVNYLDTNGNLNVDLKLAGNLYPLMPCSEIHVDQIRGLFATLSFQKDKREIFHLTGKPEVLATIPSHHSKLWRLLCVGNGKIWTSGDGTTVRQIDKHGNILLSIESDESPSSLSVDSQQCLVFSKWNDTTVNVYKDGNVQTHLNKTNWLPRGICFPRNGDIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AV98</accession>
    <name>A0ABV2AV98_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">MHBO_005200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007108">
        <property type="protein sequence ID" value="MES1923599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="69"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="MES1923599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="94" mass="10296" checksum="609CC8CA4D8FCE25" modified="2025-10-08" version="1">MNSAVESISKAAKELGYTIKMDMSGWSGKLGNEIEITLPDGTEKKINTMDHKDAMDQLMNTMSTIFNQPIGQPQTTDVVTGQTVNRGGKLYGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2026-01-28" version="2" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AVI3</accession>
    <name>A0ABV2AVI3_9EUKA</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">MHBO_004973</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010006039">
        <property type="protein sequence ID" value="MES1923407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001660">
        <property type="entry name" value="SAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47769">
        <property type="entry name" value="SAM/Pointed domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50105">
        <property type="entry name" value="SAM_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAM" evidence="2">
        <location>
            <begin position="100"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="MES1923407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="167" mass="19195" checksum="8EEAC47402571776" modified="2025-10-08" version="1">MSQNVDTKQNKIFDEKHKNLQKEIKNRKILKNNENVKPKSKDISISQQNPPQNRKSTPNIAKSQAKVRKRLPSKALSANKSTLSKSPKDLEFSLSEVQKWNPEKVSDWICSISPRFDEYRESLVKLRIHGDILLGCLTKNALAEVVDNPLLLSILWENIVNLRQILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2025-10-08" modified="2025-10-08" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ABV2AWM4</accession>
    <name>A0ABV2AWM4_9EUKA</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">MHBO_005223</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Bonamia ostreae</name>
        <dbReference type="NCBI Taxonomy" id="126728"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Sar</taxon>
            <taxon>Rhizaria</taxon>
            <taxon>Endomyxa</taxon>
            <taxon>Ascetosporea</taxon>
            <taxon>Haplosporida</taxon>
            <taxon>Bonamia</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2024" name="BMC Biol." volume="22" first="0" last="0">
            <title>Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria.</title>
            <authorList>
                <person name="Hiltunen Thoren M."/>
                <person name="Onut-Brannstrom I."/>
                <person name="Alfjorden A."/>
                <person name="Peckova H."/>
                <person name="Swords F."/>
                <person name="Hooper C."/>
                <person name="Holzer A.S."/>
                <person name="Bass D."/>
                <person name="Burki F."/>
            </authorList>
            <dbReference type="PubMed" id="38702750"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">20-A016</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JBDODL010007213">
        <property type="protein sequence ID" value="MES1923618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP001439008">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="MES1923618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP001439008"/>
        </source>
    </evidence>
    <sequence length="143" mass="15869" checksum="C742E51D2E4C6BBB" modified="2025-10-08" version="1" fragment="single">MKGNAPSDGFARLYLYNHSIDPFNPTGYLLDKNGQPMAVERHYKNGQELGILDIIGVVNAKGLQEFTVHVVDSFTNDIIQLTDRTEGATGLMIQAITSEEKTGHGLLQFENDTSQNIEFSSHYLGVDRMSLDWINSRPEAPVA</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>